ID:

dps_3339

 Coordinate:

XR_group8:6042659-6042722 +

 Confidence:

candidate

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.5

Flybase annnotation

intron [Dpse\GA20377-in]; CDS [Dpse\GA20377-cds]; CDS [Dpse\GA20377-cds]

No Repeatable elements found

Sense Strand Reads

AGGATAACCACGGCCTGGCCCTGGGCCGACTGGCCTCCATTGTTGAGCAGGTGAGTGTGGAGCGGTGACTTCTGATCCCCGTGTAACCTACACCGTCTCTGTTCCCCCTTGCAGGTGGCCGAGTGCCATTTGGAGGGCCGCGAGGTGATGATGGTCACGAGTGG

**************************************************(((((...(((((((.(((...........(((((...))))).))).)))))))..)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body

 M059

embryo

 V112

male body		 M062

head

 GSM343916

embryo
............................................................................................CCGTCTCTGTTCCCCCTTGCAG.................................................. 22 0 1 9.00 9 8 0 0 1 0
............................................................................................CCGTCTCTGTTCCCCCTTGCA................................................... 21 0 1 4.00 4 3 0 0 1 0
..GATAACCACGGCCTGGCCCTGGGC.......................................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0
...............................................................................................................................ATTTGGAGGGCCGCGAGGTGATGATGGT......... 28 0 1 2.00 2 0 0 2 0 0
............................................................................................CCGTCTCTGTTCCCCCTTGC.................................................... 20 0 1 2.00 2 2 0 0 0 0
..........................CGACTGGCCTCCATTGTGGAGCAGGT................................................................................................................ 26 1 1 2.00 2 1 1 0 0 0
..........................CGACTGGCCTCCATTGTGGA...................................................................................................................... 20 1 1 2.00 2 2 0 0 0 0
..........................................................................................................................................CGCGAGGTGATGATGGTCACGAGT.. 24 0 1 1.00 1 1 0 0 0 0
....................................................................................................................GGCCGAGTGCCATTTGGAGGGC.......................... 22 0 1 1.00 1 0 0 1 0 0
.......................................................................................................................CGAGTGCCATTTGGAGGG........................... 18 0 1 1.00 1 1 0 0 0 0
...........................................................................................ACCGTCTCTGTTCCCCCTTGCA................................................... 22 0 1 1.00 1 1 0 0 0 0
................................................................................................................................TTTGGAGGGCCGCGAGGT.................. 18 0 1 1.00 1 1 0 0 0 0
......ACCACGGCCTGGCCCTGGGCC......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...ATAACCACGGCCTGGCCCTG............................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
...................................................................................TAACCTACACCGTCTCTGTTCCCCCT....................................................... 26 0 1 1.00 1 1 0 0 0 0
.............................................................................................CGTCTCTGTTCCCCCTTGCA................................................... 20 0 1 1.00 1 1 0 0 0 0
..GGTAACCACGGCCTGGCCCTGGGC.......................................................................................................................................... 24 1 1 1.00 1 0 1 0 0 0
..........................CTACTGGCCTCCATTGTGGAGCAGGT................................................................................................................ 26 2 1 1.00 1 0 1 0 0 0
..................................................GTGAGTGTGGAGCGGAGACTTCTGATC....................................................................................... 27 1 1 1.00 1 1 0 0 0 0
....TAACCACGGCCTGGCCCTGGGC.......................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..........................CGACTAGCCTCCATTGTGGA...................................................................................................................... 20 2 2 1.00 2 1 0 0 0 1
...............................................................................................................................ATTTGGAGGGCCGCGAGGT.................. 19 0 1 1.00 1 1 0 0 0 0
...........................................................................................ACCGTCTCTGTTCCCCCTTGC.................................................... 21 0 1 1.00 1 1 0 0 0 0
..........................CGACTGGCCTCCATTGTGGAGCA................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................CATTTGGAGGGCCGCGAG.................... 18 0 1 1.00 1 1 0 0 0 0
.............................................................................................CGTCTCTGTTCCCCCTTGCAG.................................................. 21 0 1 1.00 1 1 0 0 0 0
..........................CGACTGGCCTCCATTGTGG....................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
...........................................................................................................................................GCGAGGTGATGATGGTCACGAGTGG 25 0 1 1.00 1 0 0 0 0 1
....................CTGGGCCGCCTGGCCTCCGTTGTCG....................................................................................................................... 25 3 2 0.50 1 1 0 0 0 0
..................................................GTGAGTGTGGAGCGGAGA................................................................................................ 18 1 3 0.33 1 1 0 0 0 0
...........................................................................................................................TGCCTTTTGGAGCGCCGCGC..................... 20 3 9 0.11 1 1 0 0 0 0
..........................................................................................................................................CGCTAGGCGATGATGCTCA....... 19 3 17 0.06 1 1 0 0 0 0

Anti-sense strand reads

TCCTATTGGTGCCGGACCGGGACCCGGCTGACCGGAGGTAACAACTCGTCCACTCACACCTCGCCACTGAAGACTAGGGGCACATTGGATGTGGCAGAGACAAGGGGGAACGTCCACCGGCTCACGGTAAACCTCCCGGCGCTCCACTACTACCAGTGCTCACC

**************************************************(((((...(((((((.(((...........(((((...))))).))).)))))))..)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body
............................................................................................GGCAGAGACAAGGGGGAACG.................................................... 20 0 1 1.00 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 XR_group8:6042609-6042772 + dps_3339 candidate AGGATAACCACGGCCTGGCCCTGGGCCGACTGGCCTCCATTGTTGAGCAGGTGAGTGTGGAG---------------------------------------------------C------------GGTGACT--------TCTGATCCCCGTGTAACC------------------------T--ACA--C--------------------------------------------------CGTCTCT--------------------------------------------GTTCCCCCTTGCAGGTGGCCGAGTGCCATTTGGAGGGCCGCGAGGTGATGATGGTCACGAGTGG
droPer2 scaffold_45:441385-441548 - AGGATAACCACGGCCTGGCCCTGGGCCGACTGGCCTCCATTGTAGAGCAGGTGAGTGTGGAG---------------------------------------------------C------------GGAGACT--------TCTGATCCCCGTATTACC------------------------T--GCA--C--------------------------------------------------CGTCTAT--------------------------------------------GTTCCCCCTTGCAGGTGGCCGAGTGCCATTTGGAGGGCCGCGAGGTGATGATGGTCACGAGTGG
droWil2 scf2_1100000004762:1848400-1848460 - AGGACAATCATGGATTGGCTCTGGGACGATTGGCATCAATTGTGGAGCAGGTAATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGA
droVir3 scaffold_13049:20935770-20935828 + AGGACAATCATGGATTGGCACTTGGTCGTCTGGCGTCCATTGTGGAGCAGGTAAGTGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:15289275-15289449 + AGGATAATCATGGCCTGGCTCTGGGTCGTCTGGCTTCCATTGTGGAGCAGGTGATTAAA--T----------------------------------------------TGAAAT------CG--CAAATGAAT--------TTTAAATATCATATTTAA------------------------TTCACTTAC--------------------------------------------------TCACTAT--------------------------------------------TTGCCCATATGTAGGTCGCCGAGTGCCATTTGGAGGGTCGAGAGGTCATCATGGTGACCAGCGG
droGri2 scaffold_15110:22763369-22763431 - TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTCCAGGTGGCCGAGTGCCATTTAGAGGGTCGTGAGGTCATCATGGTGACCAGTGG
droAna3 scaffold_13337:21102875-21102936 + AGGATAATCATGGATTGGCCCTTGGCCGTCTGGCTTCTATTGTGGAACAGGTGAGAGCAAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396707:327130-327328 - AGGATAATCATGGACTGGCCCTTGGCCGTCTGGCCTCTATTGTGGAGCAGGTGAGAGCTAAG-----GATAT---ATAATATTCCTCATACACAGCAAGC--------------------------------------------------------------------------------------------------------------AGAGATCAAA-------------------------------------TACCTTCTAGCAACTGATTTAATTTAATATTTAACA-TT--TTTTGACAGGTTGCCGAGTGTCACTTGGAGGGTCGTGAAGTGATGATGGTGACCAGTGG
droKik1 scf7180000302441:2093667-2093826 - AGGATAACCATGGACTGGCCCTCGGGCGACTGGCCTCCATAGTGGAGCAGGTAAATAAA--G----------------------------------------------------GAATATTAGAGAAATAAATAAATATCTTC---------------------------------------------A--A--------------------------------------------------ACATTAT--------------------------------------------AATTACC--CTTAGGTGGCCGAGTGCCATTTGGAGGGGCGTGAGGTGATGATGGTCACCAGTGG
droFic1 scf7180000453945:125925-125990 + CCGTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCGGCAGGTCGCCGAGTGCCATTTGGAGGGCCGCGAGGTAATGATGGTCACCAGCGG
droEle1 scf7180000491199:865324-865386 - TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTGTTCAGGTTGCCGAGTGCCACTTGGAGGGTCGTGAGGTGATGATGGTCACCAGTGG
droRho1 scf7180000759602:18355-18416 + AGGACAACCATGGACTAGCCCTGGGGCGACTGGCCTCCATCGTGGAGCAGGTAAGATTTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302377:1314611-1314686 - CACCGTATTACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACTGACAGGTTGCCGAGTGCCACTTAGAGGGCCGTGAGGTGATGATGGTCACCAGTGG
droTak1 scf7180000414002:117717-117769 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGTGGCCGAGTGTCATTTGGAGGGTCGTGAGGTGATGATGGTCACCAGTGG
droEug1 scf7180000409472:804948-805211 + AGGACAACCATGGACTAGCCCTTGGTCGACTGGCCTCTATCGTAGAACAGGTTAGATAAGTTCTACTCTTCTGCATTTCTCT-TAATAGTTCCTTCCGGGAAATTAAAT-----GAATTTGT----GG---------------TAATCTTGGTATTATCCAGTTTTATCACAAGCTTTTATCGT--AAA--TCATCTCCGAATTTTAAGTAAAATTATAATTAGT--------------------------------TACAT--------------------------------TTTCATTTGACAGGTGGCCGAGTGCCATTTGGAGGGCCGTGAGGTGATGATGGTGACCAGCGG
dm3 chr3L:21969510-21969733 + AGGACAACCATGGACTAGCCCTCGGCCGTCTGGCCTCTATTGTGGAGCAGGTAGGCATTAAA-----TATTT---TTTCTAT-CTATATTTTCAGCAGGA--------------------------------------------------------------------------------------------------------------AAAGTAACAACTGGCACAAAGTCATATTCTAA-------GATATTATTACAT--GCGTATCTTCTTCAATTCTTCACCCAAAA-----CCTCGATAGGTTGCCGAGTGCCATTTGGAAGGACGTGAAGTGATGATGGTCACCAGCGG
droSim2 3l:21484703-21484926 + AGGACAACCATGGACTAGCACTCGGCCGACTGGCGTCTATTGTGGAGCAGGTAGGCATTAAA-----TATCT---GTTATAT-CTTAATTTTCACCAGGA--------------------------------------------------------------------------------------------------------------AAAGTTACAACTAGCACAAAGTAATATTCTTA-------TATATTATTACAT--TCGCAATTTCTTCAATTCTTCACCCAACA-----ACTCGATAGGTTGCCGAGTGCCATTTGGAGGGACGTGAGGTGATGATGGTCACCAGCGG
droSec2 scaffold_11:1895098-1895321 + dse_779 AGGACAACCATGGACTAGCACTCGGCCGACTGGCGTCTATTGTGGAGCAGGTAGGCATTAAA-----TATCT---GTTATAT-CTTAATTTTCACCAGGA--------------------------------------------------------------------------------------------------------------AAAGTTACAACTAGCACAAAGTAATATTCTTA-------TATATTATTACAT--TCGCAATTTCTTCAATTCTTCACCCAACA-----ACTCGATAGGTTGCCGAGTGCCATTTGGAGGGACGTGAAGTGATGATGGTCACCAGCGG
droYak3 3L:22297249-22297300 + A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTGCCGAGTGCCATTTGGAGGGACGTGAGGTGATGATGGTCACCAGTGG
droEre2 scaffold_4784:21644420-21644592 + AGGACAACCATGGACTAGCCCTCGGCCGCCTGGCGTCTATTGTGGAGCAGGTAAGGTCTACA-----AATCT---GTTATGT-CT--------------------------------------------------------TCAAACCCTATTATTACT------------------------T-----------------------------------------------------------------TACATTAATATGC--TGGTA----------------------------ATTTCGATAGGTTGCCGAGTGCCATTTGGAGGGACGCGAGGTGATGATGGTCACCAGCGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGGATAACCACGGCCTGGCCCTGGGCCGACTGGCCTCCATTGTTGAGCAGGTGAGTGTGGAG---------------------------------------------------C------------GGTGACT--------TCTGATCCCCGTGTAACC------------------------T--ACA--C--------------------------------------------------CGTCTCT--------------------------------------------GTTCCCCCTTGCAGGTGGCCGAGTGCCATTTGGAGGGCCGCGAGGTGATGATGGTCACGAGTGGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................................................................................................................C--------------------------------------------------CGTCTCT--------------------------------------------GTTCCCCCTTGCAG..................................................2219.0090801000000
...............................................................................................................................................................................................C--------------------------------------------------CGTCTCT--------------------------------------------GTTCCCCCTTGCA...................................................2114.0040301000000
..GATAACCACGGCCTGGCCCTGGGC...........................................................................................................................................................................................................................................................................................................................................2413.0030300000000
................................................................................................................................................................................................................................................................................................................................ATTTGGAGGGCCGCGAGGTGATGATGGT.........2812.0020000002000
...............................................................................................................................................................................................C--------------------------------------------------CGTCTCT--------------------------------------------GTTCCCCCTTGC....................................................2012.0020200000000
...........................................................................................................................................................................................................................................................................................................................................CGCGAGGTGATGATGGTCACGAGT..2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................GGCCGAGTGCCATTTGGAGGGC..........................2211.0010000001000
........................................................................................................................................................................................................................................................................................................................CGAGTGCCATTTGGAGGG...........................1811.0010100000000
............................................................................................................................................................................................A--C--------------------------------------------------CGTCTCT--------------------------------------------GTTCCCCCTTGCA...................................................2211.0010100000000
.................................................................................................................................................................................................................................................................................................................................TTTGGAGGGCCGCGAGGT..................1811.0010100000000
......ACCACGGCCTGGCCCTGGGCC..........................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...ATAACCACGGCCTGGCCCTG..............................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................TAACC------------------------T--ACA--C--------------------------------------------------CGTCTCT--------------------------------------------GTTCCCCCT.......................................................2611.0010100000000
..................................................................................................................................................................................................................................................CGTCTCT--------------------------------------------GTTCCCCCTTGCA...................................................2011.0010100000000
....TAACCACGGCCTGGCCCTGGGC...........................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................ATTTGGAGGGCCGCGAGGT..................1911.0010100000000
............................................................................................................................................................................................A--C--------------------------------------------------CGTCTCT--------------------------------------------GTTCCCCCTTGC....................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGCCGCGAG....................1811.0010100000000
..................................................................................................................................................................................................................................................CGTCTCT--------------------------------------------GTTCCCCCTTGCAG..................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................GCGAGGTGATGATGGTCACGAGTGG2511.0010000100000
droPer2
AGGATAACCACGGCCTGGCCCTGGGCCGACTGGCCTCCATTGTAGAGCAGGTGAGTGTGGAG---------------------------------------------------C------------GGAGACT--------TCTGATCCCCGTATTACC------------------------T--GCA--C--------------------------------------------------CGTCTAT--------------------------------------------GTTCCCCCTTGCAGGTGGCCGAGTGCCATTTGGAGGGCCGCGAGGTGATGATGGTCACGAGTGGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.....................................................................................................................................................................................................................................................................................................................GGCCGAGTGCCATTTGGAGGGC..........................2215.005500000
...........................GACTGGCCTCCATTGTAGAGC.....................................................................................................................................................................................................................................................................................................................2112.002200000
..........................CGACTGGCCTCCATTGTAGAGCA....................................................................................................................................................................................................................................................................................................................2312.002101000
..........................CGACTGGCCTCCATTGTAGAGCAGGT.................................................................................................................................................................................................................................................................................................................2611.001010000
..........................CGACTGGCCTCCATTGTAG........................................................................................................................................................................................................................................................................................................................1911.001001000
....................................CCATTGTAGAGCAGGTGGC..............................................................................................................................................................................................................................................................................................................1960.171100000
droWil2
AGGACAATCATGGATTGGCTCTGGGACGATTGGCATCAATTGTGGAGCAGGTAATTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
........CATGGATTGGCTCTGGGAC..........................................................................................................................................................................................................................................................................................................................................1917.00711410
........CATGGATTGGCTCTGGGACGATT......................................................................................................................................................................................................................................................................................................................................2316.00611400
........CATGGATTGGCTCTGGGA...........................................................................................................................................................................................................................................................................................................................................1815.00511210
........CATGGATTGGCTCTGGGACGATTGGC...................................................................................................................................................................................................................................................................................................................................2614.00400310
.....AATCATGGATTGGCTCTGGGA...........................................................................................................................................................................................................................................................................................................................................2114.00400220
............GATTGGCTCTGGGACGATTGGC...................................................................................................................................................................................................................................................................................................................................2214.00400310
......ATCATGGATTGGCTCTGGGACGAT.......................................................................................................................................................................................................................................................................................................................................2413.00320100
......ATCATGGATTGGCTCTGGGAC..........................................................................................................................................................................................................................................................................................................................................2113.00310110
......ATCATGGATTGGCTCTGGGA...........................................................................................................................................................................................................................................................................................................................................2012.00200110
.........ATGGATTGGCTCTGGGACGATTGGC...................................................................................................................................................................................................................................................................................................................................2512.00200200
.........ATGGATTGGCTCTGGGACGATT......................................................................................................................................................................................................................................................................................................................................2212.00200200
.....AATCATGGATTGGCTCTGGGAC..........................................................................................................................................................................................................................................................................................................................................2212.00210010
.......TCATGGATTGGCTCTGGGAC..........................................................................................................................................................................................................................................................................................................................................2012.00200200
..GACAATCATGGATTGGCTCTGGGA...........................................................................................................................................................................................................................................................................................................................................2412.00200200
........CATGGATTGGCTCTGGGACGAT.......................................................................................................................................................................................................................................................................................................................................2212.00200020
..................................ATCAATTGTGGAGCAGGTAGCC.............................................................................................................................................................................................................................................................................................................2231.33400310
.......TCATGGATTGGCTCTGGGACGA........................................................................................................................................................................................................................................................................................................................................2211.00110000
.................GCTCTGGGACGATTGGCATC................................................................................................................................................................................................................................................................................................................................2011.00100010
.....AATCATGGATTGGCTCTGGGACG.........................................................................................................................................................................................................................................................................................................................................2311.00100010
....CAATCATGGATTGGCTCTGGGACGATT......................................................................................................................................................................................................................................................................................................................................2711.00100100
........CATGGATTGGCTCTGGGACGATTGG....................................................................................................................................................................................................................................................................................................................................2511.00100100
.........ATGGATTGGCTCTGGGACGATTG.....................................................................................................................................................................................................................................................................................................................................2311.00100100
.................................CATCAATTGTGGAGCAGGTAGC..............................................................................................................................................................................................................................................................................................................2221.00200110
.....AATCATGGATTGGCTCTGGGACGATT......................................................................................................................................................................................................................................................................................................................................2611.00100010
..............................TGGCATCAATTGTGGAGCAGGTAGC..............................................................................................................................................................................................................................................................................................................2511.00100010
..............................TGGCATCAATTGTGGAGCA....................................................................................................................................................................................................................................................................................................................1911.00100100
.................................CATCAATTGTGGAGCAGGTACCC.............................................................................................................................................................................................................................................................................................................2311.00100010
.........ATGGATTGGCTCTGGGAC..........................................................................................................................................................................................................................................................................................................................................1811.00110000
.............ATTGGCTCTGGGACGATTGGCATC................................................................................................................................................................................................................................................................................................................................2411.00100010
................................GCATCAATTGTGGAGCAGGTAGC..............................................................................................................................................................................................................................................................................................................2311.00100100
...............TGGCTCTGGGACGATTGGC...................................................................................................................................................................................................................................................................................................................................1911.00100100
...ACAATCATGGATTGGCTCTGGGA...........................................................................................................................................................................................................................................................................................................................................2311.00100100
............GATTGGCTCTGGGACGATTGGCATC................................................................................................................................................................................................................................................................................................................................2511.00100010
..........................CGATTGGCATCAATTGTGG........................................................................................................................................................................................................................................................................................................................1911.00101000
....................CTGGGACGATTGGCATCA...............................................................................................................................................................................................................................................................................................................................1811.00100010
......ATCATGGATTGGCTCTGGGACGATT......................................................................................................................................................................................................................................................................................................................................2511.00100010
....................CTGGGACGATTGGCATCAAT.............................................................................................................................................................................................................................................................................................................................2011.00100010
...........................GATTGGCATCAATTGTGGAGCAG...................................................................................................................................................................................................................................................................................................................2311.00100010
...............................GGCATCAATTGTGGAGCAGGT.................................................................................................................................................................................................................................................................................................................2111.00101000
.........ATGGATTGGCTCTGGGACG.........................................................................................................................................................................................................................................................................................................................................1911.00100100
...............................GGCATCAATTGTGGAGCAGGTAGC..............................................................................................................................................................................................................................................................................................................2411.00100010
................GGCTCTGGGACGATTGGCAT.................................................................................................................................................................................................................................................................................................................................2011.00101000
...........................GATTGGCATCAATTGTGGAGCA....................................................................................................................................................................................................................................................................................................................2211.00100100
............................ATTGGCATCAATTGTGGAGCAG...................................................................................................................................................................................................................................................................................................................2211.00100010
.....AATCATGGATTGGCTCTGG.............................................................................................................................................................................................................................................................................................................................................1911.00100100
..................................ATCAATTGTGGAGCAGGTA................................................................................................................................................................................................................................................................................................................1911.00100010
....................CTGGGACGATTGGCATCAATTGTGGAGC.....................................................................................................................................................................................................................................................................................................................2811.00100100
........CATGGATTGGCTCTGGGACG.........................................................................................................................................................................................................................................................................................................................................2011.00100100
.......TCATGGATTGGCTCTGGGACGATT......................................................................................................................................................................................................................................................................................................................................2411.00100010
............................ATTGGCATCAATTGTGGAGCAGGTAGC..............................................................................................................................................................................................................................................................................................................2711.00100100
.........ATGGATTGGCTCTGGGACGA........................................................................................................................................................................................................................................................................................................................................2011.00110000
...ACAATCATGGATTGGCTCTGG.............................................................................................................................................................................................................................................................................................................................................2111.00101000
.....AATCATGGATTGGCTCTGGGACGATTGGC...................................................................................................................................................................................................................................................................................................................................2911.00100100
....CAATCATGGATTGGCTCTGGGA...........................................................................................................................................................................................................................................................................................................................................2211.00100100
..............TTGGCTCTGGGACGATTGGC...................................................................................................................................................................................................................................................................................................................................2011.00100100
........CATGGATTGGCTCTGGGACGATTGGCAT.................................................................................................................................................................................................................................................................................................................................2811.00100100
............................ATTGGCATCAATTGTGGA.......................................................................................................................................................................................................................................................................................................................1820.50100010
..................................ATCAATTGTGGAGCAGGTAGC..............................................................................................................................................................................................................................................................................................................2120.50100010
....................................CAATTGTGGAGCAGGTAGC..............................................................................................................................................................................................................................................................................................................1950.20100100
droVir3
AGGACAATCATGGATTGGCACTTGGTCGTCTGGCGTCCATTGTGGAGCAGGTAAGTGCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................CTTGGTCGTCTGGCGTCC...............................................................................................................................................................................................................................................................................................................................1813.0030001000000000000000000000000000000000000000000000000000000010000000000001000000
...ACAATCATGGATTGGCACTTGGTC..........................................................................................................................................................................................................................................................................................................................................2412.0020001000000000000000000100000000000000000000000000000000000000000000000000000000
.GGACAATCATGGATTGGCA.................................................................................................................................................................................................................................................................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTCTGGCGTCCATTGTGGA.......................................................................................................................................................................................................................................................................................................................1911.0010000000000010000000000000000000000000000000000000000000000000000000000000000000
......ATCATGGATTGGCACTTGGTCGT........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
........CATGGATTGGCACTTGGTCGTCTGGCGTC................................................................................................................................................................................................................................................................................................................................2911.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
................GGCACTTGGTCGTCTGGCC..................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000100000000
.........ATGGATTGGCACTTGGTCGTCTGGCGTC................................................................................................................................................................................................................................................................................................................................2811.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATGGATTGGCACTTGGTCGTCTGGCGTCCATTGTGGAGCAGG..................................................................................................................................................................................................................................................................................................................4211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000
....................CTTGGTCGTCTGGCGTCCATTGTGGAGCA....................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
................GGCACTTGGTCGTCTGGCGTCC...............................................................................................................................................................................................................................................................................................................................2211.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATGGATTGGCACTTGGTCGTCTGGCGTCC...............................................................................................................................................................................................................................................................................................................................2911.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATGGATTGGCACTTGGTCGTC.......................................................................................................................................................................................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.GGACAATCATGGATTGGCACTTGGTC..........................................................................................................................................................................................................................................................................................................................................2611.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATGGATTGGCACTTGGTCGT........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000100000000000000000000000000000000000000000000000000000000000000
............................TCTGGCGTCCATTGTGGAGC.....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
.....AATCATGGATTGGCACTTGGTCGTC.......................................................................................................................................................................................................................................................................................................................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATTGGCACTTGGTCGTCTGGCGTC................................................................................................................................................................................................................................................................................................................................2411.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATCATGGATTGGCACTTGGTCGTC.......................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................CTGGCGTCCATTGTGGAGCAG...................................................................................................................................................................................................................................................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATGGATTGGCACTTGGTCGTCTGGCG..................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
.....AATCATGGATTGGCACTTGGTCGTCT......................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000100000000000000000000
........................GTCGTCTGGCGTCCATTGTGGAGCA....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000100000000000000000000000000000000000000000000000000000000000000
........CATGGATTGGCACTTGGTC..........................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
..GACAATCATGGATTGGCACTTGGTC..........................................................................................................................................................................................................................................................................................................................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......ATCATGGATTGGCACTTGGTC..........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
................GGCACTTGGTCGTCTGGC...................................................................................................................................................................................................................................................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
AGGATAATCATGGCCTGGCTCTGGGTCGTCTGGCTTCCATTGTGGAGCAGGTGATTAAA--T----------------------------------------------TGAAAT------CG--CAAATGAAT--------TTTAAATATCATATTTAA------------------------TTCACTTAC--------------------------------------------------TCACTAT--------------------------------------------TTGCCCATATGTAGGTCGCCGAGTGCCATTTGGAGGGTCGAGAGGTCATCATGGTGACCAGCGGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGTCGAGAGGTC.................2113.003200001
.....................................................................................................................................................................................................................................................................................................................................GAGGGTCGAGAGGTCATCATGGTGACCA....2812.002100001
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGTCGAGAGGT..................2412.002200000
.....AATCATGGCCTGGCTCTGGGC...........................................................................................................................................................................................................................................................................................................................................2111.001000010
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGTCGAGA.....................2111.001000001
...........................GTCTGGCTTCCATTGTGGAG......................................................................................................................................................................................................................................................................................................................2011.001100000
......ATCATGGCCTGGCTCTGGGTCGTCTGGC...................................................................................................................................................................................................................................................................................................................................2811.001000001
......ATCATGGCCTGGCTCTGG.............................................................................................................................................................................................................................................................................................................................................1811.001100000
.GGATAATCATGGCCTGGCT.................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGTCGAGAGGTC.................2511.001000001
.................................................................................................................................................................................................................................................................................................................................TTTGGAGGGTCGAGAGGTC.................1911.001100000
..GATAATCATGGCCTGGCTCTG..............................................................................................................................................................................................................................................................................................................................................2111.001100000
.....AATCATGGCCTGGCTCTGG.............................................................................................................................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGTCGAGAGGT..................2011.001100000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGTCGAGAGGT..................2211.001100000
....................................................................................................................................................................................................................................................................................................................................GGAGGGTCGAGAGGTCATCATGGT.........2411.001000001
..................................................................................................................................................................................................................................................................................................................................TTGGAGGGTCGAGAGGTCATC..............2111.001100000
...................................................................................................................................................................................................................................................................................................................................TGGAGGGTCGAGAGGTCATCAT............2211.001000001
..........................CGTCTGGCTTCCATTGTGGA.......................................................................................................................................................................................................................................................................................................................2011.001000100
......ATCATGGCCTGGCTCTGGGTCGTCTG.....................................................................................................................................................................................................................................................................................................................................2611.001100000
...............TGGCTCTGGGTCGTCTGGC...................................................................................................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................................................................................TCACTAT--------------------------------------------TTGCCCATATGTAG..................................................2111.001000010
......................................................................................................................................................................................................................................................................................................................GCCGAGTGCCATTTGGAGGGTC.........................2211.001000001
....................CTGGGTCGTCTGGCTTCCATTGTGGA.......................................................................................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................................................................................................................................TGGAGGGTCGAGAGGTCATCATG...........2311.001100000
.....AATCATGGCCTGGCTCTGGGTCGTC.......................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................................................................................................................................................................................................................................................................................CGAGTGCCATTTGGAGGGTC.........................2011.001000001
...................................................................................................................................................................................................................................................................................................................GTCGCCGAGTGCCATTTGGAG.............................2111.001000001
.........................................................................................................................................................................................................................................................................................................................GAGTGCCATTTGGAGGGTC.........................1911.001000001
droGri2
TTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTTCCAGGTGGCCGAGTGCCATTTAGAGGGTCGTGAGGTCATCATGGTGACCAGTGGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.................................................................................................................................................................................................................................................................................................................................TTTAGAGGGTCGTGAGGTCAT...............2111.00101
............................................................................................................................................................................................................................................................................................................................................GTGAGGTCATCATGGTGA.......1811.00110
................................................................................................................................................................................................................................................................................................................................ATTTAGAGGGTCGTGAGGTC.................2011.00110
.........................................................................................................................................................................................................................................................................................................................GAGTGCCATTTAGAGGGTCGT.......................2111.00110
...............................................................................................................................................................................................................................................................................................................................CATTTAGAGGGTCGTGAGGT..................2011.00110
................................................................................................................................................................................................................................................................................................................................ATTTAGAGGGTCGTGAGGT..................1911.00110
droAna3
AGGATAATCATGGATTGGCCCTTGGCCGTCTGGCTTCTATTGTGGAACAGGTGAGAGCAAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
................GGCCCTTGGCCGTCTGGCTTCTA..............................................................................................................................................................................................................................................................................................................................2311.001100000
................GGCCCTTGGCCGTCTGGCTTCTATTGT..........................................................................................................................................................................................................................................................................................................................2711.001010000
.GGATAATCATGGATTGGCC.................................................................................................................................................................................................................................................................................................................................................1911.001000010
.......TCATGGATTGGCCCTTGGC...........................................................................................................................................................................................................................................................................................................................................1911.001001000
.............................CTGGCTTCTATTGTGGAACAGGTTGC..............................................................................................................................................................................................................................................................................................................2611.001000010
...ATAATCATGGATTGGCCCTTGGCCGT........................................................................................................................................................................................................................................................................................................................................2611.001000010
.....AATCATGGATTGGCCCTTGGCCGTCTG.....................................................................................................................................................................................................................................................................................................................................2711.001010000
droBip1
AGGATAATCATGGACTGGCCCTTGGCCGTCTGGCCTCTATTGTGGAGCAGGTGAGAGCTAAG-----GATAT---ATAATATTCCTCATACACAGCAAGC--------------------------------------------------------------------------------------------------------------AGAGATCAAA-------------------------------------TACCTTCTAGCAACTGATTTAATTTAATATTTAACA-TT--TTTTGACAGGTTGCCGAGTGTCACTTGGAGGGTCGTGAAGTGATGATGGTGACCAGTGGSizeHit CountTotal NormTotal
No Reads
droKik1
AGGATAACCATGGACTGGCCCTCGGGCGACTGGCCTCCATAGTGGAGCAGGTAAATAAA--G----------------------------------------------------GAATATTAGAGAAATAAATAAATATCTTC---------------------------------------------A--A--------------------------------------------------ACATTAT--------------------------------------------AATTACC--CTTAGGTGGCCGAGTGCCATTTGGAGGGGCGTGAGGTGATGATGGTCACCAGTGGSizeHit CountTotal NormTotal
No Reads
droFic1
CCGTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCGGCAGGTCGCCGAGTGCCATTTGGAGGGCCGCGAGGTAATGATGGTCACCAGCGGSizeHit CountTotal NormTotal
No Reads
droEle1
TT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTGTTCAGGTTGCCGAGTGCCACTTGGAGGGTCGTGAGGTGATGATGGTCACCAGTGGSizeHit CountTotal NormTotal
No Reads
droRho1
AGGACAACCATGGACTAGCCCTGGGGCGACTGGCCTCCATCGTGGAGCAGGTAAGATTTGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CACCGTATTACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTGACTGACAGGTTGCCGAGTGCCACTTAGAGGGCCGTGAGGTGATGATGGTCACCAGTGGSizeHit CountTotal NormTotal
No Reads
droTak1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGTGGCCGAGTGTCATTTGGAGGGTCGTGAGGTGATGATGGTCACCAGTGGSizeHit CountTotal NormTotal
No Reads
droEug1
AGGACAACCATGGACTAGCCCTTGGTCGACTGGCCTCTATCGTAGAACAGGTTAGATAAGTTCTACTCTTCTGCATTTCTCT-TAATAGTTCCTTCCGGGAAATTAAAT-----GAATTTGT----GG---------------TAATCTTGGTATTATCCAGTTTTATCACAAGCTTTTATCGT--AAA--TCATCTCCGAATTTTAAGTAAAATTATAATTAGT--------------------------------TACAT--------------------------------TTTCATTTGACAGGTGGCCGAGTGCCATTTGGAGGGCCGTGAGGTGATGATGGTGACCAGCGGSizeHit CountTotal NormTotal
No Reads
dm3
AGGACAACCATGGACTAGCCCTCGGCCGTCTGGCCTCTATTGTGGAGCAGGTAGGCATTAAA-----TATTT---TTTCTAT-CTATATTTTCAGCAGGA--------------------------------------------------------------------------------------------------------------AAAGTAACAACTGGCACAAAGTCATATTCTAA-------GATATTATTACAT--GCGTATCTTCTTCAATTCTTCACCCAAAA-----CCTCGATAGGTTGCCGAGTGCCATTTGGAAGGACGTGAAGTGATGATGGTCACCAGCGGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................GTCTGGCCTCTATTGTGGAGCAG...................................................................................................................................................................................................................................................................................................................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....CAACCATGGACTAGCCCTCGGC...........................................................................................................................................................................................................................................................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAAGGACGTGAAGT..................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........ATGGACTAGCCCTCGGCC..........................................................................................................................................................................................................................................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ATTTGGAAGGACGTGAAGT..................1913.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGCCGAGTGCCATTTGGAAGGAC.........................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GAGTGCCATTTGGAAGGAC.........................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
........CATGGACTAGCCCTCGGCCG.........................................................................................................................................................................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000
.......................................................................................................................................................................................................................................................................................................................................AGGACGTGAAGTGATGATGGT.........2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAAGGACGTGAAGTGAT...............2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GAAGGACGTGAAGTGATGATGGT.........2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TTGCCGAGTGCCATTTGGAAGGAC.........................2412.002000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................................................................................................................AAGGACGTGAAGTGATGATGGTC........2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AGGACGTGAAGTGATGATGGTC........2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................................................ATTTGGAAGGACGTGAAGTGATGATG...........2612.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................GGACGTGAAGTGATGATGGT.........2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GGAAGGACGTGAAGTGAT...............1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAACCATGGACTAGCCCTCGG............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATGGACTAGCCCTCGGCCGTCTGGC...................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GAAGGACGTGAAGTGATGATGGTC........2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCGGCCGTCTGGCCTCTATTGTGGAGCA....................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...........................GTCTGGCCTCTATTGTGGAGCA....................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
....................CTCGGCCGTCTGGCCTCTATTGTGGAGCA....................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.......................................................................................................................................................................................................................................................................................TTCTTCACCCAAAA-----CCTCG......................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GGTTGCCGAGTGCCATTTGGAAG............................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CCATTTGGAAGGACGTGAAGTGAT...............2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAAGGACGTGAAGTGAT...............2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GTTGCCGAGTGCCATTTGGAA.............................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ATTTGGAAGGACGTGAAGTGAT...............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......CCATGGACTAGCCCTCGGCC..........................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................GTCTGGCCTCTATTGTGGAGCAGGT.................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GACAACCATGGACTAGCCC................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CGAGTGCCATTTGGAAGGA..........................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................................................................................................................................................................................AAGGACGTGAAGTGATGATGGTCACC.....2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................................................................................................TGGAAGGACGTGAAGTGA................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACAACCATGGACTAGCCCTCGGCC..........................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........ATGGACTAGCCCTCGGCCGTCT......................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GGACAACCATGGACTAGCCCTC..............................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AAGTGATGATGGTCACCA....1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GACGTGAAGTGATGATGGT.........1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GCCGAGTGCCATTTGGAA.............................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AGGACGTGAAGTGATGATGGTCACCA....2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AAGGACGTGAAGTGATGATG...........2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAAGGACGTGAA....................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GTGATGATGGTCACCAGCG.1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CACCCAAAA-----CCTCGATAC..................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTGGAAGGACGTGAAGTGATGA.............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....CAACCATGGACTAGCCCTCGGCCGT........................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CGTGAAGTGATGATGGTC........1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGCCGAGTGCCATTTGGAA.............................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAACCATGGACTAGCCCTCGGCC..........................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GACGTGAAGTGATGATGGTCACCA....2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CCATTTGGAAGGACGTGAAGT..................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GAGTGCCATTTGGAAGGACGTGA.....................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TGCCATTTGGAAGGACGTGAAGTGAT...............2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAAGGACGTGAAGTGAT...............2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GAGTGCCATTTGGAAGGACGT.......................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TGGAAGGACGTGAAGTGATGAT............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GTTGCCGAGTGCCATTTGGAAG............................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CGAGTGCCATTTGGAAG............................1711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GACTAGCCCTCGGCCGTCTGGC...................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CATGGACTAGCCCTCGGCC..........................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AGTGCCATTTGGAAGGACGT.......................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GACAACCATGGACTAGCCCT...............................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TAGCCCTCGGCCGTCTGGCCT.................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TCTGGCCTCTATTGTGGAGCAG...................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GTGAAGTGATGATGGTCACCAG...2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GGTTGCCGAGTGCCATTTGGA..............................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTGGAAGGACGTGAAGTGAT...............2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CTGGCCTCTATTGTGGAGCAG...................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAAGGACGTGAAGTG.................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.........ATGGACTAGCCCTCGGCCGT........................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAAGGACGTGAAG...................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................................ACGTGAAGTGATGATGGTCACCAG...2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ATTTGGAAGGACGTGAAGTGATGA.............2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TCAATTCTTCACCCAAAA-----CCTCGATA...................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTTGGAAGGACGTGAAGTGATGATG...........2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................................................GGA--------------------------------------------------------------------------------------------------------------AAAGTAACAACTGGCAC..................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAAGGACGTGAAGT..................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................TGGCCTCTATTGTGGAGCAGGT.................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GGCCTCTATTGTGGAGCAGGTT................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CATGGACTAGCCCTCGGCCGTCT......................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CTCTATTGTGGAGCAGGTT................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTAGCCCTCGGCCGTCTG.....................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......ACCATGGACTAGCCCTCGGCCGTCTG.....................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TGCCGAGTGCCATTTGGAAG............................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................ACGTGAAGTGATGATGGTCAC......2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...ACAACCATGGACTAGCCCTCGGCCGT........................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACCATGGACTAGCCCTCGGC...........................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CATGGACTAGCCCTCGGC...........................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ATTTGGAAGGACGTGAATC..................1920.501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGGACAACCATGGACTAGCACTCGGCCGACTGGCGTCTATTGTGGAGCAGGTAGGCATTAAA-----TATCT---GTTATAT-CTTAATTTTCACCAGGA--------------------------------------------------------------------------------------------------------------AAAGTTACAACTAGCACAAAGTAATATTCTTA-------TATATTATTACAT--TCGCAATTTCTTCAATTCTTCACCCAACA-----ACTCGATAGGTTGCCGAGTGCCATTTGGAGGGACGTGAGGTGATGATGGTCACCAGCGGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
....CAACCATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................23138.0038035300000000000000
.....AACCATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................22112.0012011100000000000000
........CATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................1918.00804400000000000000
..GACAACCATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................2517.00704020000000100000
.GGACAACCATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................2616.00605100000000000000
.GGACAACCATGGACTAGCACTC..............................................................................................................................................................................................................................................................................................................................................2216.00604200000000000000
.........ATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................1815.00503200000000000000
.............................CTGGCGTCTATTGTGGAGC.....................................................................................................................................................................................................................................................................................................................1913.00302100000000000000
....CAACCATGGACTAGCACT...............................................................................................................................................................................................................................................................................................................................................1813.00301110000000000000
.....AACCATGGACTAGCACTC..............................................................................................................................................................................................................................................................................................................................................1813.00302100000000000000
.........ATGGACTAGCACTCGGCCGACTGGC...................................................................................................................................................................................................................................................................................................................................2513.00303000000000000000
................................................................................................................................................................................................................................................................................................................................ATTTGGAGGGACGTGAGGT..................1913.00300030000000000000
.....AACCATGGACTAGCACTCGGCCGACTGGC...................................................................................................................................................................................................................................................................................................................................2912.00202000000000000000
........CATGGACTAGCACTCGGCCGAC.......................................................................................................................................................................................................................................................................................................................................2212.00200200000000000000
.....AACCATGGACTAGCACTCGGCCGACT......................................................................................................................................................................................................................................................................................................................................2612.00202000000000000000
.....AACCATGGACTAGCACTCGGCCGAC.......................................................................................................................................................................................................................................................................................................................................2512.00202000000000000000
.......CCATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................2012.00202000000000000000
.....AACCATGGACTAGCACTCG.............................................................................................................................................................................................................................................................................................................................................1912.00202000000000000000
.....AACCATGGACTAGCACTCGGC...........................................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
......ACCATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
...........................GACTGGCGTCTATTGTGGAGC.....................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
.........ATGGACTAGCACTCGGCCGACTGGCGTCT...............................................................................................................................................................................................................................................................................................................................2912.00200200000000000000
....CAACCATGGACTAGCACTCGGCCGACT......................................................................................................................................................................................................................................................................................................................................2712.00201010000000000000
....CAACCATGGACTAGCACTCGGC...........................................................................................................................................................................................................................................................................................................................................2212.00201100000000000000
........CATGGACTAGCACTCGGC...........................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
.........ATGGACTAGCACTCGGCCGACTGGCGTC................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
..GACAACCATGGACTAGCACTC..............................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.........ATGGACTAGCACTCGGCCGACTGGCGTCC...............................................................................................................................................................................................................................................................................................................................2911.00100100000000000000
...ACAACCATGGACTAGCACT...............................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
....CAACCATGGACTAGCACTCGGCCG.........................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
............GACTAGCACTCGGCCGACTGGCGTCT...............................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................TGCCGAGTGCCATTTGGAGGGAC.........................2311.00101000000000000000
........CATGGACTAGCACTCGGCCGACTGGC...................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
...ACAACCATGGACTAGCACTCGGC...........................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
....CAACCATGGACTAGCACTCGGCCGA........................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
.........ATGGACTAGCACTCGGCCGACTGGCGC.................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGTGAGGTGATGAT............2811.00100010000000000000
...................................................................................................................................................................................................................................................................................TCAATTCTTCACCCAACA-----ACTCG......................................................2311.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................TTTGGAGGGACGTGAGGTGA................2011.00100000000000100000
.....AACCATGGACTAGCACTCGGCCGA........................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGTGAGGT..................2211.00100010000000000000
...........................GACTGGCGTCTATTGTGGAGCAGGT.................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
..............CTAGCACTCGGCCGACTGGCGTC................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
.........ATGGACTAGCACTCGGCCGACTGGCGT.................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGACGT.......................1911.00100010000000000000
....................................CTATTGTGGAGCAGGT.................................................................................................................................................................................................................................................................................................................1611.00100000001000000000
......ACCATGGACTAGCACTCGGCCGACTGG....................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
.......................GGCCGACTGGCGTCTATTGTGGAGC.....................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.............................CTGGCGTCTATTGTGGAGCAG...................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.........................CCGACTGGCGTCTATTGTGGAGCAGGT.................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
...ACAACCATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.........ATGGACTAGCACTCGGCCGACT......................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGTGA.....................1911.00100010000000000000
.GGACAACCATGGACTAGCACTCGGC...........................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.......CCATGGACTAGCACTCGGCCGACTGGCGT.................................................................................................................................................................................................................................................................................................................................2911.00101000000000000000
...........................GACTGGCGTCTATTGTGGAGCAGG..................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................CGTGAGGTGATGATGGTCA.......1911.00100000000000100000
........CATGGACTAGCACTCGGCCGACTGGCGT.................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
droSec2
AGGACAACCATGGACTAGCACTCGGCCGACTGGCGTCTATTGTGGAGCAGGTAGGCATTAAA-----TATCT---GTTATAT-CTTAATTTTCACCAGGA--------------------------------------------------------------------------------------------------------------AAAGTTACAACTAGCACAAAGTAATATTCTTA-------TATATTATTACAT--TCGCAATTTCTTCAATTCTTCACCCAACA-----ACTCGATAGGTTGCCGAGTGCCATTTGGAGGGACGTGAAGTGATGATGGTCACCAGCGGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...........................GACTGGCGTCTATTGTGGAGCAGGT.................................................................................................................................................................................................................................................................................................................2513.0030300
.........................................................................................................................................................................................................................................................................................................................................GACGTGAAGTGATGATGGTC........2012.0020110
..................................GTCTATTGTGGAGCAGGT.................................................................................................................................................................................................................................................................................................................1812.0020011
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGACGTGAAGT..................2412.0020200
........................................................................................................................................................................................................................................................................................................................CGAGTGCCATTTGGAGGGAC.........................2012.0020200
......................................................................................................................................................................................................................................................................................................................................AGGGACGTGAAGTGATGATGGTC........2311.0010010
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGACGTGAAGTG.................2511.0011000
............................................................................................................................................................................................................................................................................................................................................GTGAAGTGATGATGGTCACCAGC..2311.0010100
............................................................................................................................................................................................................................................................................................................................................GTGAAGTGATGATGGTCACCA....2111.0010100
......................................................................................................................................................................................................................................................................................................................GCCGAGTGCCATTTGGAGGGA..........................2111.0010100
........CATGGACTAGCACTCGGCCGACTGGCGT.................................................................................................................................................................................................................................................................................................................................2811.0010100
.........................................................................................................................................................................................................................................................................................................................................GACGTGAAGTGATGATGGTCAC......2211.0010010
........CATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................1911.0010100
......................CGGCCGACTGGCGTCTATTGTGGAGCA....................................................................................................................................................................................................................................................................................................................2711.0010100
....................................................................................................................................................................................................................................................................................................................TTGCCGAGTGCCATTTGGAGGGA..........................2311.0010100
...........GGACTAGCACTCGGCCGA........................................................................................................................................................................................................................................................................................................................................1811.0010010
...........................GACTGGCGTCTATTGTGGAGCAGG..................................................................................................................................................................................................................................................................................................................2411.0010100
..GACAACCATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................2511.0010100
................AGCACTCGGCCGACTGGCGTCTA..............................................................................................................................................................................................................................................................................................................................2311.0010100
..............CTAGCACTCGGCCGACTGGC...................................................................................................................................................................................................................................................................................................................................2011.0010010
.....................................................................................................................................................................................................................................................................................................................TGCCGAGTGCCATTTGGAGGGA..........................2211.0010010
...ACAACCATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................2411.0010100
..............................TGGCGTCTATTGTGGAGCAGGT.................................................................................................................................................................................................................................................................................................................2211.0011000
...........................GACTGGCGTCTATTGTGGAGCA....................................................................................................................................................................................................................................................................................................................2211.0010100
.................................CGTCTATTGTGGAGCAGGT.................................................................................................................................................................................................................................................................................................................1911.0010100
.....AACCATGGACTAGCACTC..............................................................................................................................................................................................................................................................................................................................................1811.0010010
......ACCATGGACTAGCACTCGGC...........................................................................................................................................................................................................................................................................................................................................2011.0010010
................................................................................................................................................................................................................................................................................................................................ATTTGGAGGGACGTGAAGTGATGATG...........2611.0010100
...........................GACTGGCGTCTATTGTGGAG......................................................................................................................................................................................................................................................................................................................2011.0010100
............................................................................................................................................................................................................................................................................................................................................GTGAAGTGATGATGGTCACCAGCGG2511.0010010
...........................GACTGGCGTCTATTGTGG........................................................................................................................................................................................................................................................................................................................1811.0010010
..GACAACCATGGACTAGCACTCGGC...........................................................................................................................................................................................................................................................................................................................................2411.0010100
.....AACCATGGACTAGCACTCGGCC..........................................................................................................................................................................................................................................................................................................................................2211.0010100
..................................................................................................................................................................................................................................................................................................................GGTTGCCGAGTGCCATTTGGAGGGAC.........................2611.0010100
............................................................................................................................................................................................................................................................................................................................................GTGAAGTGATGATGGTCA.......1811.0010010
droYak3
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTGCCGAGTGCCATTTGGAGGGACGTGAGGTGATGATGGTCACCAGTGGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.........................................................................................................................................................................................................................................................................................................................................GACGTGAGGTGATGATGGT.........1921.00200000020000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGACGTGAGGTGATGATG...........2721.00201000010000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGACGTGAGGT..................2021.00200000110000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGACGTGAGGTGATGATGGT.........2921.00200000020000
..............................................................................................................................................................................................................................................................................................................................CCATTTGGAGGGACGTGAGGTGATGATG...........2821.00200000020000
.................................................................................................................................................................................................................................................................................................................................TTTGGAGGGACGTGAGGTGATGATGGT.........2720.50100000010000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGTGAGGTG.................2320.50100000010000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGTGA.....................1920.50100000010000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGTGAGGTGATGAT............2820.50100000010000
.................................................................................................................................................................................................................................................................................................................................TTTGGAGGGACGTGAGGTGATGATG...........2520.50100010000000
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGACGTGAGGTGAT...............2720.50100000010000
........................................................................................................................................................................................................................................................................................................................CGAGTGCCATTTGGAGGGACGTG......................2320.50100000010000
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGACGTGA.....................2120.50100000010000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGTGAGGTGAT...............2520.50101000000000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGTGAGGTGATGATG...........2920.50100000010000
.........................................................................................................................................................................................................................................................................................................................................GACGTGAGGTGATGATGGTC........2020.50100100000000
.....................................................................................................................................................................................................................................................................................................................................GAGGGACGTGAGGTGATGATGGT.........2320.50100000010000
................................................................................................................................................................................................................................................................................................................................ATTTGGAGGGACGTGAGGTGATGATGGT.........2820.50100000010000
.........................................................................................................................................................................................................................................................................................................................GAGTGCCATTTGGAGGGA..........................1820.50100000010000
..........................................................................................................................................................................................................................................................................................................................AGTGCCATTTGGAGGGACGTGAGGT..................2520.50100000010000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGACGTGAGGTGA................2220.50100000010000
......................................................................................................................................................................................................................................................................................................................GCCGAGTGCCATTTGGAGGGAC.........................2220.50100000010000
......................................................................................................................................................................................................................................................................................................................GCCGAGTGCCATTTGGAGGGACGTGAG....................2720.50100000010000
.........................................................................................................................................................................................................................................................................................................................................GACGTGAGGTGATGATGGTCACCA....2420.50100000010000
...................................................................................................................................................................................................................................................................................................................GTTGCCGAGTGCCATTTGGAGGGACGTG......................2820.50100000010000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGACGTGAGGTGATGA.............2520.50100000010000
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGACGTG......................2020.50100000010000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGACGTGAGGTGAT...............2320.50100000010000
...................................................................................................................................................................................................................................................................................................................GTTGCCGAGTGCCATTTGGAGGGA..........................2420.50100010000000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGTGAGGTGATG..............2620.50100000010000
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGTGAGGT..................2220.50100000010000
................................................................................................................................................................................................................................................................................................................................ATTTGGAGGGACGTGAGGTGATGATG...........2620.50100000010000
............................................................................................................................................................................................................................................................................................................................TGCCATTTGGAGGGACGTG......................1920.50100000010000
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGACGTGAGGT..................2420.50100000010000
droEre2
AGGACAACCATGGACTAGCCCTCGGCCGCCTGGCGTCTATTGTGGAGCAGGTAAGGTCTACA-----AATCT---GTTATGT-CT--------------------------------------------------------TCAAACCCTATTATTACT------------------------T-----------------------------------------------------------------TACATTAATATGC--TGGTA----------------------------ATTTCGATAGGTTGCCGAGTGCCATTTGGAGGGACGCGAGGTGATGATGGTCACCAGCGGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
................................................................................................................................................................................................................................................................................................................................ATTTGGAGGGACGCGAGGT..................1918.0083000320
..........................................................................................................................................................................................................................................................................................................................AGTGCCATTTGGAGGGACGCGAGGT..................2515.0050000500
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGACGCGAGGT..................2014.0040000130
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGCGAGGTGA................2413.0030000210
...........................GCCTGGCGTCTATTGTGGAGCAG...................................................................................................................................................................................................................................................................................................................2313.0030000120
..............CTAGCCCTCGGCCGCCTGGC...................................................................................................................................................................................................................................................................................................................................2013.0031200000
...........................GCCTGGCGTCTATTGTGGAGCA....................................................................................................................................................................................................................................................................................................................2213.0031000020
............GACTAGCCCTCGGCCGCCT......................................................................................................................................................................................................................................................................................................................................1912.0021000010
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGACGC.......................1912.0021000100
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGCGAGGT..................2212.0020000200
...........................................................................................................................................................................................................................................................................................................................GTGCCATTTGGAGGGACGCGAGGT..................2412.0020000200
......................................................................................................................................................................................................................................................................................................................GCCGAGTGCCATTTGGAGGGACGCG......................2512.0021000100
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGACGCGAGGTG.................2111.0010001000
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGACGCGAGGC..................2011.0010100000
...........................GCCTGGCGTCTATTGTGG........................................................................................................................................................................................................................................................................................................................1811.0010000010
.......CCATGGACTAGCCCTCGGCCGC........................................................................................................................................................................................................................................................................................................................................2211.0010010000
.....AACCATGGACTAGCCCTCGGC...........................................................................................................................................................................................................................................................................................................................................2111.0010000100
..GACAACCATGGACTAGCCCT...............................................................................................................................................................................................................................................................................................................................................2011.0010000010
................................................................................................................................................................................................................................................................................................................................ATTTGGAGGGACGCGAGGTGAT...............2211.0010000100
.............................CTGGCGTCTATTGTGGAGCAGGTTGC..............................................................................................................................................................................................................................................................................................................2611.0010000100
...............................................................................................................................................................................................................................................................................................................................CATTTGGAGGGACGCGAGGTGA................2211.0010000100
..GACAACCATGGACTAGCCCTCGGC...........................................................................................................................................................................................................................................................................................................................................2411.0010000010
........................................................................................................................................................................................................................................................................................................................................GGACGCGAGGTGATGATGGTCACCA....2511.0010000100
.................................................................................................................................................................................................................................................................................................................AGGTTGCCGAGTGCCATTTGGAGG............................2411.0010000010
.......CCATGGACTAGCCCTCGGCC..........................................................................................................................................................................................................................................................................................................................................2011.0010000010
....................................................................................................................................................................................................................................................................................................................................GGAGGGACGCGAGGTGAT...............1811.0010000100
.............................................................................................................................................................................................................................................................................................................................GCCATTTGGAGGGACGCGAG....................2011.0010000100
........................................................................................................................................................................................................................................................................................................................................GGACGCGAGGTGATGATGG..........1911.0011000000
.....AACCATGGACTAGCCCTCGGCC..........................................................................................................................................................................................................................................................................................................................................2211.0011000000
..............................................................................................................................................................................................................................................................................................................................CCATTTGGAGGGACGCGA.....................1811.0011000000
...........................GCCTGGCGTCTATTGTGGAGCAGG..................................................................................................................................................................................................................................................................................................................2411.0010000100
..................................GTCTATTGTGGAGCAGGTTGC..............................................................................................................................................................................................................................................................................................................2121.0020000110
......................................................................................................................................................................................................................................................................................................................................AGGGACGCGAGGTGATGATGGTCAC......2511.0010000100
..................................................................................................................................................................................................................................................................................................................GGTTGCCGAGTGCCATTTGGA..............................2111.0010000010
..............................................................................................................................................................................................................................................................TAATATGC--TGGTA----------------------------ATTTCGATAG..................................................2311.0010000010
.................................................................................................................................................................................................................................................................................................................AGGTTGCCGAGTGCCATTTGGAG.............................2311.0010000100
.GGACAACCATGGACTAGCCCT...............................................................................................................................................................................................................................................................................................................................................2111.0010000010
............................................................................................................................................................................................................................................................................................................................................GCGAGGTGATGATGGTCACC.....2011.0010000010
..................................................................................................................................................................................................................................................................................................................................TTGGAGGGACGCGAGGTG.................1811.0010000100
...........................GCCTGGCGTCTATTGTGGAGC.....................................................................................................................................................................................................................................................................................................................2111.0010000010
............GACTAGCCCTCGGCCGCCTGGCGT.................................................................................................................................................................................................................................................................................................................................2411.0010000010
...........................GCCTGGCGTCTATTGTGGA.......................................................................................................................................................................................................................................................................................................................1911.0010000010

Generated: 10/20/2015 at 07:13 PM