ID:

dps_3363

 Coordinate:

XR_group8:7704923-7705073 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.9 -16.9 -16.9

Flybase annnotation

CDS [Dpse\GA28223-cds]; exon [dpse_GLEANR_7740:4]; intron [Dpse\GA28223-in]

No Repeatable elements found

mature
star
  1. dps_3363  XR_group8:7704946-7704967 -
  2. dps_2367  Unknown_singleton_3471:9043-9064 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCGGGGACTGGCGGCCAGCAACATCAGCGAGGATCCCAGCAGCAGCAGCGGTGAGCAAATCATGTCAAACAATCTACAGGACTCTGAAACAGCAGCAGCACCAGGAGCAGTTGCACATACATCGCGCTCGCTTGCCTCCTCACACTCCAGCTCTATTCAAGATCTCCTGTTCAGCGCCACCGAGGATCTGTTGAACACCCAGCAGGTGATAGCCAGCAACCAGCACACCATCGATCTTTTCGAGCAGGCCT
*****************************************************************************((((.((((((..((.(((((....(((((((((.((...........))..)).)).)))))....))...))))).))).)))..))))..........************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902010
ovaries
 GSM444067
head
 M062
head
 SRR902011
testis
 V112
male body		 M022
male body
.............................................................................AGGACTCTGAAACAGCAGCAGC........................................................................................................................................................ 22 0 1 5.00 5 5 0 0 0 0 0 0 0
....................................................................ACAATCTACAGGACTCTGAAACAGC.............................................................................................................................................................. 25 0 1 3.00 3 3 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCAACCAGCACACCATCGATCTTT............ 24 0 2 3.00 6 6 0 0 0 0 0 0 0
............................................................................................................................................................TCAAGATCTCCTGTTCAGCGCC......................................................................... 22 0 2 3.00 6 5 1 0 0 0 0 0 0
....................................................................ACAATCTACAGGACTCTGAAACAG............................................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0 0 0 0
.......................................................................ATCTACAGGACTCTGAAACAGCA............................................................................................................................................................. 23 0 1 2.00 2 2 0 0 0 0 0 0 0
..................................................................AAACAATCTACAGGACTCTGAAACA................................................................................................................................................................ 25 0 2 2.00 4 4 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCAACCAGCACACCATCGATCTTTT........... 25 0 2 2.00 4 4 0 0 0 0 0 0 0
.............................................................................AGGACTCTGAAACAGCAGCAGCA....................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................TACAGGACTCTGAAACAGCAGCAG......................................................................................................................................................... 24 0 1 2.00 2 1 0 1 0 0 0 0 0
....................................................................ACAATCTACAGGACTCTGAAACAGCAG............................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................................................CAGCAGCAGCACCAGGAGCAGTTG.......................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0
.......................................................................ATCTACAGGACTCTGAAACAGC.............................................................................................................................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0
.............................................................................AGGACTCTGAAACAGCAGCAGCAC...................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0
.............................................................ATGTCAAACAATCTACAGGACTCT...................................................................................................................................................................... 24 0 2 1.50 3 3 0 0 0 0 0 0 0
.............................................................ATGTCAAACAATCTACAGGACTCTGA.................................................................................................................................................................... 26 0 2 1.50 3 3 0 0 0 0 0 0 0
.....................................................................................................................................................GCTCTATTCAAGATCTCCTGTTCAGC............................................................................ 26 0 2 1.50 3 3 0 0 0 0 0 0 0
............................................................................................................................................................TCAAGATCTCCTGTTCAGCGC.......................................................................... 21 0 2 1.50 3 3 0 0 0 0 0 0 0
...............................................................................................................TGCACATACATCGCGCTCGCTTG..................................................................................................................... 23 0 2 1.50 3 3 0 0 0 0 0 0 0
..................................................................................TCTGAAACAGCAGCAGCACCA.................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TCAGCGCCACCGAGGATCTGTTGAACAA..................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................TCAGCGAGGATCCCAGCAGCAGCAG........................................................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0 0
...............................................................................GACTCTGAAACAGCAGCAGCACC..................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................CAGGACTCTGAAACAGCAGCAGCAC...................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................CCACCGAGGATCTGTTGAACAC..................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................CTCTGAAACAGCAGCAGCACCAG................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................ATCTACAGGACTCTGAAACAGCAG............................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................CTCCTGTTCAGCGCCACCGAGGATC............................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................AATCTACAGGACTCTGAAACAGC.............................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................ATGTCAAACAATCTACAGGACTC....................................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................ACCGAGGATCTGTTGAACACCCAG................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................TTGCACATACATCGCGCTCGCTTG..................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................CTCCTGTTCAGCGCCACCGCGGAT................................................................ 24 1 1 1.00 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................................CCGAGGATCTGTTGAACACCCAG................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................CGAGGATCTGTTGAACACCCAGCAGG............................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TCAGCGCCACCGAGGATCTGTTGAACA...................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................GACTCTGAAACAGCAGCAGCACCAA................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................CAATCTACAGGACTCTGAAACAG............................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................ATCTACAGGACTCTGAAACAGCAGC........................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................TCTCCTGTTCAGCGCCACCGAGGA................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................ACAATCTACAGGACTCTGAAACAGCA............................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................GCTCTATTCAAGATCTCCTGTTCAG............................................................................. 25 0 2 1.00 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................GCCACCGAGGATCTGTTGAACACCCAG................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CCAGCACACCATCGATCTTTTCGAGC...... 26 0 2 1.00 2 2 0 0 0 0 0 0 0
.......................................................................ATCTACAGGACTCTGAAACAGCAGCA.......................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................GCTCTATTCAAGATCTCCTGTTCAGCGC.......................................................................... 28 0 2 1.00 2 2 0 0 0 0 0 0 0
.............................................................................AGGACTCTGAAACAGCAGCAGCACCA.................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................AGGACTCTGAAACAGCAGCAGCACC..................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................CAAGATCTCCTGTTCAGCGCC......................................................................... 21 0 2 1.00 2 1 1 0 0 0 0 0 0
...................................................................................................................................................................................CCGAGGATCTGTTGAACACCCAGCA............................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................CTCCTGTTCAGCGCCACCGAGGA................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................CCACCGAGGATCTGTTGAACACCCA.................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................ACAATCTACAGGACTCTGAAACA................................................................................................................................................................ 23 0 2 1.00 2 2 0 0 0 0 0 0 0
................................................................................................................................................................................CCACCGAGGATCTGTTGAACACCC................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................CAATCTACAGGACTCTGAAACAGC.............................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCGATCTTTGCGGGCAGCCC. 21 3 5 0.80 4 2 0 0 0 0 0 1 1
..............................................................TGTCAAACAATCTACAGGACTCTG..................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................CAAGATCTCCTGTTCAGCGC.......................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCGATCTTTTCGAGCAGGCCT 22 0 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ACACCATCGATCTTTTCGAGCAGG... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CAGCACACCATCGATCTTTTCGAG....... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................TGCACATACATCGCGCTCGCTTGCC................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................GCTCTATTCAAGATCTCCTGTTC............................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................GATCCCAGCAGCAGCAGCGG........................................................................................................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................................................................CCTCCTCACACTCCAGCTCTATTCA............................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................................................................TCAAGATCTCCTGTTCAGCGCCA........................................................................ 23 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCAACCAGCACACCATCGATCTTTTCG......... 27 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................................................CATCGCGCTCGCTTGCCTCCT............................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...................................................................AACAATCTACAGGACTCTG..................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................................................................TCAAGATCTCCTGTTCAGCGT.......................................................................... 21 1 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................AGCTCTATTCAAGATCTCCTGTTCAGC............................................................................ 27 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGAACACCCAGCAGGTGACAGCCAGCAA................................ 28 1 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................TCATGTCAAACAATCTACAGGAC......................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................................GTTGCACATACATCGCGCTCGCT....................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
.......CTGGCGGCCAGCAACATCAG................................................................................................................................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................................TTGCACATACATCGCGCTCGCTTGC.................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................TCCTGTTCAGCGCCACCGA.................................................................... 19 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................GGATCCCAGCAGCAGCAGCGGTG...................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................TTGAACACCCAGCAGGTGATAGCCAGCA................................. 28 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................TCAGCGAGGATCCCAGCAGCA............................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................................CACCAGGAGCAGTTGCACAT..................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................GTCAAACAATCTACAGGACTCTG..................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................AGATCTCCTGTTCAGCGCCACCG..................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
............................................................................................................................................................TCAAGATCTCCTGTTCAGCGCCAC....................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................AAACAATCTACAGGACTCTGAAA.................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................AGCTCTATTAAAGATCTCCTGT................................................................................. 22 1 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCACACCATCGATCTTTTCGAGCAG.... 25 0 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................................................................................CTATTCAAGATCTCCTGTTC............................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AACCAGCACACCATCGATCTTTTCGA........ 26 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................TCCTGTTCAGCGCCACCGAG................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCAACCAGCACACCATCGATCTT............. 23 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................TGTCAAACAATCTACAGGACTCTGAAA.................................................................................................................................................................. 27 0 2 0.50 1 0 0 0 0 1 0 0 0
....................................................................ACAATCTACAGGACTCTGAAAC................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................................TTGCACATACATCGCGCTCGCTTGCC................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................GAGCAAATCATGTCAAACAATC................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................TCAGCGAGGATCCCAGCAGCAGCA............................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................TCAGCGAGGATCCCAGCAGCAGC............................................................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................TCATGTCAAACAATCTACAGGACT........................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCAACCAGCACACCATCGATC............... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................CGAGGATCCCAGCAGCAGCAGCGG........................................................................................................................................................................................................ 24 0 2 0.50 1 0 0 0 0 0 1 0 0
.....................................................................................................CAGGAGCAGTTGCACATACATCGCG............................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................GTCAAACAATCTACAGGACTCTGAAA.................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................TGCACATACATCGCGCTCGCTTGC.................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................TCAGCGAGGATCCCAGCAGCAG.............................................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................................GCACCAGGAGCAGTTGCACAT..................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................AGGTGATAGCCAGCAACCAG............................ 20 0 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................ATTCAAGATCTCCTGTTCAGCGCCAC....................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TGATAGCCAGCAACCAGCACACCATC................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................GTTGAACACCCAGCAGGTGATAGC...................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................................................................................CTATTCAAGATCTCCTGTTCAGCGCC......................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0
......................................................................................................................................................CTCTATTCAAGATCTCCTGTTCAGCGC.......................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................AAACAATCTACAGGACTCTGAAAC................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................AGCTCTATTCAAGATCTCCTG.................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................TGCACATACATCGCGCTCGCT....................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................................................ATGTCAAACAATCTACAGGACTCTGAAA.................................................................................................................................................................. 28 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ATCGATCTTTGCGGGCAGCC.. 20 3 17 0.24 4 3 0 0 0 0 0 1 0
..................................................GTGCGCAAATCATGTCGAAG..................................................................................................................................................................................... 20 3 11 0.09 1 1 0 0 0 0 0 0 0
...................................................TGCGCAAATCATGTCGAAG..................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AACGAGAACACGATCGATC............... 19 3 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

CGCCCCTGACCGCCGGTCGTTGTAGTCGCTCCTAGGGTCGTCGTCGTCGCCACTCGTTTAGTACAGTTTGTTAGATGTCCTGAGACTTTGTCGTCGTCGTGGTCCTCGTCAACGTGTATGTAGCGCGAGCGAACGGAGGAGTGTGAGGTCGAGATAAGTTCTAGAGGACAAGTCGCGGTGGCTCCTAGACAACTTGTGGGTCGTCCACTATCGGTCGTTGGTCGTGTGGTAGCTAGAAAAGCTCGTCCGGA
*************************************************************************((((.((((((..((.(((((....(((((((((.((...........))..)).)).)))))....))...))))).))).)))..))))..........***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM343916
embryo
 M059
embryo
 GSM444067
head
....................................................................................................................................................TCGAGATAAGTTCTAGAGGACAAGT.............................................................................. 25 0 2 7.00 14 11 3 0 0 0
.........................................................................................................................................................................................................CGTCCACTATCGGTCGTTGGTCGT.......................... 24 0 2 5.00 10 10 0 0 0 0
............................................CGTCGCCACTCGTTTAGTACAGTTTGT.................................................................................................................................................................................... 27 0 2 5.00 10 10 0 0 0 0
..........................................................................................................................................................................................................GTCCACTATCGGTCGTTGGTCGT.......................... 23 0 2 5.00 10 9 1 0 0 0
.....................................................................................................................................................CGAGATAAGTTCTAGAGGACAAGT.............................................................................. 24 0 2 4.00 8 8 0 0 0 0
.......................................................................................................................GTAGCGCGAGCGAACGGAGGAGTGT........................................................................................................... 25 0 2 4.00 8 8 0 0 0 0
..................GTTGTAGTCGCTCCTAGGGTCGT.................................................................................................................................................................................................................. 23 0 2 4.00 8 8 0 0 0 0
...............................................CGCCACTCGTTTAGTACAGTTTGT.................................................................................................................................................................................... 24 0 2 3.50 7 7 0 0 0 0
......................................................................................................................................................GAGATAAGTTCTAGAGGACAAGT.............................................................................. 23 0 2 3.50 7 7 0 0 0 0
...............................................................................................................................................TGAGGTCGAGATAAGTTCTAGAG..................................................................................... 23 0 2 2.50 5 5 0 0 0 0
..............................................................................................................................................................................................................................CGTGTGGTAGCTAGAAAAGCTCGT..... 24 0 2 2.00 4 4 0 0 0 0
.......................................................................................................................................GAGGAGTGTGAGGTCGAGATAAG............................................................................................. 23 0 2 1.50 3 2 1 0 0 0
..............................................................ACAGTTTGTTAGATGTCCTGAGACTTT.................................................................................................................................................................. 27 0 2 1.50 3 3 0 0 0 0
..........CGCCGGTCGTTGTAGTCGCTCCT.......................................................................................................................................................................................................................... 23 0 2 1.50 3 3 0 0 0 0
.....................................................................................................................................................CGAGATAAGTTCTAGAGGACAAG............................................................................... 23 0 2 1.50 3 3 0 0 0 0
.............................................GTCGCCACTCGTTTAGTACAGTTTGT.................................................................................................................................................................................... 26 0 2 1.50 3 3 0 0 0 0
....................................................................................................................................................TCGAGATAAGTTCTAGAGGACAAG............................................................................... 24 0 2 1.50 3 3 0 0 0 0
................................................GCCACTCGTTTAGTACAGTTTG..................................................................................................................................................................................... 22 0 2 1.50 3 3 0 0 0 0
.......................................................................................................................................................................................................GTCGTCCACTATCGGTCGTTGGTCGT.......................... 26 0 2 1.50 3 3 0 0 0 0
.................CGTTGTAGTCGCTCCTAGGGTCGT.................................................................................................................................................................................................................. 24 0 2 1.50 3 3 0 0 0 0
.........................................................................................................................................GGAGTGTGAGGTCGAGATAAGTT........................................................................................... 23 0 2 1.50 3 3 0 0 0 0
............CCGGTCGTTGTAGTCGCTCCT.......................................................................................................................................................................................................................... 21 0 2 1.50 3 3 0 0 0 0
....................................................................................................................................................TCGAGATAAGTTCTAGAGGACAAGTC............................................................................. 26 0 2 1.00 2 2 0 0 0 0
.............................................................................................................................................................................CGCGGTGGCTCCTAGACAACTTGTGGGT.................................................. 28 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................AGGACAAGTCGCGGTGGCTCC.................................................................. 21 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................GGTCGTGTGGTAGCTAGAAAAGCTCGT..... 27 0 2 1.00 2 2 0 0 0 0
.....................GTAGTCGCTCCTAGGGTCGT.................................................................................................................................................................................................................. 20 0 2 1.00 2 0 1 1 0 0
..............................................................ACAGTTTGTTAGATGTCCTGAGACT.................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0
..............................................................................................CGTCGTGGTCCTCGTCAACGTGTAT.................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0
.......GACCGCCGGTCGTTGTAGTCGCTCCT.......................................................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
..............................................TCGCCACTCGTTTAGTACAGTTTGT.................................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0
........................................................................................................................................................................................GTAGACAACTTGTGGGGCG................................................ 19 2 1 1.00 1 1 0 0 0 0
..........................................................................................................................................GAGTGTGAGGTCGAGATAAG............................................................................................. 20 0 2 1.00 2 2 0 0 0 0
..........................................................................ATGTCCTGAGACTTTGTCGT............................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
................................................GCCACTCGTTTAGTACAGTTTGT.................................................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0
............................................CGTCGCCACTCGTTTAGTACAGT........................................................................................................................................................................................ 23 0 2 1.00 2 2 0 0 0 0
...............................................................................................................................................TGAGGTCGAGATAAGTTCTAGAGG.................................................................................... 24 0 2 1.00 2 2 0 0 0 0
...............................................CGCCACTCGTTTAGTACAGTTTG..................................................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0
.............................................................................................................................................................................CGCGGTGGCTCCTAGACAACTTGTGGG................................................... 27 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................TGGTCGTGTGGTAGCTAGAAAAGCTCGT..... 28 0 2 1.00 2 2 0 0 0 0
............................................................................................................................................................................................................CCACTATCGGTCGTTGGTCGT.......................... 21 0 2 1.00 2 2 0 0 0 0
.........................................................................................................................................GGAGTGTGAGGTCGAGATAAGT............................................................................................ 22 0 2 1.00 2 2 0 0 0 0
............................................................................................................................................................................TCGCGGTGGCTCCTAGACAACTTGT...................................................... 25 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................GTGAGGTCGAGATAAGTTCTAGAG..................................................................................... 24 0 2 1.00 2 1 0 1 0 0
.......................................................................................................................................GAGGAGTGTGAGGTCGATATAAGT............................................................................................ 24 1 2 1.00 2 2 0 0 0 0
............................................................................................................................................................................................................................GTCGTGTGGTAGCTAGAAAAG.......... 21 0 2 1.00 2 2 0 0 0 0
...............................................CGCCACTCGTTTAGTACAGTTTGTTAGAT............................................................................................................................................................................... 29 0 2 1.00 2 2 0 0 0 0
..........................................................................................................................................................................................AGACAACTTGTGGGTCGTCCACTAT........................................ 25 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................CGCGGTGGCTCCTAGACAACTTGTGG.................................................... 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................TGGTCGTGTGGTAGCTAGAAAAG.......... 23 0 2 1.00 2 2 0 0 0 0
................................................................................................................................................................................................................................TGTGGTAGCTAGAAAAGCTCGT..... 22 0 2 1.00 2 1 1 0 0 0
................................................................................................................................................................CTAGAGGACAAGTCGCGGTGGCTCC.................................................................. 25 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................GTCCACTATCGGTCGTTGGTCGTGT........................ 25 0 2 1.00 2 2 0 0 0 0
..........CGCCGGTCGTTGTAGTCGCTT............................................................................................................................................................................................................................ 21 1 2 1.00 2 2 0 0 0 0
........................................................................................................................................................................................................................GTTGGTCGTGTGGTAGCTAG............... 20 0 2 1.00 2 2 0 0 0 0
..................................................................................................................................................................................................TGTGGGTCGTCCACTATCGGTCGT................................. 24 0 2 1.00 2 2 0 0 0 0
..........................................................................................................................................................................................................GTCCACTATCGGTCGTTGGTCG........................... 22 0 2 1.00 2 2 0 0 0 0
................................................................................................TCGTGGTCCTCGTCAACGTGT...................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................................GTCGTGTGGTAGCTAGAAAA........... 20 0 2 0.50 1 1 0 0 0 0
...........................................................AGTACAGTTTGTTAGATGTCCTGAGAC..................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
..............................................................................................................................................................................................................................CGTGTGGTAGCTAGAAAAGCTCG...... 23 0 2 0.50 1 1 0 0 0 0
...........GCCGGTCGTTGTAGTCGCTCCT.......................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
................TCGTTGTAGTCGCTCCTAGGGT..................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................AGGAGTGTGAGGTCGAGATAAG............................................................................................. 22 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................TAAGTTCTAGAGGACAAGTCGCGG......................................................................... 24 0 2 0.50 1 1 0 0 0 0
.............................................................................................................................................TGTGAGGTCGAGATAAGTT........................................................................................... 19 0 2 0.50 1 1 0 0 0 0
.............................................................................................................CAACGTGTATGTAGCGCGAGCGAAC..................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................GGAGTGTGATGTCGAGATAAG............................................................................................. 21 1 2 0.50 1 1 0 0 0 0
............CCGGTCGTTGTAGTCGCTCCTAGGGT..................................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
.......................................................GTTTAGTACAGTTTGTTAGATGT............................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
...............................................................................................GTCGTGGTCCTCGTCAACGTGTATGT.................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................AGGAGTGTGAGGTCGAGATAAGTT........................................................................................... 24 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................ACGGAGGAGTGTGAGGTCGAGATAAG............................................................................................. 26 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................GTCGTCCACTATCGGTCGTTGGTCGTGT........................ 28 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................................................CGTCCACTATCGGTCGTTGGTCGTGT........................ 26 0 2 0.50 1 1 0 0 0 0
..............................................................................................CGTCGTGGTCCTCGTCAACGTGTATGT.................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
......................................................CGTTTAGTACAGTTTGTTAGATG.............................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
............................................CGTCGCCACTCGTTTAGTAC........................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................................................GGTCGTGTGGTAGCTAGAAAAGCT........ 24 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................GGAGGAGTGTGAGGTCGAGATAAGT............................................................................................ 25 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................AGGAGTGTGAGGTCGAGATAAGT............................................................................................ 23 0 2 0.50 1 1 0 0 0 0
..............................................................................................................................................................................................................................CGTGTGGTAGCTAGAAAAGC......... 20 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................GTGTGAGGTCGAGATAAGTTC.......................................................................................... 21 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................GAGGTCGAGATAAGTTCTAGAGGAC.................................................................................. 25 0 2 0.50 1 1 0 0 0 0
....................................................................................................GGTCCTCGTCAACGTGTATGTAG................................................................................................................................ 23 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................TTCGTCCACTATCGGTCGTTGGTCGT.......................... 26 1 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................................GTCGTGTGGTAGCTAGAAAAGCTCGT..... 26 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................ATCCACTATCGGTCGTTGGTCGT.......................... 23 1 2 0.50 1 1 0 0 0 0
....................................................................................................................................................TCGAGAGACGTTCTAGAGCACA................................................................................. 22 3 2 0.50 1 0 0 1 0 0
..................................................CACTCGTTTAGTACAGTTTGT.................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................GTCGTCCACTATCGGTCGTTGG.............................. 22 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................AGAGGACAAGTCGCGGTGGC..................................................................... 20 0 2 0.50 1 1 0 0 0 0
...............GTCGTTGTAGTCGCTCCTAGGGTCGT.................................................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
..............................................TCGCCACTCGTTTAGTACAG......................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
...........GCCGGTCGTTGTAGTCGCTCCTAGGGT..................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................GGAGTGTGAGGTCGAGATAAGTTCT......................................................................................... 25 0 2 0.50 1 0 1 0 0 0
.................................................................................................................GTGTATGTAGCGCGAGCGAACGGAG................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
.................................................................................................CGTGGTCCTCGTCAACGTGTATG................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................................CGTTGGTCGTGTGGTAGCTAG............... 21 0 2 0.50 1 1 0 0 0 0
....................................................CTCGTTTAGTACAGTTTGTTAGAT............................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.............CGGTCGTTGTAGTCGCTCCTAGGGT..................................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................GAGGAGTGAGAGGTCGAGATAAG............................................................................................. 23 1 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................................................ATCGTGTGGTAGCTAGAAAAGCTCGT..... 26 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................................................CGTCCACTATCGGTCGTTGG.............................. 20 0 2 0.50 1 1 0 0 0 0
........................................................................................................CTCGTCAACGTGTATGTAGCGCG............................................................................................................................ 23 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................TAAGTTCTAGAGGACAAGTCGCGGT........................................................................ 25 0 2 0.50 1 1 0 0 0 0
............................................CGTCGCCACTCGTTTAGTACAG......................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................CGAGATAAGTTCTAGAGGACAAGTC............................................................................. 25 0 2 0.50 1 1 0 0 0 0
.........................................TGTCGTCGCCACTCGTTTAGTACAGTTT...................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................AGCGCGAGCGAACGGAGGAGTGT........................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................TTGTGGGTCGTCCACTATCGGTCGT................................. 25 0 2 0.50 1 1 0 0 0 0
............................................CCTCGCCACTCGTTTAGTACAGTTTGT.................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................GTCGTCCACTATCGGTCGTTGGTCG........................... 25 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................GGGTCGTCCACTATCGGTCGTTGGTC............................ 26 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................GGTCGTTGGTCGTGTGGTA.................... 19 0 2 0.50 1 1 0 0 0 0
............................................CGTCGCCACTCGTTTAGTACAGTTTG..................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
............................................CGTCGCCACTCGTTTAGTACAGTTTT..................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
...............................................CGCCACTCGTTTAGTACAGTTTGTAGAA................................................................................................................................................................................ 28 3 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................................GTTGGTCGTGTGGTAGCTAGAAAAG.......... 25 0 2 0.50 1 1 0 0 0 0
..................................................CACTCGTTTAGTACAGTTTGTTAGATG.............................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
......................................................CGTTTAGTACAGTTTGTTAGATGT............................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................AGTGTGAGGTCGAGATAAGTTC.......................................................................................... 22 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................ACTTGTGGGTCGTCCACTATCGGTCGT................................. 27 0 2 0.50 1 1 0 0 0 0
..................................................................................................GTGGTCCTCGTCAACGTGTATG................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................GAGTGTGAGGTCGAGATAAGT............................................................................................ 21 0 2 0.50 1 1 0 0 0 0
.................CGTTGTAGTCGCTCCTAGGGT..................................................................................................................................................................................................................... 21 0 2 0.50 1 0 0 0 1 0
..................GTTGTAGTCGCTCCTAGGTTCGT.................................................................................................................................................................................................................. 23 1 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................GGTCGTTGGTCGTGTGGTAG................... 20 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................................GGTCGTTGGTCGTGTGGT..................... 18 0 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................................................GTTGGTCGTGTGTTAGCTAG............... 20 1 2 0.50 1 1 0 0 0 0
..........TGCCGGTCGTTGTAGTCGCTCCT.......................................................................................................................................................................................................................... 23 1 2 0.50 1 1 0 0 0 0
......................................................................................................................................GGAGGAGTGTGAGGTCGAGATAAG............................................................................................. 24 0 2 0.50 1 1 0 0 0 0
................................................................................................................CGTGTATGTAGCGCGAGCGAACGGA.................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................AGGTCGAGATAAGTTCTAGAGGAC.................................................................................. 24 0 2 0.50 1 1 0 0 0 0
...............................................CGCCACTCGTTTAGTACAGTTTGTT................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
..................................................................................................GTGGTCCTCGTCAACGTGTATGT.................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................................................GTGGTAGCTAGAAAAGCTCGT..... 21 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................................CGTTGGTCGTGTGGTAGCTAGAAA............ 24 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................................................ATCGGTCGTTGGTCGTGTGGTAGCT................. 25 0 2 0.50 1 1 0 0 0 0
.................CGTTGTAGTCGCTCCTAGGTTCGT.................................................................................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................GGAGTGTGAGGTCGAGATAAGTTC.......................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.........................TCGCTCCTAGGGTCGTCGTCGT............................................................................................................................................................................................................ 22 0 2 0.50 1 1 0 0 0 0
.................................................CCACTCGTTTAGTACAGTTTGTTAGAT............................................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................................................CGTTGGTCGTGTGGTAGC.................. 18 0 3 0.33 1 1 0 0 0 0
.............................TCCGAGTGTCGTCGTCGTCGCC........................................................................................................................................................................................................ 22 2 5 0.20 1 0 0 0 0 1
...............................................................................................................................................................................................................CAATGGGTCGTAGGTCGTGTG....................... 21 3 6 0.17 1 1 0 0 0 0
.....................GAAGTCGCGCCTAGGGTC.................................................................................................................................................................................................................... 18 2 9 0.11 1 1 0 0 0 0
.....................................................................................................GTCCTCGGCAAGGCGTATG................................................................................................................................... 19 3 13 0.08 1 1 0 0 0 0
..........................................................................................................................GTGCGAGTGCACGGAGGAGT............................................................................................................. 20 3 15 0.07 1 1 0 0 0 0
....................................................................................................................................................................................................................GGTCATGGGTCGCGTGGTAG................... 20 3 17 0.06 1 1 0 0 0 0
................................................................................................................................................................................................................TCTCGGTCGTTGGTGGTATG....................... 20 3 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................................GGCGTGGGTCGTGTGGTA.................... 18 2 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group8:7704873-7705123 - dps_3363 GCGGGGACTGGCGGCCAGCAACATCAGCG---AGGATCC------CAGCA------GCA---GCAGCGGTGAGCAAATCATGTCAAACAATCTACAGGACTCTGAA------------------------ACAGCAGCAGCACCAGGAGCAGTTG------------------------------------------------------------CACATACATCGCGCTCGCTTGC---------CTC---CTCAC---ACTCCAGCTCTATTCAAGATCTCCTGTTCAGCG---CCACCGAGGATCTGTTGAACAC---CCAGCAGGTGATA---------GCCAGCAACCAGCACACCATCGATCTTTTCGAGCAGGCCT
droPer2 scaffold_48:483322-483572 - GCGGGGACTGGCGGCCAGCAACATCAGCG---AGGATGC------CAGCA------GCA---GCAGCGGTGAGCAAATCATGTCAAACAATCTACAGGACTCTGAA------------------------ACAGCAGCAGCACCAGGAGCAGTTG------------------------------------------------------------CACATACATCGCGCTCGCTTGC---------CTC---CTCAC---ACTCCAGCTCTATTCAAGATCTCCTGTTCAGCG---CCACCGAGGATCTGTTGAACAC---CCAGCAGGTGATA---------GCCAGCAACCAGCACACCATCGATCTTTTCGAGCAGGCCT
droWil2 scf2_1100000004762:4756024-4756274 - dwi_2040 ACGTGGCTTGACCTCCAGCAATATAAGTG---ATGATCCTGCTGCCACTA------------TAAGCGGTGAGCAACA--ACAACA--------------ACAACT------------------------AC------AACAACTAGAGCAGGTGAACAA-----------------------------------------------------------TCCAAATCAATCCTCTGCCTCTATAGCCTC---CTCTTCGTCGCCACATTCCATGCAAGATCTCATGTATATGGTATCAACTGAAGATCTTTTGGATACCACACAACAGGTGATA---------GCAACCAATCAGCATACCATAGATCTCTTCGAGCAGGCCT
droVir3 scaffold_13049:13211781-13212058 - dvi_19773 CCGTGGCCTGGCCGCCAGCAACATCAGTG---ACAGCGC------CAATG------ATC---TGAGCGGTGAGCAAACCTACTCC---AATCCACAAACATCCAAC------------------------ACAACAGGTGCAG---------------AACCGCAGACGCAGGGTACTAGTACGGGTATGGGT---------------GCTATTGC---TGCTGCCCGTTCGCTTGC---------CTC---CTCGC---ACTCGAATTCCATACAGGATCTCATGCTCAGCG---CCACTGAGGATTTGCTGGACACCACACAACAGGTCATT---------GAGACCAATCAACATACCATAGATCTCTTCGAGCAGGCCT
droMoj3 scaffold_6680:14151579-14151871 + GCGCGGCCTGGCCGCCAGCAACATCAGCG---ACAGCGT------CAACG------ACC---TAAGCGGTGAGCAAATCTACTCC---AATCCACACACAGCCAAC------------------------ACAGCAGGTGCAACAGG------TGATGAGCAGCAGTC---------AGGTGCGGGTGTGGGTCTGGGTCTGGGCTTGGGTGTTGC---TGCCACGCGTTCGCTTGC---------CTC---CTCGC---ACTCGAATTCCATACAGGATCTCATGCGCAGCG---CCACAGAGGATCTGCTGGACACCACGCAACAGGTGATC---------GAGACCAATCAACATACCATAGATCTCTTCGAGCAGGCCT
droGri2 scaffold_15110:18650606-18650877 - dgr_337 TCGTGGATTGGCGGCCAGCAATATTAGCAGTGACAGCGC------CAGTG------ACT---TGAGTGGTGAGCTAATC---TACACAAATCCACAATCCTCCAATCCAAACCAGACATCATCATCATCATCAGCAGCAGCAGCAGC---GGT------------------------------------------------------------------TGTTGTTGGTTCGCTTGC---------CTCAAACTCGC---ACTCGAATTCCATACAGGATCTGATGCTGAGCG---CAACGGAGGATTTGCTGGACACCACACAGCAGGTGATC---------GAGACCAATCAGCATTCCATAGATCTCTTCGAGCAGGCCT
droAna3 scaffold_13337:17257817-17258013 + CAGAGGACTGGCGGCCAGCAACATCAGCG---AAGATCC------C------------------AGCGGTGAGCAAATCCAATCCACAGATCCTCAAGA------------------------------------------------------------------------------------------------------------------------AGCAGGACGCTCGCCTGC---------CTC---CTCTC---CCCCCAACTCCATACAAGATCTCAT------------CACAGAGGACTTGCGGAATAC---CCAGCAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCT
droBip1 scf7180000396741:554377-554582 + CAGAGGGTTGGCGGCCAGCAACATCAGCG---AAGATCC------C------------------AGCGGTGAGCAAATCCAATCCACAGATCCACAGGA------------------------------------------------------------------------------------------------------------------------AGCGGGACGCTCGCCTGC---------CTC---CTCGCC---GCCCAATTCCATACAAGATCTCAT------------CACGGAGAACTTGCACACCCT---CCAGCACACCATCCAGCACATCCAGAACAACCAGCACACCATCGATCTCTTCGAGCAGGCCT
droKik1 scf7180000302694:179124-179341 - CCGAGGATTGGCAGCCAGCAACATCAGCG---ATGACCC------CAGCAGCAGCAGCAGTAGCAGCGGTGAGCAAACCAATCCCACAAATCCGCAGAT------------------------------------------------------------------------------------------------------------------------CGCCGGACGCTCGCCTGC---------CTC---CTCGCCGCCCTCAAGTTCGATTCAGGATCTCAT------------CACGCAAGACTTGAGAAACAC---ACAGCAGGTGATT---------GCCCACAATCAGCACACCATAGATCTCTTCGAGCAGGCCT
droFic1 scf7180000453831:190055-190260 - CCGGGGACTGGCAGCCAGCAACATCAGCG---ATGATTC------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTTACAGGA------------------------------------------------------------------------------------------------------------------------TGCAGGACGCTCGCCTGT---------CTC---CGCTTCTGGCTCAAGTTCCATGCAGGATCTGAT------------CACGCGGGACCTGAGGAACAC---ACAGCAGGTGATT---------GCCCACAATCAGCACACCATCGATCTCTTCGAGCAGGCCT
droEle1 scf7180000491249:6938509-6938723 - CCGTGGCTTGGCGGCCAGCAACATCAGCG---ACGATCC------CAGCAGCAGCAGCA---GCAGCGGTGAGCAAACCAACTCCACAAATCCACAGGA------------------------------------------------------------------------------------------------------------------------CGCAGGACGCTCGCCTGC---------CTC---CTCGCCTGCCTCGAGTTCCATGCAGGATCTGAT------------CACGCGGGACCTGCGGAACAC---CCAGCAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCT
droBia1 scf7180000302377:1972121-1972332 + ACGTGGATTTGCAGCTAGTAACATCAGCG---ACGATCCGAGCAGCAGCA------------GCAGCGGTGAGCAAACCAACTCCACAAACCCACAGGA------------------------------------------------------------------------------------------------------------------------TACAGGGCGCTCGCCTGC---------CTC---CTCACCTGCCTCGAGTTCCATGCAAGACCTGAT------------CTCGCGGGACCTGAGAAACAC---CCAACAGGTGATC---------GCCCACAATCAACACACCATTGATCTCTTCGAGCAGGCCT
droTak1 scf7180000412525:12212-12426 - CCGGGGATTAGCAGCCAGCAACATCAGTG---ACGATCC------AAGCAGCAGCAGCA---GCAGCGGTGAGCAAACCAACTCTACAAACCCACAGGA------------------------------------------------------------------------------------------------------------------------TGAAGGACGCTCGCCTGC---------CTC---CCCGCCTGCCTCGAGTTCCATGCAAGACCTGAT------------AACCCGGGACCTGAGGAACAC---CCAACAGGTTATT---------GCCCACAATCAGCACACCATCGATCTCTTTGAGCAGGCCT
droEug1 scf7180000409472:182415-182620 - AAGGGGACTGGCAGCTAGTAACATCAGCG---ACGATCC------CAGCA------------GCAGCGGTGAGCAAACCAACTCCACAAATCCACAAGA------------------------------------------------------------------------------------------------------------------------AACAGGACGCTCGCCTGC---------CTC---CTCACCTGCCCCTAGTTCCATGCAGGATCTGAT------------CAGGCGGGACCTGAGGAACAC---CCAACAGGTTATT---------GCCCATAATCAGCACACAATCGATCTCTTCGAGCAGGCCT
dm3 chr3L:19632825-19633030 - TCGGGGACTGACGGCTAGCAATCTCAACG---ATGATCT------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---CTCGCCTGCCTCAAGTTCCATGCAGGATCTGAT------------CACGCGTGACCTGAGGAACAC---CCAACAGGTGATT---------GCCCACAACCAGCACACCATTGATCTCTTCGAGCAGGCCT
droSim2 3l:19283401-19283609 - dsi_3161 TCGGGGACTCACGGCTAGCAATCTCAGCAACGACGATCT------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---CTCGCCTGCCTCAAGTTCCATGGAGGATCTGAT------------CACGCGTGACCTGAGGAACAC---CCAACAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCT
droSec2 scaffold_29:335689-335897 - TCGGGGACTCACGGCTAGCAATCTCAGCAACGACGATCT------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---CTCGCCTGCCTCAAGTTCCATGCAGGATCTGAT------------CACGCGTGACCTGAGGAACAC---CCAACAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCT
droYak3 3L:20911494-20911699 + dya_845 TCGAGGACTGACAGCTAGCAATCTCAACG---ACGATCT------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---CTCTCCTGCCTCGAGTTCCATGCAGGATCTGAT------------CACGCGTGACCTGAGGAACAC---CCAACAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCT
droEre2 scaffold_4784:19431041-19431246 - der_860 TCGGGGACTGACAGCTAGCAATCTCAACG---ACGATCT------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---CTCACCTGCCTCAAGTTCCATGCAGGATCTGAT------------CACGCGTGACCTGAGGAACAC---CCAACAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCGGGGACTGGCGGCCAGCAACATCAGCG---AGGATCC------CAGCA------GCA---GCAGCGGTGAGCAAATCATGTCAAACAATCTACAGGACTCTGAA------------------------ACAGCAGCAGCACCAGGAGCAGTTG------------------------------------------------------------CACATACATCGCGCTCGCTTGC---------CTC---CTCAC---ACTCCAGCTCTATTCAAGATCTCCTGTTCAGCG---CCACCGAGGATCTGTTGAACAC---CCAGCAGGTGATA---------GCCAGCAACCAGCACACCATCGATCTTTTCGAGCAGGCCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................AGGACTCTGAA------------------------ACAGCAGCAGC..................................................................................................................................................................................................................................................2215.0050500000000
......................................................................................ACAATCTACAGGACTCTGAA------------------------ACAGC........................................................................................................................................................................................................................................................2513.0030300000000
...........................................................................................................................................................................................................................................................................................................................................................GCAACCAGCACACCATCGATCTTT............2423.0060600000000
.................................................................................................................................................................................................................................................................................TCAAGATCTCCTGTTCAGCG---CC.....................................................................................2223.0060510000000
......................................................................................ACAATCTACAGGACTCTGAA------------------------ACAG.........................................................................................................................................................................................................................................................2413.0030300000000
.........................................................................................ATCTACAGGACTCTGAA------------------------ACAGCA.......................................................................................................................................................................................................................................................2312.0020200000000
....................................................................................AAACAATCTACAGGACTCTGAA------------------------ACA..........................................................................................................................................................................................................................................................2522.0040400000000
...........................................................................................................................................................................................................................................................................................................................................................GCAACCAGCACACCATCGATCTTTT...........2522.0040400000000
...............................................................................................AGGACTCTGAA------------------------ACAGCAGCAGCA.................................................................................................................................................................................................................................................2312.0020200000000
............................................................................................TACAGGACTCTGAA------------------------ACAGCAGCAG...................................................................................................................................................................................................................................................2412.0020100000100
......................................................................................ACAATCTACAGGACTCTGAA------------------------ACAGCAG......................................................................................................................................................................................................................................................2712.0020200000000
...................................................................................................................................CAGCAGCAGCACCAGGAGCAGTTG------------------------------------------------------------........................................................................................................................................................................2412.0020200000000
.........................................................................................ATCTACAGGACTCTGAA------------------------ACAGC........................................................................................................................................................................................................................................................2212.0020200000000
...............................................................................................AGGACTCTGAA------------------------ACAGCAGCAGCAC................................................................................................................................................................................................................................................2412.0020200000000
...............................................................................ATGTCAAACAATCTACAGGACTCT........................................................................................................................................................................................................................................................................................2421.5030300000000
...............................................................................ATGTCAAACAATCTACAGGACTCTGA......................................................................................................................................................................................................................................................................................2621.5030300000000
..........................................................................................................................................................................................................................................................................GCTCTATTCAAGATCTCCTGTTCAGC...........................................................................................2621.5030300000000
.................................................................................................................................................................................................................................................................................TCAAGATCTCCTGTTCAGCG---C......................................................................................2121.5030300000000
.........................................................................................................................................................TG------------------------------------------------------------CACATACATCGCGCTCGCTTG...................................................................................................................................................2321.5030300000000
....................................................................................................TCTGAA------------------------ACAGCAGCAGCACCA..............................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................TCAGCG---CCACCGAGGATCTGTTGAACAA---..............................................................2811.0010100000000
.......................TCAGCG---AGGATCC------CAGCA------GCA---GCAG.............................................................................................................................................................................................................................................................................................................................2521.0020200000000
.................................................................................................GACTCTGAA------------------------ACAGCAGCAGCACC...............................................................................................................................................................................................................................................2311.0010100000000
..............................................................................................CAGGACTCTGAA------------------------ACAGCAGCAGCAC................................................................................................................................................................................................................................................2511.0010100000000
........................................................................................................................................................................................................................................................................................................CCACCGAGGATCTGTTGAACAC---..............................................................2211.0010100000000
...................................................................................................CTCTGAA------------------------ACAGCAGCAGCACCAG.............................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................ATCTACAGGACTCTGAA------------------------ACAGCAG......................................................................................................................................................................................................................................................2411.0010100000000
........................................................................................................................................................................................................................................................................................CTCCTGTTCAGCG---CCACCGAGGATC...........................................................................2511.0010100000000
........................................................................................AATCTACAGGACTCTGAA------------------------ACAGC........................................................................................................................................................................................................................................................2311.0010100000000
...............................................................................ATGTCAAACAATCTACAGGACTC.........................................................................................................................................................................................................................................................................................2321.0020200000000
..........................................................................................................................................................................................................................................................................................................ACCGAGGATCTGTTGAACAC---CCAG..........................................................2411.0010100000000
........................................................................................................................................................TTG------------------------------------------------------------CACATACATCGCGCTCGCTTG...................................................................................................................................................2421.0020200000000
...........................................................................................................................................................................................................................................................................................................CCGAGGATCTGTTGAACAC---CCAG..........................................................2311.0010100000000
............................................................................................................................................................................................................................................................................................................CGAGGATCTGTTGAACAC---CCAGCAGG......................................................2611.0010100000000
...............................................................................................................................................................................................................................................................................................TCAGCG---CCACCGAGGATCTGTTGAACA..................................................................2711.0010100000000
.................................................................................................GACTCTGAA------------------------ACAGCAGCAGCACCAA.............................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................CAATCTACAGGACTCTGAA------------------------ACAG.........................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................ATCTACAGGACTCTGAA------------------------ACAGCAGC.....................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................................TCTCCTGTTCAGCG---CCACCGAGGA.............................................................................2411.0010100000000
......................................................................................ACAATCTACAGGACTCTGAA------------------------ACAGCA.......................................................................................................................................................................................................................................................2611.0010100000000
..........................................................................................................................................................................................................................................................................GCTCTATTCAAGATCTCCTGTTCAG............................................................................................2521.0020200000000
....................................................................................................................................................................................................................................................................................................G---CCACCGAGGATCTGTTGAACAC---CCAG..........................................................2711.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................CCAGCACACCATCGATCTTTTCGAGC......2621.0020200000000
.........................................................................................ATCTACAGGACTCTGAA------------------------ACAGCAGCA....................................................................................................................................................................................................................................................2611.0010100000000
..........................................................................................................................................................................................................................................................................GCTCTATTCAAGATCTCCTGTTCAGCG---C......................................................................................2821.0020200000000
...............................................................................................AGGACTCTGAA------------------------ACAGCAGCAGCACCA..............................................................................................................................................................................................................................................2611.0010100000000
...............................................................................................AGGACTCTGAA------------------------ACAGCAGCAGCACC...............................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................CAAGATCTCCTGTTCAGCG---CC.....................................................................................2121.0020110000000
...........................................................................................................................................................................................................................................................................................................CCGAGGATCTGTTGAACAC---CCAGCA........................................................2511.0010100000000
........................................................................................................................................................................................................................................................................................CTCCTGTTCAGCG---CCACCGAGGA.............................................................................2311.0010100000000
........................................................................................................................................................................................................................................................................................................CCACCGAGGATCTGTTGAACAC---CCA...........................................................2511.0010100000000
......................................................................................ACAATCTACAGGACTCTGAA------------------------ACA..........................................................................................................................................................................................................................................................2321.0020200000000
........................................................................................................................................................................................................................................................................................................CCACCGAGGATCTGTTGAACAC---CC............................................................2411.0010100000000
.......................................................................................CAATCTACAGGACTCTGAA------------------------ACAGC........................................................................................................................................................................................................................................................2411.0010100000000
................................................................................TGTCAAACAATCTACAGGACTCTG.......................................................................................................................................................................................................................................................................................2420.5010100000000
..................................................................................................................................................................................................................................................................................CAAGATCTCCTGTTCAGCG---C......................................................................................2020.5010100000000
.........................................................................................................................................................................................................................................................................................................................................................................ATCGATCTTTTCGAGCAGGCCT2220.5010100000000
....................................................................................................................................................................................................................................................................................................................................................................ACACCATCGATCTTTTCGAGCAGG...2420.5010100000000
................................................................................................................................................................................................................................................................................................................................................................CAGCACACCATCGATCTTTTCGAG.......2420.5010100000000
.........................................................................................................................................................TG------------------------------------------------------------CACATACATCGCGCTCGCTTGC---------C........................................................................................................................................2520.5010100000000
..........................................................................................................................................................................................................................................................................GCTCTATTCAAGATCTCCTGTTC..............................................................................................2320.5010100000000
..................................GATCC------CAGCA------GCA---GCAGCGG..........................................................................................................................................................................................................................................................................................................................2020.5010100000000
............................................................................................................................................................................................................................................C---------CTC---CTCAC---ACTCCAGCTCTATTCA...........................................................................................................2520.5010100000000
.................................................................................................................................................................................................................................................................................TCAAGATCTCCTGTTCAGCG---CCA....................................................................................2320.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................GCAACCAGCACACCATCGATCTTTTCG.........2720.5010100000000
.............................................................................................................................................................................................................................CATCGCGCTCGCTTGC---------CTC---CT.................................................................................................................................2120.5010100000000
.....................................................................................AACAATCTACAGGACTCTG.......................................................................................................................................................................................................................................................................................1920.5010100000000
.................................................................................................................................................................................................................................................................................TCAAGATCTCCTGTTCAGCG---T......................................................................................2120.5010100000000
.........................................................................................................................................................................................................................................................................AGCTCTATTCAAGATCTCCTGTTCAGC...........................................................................................2720.5010100000000
.............................................................................TCATGTCAAACAATCTACAGGAC...........................................................................................................................................................................................................................................................................................2320.5010100000000
.......................................................................................................................................................GTTG------------------------------------------------------------CACATACATCGCGCTCGCT.....................................................................................................................................................2320.5010100000000
.......CTGGCGGCCAGCAACATCAG....................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
........................................................................................................................................................TTG------------------------------------------------------------CACATACATCGCGCTCGCTTGC---------.........................................................................................................................................2520.5010100000000
.........................................................................................................................................................................................................................................................................................TCCTGTTCAGCG---CCACCGA................................................................................1920.5010100000000
.................................GGATCC------CAGCA------GCA---GCAGCGGTG........................................................................................................................................................................................................................................................................................................................2320.5010100000000
......................................................................................................................................................................................................................................................................................................................TTGAACAC---CCAGCAGGTGATA---------GCCAGCA.................................2820.5010100000000
.......................TCAGCG---AGGATCC------CAGCA------GCA---.................................................................................................................................................................................................................................................................................................................................2120.5010100000000
............................................................................................................................................CACCAGGAGCAGTTG------------------------------------------------------------CACAT...................................................................................................................................................................2020.5010100000000
.................................................................................GTCAAACAATCTACAGGACTCTG.......................................................................................................................................................................................................................................................................................2320.5010100000000
....................................................................................................................................................................................................................................................................................AGATCTCCTGTTCAGCG---CCACCG.................................................................................2320.5010100000000
.................................................................................................................................................................................................................................................................................TCAAGATCTCCTGTTCAGCG---CCAC...................................................................................2420.5010100000000
....................................................................................AAACAATCTACAGGACTCTGAA------------------------A............................................................................................................................................................................................................................................................2320.5010100000000
..................................................................................................................................................................................................................................................................................................................................................................GCACACCATCGATCTTTTCGAGCAG....2520.5010100000000
.............................................................................................................................................................................................................................................................................CTATTCAAGATCTCCTGTTC..............................................................................................2020.5010100000000
.............................................................................................................................................................................................................................................................................................................................................................AACCAGCACACCATCGATCTTTTCGA........2620.5010100000000
.........................................................................................................................................................................................................................................................................................TCCTGTTCAGCG---CCACCGAG...............................................................................2020.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................GCAACCAGCACACCATCGATCTT.............2320.5010100000000
................................................................................TGTCAAACAATCTACAGGACTCTGAA------------------------A............................................................................................................................................................................................................................................................2720.5010001000000
......................................................................................ACAATCTACAGGACTCTGAA------------------------AC...........................................................................................................................................................................................................................................................2220.5010100000000
........................................................................................................................................................TTG------------------------------------------------------------CACATACATCGCGCTCGCTTGC---------C........................................................................................................................................2620.5010100000000
......................................................................GAGCAAATCATGTCAAACAATC...................................................................................................................................................................................................................................................................................................2220.5010100000000
.......................TCAGCG---AGGATCC------CAGCA------GCA---GCA..............................................................................................................................................................................................................................................................................................................................2420.5010100000000
.......................TCAGCG---AGGATCC------CAGCA------GCA---GC...............................................................................................................................................................................................................................................................................................................................2320.5010100000000
.............................................................................TCATGTCAAACAATCTACAGGACT..........................................................................................................................................................................................................................................................................................2420.5010100000000
...........................................................................................................................................................................................................................................................................................................................................................GCAACCAGCACACCATCGATC...............2120.5010100000000
...........................CG---AGGATCC------CAGCA------GCA---GCAGCGG..........................................................................................................................................................................................................................................................................................................................2420.5010000000010
...............................................................................................................................................CAGGAGCAGTTG------------------------------------------------------------CACATACATCGCG...........................................................................................................................................................2520.5010100000000
.................................................................................GTCAAACAATCTACAGGACTCTGAA------------------------A............................................................................................................................................................................................................................................................2620.5010100000000
.........................................................................................................................................................TG------------------------------------------------------------CACATACATCGCGCTCGCTTGC---------.........................................................................................................................................2420.5010100000000
.......................TCAGCG---AGGATCC------CAGCA------GCA---G................................................................................................................................................................................................................................................................................................................................2220.5010100000000
...........................................................................................................................................GCACCAGGAGCAGTTG------------------------------------------------------------CACAT...................................................................................................................................................................2120.5010100000000
......................................................................................................................................................................................................................................................................................................................................AGGTGATA---------GCCAGCAACCAG............................2020.5010100000000
...............................................................................................................................................................................................................................................................................ATTCAAGATCTCCTGTTCAGCG---CCAC...................................................................................2620.5010100000000
.........................................................................................................................................................................................................................................................................................................................................TGATA---------GCCAGCAACCAGCACACCATC...................2620.5010100000000
.....................................................................................................................................................................................................................................................................................................................GTTGAACAC---CCAGCAGGTGATA---------GC......................................2420.5010100000000
.............................................................................................................................................................................................................................................................................CTATTCAAGATCTCCTGTTCAGCG---CC.....................................................................................2620.5010100000000
...........................................................................................................................................................................................................................................................................CTCTATTCAAGATCTCCTGTTCAGCG---C......................................................................................2720.5010100000000
....................................................................................AAACAATCTACAGGACTCTGAA------------------------AC...........................................................................................................................................................................................................................................................2420.5010100000000
.........................................................................................................................................................................................................................................................................AGCTCTATTCAAGATCTCCTG.................................................................................................2120.5010100000000
.........................................................................................................................................................TG------------------------------------------------------------CACATACATCGCGCTCGCT.....................................................................................................................................................2120.5010100000000
...............................................................................ATGTCAAACAATCTACAGGACTCTGAA------------------------A............................................................................................................................................................................................................................................................2820.5010100000000
droPer2
GCGGGGACTGGCGGCCAGCAACATCAGCG---AGGATGC------CAGCA------GCA---GCAGCGGTGAGCAAATCATGTCAAACAATCTACAGGACTCTGAA------------------------ACAGCAGCAGCACCAGGAGCAGTTG------------------------------------------------------------CACATACATCGCGCTCGCTTGC---------CTC---CTCAC---ACTCCAGCTCTATTCAAGATCTCCTGTTCAGCG---CCACCGAGGATCTGTTGAACAC---CCAGCAGGTGATA---------GCCAGCAACCAGCACACCATCGATCTTTTCGAGCAGGCCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................CATGTCAAACAATCTACA...............................................................................................................................................................................................................................................................................................1812.002200000
...............................................................................................................................................................................................................................................................................ATTCAAGATCTCCTGTTCAGCG---CC.....................................................................................2411.001010000
......................................................................................................................................................................................................................................CGCTTGC---------CTC---CTCAC---ACTCCA.....................................................................................................................2111.001010000
droWil2
ACGTGGCTTGACCTCCAGCAATATAAGTG---ATGATCCTGCTGCCACTA------------TAAGCGGTGAGCAACA--ACAACA--------------ACAACT------------------------AC------AACAACTAGAGCAGGTGAACAA-----------------------------------------------------------TCCAAATCAATCCTCTGCCTCTATAGCCTC---CTCTTCGTCGCCACATTCCATGCAAGATCTCATGTATATGGTATCAACTGAAGATCTTTTGGATACCACACAACAGGTGATA---------GCAACCAATCAGCATACCATAGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................AACA--------------ACAACT------------------------AC------AACAACTAGAGC.........................................................................................................................................................................................................................................2411.00100001
............................................................................CA--ACAACA--------------ACAACT------------------------AC------AACAACTA.............................................................................................................................................................................................................................................2420.50101000
droVir3
CCGTGGCCTGGCCGCCAGCAACATCAGTG---ACAGCGC------CAATG------ATC---TGAGCGGTGAGCAAACCTACTCC---AATCCACAAACATCCAAC------------------------ACAACAGGTGCAG---------------AACCGCAGACGCAGGGTACTAGTACGGGTATGGGT---------------GCTATTGC---TGCTGCCCGTTCGCTTGC---------CTC---CTCGC---ACTCGAATTCCATACAGGATCTCATGCTCAGCG---CCACTGAGGATTTGCTGGACACCACACAACAGGTCATT---------GAGACCAATCAACATACCATAGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................CATCCAAC------------------------ACAACAGGTGCAG---------------A................................................................................................................................................................................................................................2211.001000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................GGGTACTAGTACGGGTATG.................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................C------------------------ACAACAGGTGCAG---------------AACCGCA..........................................................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................................ACAACAGGTGCAG---------------AACCGCAGA........................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGCTGGACACCACACAACAGGT.....................................................2211.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................GCG---CCACTGAGGATTTGCTGGACACCACACAACAGGTCA...................................................3911.001000000000000000000000000000000000000000000000000000000000100000
.........................AGTG---ACAGCGC------CAATG------ATC---TGAGCGGT.........................................................................................................................................................................................................................................................................................................................2711.001000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TGCAG---------------AACCGCAGACGCAGGGTACTA............................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
droMoj3
GCGCGGCCTGGCCGCCAGCAACATCAGCG---ACAGCGT------CAACG------ACC---TAAGCGGTGAGCAAATCTACTCC---AATCCACACACAGCCAAC------------------------ACAGCAGGTGCAACAGG------TGATGAGCAGCAGTC---------AGGTGCGGGTGTGGGTCTGGGTCTGGGCTTGGGTGTTGC---TGCCACGCGTTCGCTTGC---------CTC---CTCGC---ACTCGAATTCCATACAGGATCTCATGCGCAGCG---CCACAGAGGATCTGCTGGACACCACGCAACAGGTGATC---------GAGACCAATCAACATACCATAGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................TGCCACGCGTTCGCTTGC---------CTC---CT.................................................................................................................................2311.001000010
...................................................................................................................................................................................................GGGTCTGGGCTTGGGTGTTGC---TG..................................................................................................................................................................2311.001000001
droGri2
TCGTGGATTGGCGGCCAGCAATATTAGCAGTGACAGCGC------CAGTG------ACT---TGAGTGGTGAGCTAATC---TACACAAATCCACAATCCTCCAATCCAAACCAGACATCATCATCATCATCAGCAGCAGCAGCAGC---GGT------------------------------------------------------------------TGTTGTTGGTTCGCTTGC---------CTCAAACTCGC---ACTCGAATTCCATACAGGATCTGATGCTGAGCG---CAACGGAGGATTTGCTGGACACCACACAGCAGGTGATC---------GAGACCAATCAGCATTCCATAGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................................................................................................................................................................................................................................................................................................................CCACACAGCAGGTGATC---------GAGACCA.................................2411.00110
..................................................................................................................................TCAGCAGCAGCAGCAGC---G........................................................................................................................................................................................................................................18200.10220
..................................................................................................................................TCAGCAGCAGCAGCAGC---GG.......................................................................................................................................................................................................................................19200.05110
droAna3
CAGAGGACTGGCGGCCAGCAACATCAGCG---AAGATCC------C------------------AGCGGTGAGCAAATCCAATCCACAGATCCTCAAGA------------------------------------------------------------------------------------------------------------------------AGCAGGACGCTCGCCTGC---------CTC---CTCTC---CCCCCAACTCCATACAAGATCTCAT------------CACAGAGGACTTGCGGAATAC---CCAGCAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................................................................................GGACGCTCGCCTGC---------CTC---CTCT...............................................................................................................................2111.001100000
...................................................................................................................................................................................................................................GCTCGCCTGC---------CTC---CTCTC---CCCCC......................................................................................................................2311.001000001
....................................................................................................................................................................................................................................................................................................................................................................ACACCATCGATCTCTTCGAGC......2111.001100000
....................................................................................................................................................................................................................................................................................AGATCTCAT------------CACAGAGGACTTGC........................................................................2311.001001000
.............................................................................................................................................................................................................................................................................................................GAGGACTTGCGGAATAC---CCAGCA........................................................2311.001000001
..................................................................................................................................................................................................................................................................................................................................CAGCAGGTGATT---------GCCCACAACC..............................2211.001010000
droBip1
CAGAGGGTTGGCGGCCAGCAACATCAGCG---AAGATCC------C------------------AGCGGTGAGCAAATCCAATCCACAGATCCACAGGA------------------------------------------------------------------------------------------------------------------------AGCGGGACGCTCGCCTGC---------CTC---CTCGCC---GCCCAATTCCATACAAGATCTCAT------------CACGGAGAACTTGCACACCCT---CCAGCACACCATCCAGCACATCCAGAACAACCAGCACACCATCGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotal
No Reads
droKik1
CCGAGGATTGGCAGCCAGCAACATCAGCG---ATGACCC------CAGCAGCAGCAGCAGTAGCAGCGGTGAGCAAACCAATCCCACAAATCCGCAGAT------------------------------------------------------------------------------------------------------------------------CGCCGGACGCTCGCCTGC---------CTC---CTCGCCGCCCTCAAGTTCGATTCAGGATCTCAT------------CACGCAAGACTTGAGAAACAC---ACAGCAGGTGATT---------GCCCACAATCAGCACACCATAGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotal
No Reads
droFic1
CCGGGGACTGGCAGCCAGCAACATCAGCG---ATGATTC------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTTACAGGA------------------------------------------------------------------------------------------------------------------------TGCAGGACGCTCGCCTGT---------CTC---CGCTTCTGGCTCAAGTTCCATGCAGGATCTGAT------------CACGCGGGACCTGAGGAACAC---ACAGCAGGTGATT---------GCCCACAATCAGCACACCATCGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotal
No Reads
droEle1
CCGTGGCTTGGCGGCCAGCAACATCAGCG---ACGATCC------CAGCAGCAGCAGCA---GCAGCGGTGAGCAAACCAACTCCACAAATCCACAGGA------------------------------------------------------------------------------------------------------------------------CGCAGGACGCTCGCCTGC---------CTC---CTCGCCTGCCTCGAGTTCCATGCAGGATCTGAT------------CACGCGGGACCTGCGGAACAC---CCAGCAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotal
No Reads
droBia1
ACGTGGATTTGCAGCTAGTAACATCAGCG---ACGATCCGAGCAGCAGCA------------GCAGCGGTGAGCAAACCAACTCCACAAACCCACAGGA------------------------------------------------------------------------------------------------------------------------TACAGGGCGCTCGCCTGC---------CTC---CTCACCTGCCTCGAGTTCCATGCAAGACCTGAT------------CTCGCGGGACCTGAGAAACAC---CCAACAGGTGATC---------GCCCACAATCAACACACCATTGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotal
No Reads
droTak1
CCGGGGATTAGCAGCCAGCAACATCAGTG---ACGATCC------AAGCAGCAGCAGCA---GCAGCGGTGAGCAAACCAACTCTACAAACCCACAGGA------------------------------------------------------------------------------------------------------------------------TGAAGGACGCTCGCCTGC---------CTC---CCCGCCTGCCTCGAGTTCCATGCAAGACCTGAT------------AACCCGGGACCTGAGGAACAC---CCAACAGGTTATT---------GCCCACAATCAGCACACCATCGATCTCTTTGAGCAGGCCTSizeHit CountTotal NormTotal
No Reads
droEug1
AAGGGGACTGGCAGCTAGTAACATCAGCG---ACGATCC------CAGCA------------GCAGCGGTGAGCAAACCAACTCCACAAATCCACAAGA------------------------------------------------------------------------------------------------------------------------AACAGGACGCTCGCCTGC---------CTC---CTCACCTGCCCCTAGTTCCATGCAGGATCTGAT------------CAGGCGGGACCTGAGGAACAC---CCAACAGGTTATT---------GCCCATAATCAGCACACAATCGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotal
No Reads
dm3
TCGGGGACTGACGGCTAGCAATCTCAACG---ATGATCT------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---CTCGCCTGCCTCAAGTTCCATGCAGGATCTGAT------------CACGCGTGACCTGAGGAACAC---CCAACAGGTGATT---------GCCCACAACCAGCACACCATTGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................TCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGC..........................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................TCAACG---ATGATCT------CAGCA------------GCAGCGGT.........................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCGGGGACTGACGGCTAGC............................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
.......................................................................................................................................................................................................................................................................................TCTGAT------------CACGCGTGACCTGAGGAACAC---C.............................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................TGCAGGATCTGAT------------CACGCGTGACC...........................................................................2413.0030000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................AACG---ATGATCT------CAGCA------------GCAGC............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................ATCTGAT------------CACGCGTGACCTGAGGAA....................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TCT------CAGCA------------GCAGCGGTGAGCAATCCAAC.............................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCTCAACG---ATGATCT------CAGCA------------GCAGCGGT.........................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000
................................ATGATCT------CAGCA------------GCAGCGGTGAGC.....................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CCATGCAGGATCTGAT------------CACGCGTGACC...........................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................ATCTGAT------------CACGCGTGACCTGA........................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AT------------CACGCGTGACCTGAGGA.....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................T---------GCCCACAACCAGCACACCATTGATCTCT............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TTCCATGCAGGATCTGAT------------CACGCGTG..............................................................................2611.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTC........................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................T------CAGCA------------GCAGCGGTGAGCAATCCAA..............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................GCAGCGGTGAGCAATCCAACTCCACAAA.....................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAACG---ATGATCT------CAGCA------------GCAGCGGT.........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................TGCAGGATCTGAT------------CACGCGTGACCTGA........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CCATTGATCTCTTCGAGCAGGCCT2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................CGCGTGACCTGAGGAACAC---CCAACAGGT.....................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
TCGGGGACTGACGGCTAGCAATCTCA.....................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTAGCAATCTCAACG---ATGATC.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AATCTCAACG---ATGATCT------CAGCA------------GC...............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTG...................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................CTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCG...........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................T------CAGCA------------GCAGCGGTGAGCAATCCAAC.............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................ACACCATTGATCTCTTCGAGCA.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................ACGCGTGACCTGAGGAACAC---CC............................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TGCCTCAAGTTCCATGCAGGATCTGA...................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................T------------CACGCGTGACCTGAGGAACA..................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CAACG---ATGATCT------CAGCA------------GCAGCGGTG........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................................................................................................................................................................TCCATGCAGGATCTGAT------------CACGCGTGACC...........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCAGCGGTGAGCAATCCAACT............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CACCATTGATCTCTTCGAGC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------C........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GAT------------CACGCGTGACCTGAGGAACAC---C.............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CACACCATTGATCTCTTCGAGCAGGCC.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................T------------CACGCGTGACCTGAGGAAC...................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................C---------CTC---CTCGCCTGCCTCAAGTTCC................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................G---ATGATCT------CAGCA------------GCAGCGGTGAGC.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................CAAGTTCCATGCAGGATCTGAT------------CACGCG................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................CACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTC........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
TCGGGGACTGACGGCTAGCAATCTCAA....................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GTGACCTGAGGAACAC---CCAACAGGT.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................T------CAGCA------------GCAGCGGTGAGCAATCCAAA.............................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................T------------CACGCGTGACCTGAGGAACAC---CCAAC.........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................................................................................ACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCA................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CCATTGATCTCTTCGAGCAGGC..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGC---------CTC---CTCGCCTGCCTCAAGTT..................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................CAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------C........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AGGATCTGAT------------CACGCGTGACC...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TGAT------------CACGCGTGACCTGAGGAACAC---CCA...........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................TGACCTGAGGAACAC---CCAACAGGTGAT..................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TCGGGGACTGACGGCTAGCAATCTC......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGCAGGATCTGAT------------CACGCGTGAC............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................TGAGGAACAC---CCAACAGGTGATT---------GCC.....................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TGCAGGATCTGAT------------CACGCGTGACCTG.........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AGGGCGCTCGCCTGC---------CTC---CTCGCCTGCCT........................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GCGGTGAGCAATCCAACTCCACAAA.....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GAACAC---CCAACAGGTGATT---------GCC.....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCTCAACG---ATGATCT------CAGCA------------GCAGCGG..........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................TCTGAT------------CACGCGTGACCTGAGGAAC...................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...................................ATCT------CAGCA------------GCAGCGGTGAGCAATC.................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................AACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---...................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TAGCAATCTCAACG---ATGATCT------CAGCA------------GCAG.............................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................ATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------T...................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GATCT------CAGCA------------GCAGCGGTGA.......................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........GACGGCTAGCAATCTCAACG---ATGATCT------..................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTG...................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GAGGAACAC---CCAACAGGTGATT---------GCCCAC..................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGAGGAACAC---CCAACAGGTGATT---------........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................ATGCAGGATCTGAT------------CACGCG................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CCAGCACACCATTGATCTC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................G---ATGATCT------CAGCA------------GCAGCGGTGAGCAA...................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CAC---CCAACAGGTGATT---------GCCCACA.................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACG---ATGATCT------CAGCA------------GCAGCGGT.........................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CATGCAGGATCTGAT------------CACGCGTGACC...........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CTCAACG---ATGATCT------CAGCA------------GCAGCGGT.........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................TCTCAACG---ATGATCT------CAGCA------------GC...............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCAACG---ATGATCT------CAGCA------------GCAGCGGC.........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AT------------CACGCGTGACCTGAGGAACAC---CCAACA........................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................G---ATGATCT------CAGCA------------GCAGCGGTGAGA.....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................TCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTC........................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---...................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CCATGCAGGATCTGAT------------CA....................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................G---ATGATCT------CAGCA------------GCAGCGGTGAGCA....................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................GATCTGAT------------CACGCGTGACCTGAG.......................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GTGATT---------GCCCACAACCAG............................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCGGGGACTCACGGCTAGCAATCTCAGCAACGACGATCT------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---CTCGCCTGCCTCAAGTTCCATGGAGGATCTGAT------------CACGCGTGACCTGAGGAACAC---CCAACAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................CACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGG.............................................................................................................................................................2211.00100000000000001000
.....................................................................................................................................................................................................................................................................................GATCTGAT------------CACGCGTGACCT..........................................................................2011.00101000000000000000
...........................................................................................................................................................................................................................................................................................................CGCGTGACCTGAGGAACAC---CCAACAGG......................................................2711.00100000010000000000
.....................................................................................................................................................................................................................................................................CTCAAGTTCCATGGAGGAT.......................................................................................................1911.00100000000000100000
droSec2
TCGGGGACTCACGGCTAGCAATCTCAGCAACGACGATCT------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---CTCGCCTGCCTCAAGTTCCATGCAGGATCTGAT------------CACGCGTGACCTGAGGAACAC---CCAACAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................CACACCATCGATCTCTTCGAGCAGGC..2611.0011000
droYak3
TCGAGGACTGACAGCTAGCAATCTCAACG---ACGATCT------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---CTCTCCTGCCTCGAGTTCCATGCAGGATCTGAT------------CACGCGTGACCTGAGGAACAC---CCAACAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................TGCAGGGCGCTCGCCTGC---------CT.......................................................................................................................................2020.50101000000000
droEre2
TCGGGGACTGACAGCTAGCAATCTCAACG---ACGATCT------CAGCA------------GCAGCGGTGAGCAATCCAACTCCACAAATTCAAACGA------------------------------------------------------------------------------------------------------------------------TGCAGGGCGCTCGCCTGC---------CTC---CTCACCTGCCTCAAGTTCCATGCAGGATCTGAT------------CACGCGTGACCTGAGGAACAC---CCAACAGGTGATT---------GCCCACAACCAGCACACCATCGATCTCTTCGAGCAGGCCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................GGATCTGAT------------CACGCGTGACCTG.........................................................................2211.0011000000
............................G---ACGATCT------CAGCA------------GCAGC............................................................................................................................................................................................................................................................................................................................1811.0011000000
..................................................................................................................................................................................................................................................................................CAGGATCTGAT------------CACGCGTGACC...........................................................................2211.0010000010
...........................CG---ACGATCT------CAGCA------------GCAGCGGTGA.......................................................................................................................................................................................................................................................................................................................2411.0010001000
.CGGGGACTGACAGCTAGCA...........................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
............................G---ACGATCT------CAGCA------------GCAGCGGTGAGC.....................................................................................................................................................................................................................................................................................................................2511.0010000100
.............................................................................................................................................................................................................................................................................CCATGCAGGATCTGAT------------CACGC.................................................................................2111.0010000010
........................................................................................................................................................................................................................................................................................................................................................CCCACAACCAGCACACCATCGATCTC.............2611.0011000000

Generated: 05/18/2015 at 06:41 AM