ID:

dps_3321

 Coordinate:

XR_group8:4885934-4886084 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.1 -8.9 -8.8

Flybase annnotation

CDS [Dpse\GA28583-cds]; exon [dpse_GLEANR_8529:3]; intron [Dpse\GA28583-in]

Repeatable elements

NameClassFamilyStrand
(CAA)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTACAGTGAAGACTACAACAGTAAAGACAACTCCCAAGCCGACAACTACGAAAACAACTACAGTGAAGACTACAACAGTAAAGACAACTCCTAAGCCGACAACTCCGAAAACAACTACAGTGCAGACTACAACAATAGAGACAACTCCGAAAACAACAACCGAAAAAACAACGCCGACGACAACATCTGGGCGCCCCACAGATTCGACAACGTTACGACCAACCACGAGACCATCAACTTCTACTACTCCT
**************************************************.......((.((.((.((..(((....)))................((.......)).......)).)).)).))............(((....)))........................((((..............))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902011
testis
 GSM343916
embryo
 SRR902010
ovaries
.............TACAACAGTAAAGACAACTCCCAAGC.................................................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0
......................................................................TACAACAGTAAAGACAACTCCTAAGCC.......................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
......................................................................TACAACAGTAAAGACAACTCCTAAGC........................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
.............TACAACAGTAAAGACAACTCCCAA...................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
..........................ACAACTCCCAAGCCGACAACTACG......................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.............TACAGCAGTAAAGACAACTCCC........................................................................................................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0
...................................................................................ACAACTCCTAAGCCGACAACTCCGA............................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...................................................................................ACAACTCCTAAGCCGACAACTCC................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0
............CTACAACAGTAAAGACAACTCCCAAGC.................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...................................................................................ACAACTCCTAAGCCGACAACTC.................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................ACGCCGAAGAGAACAACCGAAAAA.................................................................................... 24 3 1 1.00 1 1 0 0 0 0
.............TACAACAGTAAAGACAACTCCCAAGCC................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..............................................................................TAAAGACAACTCCTAAGCCGATAACTCC................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0
...............................................................................AAAGACAACTCCTAAGCCAACAACTCCGA............................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0
...............................................................................AAAGACAACTCCTAGGCCGACAACT................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.......................................................................ACAACAGTAAAGACAACTCCTAAGC........................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.......................................................................ACAACAGTAAAGACAACTCCTAAGCC.......................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
................................CCCAAGCCGACAACTACGAAAACAAC................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
................................................CGAAAACAACTACTGTGAAGA...................................................................................................................................................................................... 21 1 3 0.67 2 0 0 2 0 0
..................................................................................................ACAACTCCGAAAACAACTACAGTG................................................................................................................................. 24 0 2 0.50 1 0 0 0 0 1
......................AAAGACAACTCCCAAGCCGACAAC............................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
.......................................................................ACAACAGTAAAGACAACTCC................................................................................................................................................................ 20 0 2 0.50 1 0 0 0 1 0
....................................................AACAACTACAGTGAAGACTACA................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0
.........................................................................AACAGTAAAGACAACTCCAAAGCCAAC....................................................................................................................................................... 27 2 2 0.50 1 0 1 0 0 0
.............TACAACAGTAAAGACAACTCCAAAGC.................................................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
................AACAGTAAAGACAACTCCAAAGCCAAC................................................................................................................................................................................................................ 27 2 2 0.50 1 0 1 0 0 0
.....................TAAAGACAACTCCCAAGCCGACAAC............................................................................................................................................................................................................. 25 0 2 0.50 1 0 0 1 0 0
......................................................................TACAACAGTAAAGACAACTCC................................................................................................................................................................ 21 0 2 0.50 1 1 0 0 0 0
......................................................................TACAACAGTAAAGACAACTCCAAAGC........................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
.............TACAACAGTAAAGACAACTCC......................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
..............ACAACAGTAAAGACAACTCC......................................................................................................................................................................................................................... 20 0 2 0.50 1 0 0 0 1 0
.............TACGACAGTAAAGACGACTCCCAAG..................................................................................................................................................................................................................... 25 2 7 0.14 1 1 0 0 0 0
....................................................................................................................................................................................................................................GACCATCAACTACCTCTACT... 20 3 12 0.08 1 0 0 0 1 0
..................................................................................................................................................CCGAAAACAACGACCGTAA...................................................................................... 19 2 13 0.08 1 1 0 0 0 0

Anti-sense strand reads

GATGTCACTTCTGATGTTGTCATTTCTGTTGAGGGTTCGGCTGTTGATGCTTTTGTTGATGTCACTTCTGATGTTGTCATTTCTGTTGAGGATTCGGCTGTTGAGGCTTTTGTTGATGTCACGTCTGATGTTGTTATCTCTGTTGAGGCTTTTGTTGTTGGCTTTTTTGTTGCGGCTGCTGTTGTAGACCCGCGGGGTGTCTAAGCTGTTGCAATGCTGGTTGGTGCTCTGGTAGTTGAAGATGATGAGGA
**************************************************.......((.((.((.((..(((....)))................((.......)).......)).)).)).))............(((....)))........................((((..............))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 V112
male body		 SRR902011
testis
 M062
head
 GSM444067
head
 GSM343916
embryo
......................................................................................................................................................................................................................................GGTAGTCGAGGATGATGA... 18 2 13 5.85 76 69 0 7 0 0 0 0
...............GTTGTCATTTCTGTTGAGGGT....................................................................................................................................................................................................................... 21 0 1 4.00 4 2 2 0 0 0 0 0
............GATGTTGTCATTTCTGTTGAGGGT....................................................................................................................................................................................................................... 24 0 1 3.00 3 0 3 0 0 0 0 0
.........TCTGATGTTGTCATTTCTGTTGAGGGT....................................................................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0
...................................................TTAGTTGATGTCACTTCTGATGTTGT.............................................................................................................................................................................. 26 1 2 2.00 4 0 4 0 0 0 0 0
...................................................TTAGTTGATGTCACTTCTGATGTT................................................................................................................................................................................ 24 1 2 2.00 4 0 0 0 4 0 0 0
..............................................................................................CGGCTGTTGAGGCTTTTGTTGATGT.................................................................................................................................... 25 0 3 1.67 5 1 3 0 1 0 0 0
.....................................................................................................................................................................................................................................TGGTAGTCGAGGATGATGA... 19 2 4 1.25 5 2 0 3 0 0 0 0
.....................................................................................................................................................................................................................................TGGTAGTCGAGGATGATG.... 18 2 11 1.18 13 12 0 1 0 0 0 0
....................................................................................................................................................................CCTTGTTGCGGCTGCTGTTGT.................................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................GGTAGTTGAGGATGATGA... 18 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................TCGGCTGTTGAGGCTTTTGTTGATGT.................................................................................................................................... 26 0 3 1.00 3 3 0 0 0 0 0 0
.............ATGTTGTCATTTCTGTTGAGGGTTC..................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
...............................................TGCTTTTGTTGATGTCACTTCTGAT................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................GGTGTCTAAGCTGTTGCAAT.................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................GGCTGTTGAGGCTTTTGTTGAT...................................................................................................................................... 22 0 3 1.00 3 3 0 0 0 0 0 0
........................................................................................................GGCTTTTGTTGATGTCACGTCTGATGT........................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................CGGCTGTTGAGGCTTTTGTTGAT...................................................................................................................................... 23 0 3 1.00 3 2 1 0 0 0 0 0
.......................................................................................GAGGATTCGGCTGTTGAGGCTTTT............................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0
GATGTCACTTCTGGTGTTGTCATTTCT................................................................................................................................................................................................................................ 27 1 2 1.00 2 0 2 0 0 0 0 0
............GATGATGTCATTTCTGTTGAGGGT....................................................................................................................................................................................................................... 24 1 1 1.00 1 0 0 0 1 0 0 0
...............GTTGTCATTTCTGTTGAAGGTTCGGCT................................................................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................GTTGAGGCTTTTGTTGATGTCACGT............................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................TGTCATTTCTGTTGAGGATTCGGCT........................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0
.......................................................................................GAGGATTCGGTTGTTGAGGCTTTA............................................................................................................................................ 24 2 1 1.00 1 1 0 0 0 0 0 0
.....................................................................GGTGTTGTCATTTCTGTTGAGGAT.............................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................GTTGAGGATTCGGCTGTTGAGGCTT.............................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................GATGTCACTTCTGGTGTTGTCATTTCT....................................................................................................................................................................... 27 1 2 1.00 2 0 2 0 0 0 0 0
...................................................................................................GTTGAGGCTTTTGTTGATGTCAC................................................................................................................................. 23 0 2 1.00 2 2 0 0 0 0 0 0
...........................................................................GTCATTTCTGTTGAGGATTCGGCTGT...................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................TTCTGATGTTGTCATTTCTGTTGAGGAT.............................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................GTCATTTCTGTTGAGGATTCGGT......................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0
..............TGTTGTCATTTCTGTTGAAGGT....................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................TCGGCTGTTGAGGCTTTTGTTGAT...................................................................................................................................... 24 0 3 0.67 2 1 1 0 0 0 0 0
................................................................CTTCTGATGTTGTCATTTCTG...................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
...................................................TTAGTTGATGTCACTTCTGATGTTGTCAT........................................................................................................................................................................... 29 1 2 0.50 1 1 0 0 0 0 0 0
..........................................................ATGTCACTTCTGATGTTGTCATT.......................................................................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0 0
.......CTTCTGATGTTGTCATTTCTG............................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
........................................................TGATGTCACTTCTGATGTTGTCAT........................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
GATGTCACTTCTGATGTTGTCAT.................................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................GATGTCACTTCTGATGTTGTCAT........................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
.....................................................AGTTGATGTCACTTCTGATGTTGTCAT........................................................................................................................................................................... 27 1 2 0.50 1 0 0 0 0 0 1 0
...................TCATTTCTGTTGAGGGTTCGGCTG................................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0
...................................................TTTGTTGATGTCACTTCTGGTGTT................................................................................................................................................................................ 24 1 2 0.50 1 1 0 0 0 0 0 0
..............................................................CACTTCTGATGTTGTCATTTCT....................................................................................................................................................................... 22 0 2 0.50 1 0 0 1 0 0 0 0
..........................................................ATGTCACTTCTGGTGTTGTCATTT......................................................................................................................................................................... 24 1 2 0.50 1 0 0 1 0 0 0 0
.................................................CTTTAGTTGATGTCACTTCTGATGT................................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0 0 0
.....CACTTCTGATGTTGTCATTTCT................................................................................................................................................................................................................................ 22 0 2 0.50 1 0 0 1 0 0 0 0
............................................................................................TTCGGCTGTTGAGGCTTTTGTT......................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0
.ATGTCACTTCTGGTGTTGTCATTT.................................................................................................................................................................................................................................. 24 1 2 0.50 1 0 0 1 0 0 0 0
......................................................GTTGATGTCACTTCTGATGTTG............................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0
......................................................GTTGATGTCACTTCTGATGTTGTCAT........................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................TGGTTCGTGCGCTGGTAGT............... 19 2 2 0.50 1 0 0 1 0 0 0 0
.ATGTCACTTCTGATGTTGTCATT................................................................................................................................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0 0 0
..................................................................................................TGTTGAGGCTTTTGTTGATGT.................................................................................................................................... 21 0 8 0.38 3 1 0 0 2 0 0 0
..............................................................................................CGGCTATTGAGGCTTTTGTTGATGT.................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0
..............................................................................................CGGCTGTTGAGGCTTTTGTTGATG..................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
........................................................TGAAGTCACTTCTGATGCTGTCATT.......................................................................................................................................................................... 25 2 3 0.33 1 1 0 0 0 0 0 0
...........................................................TGTCACTTCTGATGCTGTCATT.......................................................................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0
..............................................................................................CGGCTGTTGAGGCTTATGTTGATGT.................................................................................................................................... 25 1 3 0.33 1 0 1 0 0 0 0 0
..TGTCACTTCTGATGCTGTCATT................................................................................................................................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0
...............................................................................................GGCTGTTGAGGCTTTTGTTGATGT.................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
..............................................................................................CGGCTGTTGAGGCTTTAGTTGAT...................................................................................................................................... 23 1 4 0.25 1 1 0 0 0 0 0 0
.........TCTGATGCTGTCATTCCTGCTGAGGGT....................................................................................................................................................................................................................... 27 3 7 0.14 1 1 0 0 0 0 0 0
...........................................................................................................................................CTGTTGAGGCTTTTGTTGTT............................................................................................ 20 0 7 0.14 1 1 0 0 0 0 0 0
...............................................................................................GGTTGTTGAGGCTTTAGTTGATGT.................................................................................................................................... 24 2 9 0.11 1 1 0 0 0 0 0 0
........................TCTGTTGAGGGGTGGGCTG................................................................................................................................................................................................................ 19 2 9 0.11 1 0 0 1 0 0 0 0
..............................................................................................CGGTTGTTGAGGCTTTAGTTGAT...................................................................................................................................... 23 2 10 0.10 1 0 1 0 0 0 0 0
....TCACTTCTGATGCTGTCATTTCTGC.............................................................................................................................................................................................................................. 25 2 10 0.10 1 0 0 1 0 0 0 0
.............................................................TCACTTCTGATGCTGTCATTTCTGC..................................................................................................................................................................... 25 2 10 0.10 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................CAGTTGTTGCAGTGCTGGT.............................. 19 3 20 0.10 2 1 0 1 0 0 0 0
..............................................................................................CGGTTGTTGAGGCTTTAGTT......................................................................................................................................... 20 2 20 0.10 2 0 2 0 0 0 0 0
..............................................................................................CGGTTGTTGAGGCTTTAGTTGA....................................................................................................................................... 22 2 11 0.09 1 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................GTTGGTGCTATGGTGGTT.............. 18 2 11 0.09 1 1 0 0 0 0 0 0
.................................................................................................................................................AGGGTTTTGTTGCTGGCT........................................................................................ 18 2 13 0.08 1 1 0 0 0 0 0 0
................................................................................................................................................GAGGCTTGTGTTATTGGTTT....................................................................................... 20 3 20 0.05 1 0 0 0 0 0 0 1
................................................................................................................................................................................................................................TGCACTGGCAGTTGAACAT........ 19 3 20 0.05 1 1 0 0 0 0 0 0
..............................................................................................................................GATGGTGTTATCTCTGCAG.......................................................................................................... 19 3 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group8:4885884-4886134 + dps_3321 CTACAGTGAAGACTACAACAGTAAAG---ACAACTCCCA---------AGCCGACAACTA---CGAAAAC---AAC---TACAGT------GAAGACTACAACAGTAAAGA---CAACTCCTAA------GCCGACAACTC---------------CGAAAACAACT-----------------------AC---AGT--GCAGACTACAACAAT-------------------------------------AGAG---ACAACTCCGAAAACAACAACC-----------------------------G---------------A---AAAAACAACGCC---------------------------G---A------------------------------------CGAC------------------------------------------AACATCTGGGCGCCCCAC---------AG---ATTCGACAACGTT--ACG-A------CC---AACCAC------------------GAGACCATCAACTTC---------------TACTACTC--CT-
droPer2 scaffold_5:128090-128325 + CCACAACTACGACAACAACAACGACG---ACAACCACCA---------CTACTACAACCA---CCACTAC---GAC---AACCAC------CACTACTACAACCAC------------AACAAC------AACGACAACTA---------CAACTACTTGC------TCG-------------------------------ACAACAACAAC----------------------------------------CACGACGACAACCAC-----------------------------------------TACTACAACAA------C---CACTA------CT------A------CA---ACCACCACGACAA------------------------------------CAACAACCAC------------------TAC---------------AAC------------------------------TA------CAACCA---CGACAACGAC---AACCAC------------------GACAACAACCACTAC---------------TACAACGA--CT-
droWil2 scf2_1100000004512:1553429-1553673 - CAACAACTACAACAACAACAACAAAC---ACAACAACAA---------CAGCAACAACAACAAC---AACAACAAC---AACAAC------AACAACAACAACAACAACAA---CTACTACAGCA---------ACAACAA------------------CAACTACA----------------------------------ACAACAACTACAAC-------------------------------------AGCAACAACA---------------------------AC--------AACAACAACTACT------A------C---AACAA------CA------A------CA---ACTACAACAACAA------------------------------------------------------CAACAACCACAAC---------------AAC------------------------AA---------------CAA---CAACAACAAC------AACTACAACAAC---------AACAACAACAACAAC---------------AACTACTA--CT-
droVir3 scaffold_13049:21088921-21089143 - CCACAACAACTACAACCACGACAAAA---ACCACAACGA---------CGACAACAACGA---CAA---C---AAC---TACAAC------------------GACATCAA---CCACCACTACG---------AAAACAA------------CGACTACAGCTACA---------ACG-----------A---CTTG--TAGCACAACGACAAC-------------------------------------------------------------------------------AAC--C------ACAA---------C---TAC------GACAACAACTACAACGA------C------------AACAAC------------------------TACAACGACAACAAC------CA------CA------ACTAC---------------GAC------------------------------------AACAAC--CAC-AACT------------------------------ACGAAAC---CAACGAC---------------TACAAC--TAC--
droMoj3 scaffold_6540:24451758-24452001 - CCACGACAACGACAACAACCACGACA---ACAAC---CA---------CGACAACAACCA---CGACAAC---AAC---CACGAC------AACAACCACGACAACAACAA---CCACTACAAC------AACAACAACAC---------------CTTGTACGACA-----------------------AC--------GACAACGACAAC----------------------------------------GACAACGACA---------------------------AC--------GAC------AACGACAACAA------C---CACGA------CA------A------CA---ACCACGACAACGA------------------------------------CAACAACCAC------------------GAC---------------AACAACAT----------CAACACCTT--GTAC------------------GACAA---------CAACC---------------ACGACA---ACGACAAC---------------AACCAC--GAC--
droGri2 scaffold_3617:186-421 - CAACAACAACAACGACAACAACGACA---ACAACAACAA---------CGACGACAACCA---CAACGAC---AAC---CACAAC------GACGACCACAACAACGACAA---CTACTACCTGC---------ACAACAC------------C---A---ACA---ACAACAACGACAACTACTACCTG--CACA--ACACC------------------------AACAACGACAACAACAACAACGACA---------------------------------------------------------------------------------------ACA------A------C---------AACAACGA------------------------------------C---------GA---------------CAA---C------------CAC------------------------AA---CGA------CAACCA---CAACGACGAC------AACA---------------ACGACA---ACAACAAC---------------GACAACTA--CT-
droAna3 scaffold_12916:5910080-5910353 - CTACAACCCAGTCTACTTCAGAGTCT---ACAACAACGG---------AGTCTACAACAA---CGGAGTC---TAC---AACAAC------AGAGTCTACAACAACTGCAG---CTGCCACACA------------GTCTA------------------CAACAACG---------GAG-----------TCTACA--ACAACGGAATCTTC----------------------------------------------------------------AACAACGGAGTCTAC---AACAA--------------------------------------------------------CGGAGTCTAC---TACAACAGCAGCTGCTACACAGCCTACATCAACGGAGT---CG---------------------------A---C------------AACAACGA----------ATGCTCCAA--CGGAGACTACAACCAC--TAC-AACC---ACCACAACC------------------ACCACAA---CAACCAC---------------TACCAC--TGC--
droBip1 scf7180000395973:557313-557557 + CAACAACCACGACAACGACAAC---A---ACCACTCCCA---------AGCCAACAACCA---CCA---CGACTAC---AACAAC------TACTCCCAAACCAACAACAA---CCACCAAGTCA---------ACAACAA------------------CCACGACA----------------------------------ACAACAACCACGAC------GAC---------------CACAACAAC----GAC---------------------------------AAC---AACTC--------------------------C---CAAGC------CA---------------------------------------------------ACAACCACCAAGTCAACAACAACCACTC------------------CAAG------------GC---------------------------------------CAAC--TAA-ATCT---AC------CAAGCCTACAAAATCCACTCGCAAGCCAACCAAATC---------------TACCAGGC--CT-
droKik1 scf7180000302544:1367698-1367957 - CTACAGTGACCACAACTACTGCAAAG---TCCACAACGACGACTTCTAAGCCACCAACAA---C---------GAC---TGCTAA------AACATCTACAGTGACCACAA---CTACTGCAAAGCCGACAACGACGACTC---------------CTAAG------CCA-------------------------------TCAACAACGAC----------------------------------------TCCT---------------------------------AAAACATC--T------ACAATAACAACAACC---ACTCCAAAAC------AA---------------------------------------------------AC---AACGA------CA------ACTC------CA---------C---CACCAACTACAACTAC------------------------CAAAAATCCGACCACAGT---------TAC---------T---------------------------ACCTCGACCCAAAAACCAACAAGCACGACTC--CT-
droFic1 scf7180000454050:777525-777769 + CTACAGCAGCAACTACTGTGGCAACA---ACTACTGCGG---------CAACCACTACAG---CTGCAAC---TAC---TGCTGC------AGCAACTACAACAGCAGCAA---CAACAACTGCA---------GCAACAA------------CCACTGCAGCAACT-----------------------AC--------AACAGCAGCTACAACAACAGC-------------------------------------------------------------------------AGC--T------ACAA---------------C---AACAGCAGCAACTACAACAG------C------------GGCAAC------------------------AACTACTG------C------GG---------------CAA---C------------AAC------------------------AA---CTGCTGCAACAAC--TAC-AGCT---GC------AAC------------------AACAACAGCGGCAAC---------------TACTACCG--CT-
droEle1 scf7180000490458:6316-6550 + CTACAAAGAAACCTACAACAACCACA---AGAAGAGCAA---------CAACATCGACGA---AAAGAGC---AAC---GACAAC------GACATCTACGACAACAACAA---CAACCAGAAG------GACAACAACAC---CA---ACTACTACTACA----------------------------------------ACCACTACAAC----------------------------------------AACACCAAGG---------------------------CC--------CAC------AACAACAACAA------C---AAAGG------TA------G------CA---ACCACAAGAAGGA------------------------------------CAACAACCAC------------------CAA---------------AAA------------------------------GC---------CGA---CAACAAC---------AAC---------------ACGGAAAA---CATCAAC---------------AACAAC--TAC--
droRho1 scf7180000780062:225947-226187 - CAACACCAACCACTACCACCACAACA---ACAACACCAA---------AGCCAACAACAA---CTACAAC---AAC---TACAAC------AACAACACCAAAGCC---AA---CCACAACTACA---------ACGACAT------------CAACAACAACTACA-----------------------ACTGCA--------ACACCAAAACC------AAC----------------------------------------------------TACAAGTACAACAAC---AACAC--------CAAAG------------CC------A------ACT------A------C------------AACTAC------------------------AACAACA------------ACAC------------------CAAA------------GCC------------------------AA---CTACAACTTCAACTA---CAACAAC---------AAC---------------ACAAAAGC---CAACAAC---------------TACTAC--AAC--
droBia1 scf7180000302261:2567986-2568240 - CTGAAAAGCCAACCACCACAACAACAACCACAACAACTA---------AGAAG---ACTA---CCACAAC---AACAACAACAAC------AACGACAACAACAAC---AA---CCACAACTAAA---------AAGCCAA------------CCACTACAAACACA----------------------------------------ACTGA----------------------------------------AAAG---CCAACCACCACAAC---------------AAC---AACTA--------------------------A---AAAGA---------------------TA---ACCACAACAACAA------------------------------------CCACAACCACTAAAAAGCCAACTAC---------------------CACAACTG----------AAAAGCCAA--CAAC---------AAC---------CAC---------AACC------------ACTAAAAAGCCAACCACCAC---------------AACCACAA--CTG
droTak1 scf7180000415667:620450-620679 + CAACCGAGAAGACAACTACTGTAAAG---ACTACCACAG---------AGCCAACAACCG---AGAAGAC---AAC---TACTGT------AAAGATTACCACAGAACCAA---CAACTGA---A---------AAGACAA------------CTACTGTA----------------------------------------AAGACTACAGC----------------------------------------AGAA---CCAAC------------AACTGAGAAAACATC---AACTC--------------------------------------------------------AAAAGACAAC---AACTATTAAAACAACTACGGAGCCAACAAC---------------------CG------A---------GA---A------GACAACTA---------------------------------------------------------------CTGT------------------AAAGACTACCACAGA---------------ACCAACAA--CT-
droEug1 scf7180000409209:248407-248651 + CTACCACAACAACTGAGGCGACAACG---ACAACAACTG---------AGGCACCAACTA---CGACAAC---AAC---TGAGGC------GACAACGACAACAACAAAGTGCGCCCCAACTACC---------ACAACAA---------------CTGAG------GCG-------------------------------ACTACGACAACAAC-------------------------------------TGAG---GCCCCAACTACGAC---------------A-----------------ACAACT------------GA---GGCA---------------A------T------------AACGAC------------------------GACAACAA---C---------CG------AGGCCCCCACTAC---------------CAC------------------------------------AACCAC--TGA-AGCT---AC------AACGACAACAAA---------GTGCGCCCCAATTAC---------------CACAACAA--CT-
dm3 chr2L:9900314-9900567 - CTACTTTAAAGCCTACCGAAGAACCA---ACTACTCGCA---------AAACGTCAACCA---CAAAGAC---TAC---TAGAGA------GCCAACTACAAAGAGGGAAA---CAACTGAAAGG---------ACAACTCAGGAGCCAA---GCACCAGTAAG-------------------------------------ACAACAACCCA----------------------------------------TGAG---ACAACAGCAGAACCAGCAACC-----------------------------A---------------A---AAAGACAACGCATGAACCCACAACTCAGAAATCAAC---AACTTTAAGGATTACTGAAGAACCAACTA---------------------------------------------------------------------------------------------------------------------------CTCG------------------GAAATCATCAACCGC---------------AAAGACTA--CT-
droSim2 3r:325150-325372 + CGACACCAACTACAACTACAACAACG---CCAACTACAA---------CGACATCAACTA---CGACAAC---ACC---AACTAC------AACAACTACAACTAC------------------A---------ACAACAC------------CAACAACAACAACT---------ACA-----------A---CAAC--ACCAACACCAACTAC------------AACAACGACAACTACAACAACGACA---------------------------------------------------------------------------------------GCT------A------C------------AACAAC------------------------ACCAACTACAACAAC------GC------CA------ACTA------------------------------------------------------------------CAACAACACC---AACTAC------------------AACGACACCAACTAC---------------AACAAC--ACC--
droSec2 scaffold_6:466743-466974 + CTACAACAACAACAACAACTACTACA---ACAACACCAA---------CCACAACGACAC---C---AACTACACC---TACAAC---AACGCCAACTACAACGAC------------ACCAAC------TACGACAACAC------------C---A---ACT---ACA--------------------AC--------AACAACAACTACAACAACACCAACTACAACAACACCAACTACAACAACGACA---------------------------------------------------------------------------------------ACT------A------C------------AACAA------------------------------------CACC------AA---------------CTA---C------------AAC------------------------AA---CAACTA------------CAACAACGCC---AACTACA---------------ACGACA---CCAACTAC---------------AACAAC--ACC--
droYak3 3R:14100516-14100751 + CTACAACTACAACTACAACTACAACT---ACAACTACAA---------CTACAACTACAA---CTA---C---AAC---TACAACTACAACTACAACTACAACTAC------------AACTAC------AACTACAACTA------------------CAACTACA-----------------------AC--------TACAACTACAACTACAACTACAAC----------------------------TAC---------------------------AACTAC------AAC--T------ACAACT------------AC------AA------CT------A------C------------AACTAC------------------------AACTA------CAAC------TA---------------CAA---C------------TAC------------------------AA---CTACAACTACAAC--TAC-AACT---A------CAAC------------------TACAACTACAACTAC---------------AACTACAA--CT-
droEre2 scaffold_4929:15078838-15079088 + CTACAACAACCTGTACACAAGAAATT---ACAACTACAACAA------CCTGTACAACTA---C---AACTACAAC---TACAAC------GACTACTACAACAACCACAA---CTACTACTACA---------ACTACAA------------CAACTACAACTACT-----------------------AC--------TACAACTACAAC----------------------------------------AACC---------------------------------TGTACAAC--T------ACAACTACAACAACCTGTAC------AACTACAACT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------AA---CTACAACAACCTG--TAC-AACT---AC------AAC------------------TACG---ACTACTAC---------AACAACCTGTACAA--CT-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTACAGTGAAGACTACAACAGTAAAG---ACAACTCCCA---------AGCCGACAACTA---CGAAAAC---AAC---TACAGT------GAAGACTACAACAGTAAAGA---CAACTCCTAA------GCCGACAACTC---------------CGAAAACAACT-----------------------AC---AGT--GCAGACTACAACAAT-------------------------------------AGAG---ACAACTCCGAAAACAACAACC-----------------------------G---------------A---AAAAACAACGCC---------------------------G---A------------------------------------CGAC------------------------------------------AACATCTGGGCGCCCCAC---------AG---ATTCGACAACGTT--ACG-A------CC---AACCAC------------------GAGACCATCAACTTC---------------TACTACTC--CT-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............TACAACAGTAAAG---ACAACTCCCA---------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040400000000
.................................................................................................TACAACAGTAAAGA---CAACTCCTAA------GCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020200000000
.................................................................................................TACAACAGTAAAGA---CAACTCCTAA------GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
.............TACAACAGTAAAG---ACAACTCCCA---------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.............................ACAACTCCCA---------AGCCGACAACTA---CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..............................................................................................................A---CAACTCCTAA------GCCGACAACTC---------------CGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..............................................................................................................A---CAACTCCTAA------GCCGACAACTC---------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
............CTACAACAGTAAAG---ACAACTCCCA---------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..............................................................................................................A---CAACTCCTAA------GCCGACAACTC---------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.............TACAACAGTAAAG---ACAACTCCCA---------AGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..................................................................................................ACAACAGTAAAGA---CAACTCCTAA------GC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................ACAACAGTAAAGA---CAACTCCTAA------GCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...................................CCCA---------AGCCGACAACTA---CGAAAAC---AAC---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................................................................................................ACAACTC---------------CGAAAACAACT-----------------------AC---AGT--G................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000100
......................AAAG---ACAACTCCCA---------AGCCGACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010100000000
..................................................................................................ACAACAGTAAAGA---CAACTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000100000
...................................................................AAC---AAC---TACAGT------GAAGACTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010100000000
.....................TAAAG---ACAACTCCCA---------AGCCGACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000010
.................................................................................................TACAACAGTAAAGA---CAACTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
.............TACAACAGTAAAG---ACAACTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
..............ACAACAGTAAAG---ACAACTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000100000
droPer2
CCACAACTACGACAACAACAACGACG---ACAACCACCA---------CTACTACAACCA---CCACTAC---GAC---AACCAC------CACTACTACAACCAC------------AACAAC------AACGACAACTA---------CAACTACTTGC------TCG-------------------------------ACAACAACAAC----------------------------------------CACGACGACAACCAC-----------------------------------------TACTACAACAA------C---CACTA------CT------A------CA---ACCACCACGACAA------------------------------------CAACAACCAC------------------TAC---------------AAC------------------------------TA------CAACCA---CGACAACGAC---AACCAC------------------GACAACAACCACTAC---------------TACAACGA--CT-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
CAACAACTACAACAACAACAACAAAC---ACAACAACAA---------CAGCAACAACAACAAC---AACAACAAC---AACAAC------AACAACAACAACAACAACAA---CTACTACAGCA---------ACAACAA------------------CAACTACA----------------------------------ACAACAACTACAAC-------------------------------------AGCAACAACA---------------------------AC--------AACAACAACTACT------A------C---AACAA------CA------A------CA---ACTACAACAACAA------------------------------------------------------CAACAACCACAAC---------------AAC------------------------AA---------------CAA---CAACAACAAC------AACTACAACAAC---------AACAACAACAACAAC---------------AACTACTA--CT-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................CAACAACAA---CTACTACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00200020
................................................................................................CAACAACAACAACAA---CTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.15303000
..............................................................................................................................................................................................................AACTACAAC-------------------------------------AGCAACAACA---------------------------AC--------..............................................................................................................................................................................................................................................................................................21170.06100010
....................................................................................................................................................................................................................................................................CA---------------------------AC--------AACAACAACTACT------A------C---AA..............................................................................................................................................................................................................................................................21200.05100100
.....................................................................................................................CTACAGCA---------ACAACAA------------------CAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
...............................AACAACAA---------CAGCAACAACAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...................................................................AACAACAAC---AACAAC------AACAACAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....................................................................................................................................................................CA----------------------------------ACAACAACTACAAC-------------------------------------AGCA.........................................................................................................................................................................................................................................................................................................................................20200.05101000
droVir3
CCACAACAACTACAACCACGACAAAA---ACCACAACGA---------CGACAACAACGA---CAA---C---AAC---TACAAC------------------GACATCAA---CCACCACTACG---------AAAACAA------------CGACTACAGCTACA---------ACG-----------A---CTTG--TAGCACAACGACAAC-------------------------------------------------------------------------------AAC--C------ACAA---------C---TAC------GACAACAACTACAACGA------C------------AACAAC------------------------TACAACGACAACAAC------CA------CA------ACTAC---------------GAC------------------------------------AACAAC--CAC-AACT------------------------------ACGAAAC---CAACGAC---------------TACAAC--TAC--SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC---------------GAC------------------------------------AACAAC--CAC-A..............................................................................1630.331000000000000000000000000000000000000000000000000000000001000000
.................................CAACGA---------CGACAACAACGA---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.222000000000000000002000000000000000000000000000000000000000000000
..................................AACGA---------CGACAACAACGA---CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.171000000000000000000000000000000000000000000000000000000000001000
droMoj3
CCACGACAACGACAACAACCACGACA---ACAAC---CA---------CGACAACAACCA---CGACAAC---AAC---CACGAC------AACAACCACGACAACAACAA---CCACTACAAC------AACAACAACAC---------------CTTGTACGACA-----------------------AC--------GACAACGACAAC----------------------------------------GACAACGACA---------------------------AC--------GAC------AACGACAACAA------C---CACGA------CA------A------CA---ACCACGACAACGA------------------------------------CAACAACCAC------------------GAC---------------AACAACAT----------CAACACCTT--GTAC------------------GACAA---------CAACC---------------ACGACA---ACGACAAC---------------AACCAC--GAC--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAC------------------GACAA---------CAACC---------------ACGACA---ACGACAAC---------------.............2812.002200000
...............................................................................................................................................................GTACGACA-----------------------AC--------GACAACGACAAC----------------------------------------GA...........................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------AACAACAT----------CAACACCTT--GTAC------------------...............................................................................2211.001100000
...............................................................................................................................................................GTACGACA-----------------------AC--------GACAACGACAAC----------------------------------------GAC..........................................................................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................................ACCACGACAACAACAA---CCACTACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CCAC------------------GAC---------------AACAACAT----------CAACACCTT--GTAC------------------...............................................................................2811.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAC------------------GACAA---------CAACC---------------ACGAC........................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC---------------AACAACAT----------CAACACCTT--GTAC------------------G..............................................................................2511.001100000
...........................................................................................AACAACCACGACAACAACAA---CCACTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTT--GTAC------------------GACAA---------CAACC---------------A............................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC---------------AACAACAT----------CAACACCTT--GTAC------------------...............................................................................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC---------------AACAACAT----------CAACACCTT--.....................................................................................................2011.001100000
.........................................................................................................................................ACAC---------------CTTGTACGACA-----------------------AC--------GACAACG..........................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC---------------AACAACAT----------CAACACCTT--GTAC------------------GA.............................................................................2611.001100000
...........................................................................................................................C------AACAACAACAC---------------CTTGTACGACA-----------------------AC--------.................................................................................................................................................................................................................................................................................................................................................................................................2520.501100000
............................................................................................................CAA---CCACTACAAC------AACAACAACAC---------------CTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501100000
..................................................................................................................................AACAACAACAC---------------CTTGTACGACA-----------------------AC--------GACAA............................................................................................................................................................................................................................................................................................................................................................................................2920.501100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------GACAA---------CAACC---------------ACGACA---ACGACAAC---------------.............2530.331100000
....................................................................................................................................................................................................................................................................................................................................................CA------A------CA---ACCACGACAACGA------------------------------------CAACAAC.........................................................................................................................................................................2530.331100000
.........................................................CCA---CGACAAC---AAC---CACGAC------AACAACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331100000
...........................................................................................................................................................................................................................................................................................................................................CGA------CA------A------CA---ACCACGACAACGA------------------------------------CAAC............................................................................................................................................................................2530.331100000
.................................C---CA---------CGACAACAACCA---CGACAAC---AAC---CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331100000
..................CCACGACA---ACAAC---CA---------CGACAACAACCA---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331100000
....................................................................................................................................................................................................................................................................................................................................................................A---ACCACGACAACGA------------------------------------CAACA...........................................................................................................................................................................1930.331100000
............................................................................................................................................................................................................................................................................................................................................GA------CA------A------CA---ACCACGACAACGA------------------------------------CAAC............................................................................................................................................................................2430.331100000
......................................................................................................CAACAACAA---CCACTACAAC------AACAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAA---------CAACC---------------ACGACA---ACGACAAC---------------.............2430.331100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---------CAACC---------------ACGACA---ACGACAAC---------------AAC..........2530.331100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACC---------------ACGACA---ACGACAAC---------------A............1930.331100000
.......................................................................................................................................................................................................................................................................................................................GACAACAA------C---CACGA------CA------A------CA---ACCACGA..........................................................................................................................................................................................................................2670.292200000
......................GACA---ACAAC---CA---------CGACAACAACCA---CGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.292200000
..........GACAACAACCACGACA---ACAAC---CA---------CGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.292200000
................................................................GACAAC---AAC---CACGAC------AACAACCACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.292200000
.................................................GACAACAACCA---CGACAAC---AAC---CACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.292200000
............................................................................................................................................................................................................................................................................................................................CAA------C---CACGA------CA------A------CA---ACCACGA..........................................................................................................................................................................................................................2180.252200000
.........................................................................................................................................................................................................................................................................................................................................CACGA------CA------A------CA---ACCACGACAAC......................................................................................................................................................................................................................2180.252200000
..........................................................CA---CGACAAC---AAC---CACGAC------AAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.252200000
..............................CAAC---CA---------CGACAACAACCA---CGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.252200000
...............CAACCACGACA---ACAAC---CA---------CGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.252200000
.....................................................................C---AAC---CACGAC------AACAACCACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.252200000
.....................................CA---------CGACAACAACCA---CGACAAC---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.252200000
...................CACGACA---ACAAC---CA---------CGACAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.252200000
...............................................................................CACGAC------AACAACCACGACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.252200000
......................................................CAACCA---CGACAAC---AAC---CACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.252200000
...........................................................................................................................................................................................................................................................................................................................................................................ACGACAACGA------------------------------------CAACAACCAC------------------GAC---------------..................................................................................................................................2350.201100000
.................................................................................................................................................................................................................................................................................................AC--------GAC------AACGACAACAA------C---CACGA------C....................................................................................................................................................................................................................................................2350.201100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACA---ACGACAAC---------------AACCAC--GA...2050.201000100
....GACAACGACAACAACCACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201000100
..ACGACAACGACAACAACCACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201100000
.................................................................................................................................................................................................................................................................................................AC--------GAC------AACGACAACAA------C---CACG............................................................................................................................................................................................................................................................2150.201100000
.............................................................................................................................................................................................................................................................................................................................................................................GACAACGA------------------------------------CAACAACCAC------------------GAC---------------AA................................................................................................................................2350.201100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACA---ACGACAAC---------------AACCAC--G....2150.201100000
...........................................................................................................................................................................................................................................................................................................GAC------AACGACAACAA------C---CACGA------.....................................................................................................................................................................................................................................................2050.201000100
..ACGACAACGACAACAACCACGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACA---ACGACAAC---------------AACCAC--GAC--2350.201100000
.............................................................................................................................................................................................................................................................................................................................................................................GACAACGA------------------------------------CAACAACCAC------------------GA..................................................................................................................................................2050.201000100
...........................................................................................................................................................................................................................................................................................................GAC------AACGACAACAA------C---CACGA------CA------A------......................................................................................................................................................................................................................................2350.201100000
...........................................................................................................................................................................................................................................................................................................................................................................ACGACAACGA------------------------------------CAACAACCAC------------------G...................................................................................................................................................2150.201100000
....GACAACGACAACAACCACGACA---A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201100000
.............................................................................................................................................................................................................................................................................................................C------AACGACAACAA------C---CACGA------CA------A------CA---.................................................................................................................................................................................................................................2360.171100000
......CAACGACAACAACCACGACA---ACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.171100000
...............................................................................................................................................................................................................................................................................................................................................................................CAACGA------------------------------------CAACAACCAC------------------GAC---------------AACA..............................................................................................................................2360.171100000
....................................................................................................................................................................................................................................................................................................................AACGACAACAA------C---CACGA------CA------A------CA---.................................................................................................................................................................................................................................2260.171100000
................................................................................................................................................................................................................................................................................................................................................................................AACGA------------------------------------CAACAACCAC------------------GAC---------------AACA..............................................................................................................................2260.171100000
.......AACGACAACAACCACGACA---ACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.171100000
.......AACGACAACAACCACGACA---AC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141100000
......................GACA---ACAAC---CA---------CGACAACAACCA---CGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.141100000
.......................................................................................................................................................................................................................................................................................................................GACAACAA------C---CACGA------CA------A------CA---ACCACGACAA.......................................................................................................................................................................................................................2970.141100000
.................ACCACGACA---ACAAC---CA---------CGACAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141100000
................................................................................................................................................................................................................................................................................................................................................................................AACGA------------------------------------CAACAACCAC------------------GAC---------------AAC...............................................................................................................................2170.141100000
................................................................GACAAC---AAC---CACGAC------AACAACCACGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.141100000
................................................................GACAAC---AAC---CACGAC------AACAACCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141100000
.................................................GACAACAACCA---CGACAAC---AAC---CACGAC------AA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2970.141100000
......CAACGACAACAACCACGACA---A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141100000
................................AC---CA---------CGACAACAACCA---CGACAAC---A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141100000
......................GACA---ACAAC---CA---------CGACAACAACCA---C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141100000
..........GACAACAACCACGACA---ACAAC---CA---------CGACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2970.141100000
..........................................................................AC---CACGAC------AACAACCACGACAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141100000
......................GACA---ACAAC---CA---------CGACAACAACCA---CGACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2970.141100000
..........GACAACAACCACGACA---ACAAC---CA---------CGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.141100000
........................................................ACCA---CGACAAC---AAC---CACGAC------AACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141100000
.............................................................................................................................................................................................................................................................................................................C------AACGACAACAA------C---CACGA------CA------A------......................................................................................................................................................................................................................................2170.141100000
..........GACAACAACCACGACA---ACAAC---CA---------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141100000
...............................................................................................................................................................................................................................................................................................................................................................................CAACGA------------------------------------CAACAACCAC------------------GAC---------------AA................................................................................................................................2170.141100000
................................................................GACAAC---AAC---CACGAC------AACAACCACGACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2970.141100000
.......................................................................................................................................................................................................................................................................................................................GACAACAA------C---CACGA------CA------A------CA---ACCAC............................................................................................................................................................................................................................2470.141100000
.................................................GACAACAACCA---CGACAAC---AAC---CAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141100000
.......................................................................................................................................................................................................................................................................................................................GACAACAA------C---CACGA------CA------A------CA---ACCACGAC.........................................................................................................................................................................................................................2770.141100000
.................................................GACAACAACCA---CGACAAC---AAC---CACGAC------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.141100000
....................................................................................................................................................................................................................................................................................................................AACGACAACAA------C---CACGA------CA------A------C.....................................................................................................................................................................................................................................2170.141100000
.............AACAACCACGACA---ACAAC---CA---------CGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.131100000
........................CA---ACAAC---CA---------CGACAACAACCA---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
...............................................................................................................................................................................................................................................................................................................................................................................CAACGA------------------------------------CAACAACCAC------------------GAC---------------..................................................................................................................................1980.131100000
...................................................................AAC---AAC---CACGAC------AACAACCACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.131100000
.........................................................................................................................................................................................................................................................................................................................CAACAA------C---CACGA------CA------A------CA---ACCA.............................................................................................................................................................................................................................2180.131100000
.............................................................................................................................................................................................................................................................................................................................AA------C---CACGA------CA------A------CA---ACCACGA..........................................................................................................................................................................................................................2080.131100000
.......................................................AACCA---CGACAAC---AAC---CACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131100000
.............................................................................................................................................................................................................................................................................................................C------AACGACAACAA------C---CACGA------C....................................................................................................................................................................................................................................................1980.131100000
............CAACAACCACGACA---ACAAC---CA---------CGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131100000
...................................................CAACAACCA---CGACAAC---AAC---CACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131100000
.........................................................................AAC---CACGAC------AACAACCACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131100000
...................................................CAACAACCA---CGACAAC---AAC---CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
....................................................AACAACCA---CGACAAC---AAC---CACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.131100000
.............................................................................................................................................................................................................................................................................................................................AA------C---CACGA------CA------A------CA---ACCACGAC.........................................................................................................................................................................................................................2180.131100000
................AACCACGACA---ACAAC---CA---------CGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131100000
................AACCACGACA---ACAAC---CA---------CGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ACGACAAC---------------AACCAC--GAC--1980.131100000
......CAACGACAACAACCACGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.131100000
.........................................................................................................................................................................................................................................................................................................................CAACAA------C---CACGA------CA------A------CA---ACCACGA..........................................................................................................................................................................................................................2480.131100000
........................CA---ACAAC---CA---------CGACAACAACCA---CGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131100000
..........................................................................................................................................................................................................................................................................................................................AACAA------C---CACGA------CA------A------CA---ACCACGA..........................................................................................................................................................................................................................2380.131100000
.......................................................AACCA---CGACAAC---AAC---CACGAC------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
............CAACAACCACGACA---ACAAC---CA---------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
.........................A---ACAAC---CA---------CGACAACAACCA---CGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.131100000
...............................AAC---CA---------CGACAACAACCA---CGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
.........................................................................AAC---CACGAC------AACAACCACGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
...............................AAC---CA---------CGACAACAACCA---CGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131100000
..................................................................CAAC---AAC---CACGAC------AACAACCACGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131100000
..................................................................CAAC---AAC---CACGAC------AACAACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
..................................................................................................................................................................CGACA-----------------------AC--------GACAACGACAAC----------------------------------------.............................................................................................................................................................................................................................................................................................................................................19200.051100000
...............................................................................................................................................................................................................................................................AACGACA---------------------------AC--------GAC------AACGACAAC............................................................................................................................................................................................................................................................................21200.051100000
.................................................................................................................................................................................................................AAC----------------------------------------GACAACGACA---------------------------AC--------GAC------AAC..................................................................................................................................................................................................................................................................................21200.051100000
...........................................................................................................................................................................................................AACGACAAC----------------------------------------GACAACGACA---------------------------AC--------..............................................................................................................................................................................................................................................................................................21200.051100000
droGri2
CAACAACAACAACGACAACAACGACA---ACAACAACAA---------CGACGACAACCA---CAACGAC---AAC---CACAAC------GACGACCACAACAACGACAA---CTACTACCTGC---------ACAACAC------------C---A---ACA---ACAACAACGACAACTACTACCTG--CACA--ACACC------------------------AACAACGACAACAACAACAACGACA---------------------------------------------------------------------------------------ACA------A------C---------AACAACGA------------------------------------C---------GA---------------CAA---C------------CAC------------------------AA---CGA------CAACCA---CAACGACGAC------AACA---------------ACGACA---ACAACAAC---------------GACAACTA--CT-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................................................................................................................................................................................CA------A------C---------AACAACGA------------------------------------C---------GA---------------CAA---C------------C.................................................................................................................................2060.17110
..............................CAACAACAA---------CGACGACAACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.17110
............................................................................................................................................................................................................................................................................................................................................................A------C---------AACAACGA------------------------------------C---------GA---------------CAA---C------------CA................................................................................................................................1990.11110
................................ACAACAA---------CGACGACAACCA---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.11110
...........................................................A---CAACGAC---AAC---CACAAC------GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.07110
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------AA---CGA------CAACCA---CAACGA..........................................................................19140.07110
.............................ACAACAACAA---------CGACGACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05110
...................................................................................................................................................................................................................................................................................................................................................ACA------A------C---------AACAACGA------------------------------------C---------GA---------------CAA---...............................................................................................................................................19200.05110
droAna3
CTACAACCCAGTCTACTTCAGAGTCT---ACAACAACGG---------AGTCTACAACAA---CGGAGTC---TAC---AACAAC------AGAGTCTACAACAACTGCAG---CTGCCACACA------------GTCTA------------------CAACAACG---------GAG-----------TCTACA--ACAACGGAATCTTC----------------------------------------------------------------AACAACGGAGTCTAC---AACAA--------------------------------------------------------CGGAGTCTAC---TACAACAGCAGCTGCTACACAGCCTACATCAACGGAGT---CG---------------------------A---C------------AACAACGA----------ATGCTCCAA--CGGAGACTACAACCAC--TAC-AACC---ACCACAACC------------------ACCACAA---CAACCAC---------------TACCAC--TGC--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACAACCAC--TAC-AACC---ACCACAAC................................................................2712.002020000
.................................................GTCTACAACAA---CGGAGTC---TAC---AACAAC------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002100001
....................................................................................................................................................................................................................................................................................................................................................................................................................GT---CG---------------------------A---C------------AACAACGA----------ATGCTCCAA--CGGA.................................................................................................2712.002110000
.............................................................................................................................................................................................................................................................................................................................................................................................GCTACACAGCCTACATCAACGGA.....................................................................................................................................................................................2312.002200000
....................................................................................................................................................................................................................................................................................................................................................................................................AGCCTACATCAACGGAGT---CG---------------------------A---...............................................................................................................................................2112.002101000
.............................................................................................................................................................................................................................................................................................................................................................................................GCTACACAGCCTACATCAACGGAGT---C...............................................................................................................................................................................2612.002200000
..........................................................AA---CGGAGTC---TAC---AACAAC------AGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000020
......................................................................................................................................................................................................ACAACGGAATCTTC----------------------------------------------------------------AACAAC...............................................................................................................................................................................................................................................................................................................2012.002020000
............................................................................................GAGTCTACAACAACTGCAG---C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
...............................................................................................................................................................................................CTACA--ACAACGGAATCTTC----------------------------------------------------------------AACAACGG.............................................................................................................................................................................................................................................................................................................2712.002200000
...............CTTCAGAGTCT---ACAACAACGG---------AGTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
......................................................................................................................................................................................................................................................................................................................................................................AGTCTAC---TACAACAGCAGC.............................................................................................................................................................................................................1911.001010000
................................................................................................CTACAACAACTGCAG---CTGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---ACCACAACC------------------ACCACAA---CAACCAC---------------T............2611.001100000
.....................................................ACAACAA---CGGAGTC---TAC---AACAAC------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.........................................................................................................................................................................................................................................................................................................................................................................CTAC---TACAACAGCAGCTGCTACACAGC..................................................................................................................................................................................................2711.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................CTGCTACACAGCCTACATCAACGGAGT---C...............................................................................................................................................................................2811.001100000
...............................................................................................................................................................................................................................................................................................CTAC---AACAA--------------------------------------------------------CGGAGTCTAC---T........................................................................................................................................................................................................................2011.001000010
...............CTTCAGAGTCT---ACAACAACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................CTACATCAACGGAGT---CG---------------------------A---C------------AAC...............................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA--CGGAGACTACAACCAC--TAC-...............................................................................2211.001010000
................................................................................................................................................................................................................CTTC----------------------------------------------------------------AACAACGGAGTCTAC---AA.................................................................................................................................................................................................................................................................................................2111.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACGA----------ATGCTCCAA--CGGAGA...............................................................................................2311.001000010
.................................................................................................................................................................................AG-----------TCTACA--ACAACGGAATCTTC----------------------------------------------------------------AA...................................................................................................................................................................................................................................................................................................................2411.001100000
.......................................................................................................AACTGCAG---CTGCCACACA------------GT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........................................................................................AGAGTCTACAACAACTGCAG---CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................CAACGGAATCTTC----------------------------------------------------------------AACAACGGAGT..........................................................................................................................................................................................................................................................................................................2411.001000001
...................AGAGTCT---ACAACAACGG---------AGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
............................................................................................................................................................................................................................................................................................................................................................................................TGCTACACAGCCTACATCAACGGAGT---CG---------------------------A---...............................................................................................................................................2911.001100000
........................................................ACAA---CGGAGTC---TAC---AACAAC------AGAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGA----------ATGCTCCAA--CGGAGACTACAACCA......................................................................................2811.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................GCTACACAGCCTACATCAACGGAGT---................................................................................................................................................................................2511.001100000
................................................................................................................................................................................................TACA--ACAACGGAATCTTC----------------------------------------------------------------AACAACG..............................................................................................................................................................................................................................................................................................................2511.001000010
................................................................................................................................................................................................TACA--ACAACGGAATCTTC----------------------------------------------------------------AACAACGGA............................................................................................................................................................................................................................................................................................................2711.001000010
................................................................................................................................................................................................................CTTC----------------------------------------------------------------AACAACGGAGTCTAC---AACAA--------------------------------------------------------CG....................................................................................................................................................................................................................................2611.001001000
.........................................................................................................................................................................................................................................................................................................................................................................CTAC---TACAACAGCAGCTGC..........................................................................................................................................................................................................1911.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGACTACAACCAC--TAC-A..............................................................................1911.001100000
............CTACTTCAGAGTCT---ACAACAACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
....................................................................................................................GCCACACA------------GTCTA------------------CAACAACG---------.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................AG-----------TCTACA--ACAACGGAATCTT......................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...............................................................................................................................................................................................CTACA--ACAACGGAATCTTC----------------------------------------------------------------AACAACG..............................................................................................................................................................................................................................................................................................................2611.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCAC--TAC-AACC---ACCACAACC------------------ACC..........................................2611.001010000
...................................................................................................................................................................................................A--ACAACGGAATCTTC----------------------------------------------------------------AACAACGGAGT..........................................................................................................................................................................................................................................................................................................2611.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................ATCAACGGAGT---CG---------------------------A---C------------AACAACGA----------AT..............................................................................................................2511.001100000
............CTACTTCAGAGTCT---ACAACAACGG---------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................GTCTACAACAACTGCAG---CTGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................................................................................................................................................................................................................................................................................................C---AACAA--------------------------------------------------------CGGAGTCTAC---TACAAC...................................................................................................................................................................................................................2211.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCAC--TAC-AACC---ACCACAACC------------------ACCACA.......................................2911.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................GT---CG---------------------------A---C------------AACAACGA----------ATGCTCCAA--CGG..................................................................................................2611.001100000
..............................................................................................GTCTACAACAACTGCAG---CTGCCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTCCAA--CGGAGACTACAACCAC--TAC-...............................................................................2811.001010000
..............................................................................................GTCTACAACAACTGCAG---CTGCCACACA------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCTGCTACACAGCCTACATC...........................................................................................................................................................................................2911.001100000
...................................................................................................................................................................................................A--ACAACGGAATCTTC----------------------------------------------------------------AACAACGGA............................................................................................................................................................................................................................................................................................................2411.001000010
.................................................................................................................................................................................................ACA--ACAACGGAATCTTC----------------------------------------------------------------AACAACGG.............................................................................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................ACGGAATCTTC----------------------------------------------------------------AACAACGGAGTCT........................................................................................................................................................................................................................................................................................................2411.001000010
......................................................................................................CAACTGCAG---CTGCCACACA------------GTCTA------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................................................................................................................................................................................................................................................................CAA--------------------------------------------------------CGGAGTCTAC---TACAACAGCAG..............................................................................................................................................................................................................2411.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACAACCAC--TAC-AACC---ACCAC...................................................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................GTCTAC---TACAACAGCAGCTGCTACACA....................................................................................................................................................................................................2711.001100000
.........................................................................................................................................................................................................ACGGAATCTTC----------------------------------------------------------------AACAACGGAGTCTAC---A..................................................................................................................................................................................................................................................................................................2711.001100000
...............................................................................................................................................................................................CTACA--ACAACGGAATCTTC----------------------------------------------------------------AACA.................................................................................................................................................................................................................................................................................................................2311.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................CAACGGAGT---CG---------------------------A---C------------AACAACGA----------AT..............................................................................................................2311.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------A---C------------AACAACGA----------ATGCTCCAA--CGGA.................................................................................................2411.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACAACCAC--TAC-AACC---ACCACA..................................................................2511.001010000
........................................................................................................................................GTCTA------------------CAACAACG---------GAG-----------TCT........................................................................................................................................................................................................................................................................................................................................................................................................1940.502200000
......................GTCT---ACAACAACGG---------AGTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.502200000
........................................................................................................................................................................................................................................................................................ACGGAGTCTAC---AACAA--------------------------------------------------------CGGAGT................................................................................................................................................................................................................................2220.501100000
.............................................................................................................................................................................................................................................................................................GTCTAC---AACAA--------------------------------------------------------CGGAGTCT..............................................................................................................................................................................................................................1940.502200000
.................................................GTCTACAACAA---CGGAGTC---T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.502200000
..............................CAACAACGG---------AGTCTACAACAA---CGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501010000
..........................................................................................................................................CTA------------------CAACAACG---------GAG-----------TCTACA--ACAACGG............................................................................................................................................................................................................................................................................................................................................................................................2720.501000010
........................CT---ACAACAACGG---------AGTCTACAACAA---CGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501000010
...................................................................................................................................................................................................................C----------------------------------------------------------------AACAACGGAGTCTAC---AACAA--------------------------------------------------------CGGAGT................................................................................................................................................................................................................................2720.501010000
...................................ACGG---------AGTCTACAACAA---CGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501100000
.............................ACAACAACGG---------AGTCTACAACAA---C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331100000
...........................................................................................................................................................................................................................................................................................GAGTCTAC---AACAA--------------------------------------------------------CGGAG.................................................................................................................................................................................................................................1830.331000001
...................................................CTACAACAA---CGGAGTC---TAC---AAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331010000
.....................................................ACAACAA---CGGAGTC---TAC---AACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331010000
...............................................................................................................................................................CAACAACG---------GAG-----------TCTACA--ACAACGGA...........................................................................................................................................................................................................................................................................................................................................................................................2530.331010000
..........................................................................................................................................CTA------------------CAACAACG---------GAG-----------TCTACA--AC.................................................................................................................................................................................................................................................................................................................................................................................................2230.331010000
.................................CAACGG---------AGTCTACAACAA---CGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331010000
............................................................................................................................................A------------------CAACAACG---------GAG-----------TCTACA--ACAAC..............................................................................................................................................................................................................................................................................................................................................................................................2330.331100000
...................................................CTACAACAA---CGGAGTC---TAC---AACAAC------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331100000
.....................................................ACAACAA---CGGAGTC---TAC---AACAAC------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331100000
........................CT---ACAACAACGG---------AGTCTACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331010000
............................................................................................................................................A------------------CAACAACG---------GAG-----------TCTACA--ACAA...............................................................................................................................................................................................................................................................................................................................................................................................2230.331010000
..........................................................................................................................................CTA------------------CAACAACG---------GAG-----------TCTACA--ACAAC..............................................................................................................................................................................................................................................................................................................................................................................................2530.331100000
...............................AACAACGG---------AGTCTACAACAA---CGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331010000
......................................................................................................................................................................................................................................................................................CAACGGAGTCTAC---AACAA--------------------------------------------------------CG....................................................................................................................................................................................................................................2030.331000010
..................................................................................................................................................................CAACG---------GAG-----------TCTACA--ACAACGG............................................................................................................................................................................................................................................................................................................................................................................................2130.331010000
........................CT---ACAACAACGG---------AGTCTACAACAA---C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331100000
....................................................................................................................................................................................................................................................................................AACAACGGAGTCTAC---AACAA--------------------------------------------------------CGG...................................................................................................................................................................................................................................2330.331010000
..............................CAACAACGG---------AGTCTACAACAA---CGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331010000
.................................CAACGG---------AGTCTACAACAA---CG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331000010
......................................................................................................................................................................................................................................................................................CAACGGAGTCTAC---AACAA--------------------------------------------------------CGG...................................................................................................................................................................................................................................2130.331010000
...................................................................................................................................................................................................................C----------------------------------------------------------------AACAACGGAGTCTAC---AACAA--------------------------------------------------------CGGA..................................................................................................................................................................................................................................2530.331010000
................................................................................................................................................................AACAACG---------GAG-----------TCTACA--ACAACGG............................................................................................................................................................................................................................................................................................................................................................................................2330.331010000
.............................ACAACAACGG---------AGTCTACAACAA---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331010000
......................................G---------AGTCTACAACAA---CGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000001
..................................................................................................................................................................CAACG---------GAG-----------TCTACA--ACAACG.............................................................................................................................................................................................................................................................................................................................................................................................2030.331000010
....................GAGTCT---ACAACAACGG---------AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000001
...........................................................................................................................A------------GTCTA------------------CAACAACG---------GAG-----------T..........................................................................................................................................................................................................................................................................................................................................................................................................1840.251100000
.................................................GTCTACAACAA---CGGAGTC---C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251010000
.............................................................................................................................................................................................................................................................................................GTCTAC---AACAA--------------------------------------------------------CGGAGTCC..............................................................................................................................................................................................................................1940.251010000
........................................................................................................................................GTCTA------------------CAACAACG---------GAG-----------TCC........................................................................................................................................................................................................................................................................................................................................................................................................1940.251010000
............................................................................................................................................................................................................................................................................................AGTCTAC---AACAA--------------------------------------------------------CGGAGT................................................................................................................................................................................................................................1840.251100000
.....................AGTCT---ACAACAACGG---------AGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.251100000
................................................AGTCTACAACAA---CGGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.251100000
......................GTCT---ACAACAACGG---------AGTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.251010000
droBip1
CAACAACCACGACAACGACAAC---A---ACCACTCCCA---------AGCCAACAACCA---CCA---CGACTAC---AACAAC------TACTCCCAAACCAACAACAA---CCACCAAGTCA---------ACAACAA------------------CCACGACA----------------------------------ACAACAACCACGAC------GAC---------------CACAACAAC----GAC---------------------------------AAC---AACTC--------------------------C---CAAGC------CA---------------------------------------------------ACAACCACCAAGTCAACAACAACCACTC------------------CAAG------------GC---------------------------------------CAAC--TAA-ATCT---AC------CAAGCCTACAAAATCCACTCGCAAGCCAACCAAATC---------------TACCAGGC--CT-SizeHit CountTotal NormTotal
No Reads
droKik1
CTACAGTGACCACAACTACTGCAAAG---TCCACAACGACGACTTCTAAGCCACCAACAA---C---------GAC---TGCTAA------AACATCTACAGTGACCACAA---CTACTGCAAAGCCGACAACGACGACTC---------------CTAAG------CCA-------------------------------TCAACAACGAC----------------------------------------TCCT---------------------------------AAAACATC--T------ACAATAACAACAACC---ACTCCAAAAC------AA---------------------------------------------------AC---AACGA------CA------ACTC------CA---------C---CACCAACTACAACTAC------------------------CAAAAATCCGACCACAGT---------TAC---------T---------------------------ACCTCGACCCAAAAACCAACAAGCACGACTC--CT-SizeHit CountTotal NormTotal
No Reads
droFic1
CTACAGCAGCAACTACTGTGGCAACA---ACTACTGCGG---------CAACCACTACAG---CTGCAAC---TAC---TGCTGC------AGCAACTACAACAGCAGCAA---CAACAACTGCA---------GCAACAA------------CCACTGCAGCAACT-----------------------AC--------AACAGCAGCTACAACAACAGC-------------------------------------------------------------------------AGC--T------ACAA---------------C---AACAGCAGCAACTACAACAG------C------------GGCAAC------------------------AACTACTG------C------GG---------------CAA---C------------AAC------------------------AA---CTGCTGCAACAAC--TAC-AGCT---GC------AAC------------------AACAACAGCGGCAAC---------------TACTACCG--CT-SizeHit CountTotal NormTotal
No Reads
droEle1
CTACAAAGAAACCTACAACAACCACA---AGAAGAGCAA---------CAACATCGACGA---AAAGAGC---AAC---GACAAC------GACATCTACGACAACAACAA---CAACCAGAAG------GACAACAACAC---CA---ACTACTACTACA----------------------------------------ACCACTACAAC----------------------------------------AACACCAAGG---------------------------CC--------CAC------AACAACAACAA------C---AAAGG------TA------G------CA---ACCACAAGAAGGA------------------------------------CAACAACCAC------------------CAA---------------AAA------------------------------GC---------CGA---CAACAAC---------AAC---------------ACGGAAAA---CATCAAC---------------AACAAC--TAC--SizeHit CountTotal NormTotal
No Reads
droRho1
CAACACCAACCACTACCACCACAACA---ACAACACCAA---------AGCCAACAACAA---CTACAAC---AAC---TACAAC------AACAACACCAAAGCC---AA---CCACAACTACA---------ACGACAT------------CAACAACAACTACA-----------------------ACTGCA--------ACACCAAAACC------AAC----------------------------------------------------TACAAGTACAACAAC---AACAC--------CAAAG------------CC------A------ACT------A------C------------AACTAC------------------------AACAACA------------ACAC------------------CAAA------------GCC------------------------AA---CTACAACTTCAACTA---CAACAAC---------AAC---------------ACAAAAGC---CAACAAC---------------TACTAC--AAC--SizeHit CountTotal NormTotal
No Reads
droBia1
CTGAAAAGCCAACCACCACAACAACAACCACAACAACTA---------AGAAG---ACTA---CCACAAC---AACAACAACAAC------AACGACAACAACAAC---AA---CCACAACTAAA---------AAGCCAA------------CCACTACAAACACA----------------------------------------ACTGA----------------------------------------AAAG---CCAACCACCACAAC---------------AAC---AACTA--------------------------A---AAAGA---------------------TA---ACCACAACAACAA------------------------------------CCACAACCACTAAAAAGCCAACTAC---------------------CACAACTG----------AAAAGCCAA--CAAC---------AAC---------CAC---------AACC------------ACTAAAAAGCCAACCACCAC---------------AACCACAA--CTGSizeHit CountTotal NormTotal
No Reads
droTak1
CAACCGAGAAGACAACTACTGTAAAG---ACTACCACAG---------AGCCAACAACCG---AGAAGAC---AAC---TACTGT------AAAGATTACCACAGAACCAA---CAACTGA---A---------AAGACAA------------CTACTGTA----------------------------------------AAGACTACAGC----------------------------------------AGAA---CCAAC------------AACTGAGAAAACATC---AACTC--------------------------------------------------------AAAAGACAAC---AACTATTAAAACAACTACGGAGCCAACAAC---------------------CG------A---------GA---A------GACAACTA---------------------------------------------------------------CTGT------------------AAAGACTACCACAGA---------------ACCAACAA--CT-SizeHit CountTotal NormTotal
No Reads
droEug1
CTACCACAACAACTGAGGCGACAACG---ACAACAACTG---------AGGCACCAACTA---CGACAAC---AAC---TGAGGC------GACAACGACAACAACAAAGTGCGCCCCAACTACC---------ACAACAA---------------CTGAG------GCG-------------------------------ACTACGACAACAAC-------------------------------------TGAG---GCCCCAACTACGAC---------------A-----------------ACAACT------------GA---GGCA---------------A------T------------AACGAC------------------------GACAACAA---C---------CG------AGGCCCCCACTAC---------------CAC------------------------------------AACCAC--TGA-AGCT---AC------AACGACAACAAA---------GTGCGCCCCAATTAC---------------CACAACAA--CT-SizeHit CountTotal NormTotal
No Reads
dm3
CTACTTTAAAGCCTACCGAAGAACCA---ACTACTCGCA---------AAACGTCAACCA---CAAAGAC---TAC---TAGAGA------GCCAACTACAAAGAGGGAAA---CAACTGAAAGG---------ACAACTCAGGAGCCAA---GCACCAGTAAG-------------------------------------ACAACAACCCA----------------------------------------TGAG---ACAACAGCAGAACCAGCAACC-----------------------------A---------------A---AAAGACAACGCATGAACCCACAACTCAGAAATCAAC---AACTTTAAGGATTACTGAAGAACCAACTA---------------------------------------------------------------------------------------------------------------------------CTCG------------------GAAATCATCAACCGC---------------AAAGACTA--CT-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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........................................................ACCA---CAAAGAC---TAC---TAGAGA------GCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.0810000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TACTTTAAAGCCTACCGAAGAACCA---AC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TACTTTAAAGCCTACCGAAGAACCA---ACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................AAGAC---TAC---TAGAGA------GCCAACTACAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AGCCTACCGAAGAACCA---AC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................AAAGAC---TAC---TAGAGA------GCCAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGACACCAACTACAACTACAACAACG---CCAACTACAA---------CGACATCAACTA---CGACAAC---ACC---AACTAC------AACAACTACAACTAC------------------A---------ACAACAC------------CAACAACAACAACT---------ACA-----------A---CAAC--ACCAACACCAACTAC------------AACAACGACAACTACAACAACGACA---------------------------------------------------------------------------------------GCT------A------C------------AACAAC------------------------ACCAACTACAACAAC------GC------CA------ACTA------------------------------------------------------------------CAACAACACC---AACTAC------------------AACGACACCAACTAC---------------AACAAC--ACC--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC---AACTAC------------------AACGACACCAACTAC---------------AA...........2520.50100010000000000000
droSec2
CTACAACAACAACAACAACTACTACA---ACAACACCAA---------CCACAACGACAC---C---AACTACACC---TACAAC---AACGCCAACTACAACGAC------------ACCAAC------TACGACAACAC------------C---A---ACT---ACA--------------------AC--------AACAACAACTACAACAACACCAACTACAACAACACCAACTACAACAACGACA---------------------------------------------------------------------------------------ACT------A------C------------AACAA------------------------------------CACC------AA---------------CTA---C------------AAC------------------------AA---CAACTA------------CAACAACGCC---AACTACA---------------ACGACA---CCAACTAC---------------AACAAC--ACC--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CTACAACTACAACTACAACTACAACT---ACAACTACAA---------CTACAACTACAA---CTA---C---AAC---TACAACTACAACTACAACTACAACTAC------------AACTAC------AACTACAACTA------------------CAACTACA-----------------------AC--------TACAACTACAACTACAACTACAAC----------------------------TAC---------------------------AACTAC------AAC--T------ACAACT------------AC------AA------CT------A------C------------AACTAC------------------------AACTA------CAAC------TA---------------CAA---C------------TAC------------------------AA---CTACAACTACAAC--TAC-AACT---A------CAAC------------------TACAACTACAACTAC---------------AACTACAA--CT-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................CTACAAC----------------------------TAC---------------------------AACTAC------AAC--T------A......................................................................................................................................................................................................................................................................................21200.05101000000000
......................................A---------CTACAACTACAA---CTA---C---AAC---T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
.......................ACT---ACAACTACAA---------CTACAACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
..................................................................................................................................................................................................................................................................................................................................................................................CTAC------------------------AACTA------CAAC------TA---------------CAA---C------------TA................................................................................................................................21200.05101000000000
...............................................................................................................................................................................................................................C----------------------------TAC---------------------------AACTAC------AAC--T------ACAACT------------A....................................................................................................................................................................................................................................................................21200.05101000000000
.....................................................ACTACAA---CTA---C---AAC---TACAACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
.....ACTACAACTACAACTACAACT---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
....................................................................................................................................CTACAACTA------------------CAACTACA-----------------------AC--------TA...............................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
................................................................................................CTACAACTAC------------AACTAC------AACTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
...........ACTACAACTACAACT---ACAACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
...............................................................................................................................................................................................C--------TACAACTACAACTACAACTA.............................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
..........................................................................................CTACAACTACAACTAC------------AACTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................CT------A------C------------AACTAC------------------------AACTA------CAAC------TA---------------.....................................................................................................................................................21200.05101000000000
................................ACTACAA---------CTACAACTACAA---CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
....................................................................................CTACAACTACAACTACAACTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
...................................................................................................................................................................................................................CTACAACTACAAC----------------------------TAC---------------------------AACTA..........................................................................................................................................................................................................................................................................................................21200.05101000000000
............................................................................................................................................................................................................................................................................................CTAC------AAC--T------ACAACT------------AC------AA------CT------A------......................................................................................................................................................................................................................................21200.05101000000000
........................................................................................................................CTAC------AACTACAACTA------------------CAACTA....................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
......................................................................................................................................................................................................................................................................................................................CT------------AC------AA------CT------A------C------------AACTAC------------------------AACTA------................................................................................................................................................................................21200.05101000000000
..........................................................................................................................................CTA------------------CAACTACA-----------------------AC--------TACAACTA.........................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
......................................................................................................CTAC------------AACTAC------AACTACAACTA------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
........................................................................................................................................................................................................................................................................................................C--T------ACAACT------------AC------AA------CT------A------C------------AACTA....................................................................................................................................................................................................................21200.05101000000000
.............................................................................................................................................................................................................CTACAACTACAACTACAAC----------------------------TA...........................................................................................................................................................................................................................................................................................................................................21200.05101000000000
..................................................................................................................................................................CTACA-----------------------AC--------TACAACTACAACTA...................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................CTA------CAAC------TA---------------CAA---C------------TAC------------------------AA---CTA...............................................................................................21200.05101000000000
...........................................................................C---TACAACTACAACTACAACTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
.................ACTACAACT---ACAACTACAA---------CT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
droEre2
CTACAACAACCTGTACACAAGAAATT---ACAACTACAACAA------CCTGTACAACTA---C---AACTACAAC---TACAAC------GACTACTACAACAACCACAA---CTACTACTACA---------ACTACAA------------CAACTACAACTACT-----------------------AC--------TACAACTACAAC----------------------------------------AACC---------------------------------TGTACAAC--T------ACAACTACAACAACCTGTAC------AACTACAACT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------AA---CTACAACAACCTG--TAC-AACT---AC------AAC------------------TACG---ACTACTAC---------AACAACCTGTACAA--CT-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................ACAACTA---C---AACTACAAC---TACAAC------GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
.......................................................................................................AACCACAA---CTACTACTACA---------ACC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.....................................................................CTACAAC---TACAAC------GACTACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
..........................................................................................................CACAA---CTACTACTACA---------ACTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.......................................................................................................AACCACAA---CTACTACTACA---------AC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
........................................................................................................................CTACA---------ACTACAA------------CAACTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................1921.0020200000
.............................................................................................CTACTACAACAACCACAA---CTACTACTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
...................................................GTACAACTA---C---AACTACAAC---TACAAC------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010100000
.....................................................................................................................................................................................................................................................................................................CAAC--T------ACAACTACAACAACCTGTAC------AAC..........................................................................................................................................................................................................................................................2820.5010100000
..........................................................................................................................................................AACTACAACTACT-----------------------AC--------TACAACTACAAC----------------------------------------.............................................................................................................................................................................................................................................................................................................................................2720.5010100000
..........................................................................................................................................CAA------------CAACTACAACTACT-----------------------AC--------TAC..............................................................................................................................................................................................................................................................................................................................................................................................2220.5010100000
..........................................................................................................................................CAA------------CAACTACAACTACT-----------------------AC--------TACAAC...........................................................................................................................................................................................................................................................................................................................................................................................2520.5010100000
......................AATT---ACAACTACAACAA------CCTGTACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010100000
.......................................................................................................................ACTACA---------ACTACAA------------CAACTACAACTACC-----------------------...........................................................................................................................................................................................................................................................................................................................................................................................................2720.5010100000
........................................................................................................................CTACA---------ACTACAA------------CAACTACAACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG---ACTACTAC---------AACAACCTGTAC.......2330.3310100000
..............ACACAAGAAATT---ACAACTACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---AC------AAC------------------TACG---ACTACTAC---------AACAACCT...........2630.3310100000
...............................................................................................................................................................................................C--------TACAACTACAAC----------------------------------------AACC---------------------------------TGTACAAC--..............................................................................................................................................................................................................................................................................................2540.2510100000
........................................................................................................................................................................................................................................................................................................C--T------ACAACTACAACAACCTGTAC------AAC..........................................................................................................................................................................................................................................................2540.2510100000
...CAACAACCTGTACACAAGAAATT---ACAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.2510100000
....................................................................................................................................................................................................................................................................................................ACAAC--T------ACAACTACAACAACC........................................................................................................................................................................................................................................................................2150.2010100000
....................................................................................................................................................................................................................................................................................................ACAAC--T------ACAACTACAACAACCTGT.....................................................................................................................................................................................................................................................................2450.2010100000
......................................................................................................................................................................................................................................................................................................AAC--T------ACAACTACAACAACCTGTA....................................................................................................................................................................................................................................................................2350.2010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACTAC------------AAC------------------------AA---CTACAAC...........................................................................................21100.2020200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAC------------AAC------------------------AA---CTACAACAACCTG--TAC-...............................................................................25100.2020200000
.....................................................................................................................................................................................................................................................................................................CAAC--T------ACAACTACAACAACCC.......................................................................................................................................................................................................................................................................2150.2010100000
.....................................................................................................................................................................................................................................................................................................CAAC--T------ACAACTACAACAACCTGTAC------.............................................................................................................................................................................................................................................................2550.2010100000
....................................................................................................................................................................................................................................................................................................................................................CT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------AA---CTAC..............................................................................................28100.2020200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TAC-AACT---AC------AAC------------------TACG---ACTACTAC---------AAC................28110.1820200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---AC------AAC------------------TACG---ACTACTAC---------AACAAC.............25130.1520200000
....................................................................................................................................................................................................................................................................................................................................................CT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------AA---C.................................................................................................25130.1520200000
.......................................................................................................................................................................................................................................................................................................AC--T------ACAACTACAACAACCT.......................................................................................................................................................................................................................................................................1970.1410100000
...........................................................................................................................................................................................................................................................................................................................ACAACCTGTAC------AACTACAACT------------------------------A------------------------------------------------------CAAC..........................................................................................................................................................2670.1410100000
..............................................................................................................................................................................................AC--------TACAACTACAAC----------------------------------------AACC---------------------------------T.......................................................................................................................................................................................................................................................................................................1970.1410100000
.......................................................................................................................................................................................................................................................................................................AC--T------ACAACTACAACAACCTGTA....................................................................................................................................................................................................................................................................2270.1410100000
..................................................................................................................................................................................................................AC----------------------------------------AACC---------------------------------TGTACAAC--T------ACAACTACAAC............................................................................................................................................................................................................................................................................2670.1410100000
........................................................................................................................................................................................................................................................................................................C--T------ACAACTACAACAACCTGT.....................................................................................................................................................................................................................................................................2070.1410001000
..............................................................................................................................................................................................AC--------TACAACTACAAC----------------------------------------AACC---------------------------------TGTA....................................................................................................................................................................................................................................................................................................2270.1410100000
...............................................................................................................................................................................................C--------TACAACTACAAC----------------------------------------AACC---------------------------------TGT.....................................................................................................................................................................................................................................................................................................2070.1410001000
......................................ACAA------CCTGTACAACTA---C---AACTACAAC---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410100000
..........................................................................................................................................................................................................CAACTACAAC----------------------------------------AACC---------------------------------TGTACAAC--..............................................................................................................................................................................................................................................................................................22160.1320200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTAC------------AAC------------------------AA---CTACAACAACCTG--TA.................................................................................2780.1310100000
..............................CAACTACAACAA------CCTGTACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.1320200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACTACTAC------------AAC------------------------AA---CTACAACAACCT......................................................................................2880.1310100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGACTACTAC------------AAC------------------------AA---CTACAACAACC.......................................................................................2980.1310100000
...................................................................................................................................................................................................................................................................................................................CAACTACAACAACCTGTAC------AAC..........................................................................................................................................................................................................................................................22160.1320200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------AA---CTACAACAACCTG--TAC-AAC............................................................................22160.1320200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAC------------AAC------------------------AA---CTACAACAACCTG--TAC-...............................................................................2780.1310100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTAC------------AAC------------------------AA---CTACAACAACCTG--TAC-...............................................................................2880.1310100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTAC------------AAC------------------------AA---CTACAACAACC.......................................................................................2280.1311000000
.........................T---ACAACTACAACAA------CCTGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.1111000000
..........................................................................................................................................................................................................................................................................................................................AACAACCTGTAC------AACTACAACT------------------------------A------------------------------------------------------C.............................................................................................................................................................24180.1120200000
...........................................................................................................................................................................................................................................................................................................T------ACAACTACAACAACCTGTA....................................................................................................................................................................................................................................................................2090.1111000000
.....................................AACAA------CCTGTACAACTA---C---AACTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24180.1120200000
........................................................................................................................................................................................................TACAACTACAAC----------------------------------------AACC---------------------------------TGTA....................................................................................................................................................................................................................................................................................................2090.1111000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACCTG--TAC-AACT---AC------AAC------------------TAC........................................24180.1120200000
.................................................................................................................................................................................................................AAC----------------------------------------AACC---------------------------------TGTACAAC--T------ACAACTAC...............................................................................................................................................................................................................................................................................24180.1120200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------AAC------------------------AA---CTACAACAACCTG--TAC-AACT---........................................................................27100.1010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAC------------AAC------------------------AA---CTACAACAACCTG--TAC-AA.............................................................................27100.1010100000
....................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------AA---CT................................................................................................24100.1010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------AA---CTACAACAACCTG--TAC-...............................................................................21100.1010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAC------------AAC------------------------AA---CTACAACAACCTG--TA.................................................................................25100.1010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAC------------AAC------------------------AA---CTACAACAACCTG--T..................................................................................23100.1010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------AA---CTACAACAACCTG--T..................................................................................19100.1010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAC------------AAC------------------------AA---CTACAACAACCTG--TAC-AAC............................................................................29100.1010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAC------------AAC------------------------AA---CTACAACAACCTG--TAC-AAC............................................................................28100.1010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------AAC------------------------AA---CTACAACAACCTG--TA.................................................................................22100.1010100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------AAC------------------------AA---CTACAACAACCTG--TAC-AACT---AC------................................................................29100.1010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGACTACTAC------------AAC------------------------AA---CTACAAC...........................................................................................25100.1010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------------AA---CTACAACAACCTG--TAC-AAC............................................................................24100.1010100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAACCTG--TAC-AACT---AC------AAC------------------TACG---....................................28110.0911000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTG--TAC-AACT---AC------AAC------------------TACG---ACTAC...............................27110.0910100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC------------AAC------------------------AA---CTACAACAACC.......................................................................................19110.0910100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCTG--TAC-AACT---AC------AAC------------------TACG---ACT.................................26110.0910001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTG--TAC-AACT---AC------AAC------------------TACG---AC..................................24110.0910100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG--TAC-AACT---AC------AAC------------------TACG---AC..................................20110.0910100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TAC-AACT---AC------AAC------------------TACG---ACTACT..............................23110.0910100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--TAC-AACT---AC------AAC------------------TACG---ACTAA...............................22110.0910100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCTG--TAC-AACT---AC------AAC------------------TACG---A...................................25110.0910100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACCTG--TAC-AACT---AC------AAC------------------TACG---AC..................................28110.0910100000
...............................................................................................................................................................................................................................................................................................................................................TACAACT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------.......................................................................................................27120.0810100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC-AACT---AC------AAC------------------TACG---ACTACTAC---------AAC................27120.0810100000
................................................................................................................................................................................................................................................................................................................................................ACAACT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------.......................................................................................................26130.0810100000
.....................................................ACAACTA---C---AACTACAAC---TACAAC------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23130.0810100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACT---AC------AAC------------------TACG---ACTACTAC---------AAC................23130.0810100000
................................................................................................................................................................................................................................................................................................................................................ACAACT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------AA---C.................................................................................................29130.0810100000
...................................................................................................................................................................................................................................................................................................................................................ACT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------.......................................................................................................23130.0810100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AACT---AC------AAC------------------TACG---ACTACTAC---------AACA...............26130.0810100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---AC------AAC------------------TACG---ACTACTAC---------AA.................21130.0810100000
................................................................................................................................................................................................................................................................................................................................................ACAACT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------A......................................................................................................27130.0810100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AACT---AC------AAC------------------TACG---ACTACTAC---------AACA...............27130.0810100000
....................................................................................................................................................................................................................................................................................................................................................CT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AA................................................................................................................................21130.0810100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AACT---AC------AAC------------------TACG---ACTACTAC---------AACAAC.............29130.0810100000
.................................................................................................................................................................................................................................................................................................................................................CAACT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------AAC------------------------A......................................................................................................26130.0810100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AACT---AC------AAC------------------TACG---ACTACTAC---------AAC................26130.0810100000
..................................................................................................................................................................................................................................................................................................................................................AACT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------..................................................................................................................................21140.0710100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AACT---AC------AAC------------------TACG---ACTAC...............................20140.0710100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-AACT---AC------AAC------------------TACG---ACTACTA.............................21140.0710100000
................................................................................................................................................................................................................................................................................................................................................ACAACT------------------------------A------------------------------------------------------CAACTACGACTAC.................................................................................................................................................20140.0710100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AACT---AC------AAC------------------TACG---ACTACTAC---------...................23140.0710100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-AACT---AC------AAC------------------TACG---ACTA................................19140.0710100000
.................................................................................................................................................................................................................................................................................................................................................CAACT------------------------------A------------------------------------------------------CAACTACGACTACTA...............................................................................................................................................21140.0710100000
................................................................................................................................................................................................................................................................................................................................................ACAACT------------------------------A------------------------------------------------------CAACTACGACTA..................................................................................................................................................19140.0710100000
................................................................................................................................................................................................................................................................................................................................................ACAACT------------------------------A------------------------------------------------------CAACTACGACTACTAC------------..................................................................................................................................23140.0710100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACT---AC------AAC------------------TACG---ACTACT..............................19140.0710100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACT---AC------AAC------------------TACG---ACTACTAC---------...................21140.0710100000
..................................................................................................................................................................................................................................................................................................................................................AACT------------------------------A------------------------------------------------------CAACTACGACTACT................................................................................................................................................19140.0710100000
.........................................................................................................................................................................................................ACAACTACAAC----------------------------------------AACC---------------------------------TGTACAAC--..............................................................................................................................................................................................................................................................................................23160.0610100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------AA---CTACAACAACCTG--TAC-AAC............................................................................23160.0610100000
..................................................................................................................................................................................................................................................................................................................ACAACTACAACAACCTGTAC------AAC..........................................................................................................................................................................................................................................................23160.0610100000
.............................ACAACTACAACAA------CCTGTACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23160.0610100000
..............................................................................................................................................................................................................TACAAC----------------------------------------AACC---------------------------------TGTACAAC--T------ACAACTA................................................................................................................................................................................................................................................................................26180.0610100000
..................................TACAACAA------CCTGTACAACTA---C---AACTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26180.0610100000
....................................CAACAA------CCTGTACAACTA---C---AACTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25180.0610100000
......................................................................................................................................................................................................................................................................................................................CTACAACAACCTGTAC------AACTACAACT------------------------------A------------------------------------------------------C.............................................................................................................................................................28180.0610100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACCTG--TAC-AACT---AC------AAC------------------TAC........................................25180.0610100000
..................................TACAACAA------CCTGTACAACTA---C---AACTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27180.0610100000
.................................CTACAACAA------CCTGTACAACTA---C---AACTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28180.0610100000
..............................................................................................................................................................................................................TACAAC----------------------------------------AACC---------------------------------TGTACAAC--T------ACAACTAC...............................................................................................................................................................................................................................................................................27180.0610100000
.......................................................................................................................................................................................................................................................................................................................TACAACAACCTGTAC------AACTACAACT------------------------------A------------------------------------------------------C.............................................................................................................................................................27180.0610100000
.............................................................................................................................................................................................................CTACAAC----------------------------------------AACC---------------------------------TGTACAAC--T------ACAACTAC...............................................................................................................................................................................................................................................................................28180.0610100000
................................................................................................................................................................................................................CAAC----------------------------------------AACC---------------------------------TGTACAAC--T------ACAACTAC...............................................................................................................................................................................................................................................................................25180.0610100000
.......................................................................................................................................................................................................................................................................................................................TACAACAACCTGTAC------AACTACAACT------------------------------A------------------------------------------------------..............................................................................................................................................................26180.0610100000
.........................................................................................................................................................................................................................................................................................................................CAACAACCTGTAC------AACTACAACT------------------------------A------------------------------------------------------C.............................................................................................................................................................25180.0610100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAACAACCTG--TAC-AACT---AC------AAC------------------TAC........................................28180.0610100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAACCTG--TAC-AACT---AC------AAC------------------TA.........................................26180.0610100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAACCTG--TAC-AACT---AC------AAC------------------TAC........................................27180.0610100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACCTG--TAC-AACT---AC------AAC------------------...........................................23190.0510100000
................................ACTACAACAA------CCTGTACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.0510100000
.............................................................................................................................................................................................................CTACAAC----------------------------------------AACC---------------------------------TGTACAAC--T------A......................................................................................................................................................................................................................................................................................21190.0510100000
............................................................................................................................................................................................................ACTACAAC----------------------------------------AACC---------------------------------TGTACAAC--..............................................................................................................................................................................................................................................................................................20190.0510100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAC---------AACAACCTGTACAA--C..20190.0510100000
.............................................................................................................................................................................................................CTACAAC----------------------------------------AACC---------------------------------TGTACAAC--T------ACAAC..................................................................................................................................................................................................................................................................................25190.0510100000
.................................CTACAACAA------CCTGTACAACTA---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.0510100000
...................................ACAACAA------CCTGTACAACTA---C---AAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23190.0510100000
.................................CTACAACAA------CCTGTACAACTA---C---AAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25190.0510100000
...............................................................................................................................................................................................................ACAAC----------------------------------------AACC---------------------------------TGTACAAC--T------ACAAC..................................................................................................................................................................................................................................................................................23190.0510100000
......................................................................................................................................................................................................................................................................................................................CTACAACAACCTGTAC------AACTACAAC....................................................................................................................................................................................................................................................25190.0510100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAACAACCTG--TAC-AACT---AC------AAC------------------...........................................25190.0510100000
......................................................................................................................................................................................................................................................................................................................CTACAACAACCTGTAC------AACTA........................................................................................................................................................................................................................................................21190.0510100000
........................................................................................................................................................................................................................................................................................................................ACAACAACCTGTAC------AACTACAAC....................................................................................................................................................................................................................................................23190.0510100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CTACAACAACCTG--TAC-AAC............................................................................20190.0510100000
.....................................................................................................................................................................................................................................................................................................................ACTACAACAACCTGTAC------AAC..........................................................................................................................................................................................................................................................20190.0510100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACAACAACCTG--TAC-AACT---A.......................................................................21190.0510100000
.....................................................................................................................................................................................................................................................................................................................................C------AACTACAACT------------------------------A------------------------------------------------------CAACTAC.......................................................................................................................................................19200.0510100000
......................................................CAACTA---C---AACTACAAC---TAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000

Generated: 05/18/2015 at 06:33 AM