ID:

dps_3316

 Coordinate:

XR_group8:4595270-4595420 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.1 -22.6

Flybase annnotation

CDS [Dpse\GA11351-cds]; exon [dpse_GLEANR_7874:4]; intron [Dpse\GA11351-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGGAGCGGAGCGACGAGACGAGACGACAAGTGCAGGAAACGGGTTAACACACACCACAAAAGTAGAAGAAGAAGCTCTCTCGGACAAACAGCGGTCAGCGATCTTTTGGCCATAAGCAGCAGACAGCAGCATCTTCTGCAGTGCGTGCGCGTGTGCGTACGCGTGTGTGAATATAACTTACGATTCACTCGGTGATTCAAGGCCAGCGGTCACTCAGAGGAGGCGGAGCAGCATCAGAAGCTACTTAACTT
************************************************************************************************************************.....((((......))))..(((((((((....)))))))))((.((((((..........)))))).))..********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM343916
embryo
 V112
male body		 SRR902012
CNS imaginal disc
 SRR902010
ovaries
 GSM444067
head
 M022
male body		 M062
head
........................................................................................................................AGACAGCAGCATCTTCTGCAGTGCGT......................................................................................................... 26 0 1 7.00 7 1 1 4 1 0 0 0 0 0
.....................................................................................................................................................CGTGTGCGTACGCGTGTGTGA................................................................................. 21 0 1 5.00 5 2 0 1 2 0 0 0 0 0
..........................................................................................................................................................................ATATAACTTACGATTCACTCGGT.......................................................... 23 0 1 5.00 5 2 2 1 0 0 0 0 0 0
......................................................................GAAGCTCTCTCGGACAAACAGC............................................................................................................................................................... 22 0 1 3.00 3 1 0 0 0 2 0 0 0 0
.....................................................................................................................................................CGTGTGCGTACGCGTGTGTGAAT............................................................................... 23 0 1 3.00 3 2 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................GGTCACTCAGAGGAGGCGG......................... 19 0 1 3.00 3 3 0 0 0 0 0 0 0 0
...................................................................................................GATCTTTTGGCCATAAGCAGC................................................................................................................................... 21 0 1 3.00 3 0 2 1 0 0 0 0 0 0
...........GACGAGACGAGACGACAAGTGCAG........................................................................................................................................................................................................................ 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................GCGGAGCAGCATCAGAAG........... 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................CGTGTGCGTACGCGTGTGT................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CGGTCACTCAGAGGAGGCGGA........................ 21 0 1 2.00 2 1 0 0 0 0 1 0 0 0
......................................................................GAAGCTCTCTCGGACAAACAGCGGTC........................................................................................................................................................... 26 0 1 2.00 2 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................AATATAACTTACGATTCACTCGGT.......................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
................................................................................................AGCGATCTTTTGGCCATAAGCAGCAGAC............................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0 0 0 0 0
.........................................................................................................................GACAGCAGCATCTTCTGCAGTGCGT......................................................................................................... 25 0 1 2.00 2 0 1 1 0 0 0 0 0 0
......................................................................................................CTTTTGGCCATAAGCAGCAGACAG............................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 0 1 0 0
......................................................................................................................................................ATGTGCGTACGCGTGTGTGA................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................GTGTGCGTACGCGTGTGTGAATATAAC.......................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................GCAGCATCTTCTGCAGTGCGT......................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................AGCTCTCTCGGACAAACAGC............................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................ATAACTTACGATTCACTCGGTGAT....................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................CTTCTGCAGTGCGTGCGCG.................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ATATAACTTACGATTCACTCGGTG......................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................CTTACGATTCACTCGGTGATT...................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
................GACGAGACGACAAGTGCA......................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CGGTCACTCAGAGGAGGCGGAGCAGC................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................................................AAAAGTAGAAGAAGAAGCTCT............................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GGTCACTCAGAGGAGGCGGAGCA..................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................AGAAGAAGCTCTCTCGGAC...................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................GCAGGAAACGGGTTAACACA........................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 0 1
....................................................................................................................................CTTCTGCAGTGCGTGCGCGTTT................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................CCATAAAAGTAGAAGAAGAAGCTCTCT........................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................AAACAGCGGTCAGCGATCTTTTGGC............................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................AACGGGTTAACACACACCACAAAAGTA........................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................GGCGATCTTTTGGCCATAAGCAGCAGAC............................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................AGCAGCATCTTCTGCAGTGCGTGC....................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................TTTGGCCATAAGCAGCAGACAGCAG.......................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................CGGTCACTCAGAGGAGGCGGAGC...................... 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0
...................GAGACGACAAGTGCAGGA...................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................AGCATCTTCTGCAGTGCGT......................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................GAAGAAGCTCTCTCGGACA..................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................CTCGGACAAACAGCGGTCAGCGAT..................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................TGATTCAAGGCCAGCGGT......................................... 18 0 1 1.00 1 0 0 0 0 0 0 1 0 0
...................GGGACGACAAGTGCAGGAAACGGG................................................................................................................................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................GGACAAACAGCGGTCAGC........................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ATTCAAGGCCAGCGGTCACTC.................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................ATCCTCTGCAGTGCGTGCG...................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................CGACAAGTGCAGGAAACGGGT............................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................ATAAGCAGCAGACAGCAGC......................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TATAACTTACGATTCACTCGGTG......................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................CATAAACAGCAGACAGCAGCA........................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GATTCAAGGCCAGCGGTCACTCAGAG................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........GACGAGACGAGACGACAAGT............................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TAACTTACGATTCACTCGGC.......................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................GCGCGTGTGCGTACGCGTGTGTGAAT............................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................AACGGGTTAACACACACCACAAAAGT............................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................................GCATCTTCTGCAGTGCGTGC....................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................AAAGTAGAAGAAGAAGCTCTCTCGGACA..................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................CGAGACGACAAGTGCAGGAAACGGGT............................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........CGACGAGACGAGACGACAAGTGC.......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GCGGTCACTCAGAGGAGGCGTA........................ 22 1 1 1.00 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................TATAACTTACGATTCACTCGGTGATT...................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................................................................TAAGCAGCAGACAGCAGCATC...................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................GACGACAAGTGCAGGAAACGGGT............................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................CATCTTCTGCAGTGCGTGCGCGTGTGC............................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AGCGGTCACTCAGAGGAGGC........................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................CAGCGGTCACTCAGAGGAGGC........................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ATTCACTCGGTGATTCAAGGCCAG............................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................ATATAACTTACGATTCACTCGGTGATT...................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCAGAGGAGGCGGAGCAGCA.................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.GGAGCGGAGCGACGAGACGA...................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................GTGTGCGTACGCGTGTGTGAAT............................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................AGCATCTTCTGCAGTGCGTGCG...................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................CGACAAGTGCAGGAAACGGTTT.............................................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................GACGACAAGTGCAGGAAACG.................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................................................................AGCAGCATCTTCTGCAGTGCGTGCG...................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................TGTGCAGGAAACGGGTTAACAC......................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................CTGCAGTGCGTGCGCGTGTGC............................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................................AGCGATCTTTTGGCCATAAGC...................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
................................................................GAAGAAGAAGCTCTCTCGGAC...................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................CACAAAAGTAGAAGAAGAAGC................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................ATAACTTACGATTCACTCGGT.......................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................CGTGTGCGTACGCGTGTGTGAATATAA........................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................GAAGAAGCTCTCTCGGACAAACAGCG.............................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..GAGCGGAGCGACGAGACGAGA.................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................TGCAGTGCGTGCGCGTGTG................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............ACGAGACGAGACGACAAGTGC.......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................GGACAAACAGCGGTCAGCGAT..................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................GTAGGTGGAGCAGCATCAGAAGCTAC....... 26 2 1 1.00 1 0 1 0 0 0 0 0 0 0
..................CGAGACGACAAGTGCAGG....................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................ATCTTCTGCAGTGCGTGCG...................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................TAACTTACGATTCACTCGGT.......................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................GCGCGTGTGCGTACGCGTGTGTGAATA.............................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........GACGAGACGAGACGACAAGTGC.......................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................AAGAGCAGGAAAAGGGTTAACAC......................................................................................................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................ATAACTTACGATTCACTCGGTG......................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................TTCGGTCACTCAGAGGAGGCGGAGC...................... 25 2 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................GCGTGTGCGTACGCGTGTGTGAAT............................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................AGTGCGTGCGCGTGTGCGT............................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AGCGGTCACTCAGAGGAGGCGGA........................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................AAAAGTAGAAGAAGAAGC................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................CTTCTGCAGTGCGTGCGCGTT.................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................TAACACACACCACAAAAGTA........................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................ACAGCAGCATCTTCTGCAGTGCGT......................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................TACGCGTGTGTGAATATAACTTACG..................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................GAATAACTTACGATTCACTCGGT.......................................................... 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0
............................AGTGAAGGAGACGGGTTGAC........................................................................................................................................................................................................... 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0
.................................................................AAGCAGAGGCTATCTCGGA....................................................................................................................................................................... 19 3 12 0.08 1 1 0 0 0 0 0 0 0 0
................................................................................CGGACAATCAGCGGGCAGCC....................................................................................................................................................... 20 3 14 0.07 1 1 0 0 0 0 0 0 0 0
.............................GTGAAGGAGACGGGTTGAC........................................................................................................................................................................................................... 19 3 19 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

GCCTCGCCTCGCTGCTCTGCTCTGCTGTTCACGTCCTTTGCCCAATTGTGTGTGGTGTTTTCATCTTCTTCTTCGAGAGAGCCTGTTTGTCGCCAGTCGCTAGAAAACCGGTATTCGTCGTCTGTCGTCGTAGAAGACGTCACGCACGCGCACACGCATGCGCACACACTTATATTGAATGCTAAGTGAGCCACTAAGTTCCGGTCGCCAGTGAGTCTCCTCCGCCTCGTCGTAGTCTTCGATGAATTGAA
**********************************************************.....((((......))))..(((((((((....)))))))))((.((((((..........)))))).))..************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 M062
head
 GSM444067
head
 GSM343916
embryo
 V112
male body
............................................................................................CCAGTCGCTAGAAAACCGGT........................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0
.............................................................................................CAGTCGCTAGAAAACCGGT........................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0
..................................................................................CTGTTTGTCGCCAGTCGCTAG.................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0
..................................................................TCTTCTTCGAGAGAGCCTGT..................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................TTCCGGTCGCCAGTGAGTCT................................. 20 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................GCTAAGTGAGCCACTAAGTT................................................... 20 0 1 1.00 1 1 0 0 0 0 0
................CTGCTCTGCTGTTCACGTCCT...................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................CTAGAAAACCGGTATTCGTC.................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................AAGACGTCACGCACGCGCAC.................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
.........CGCTGCTCTGCTCTGCTGTT.............................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
........TCGCTGCTCTGCTCTGCTGT............................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..........................................................TTTCATCTTCTTCTTAGAGT............................................................................................................................................................................. 20 2 3 1.00 3 0 2 1 0 0 0
.....................................................................................................................................................................................................GTTCCGGTCGCCAGTGAGTC.................................. 20 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................ATTGAATGCTAAGTGAGCCA.......................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...................................................................CTTCTTCGAGAGAGCCTGTT.................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.......CTCGCTGCTCTGCTCTGCTG................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
..................GCTCTGCTGTTCACGTCCTT..................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..............................................TGTGTGTGGTGTTTTCATC.......................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................ATGCTAAGTGAGCCACTAAG..................................................... 20 0 1 1.00 1 1 0 0 0 0 0
............................................................................................................................................................................................................................TCCGCCTCGTCGTAGTCTT............ 19 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................TCTCCTCCGCCTCGTCGTAG................ 20 0 1 1.00 1 1 0 0 0 0 0
....................TCTGCTGTTCACGTCCTTTGC.................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................ACCGGTATTCGTCGTCTGTCG............................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
...........................TTCACGTCCTTTGCCCAATTG........................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
......................................................................................TTGTCGCCAGTCGCTAGAAAA................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................ACCGGTATTCGTCGTCTGT.............................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
.............................CACGTCCTTTGCCCAATTGTG......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................CTCCGCCTCGTCGTAGTC.............. 18 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................AGTGAGTCTCCTCCGCCTCGT..................... 21 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................TGAAGACGTCACGCACGCGCA................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
....................CCTGCTGTTCACGTCCTTTGCCC................................................................................................................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................CACACGCATGCGCACACACTT................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
......................AGCTGTTCACGTCCTTTGCCC................................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................CCTCGTCGTAGTCTTCGATG....... 20 0 2 0.50 1 1 0 0 0 0 0
.TTTCGCCTCGCTGCTCTGCT...................................................................................................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................TTTCGTCGTAGCAGACGTC.............................................................................................................. 19 2 6 0.17 1 0 0 0 1 0 0
..........................................................TTTCATCTTATTCTTAGAG.............................................................................................................................................................................. 19 2 10 0.10 1 1 0 0 0 0 0
.......................................................................................AGTCGCCAGTCGGGAGAAA................................................................................................................................................. 19 3 13 0.08 1 0 0 0 0 1 0
.............................................................................................................................CGTCGTAGAGGTCGTCAAGCA......................................................................................................... 21 3 20 0.05 1 0 0 0 0 0 1
...........................................................TTCATCTTCTTCTTAGAGT............................................................................................................................................................................. 19 2 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group8:4595220-4595470 - dps_3316 CGG-AGCGGAGCGACGAG-------------ACGAGACGACAAGTGCAGGAAACGGGTTAA----CACACACC-----------A---CAAAAGTAGAA--GAAGAAGCTC-----TCTCG------GA-----------C--A-----------------------AACAGCGGTCAGCGATCTTTTGGC---------------CATA-------AGCAG------C----------------------AGACAGCAGCATCTTCTG------------------CA--------------------------G-TGC------GTGCGCGTGTGC--GTAC---GCGTGTGTG-------------------AATATAACT-----------TACGATTCACTCGGTGATT-CAAGGCCAGC---------------------------------------------------------GGTCACTCAGAGGAGGCGGAGCAGCATCAGAAGCTACTTAACTT
droPer2 scaffold_29:835775-836025 - dpe_1325 CGG-AGCGGAGCGACGAG-------------ACGAGACGACAAGTGCAGGAAACGGGTTAA----CACACACC-----------A---CAAAAGTAGAA--GAAGAAGCTC-----TCTCG------GA-----------C--A-----------------------AACAGCGGTCAGCGATCTTTTGGC---------------CATA-------AGCAG------C----------------------AGACAGCAGCATCTTCTG------------------CA--------------------------G-TGC------GTGCGCGTGTGC--GTAC---GCGTGTGTG-------------------AACATAACT-----------TACGATTCACTCGGTGATT-CAAGGCCAGC---------------------------------------------------------GGTCACTCAGAGGAGGCGGAGCAGCATCAGAAGCTACTTAACTT
droWil2 scf2_1100000004511:8825150-8825435 + CGA-GGCGAGGC---AAGGCAAACCGCGAACAGCAAACGACAAGTGCAAGAAACTGGTTAG----CAC-----CAC--------A---CACAGA-----TTGAAGAAGCTCCGCACTATCC------GACGC-----------A-----------------------CAGAGCGGTCAGCGATCTTTGC-C---------------CATAAAT----ATCAT------C----------------------AGCCAGCAGCAGCCTCAG------------------CA--------------------------G-TCGGAACGACTAA-ATTGTGC--GTGT---T--------TTTTTTT--TGTTTTTAAA-------TACTAAAAAAAAACACAACAACTTGGAT--TTCCAAGGGTATT------------------------------G--GAGTTATTT-----AACGTTTTT-AGTGATTCAGAGAGGGGG--TCACCAGCAG-------------C
droVir3 scaffold_13049:8987110-8987415 - GCG------------AAG-------------ACGACACGACAAGTGCAAGAAACGAGTTA---------CGATAACAA--CA-CA---C--AAAGCACA--GAAGAAGCGT-----T--CAGATTTAGACGCAC-TTAAAAAGA-GAGACAGACAGAGAAAGAGAGAGAGAGAGGTCAGCGATCTTTAA-CCAGCTCCAAGCTCCTCCTA-------AACAG------C----------------------GT-CGGCATCACCATTAG------------------CA--------------------------G-CCC------ATGC-CTTGTGC--GTGTGTTA--------TTTTTT--A----------AACAAAACATTA--------AATAAAACATTCGAT--TT-CAAGGGTAGTGGCAGAAG------------------CAACGTGTGTA-----TATCAG-CAGC--TAGCCAAGTGATTC-------------------AGCTGCTCAGCGT
droMoj3 scaffold_6680:6357001-6357261 + C------------------------------ACGACGCGACAAGTGCACGAAACGAGTTA---------CGATAACAC--AA-CA---TAAAA------TTGAAGAAGCGC-------TCG------GT-----------C--AAGCAAGCGA--GAGAGAGAGAGAGAGAGAGGTCAGCGATCTTTAA-ACAGCTCCAAGCTC--CAT---------------------------------------------------CATCATTAGTAGCAACAAAATCAGCATCA--------------------------G-CGC------ATGT-CTGGTGC--GTGT---G--------TGTTTT--A----------AACAAAAC------------AATAATACATTCGGT--TT-CAAGGGTAGC-GCAGAAG------------------CGACGTGTGTG-----TATTAGCCAGG--TAGCCAAGTG--------------------------------ATTC
droGri2 scaffold_15110:4759398-4759646 - TG-----------------------------------CGACAAGTGCAAGAAACGAGTTA---------CGATAACAA--CAGCAAAAA--AAAGCACACTGAAGAAGCAC------CTCA------GA-----------C--A-GAGAGAGATAGAGAA--AGAGAGAGAGAGGTCAGCGATCTTTAG-CCAGC--------------------------------------------------------AGCT-----CATCATTTG------------------T-----------------TA--------G-CGC------GTGCATATGTATACATAT---GTATGTGTG---------TGCAGTTAAAAACAAAAA---------------ACTACATTCGAT--TT-CAAGGGTAGCCGCAGCAGCAGAAACAAAAGTAAAAACAACGTGTATT------------C-----------------------------------------------ATCT
droAna3 scaffold_13337:6510636-6510887 - G-A-AGCT---CTGCGAG-------------ACGAACGGACAAGTGCAAGAAACGGGTTAAGTAACATACGTTAACAC-A------------------------------C-----AC-----------------TCG-AC--G-----------------------GTGATCGGTCAGCGATCTTTGG-C---------------TTTGGCTTTGGATCAG------C----------------------AT-CAGCATCAGCGTCAG------------------CCACCTTTTTTCATCTGCAACCTCAACGTACGC--------------------ATCT---T--------TACTTTTGGGTCATCGG------------------------------AATCTGCGTTT-CAAGGGCAGA------------------------------G--TATTTTTTT-----TCCGTT--TAGCTGAATCACTAAACGGGGGTCACCACCAGA-------------
droBip1 scf7180000396709:244973-245200 - AAGAAGCT---CTGCGAG-------------AC----GGACAAGTGCAAGAAACGGGTTAAGTAAGATACGTTAACAC-A------------------------------C-----T--CGGACTCGGACTCGACTCG-AC--G-----------------------GTGATCGGTCAGCGATCTTTGG-C---------------TTTG------GATCAG------C----------------------ATCTAGCAT------CTG------------------C-----------------AACCTCAACGTACGC--------------------ATCT---T--------TACTTT--GGGCATCGG------------------------------AATCTGCGTTT-CAAGGGCAGA--------------------------TC--G--CATTTTTTTTGT--TCCGTT--TAGCTGAATCACTAAACGGGG-------------------------
droKik1 scf7180000301816:91369-91583 - CGA-GG--------------------------CGGCGGGACGAGTGCAAGAAACGGGTTGAG-AAGAAGCGTTAACACCA------------------------------C-----TCTCG------G-------------------------------------------GCGGTCAGCGATCTTTGGGC---------------CAAA-------AGCAGAAGCAGTAGCTAGCCAGCAGCAAGTCAGCATCT-----CATC-TCTG------------------C-----------------AA--------GACGC------GT-CTTTTGTGTCGT--T---T--------TGTTTT--GGGCATCGG------------------------------AATCCGAGTTT-CAAGGGCGGCAGCAGA--------------------CTGCGTGTGT------TAT--TCC-----------------------------------------------ATTC
droEle1 scf7180000491249:798277-798327 + ------------------------------------------AGTGCCAGAAACGGGTTAA----GAAACGTTAACAC------------------------------------------------------------------------------------------TCAACGGTCAGCGATCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3L:648829-648883 + G--------------------------------------AAGAGTGCAAGAAACGGGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGATCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:613554-613608 + G--------------------------------------AAGAGTGCAAGAAACGGGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGATCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:646252-646280 + G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT------GTGTGTGTGTGC--GTGT---GCGTGTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CGG-AGCGGAGCGACGAG-------------ACGAGACGACAAGTGCAGGAAACGGGTTAA----CACACACC-----------A---CAAAAGTAGAA--GAAGAAGCTC-----TCTCG------GA-----------C--A-----------------------AACAGCGGTCAGCGATCTTTTGGC---------------CATA-------AGCAG------C----------------------AGACAGCAGCATCTTCTG------------------CA--------------------------G-TGC------GTGCGCGTGTGC--GTAC---GCGTGTGTG-------------------AATATAACT-----------TACGATTCACTCGGTGATT-CAAGGCCAGC---------------------------------------------------------GGTCACTCAGAGGAGGCGGAGCAGCATCAGAAGCTACTTAACTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................AGACAGCAGCATCTTCTG------------------CA--------------------------G-TGC------GT......................................................................................................................................................................................................2617.0070110401000
...........................................................................................................................................................................................................................................................................................................................................CGTGTGC--GTAC---GCGTGTGTG-------------------A......................................................................................................................................................2115.0050200102000
........................................................................................................................................................................................................................................................................................................................................................................................ATATAACT-----------TACGATTCACTCGGT....................................................................................................................2315.0050220100000
........................................................................................................GAAGCTC-----TCTCG------GA-----------C--A-----------------------AACAGC.................................................................................................................................................................................................................................................................................................................................................................2213.0030100000002
...........................................................................................................................................................................................................................................................................................................................................CGTGTGC--GTAC---GCGTGTGTG-------------------AAT....................................................................................................................................................2313.0030200100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACTCAGAGGAGGCGG.........................1913.0030300000000
....................................................................................................................................................................................GATCTTTTGGC---------------CATA-------AGCAG------C----------------------...................................................................................................................................................................................................................................................................................2113.0030020100000
............GACGAG-------------ACGAGACGACAAGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGCAGCATCAGAAG...........1812.0020200000000
...........................................................................................................................................................................................................................................................................................................................................CGTGTGC--GTAC---GCGTGTGT...........................................................................................................................................................................1912.0020200000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------------------GGTCACTCAGAGGAGGCGGA........................2112.0020100000100
........................................................................................................GAAGCTC-----TCTCG------GA-----------C--A-----------------------AACAGCGGTC.............................................................................................................................................................................................................................................................................................................................................................2612.0020100001000
.......................................................................................................................................................................................................................................................................................................................................................................................AATATAACT-----------TACGATTCACTCGGT....................................................................................................................2412.0020200000000
.................................................................................................................................................................................AGCGATCTTTTGGC---------------CATA-------AGCAG------C----------------------AGAC...............................................................................................................................................................................................................................................................................2812.0020110000000
............................................................................................................................................................................................................................................................GACAGCAGCATCTTCTG------------------CA--------------------------G-TGC------GT......................................................................................................................................................................................................2512.0020010100000
.......................................................................................................................................................................................CTTTTGGC---------------CATA-------AGCAG------C----------------------AGACAG.............................................................................................................................................................................................................................................................................2411.0010000010000
............................................................................................................................................................................................................................................................................................................................................GTGTGC--GTAC---GCGTGTGTG-------------------AATATAAC...............................................................................................................................................2711.0010100000000
................................................................................................................................................................................................................................................................GCAGCATCTTCTG------------------CA--------------------------G-TGC------GT......................................................................................................................................................................................................2111.0010100000000
..........................................................................................................AGCTC-----TCTCG------GA-----------C--A-----------------------AACAGC.................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATAACT-----------TACGATTCACTCGGTGAT.................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................CTTCTG------------------CA--------------------------G-TGC------GTGCGCG.................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................ATATAACT-----------TACGATTCACTCGGTG...................................................................................................................2411.0010010000000
..............................................................................................................................................................................................................................................................................................................................................................................................CT-----------TACGATTCACTCGGTGATT-...............................................................................................................2111.0010000100000
.................G-------------ACGAGACGACAAGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------------------GGTCACTCAGAGGAGGCGGAGCAGC...................2611.0010000000001
.........................................................................................AAAAGTAGAA--GAAGAAGCTC-----T.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACTCAGAGGAGGCGGAGCA.....................2311.0010100000000
..................................................................................................A--GAAGAAGCTC-----TCTCG------GA-----------C--...............................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............................................GCAGGAAACGGGTTAA----CACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000000
...............................................................................................................................................A-----------------------AACAGCGGTCAGCGATCTTTTGGC---------------................................................................................................................................................................................................................................................................................................................................2511.0010000100000
...................................................AACGGGTTAA----CACACACC-----------A---CAAAAGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...............................................................................................................................................................................................................................................................AGCAGCATCTTCTG------------------CA--------------------------G-TGC------GTGC....................................................................................................................................................................................................2411.0010010000000
.........................................................................................................................................................................................TTTGGC---------------CATA-------AGCAG------C----------------------AGACAGCAG..........................................................................................................................................................................................................................................................................2511.0010000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------------------------------GGTCACTCAGAGGAGGCGGAGC......................2311.0011000000000
.................................GAGACGACAAGTGCAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..................................................................................................................................................................................................................................................................AGCATCTTCTG------------------CA--------------------------G-TGC------GT......................................................................................................................................................................................................1911.0010100000000
.....................................................................................................GAAGAAGCTC-----TCTCG------GA-----------C--A-----------------------.......................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................................................................................................................CTCG------GA-----------C--A-----------------------AACAGCGGTCAGCGAT.......................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGATT-CAAGGCCAGC---------------------------------------------------------GGT.........................................1811.0010000010000
........................................................................................................................G------GA-----------C--A-----------------------AACAGCGGTCAGC..........................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATT-CAAGGCCAGC---------------------------------------------------------GGTCACTC....................................2111.0010100000000
.....................................CGACAAGTGCAGGAAACGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................ATA-------AGCAG------C----------------------AGACAGCAGC.........................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................TATAACT-----------TACGATTCACTCGGTG...................................................................................................................2311.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GATT-CAAGGCCAGC---------------------------------------------------------GGTCACTCAGAG................................2611.0010100000000
............GACGAG-------------ACGAGACGACAAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................TAACT-----------TACGATTCACTCGGC....................................................................................................................2011.0010010000000
........................................................................................................................................................................................................................................................................................................................................GCGCGTGTGC--GTAC---GCGTGTGTG-------------------AAT....................................................................................................................................................2611.0010100000000
...................................................AACGGGTTAA----CACACACC-----------A---CAAAAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
...................................................................................................................................................................................................................................................................GCATCTTCTG------------------CA--------------------------G-TGC------GTGC....................................................................................................................................................................................................2011.0010100000000
..........................................................................................AAAGTAGAA--GAAGAAGCTC-----TCTCG------GA-----------C--A-----------------------.......................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
................................CGAGACGACAAGTGCAGGAAACGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........CGACGAG-------------ACGAGACGACAAGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................TATAACT-----------TACGATTCACTCGGTGATT-...............................................................................................................2611.0010010000000
................................................................................................................................................................................................................TA-------AGCAG------C----------------------AGACAGCAGCATC......................................................................................................................................................................................................................................................................2111.0010100000000
...................................GACGACAAGTGCAGGAAACGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....................................................................................................................................................................................................................................................................CATCTTCTG------------------CA--------------------------G-TGC------GTGCGCGTGTGC--..........................................................................................................................................................................................2711.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------------------------------GGTCACTCAGAGGAGGC...........................2011.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---------------------------------------------------------GGTCACTCAGAGGAGGC...........................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATTCACTCGGTGATT-CAAGGCCAG......................................................................................................2411.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................ATATAACT-----------TACGATTCACTCGGTGATT-...............................................................................................................2711.0010000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAGGAGGCGGAGCAGCA..................2011.0010100000000
.GG-AGCGGAGCGACGAG-------------ACGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................GTGTGC--GTAC---GCGTGTGTG-------------------AAT....................................................................................................................................................2211.0010100000000
..................................................................................................................................................................................................................................................................AGCATCTTCTG------------------CA--------------------------G-TGC------GTGCG...................................................................................................................................................................................................2211.0010100000000
...................................GACGACAAGTGCAGGAAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...............................................................................................................................................................................................................................................................AGCAGCATCTTCTG------------------CA--------------------------G-TGC------GTGCG...................................................................................................................................................................................................2511.0010100000000
..........................................................................................................................................................................................................................................................................CTG------------------CA--------------------------G-TGC------GTGCGCGTGTGC--..........................................................................................................................................................................................2111.0010000001000
.................................................................................................................................................................................AGCGATCTTTTGGC---------------CATA-------AGC..................................................................................................................................................................................................................................................................................................................2111.0010010000000
................................................................................................GAA--GAAGAAGCTC-----TCTCG------GA-----------C--...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
........................................................................C-----------A---CAAAAGTAGAA--GAAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATAACT-----------TACGATTCACTCGGT....................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................CGTGTGC--GTAC---GCGTGTGTG-------------------AATATAA................................................................................................................................................2711.0010000100000
.....................................................................................................GAAGAAGCTC-----TCTCG------GA-----------C--A-----------------------AACAGCG................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..G-AGCGGAGCGACGAG-------------ACGAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................TG------------------CA--------------------------G-TGC------GTGCGCGTGTG.............................................................................................................................................................................................1911.0010100000000
.............ACGAG-------------ACGAGACGACAAGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................G------GA-----------C--A-----------------------AACAGCGGTCAGCGAT.......................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................CGAGACGACAAGTGCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.....................................................................................................................................................................................................................................................................ATCTTCTG------------------CA--------------------------G-TGC------GTGCG...................................................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................TAACT-----------TACGATTCACTCGGT....................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................................GCGCGTGTGC--GTAC---GCGTGTGTG-------------------AATA...................................................................................................................................................2711.0010100000000
............GACGAG-------------ACGAGACGACAAGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATAACT-----------TACGATTCACTCGGTG...................................................................................................................2211.0010100000000
..........................................................................................................................................................................................................................................................................................................................................GCGTGTGC--GTAC---GCGTGTGTG-------------------AAT....................................................................................................................................................2411.0010100000000
................................................................................................................................................................................................................................................................................................A--------------------------G-TGC------GTGCGCGTGTGC--GT........................................................................................................................................................................................1911.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------------------------------GGTCACTCAGAGGAGGCGGA........................2311.0010100000000
.........................................................................................AAAAGTAGAA--GAAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.......................................................................................................................................................................................................................................................................CTTCTG------------------CA--------------------------G-TGC------GTGCGCGTT...............................................................................................................................................................................................2111.0010100000000
..........................................................TAA----CACACACC-----------A---CAAAAGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
.............................................................................................................................................................................................................................................................ACAGCAGCATCTTCTG------------------CA--------------------------G-TGC------GT......................................................................................................................................................................................................2411.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................TAC---GCGTGTGTG-------------------AATATAACT-----------TACG...............................................................................................................................2511.0010000001000
droPer2
CGG-AGCGGAGCGACGAG-------------ACGAGACGACAAGTGCAGGAAACGGGTTAA----CACACACC-----------A---CAAAAGTAGAA--GAAGAAGCTC-----TCTCG------GA-----------C--A-----------------------AACAGCGGTCAGCGATCTTTTGGC---------------CATA-------AGCAG------C----------------------AGACAGCAGCATCTTCTG------------------CA--------------------------G-TGC------GTGCGCGTGTGC--GTAC---GCGTGTGTG-------------------AACATAACT-----------TACGATTCACTCGGTGATT-CAAGGCCAGC---------------------------------------------------------GGTCACTCAGAGGAGGCGGAGCAGCATCAGAAGCTACTTAACTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................G-------------------AACATAACT-----------TACGATTCACTCGGT....................................................................................................................2518.008800000
.............................................................................................................................................................................GGTCAGCGATCTTTTGGC---------------................................................................................................................................................................................................................................................................................................................................1815.005500000
..........................................................................................................................................................................................................................................................................................................................................................................................ATAACT-----------TACGATTCACTCGGT....................................................................................................................2115.005500000
...............................................................................................................................................A-----------------------AACAGCGGTCAGCGATCTTTTGGC---------------C...............................................................................................................................................................................................................................................................................................................................2612.002200000
............GACGAG-------------ACGAGACGACAAGTGCAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000002
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACTCAGAGGAGGCGGAGC......................2112.002200000
...........................................................................................................................................................................................................................................................AGACAGCAGCATCTTCTG------------------CA--------------------------G-TGC------GT......................................................................................................................................................................................................2612.002002000
...........................................................................................................GCTC-----TCTCG------GA-----------C--A-----------------------AACAGC.................................................................................................................................................................................................................................................................................................................................................................1912.002200000
...................................................................................................................................................................................................................................................................................................................................................................G-------------------AACATAACT-----------TACGATTCACTCGGTG...................................................................................................................2612.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACTCAGAGGAGGCGG.........................1912.002000002
.................................................................................................................................................................................AGCGATCTTTTGGC---------------CATA-------AGCAG------C----------------------AGAC...............................................................................................................................................................................................................................................................................2812.002200000
.............................................................................................GTAGAA--GAAGAAGCTC-----TCC.......................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................CTC-----TCTCG------GA-----------C--A-----------------------AACAGCGGTCAGC..........................................................................................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................................................................................A-----------------------AACAGCGGTCAGCGATCT.....................................................................................................................................................................................................................................................................................................................................................1911.001001000
.............................................................................................................................................................................................................................................................................................................................................................................................................CGATTCACTCGGTGATT-CAAGGCCA.......................................................................................................2511.001010000
.........................................................................................................................................................................................................................................................................TCTG------------------CA--------------------------G-TGC------GTGCGCGTGTGC--..........................................................................................................................................................................................2211.001000001
.....GCGGAGCGACGAG-------------ACGAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................AGACAGCAGCATCTTCTG------------------CA--------------------------G-TGC------GTGC....................................................................................................................................................................................................2811.001001000
.......................................................................................................................................................................................................................................................................................................................................................................................AACATAACT-----------TACGATTCACTCGGT....................................................................................................................2411.001010000
.....................................................................................................GAAGAAGCTC-----TCTCG------GA-----------C--...............................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........................................................................C-----------A---CAAAAGTAGAA--GAAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................................................ATCTTCTG------------------CA--------------------------G-TGC------GTGCGC..................................................................................................................................................................................................2011.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................GATT-CAAGGCCAGC---------------------------------------------------------GGTCACTC....................................2211.001100000
..........................................................................................................................................................................AGCGGTCAGCGATCTTTTGGC---------------C...............................................................................................................................................................................................................................................................................................................................2211.001100000
..............CGAG-------------ACGAGACGACAAGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
...........................................................................................................................................................................GCGGTCAGCGATCTTTTGGC---------------................................................................................................................................................................................................................................................................................................................................2011.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................TTCACTCGGTGATT-CAAGGCCAGC---------------------------------------------------------G...........................................2511.001010000
....................................................................................A---CAAAAGTAGAA--GAAGAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........AGCGACGAG-------------ACGAGACGACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
............................................................................................................................................................................................................................................................GACAGCAGCATCTTCTG------------------CA--------------------------G-TGC------GT......................................................................................................................................................................................................2511.001000001
......................................................................................................AAGAAGCTC-----TCTCG------GA-----------C--A-----------------------.......................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.............................................................................................................................................................................................GC---------------CATA-------AGCAG------C----------------------AGACAGCAGCATCT.....................................................................................................................................................................................................................................................................2611.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCACTCAGAGGAGGCGGAGC......................2211.001010000
............................................................................................AGTAGAA--GAAGAAGCTC-----TCTCG------GA-----------C--...............................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................CGACAAGTGCAGGAAACGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..........................................................................................................................................................................AGCGGTCAGCGATCTTTTGGC---------------................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................................................................GAAGAAGCTC-----TCTCG------GA-----------C--A-----------------------AACAGC.................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..................................................................................................................................................................................................................................................................AGCATCTTCTG------------------CA--------------------------G-TGC------G.......................................................................................................................................................................................................1811.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATT-CAAGGCCAGC---------------------------------------------------------GGTCACTC....................................2111.001100000
......................................GACAAGTGCAGGAAACGGGTTAA----CAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---------------------------------------------------------GGTCACTCAGAGGAGGCGGAGC......................2611.001100000
.....................................................................................................................CTCG------GA-----------C--A-----------------------AACAGCGGTCAGCGATCTT....................................................................................................................................................................................................................................................................................................................................................2711.001000001
...............................................................................................................................................A-----------------------AACAGCGGTCAGCGATCTTTTGGC---------------................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................GCTC-----TCTCG------GA-----------C--A-----------------------AACAGCG................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.................................................................................................................................................................................AGCGATCTTTTGGC---------------CATA-------AGCAG------C----------------------...................................................................................................................................................................................................................................................................................2411.001100000
..............................................................................................................................................................................GTCAGCGATCTTTTGGC---------------C...............................................................................................................................................................................................................................................................................................................................1811.001100000
...........................................................................................................GCTC-----TCTCG------GA-----------C--A-----------------------AACAGCGGTCAGC..........................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................................GACAAGTGCAGGAAACGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCAGAGGAGGCGGAGCAGC...................2211.001010000
...........................................................................................................................................................................GCGGTCAGCGATCTTTTGGC---------------C...............................................................................................................................................................................................................................................................................................................................2111.001100000
.......GGAGCGACGAG-------------ACGAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...........................................................................................................................................................................................................................................................................................................................................CGTGTGC--GTAC---GCGTGTGTG-------------------.......................................................................................................................................................2020.501001000
............................................................................................................................................................................................................................................................................................................................................GTGTGC--GTAC---GCGTGTGTG-------------------.......................................................................................................................................................1920.501010000
............................................................................................................................................................................................................................................................................................................................................GTGTGC--GTAC---GCGTGTGT...........................................................................................................................................................................1820.501010000
droWil2
CGA-GGCGAGGC---AAGGCAAACCGCGAACAGCAAACGACAAGTGCAAGAAACTGGTTAG----CAC-----CAC--------A---CACAGA-----TTGAAGAAGCTCCGCACTATCC------GACGC-----------A-----------------------CAGAGCGGTCAGCGATCTTTGC-C---------------CATAAAT----ATCAT------C----------------------AGCCAGCAGCAGCCTCAG------------------CA--------------------------G-TCGGAACGACTAA-ATTGTGC--GTGT---T--------TTTTTTT--TGTTTTTAAA-------TACTAAAAAAAAACACAACAACTTGGAT--TTCCAAGGGTATT------------------------------G--GAGTTATTT-----AACGTTTTT-AGTGATTCAGAGAGGGGG--TCACCAGCAG-------------CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGAGAGGGGG--TCACCAGCA...............2412.00200020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAGAGGGGG--TCACCAGC................1912.00200110
..................................................................................................................ACTATCC------GACGC-----------A-----------------------CAGAGC.................................................................................................................................................................................................................................................................................................................................................................1912.00200110
.................................................................................................................CACTATCC------GACGC-----------A-----------------------CAGAGC.................................................................................................................................................................................................................................................................................................................................................................2012.00200020
............................................................................................GA-----TTGAAGAAGCTCCGCACT.........................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-AGTGATTCAGAGAGGGG...........................1911.00100010
....................................................................................A---CACAGA-----TTGAAGAAGCTCCGC............................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...........................................................................................................................................................................................................................CAT------C----------------------AGCCAGCAGCAGCCTCAG------------------CA--------------------------G-.................................................................................................................................................................................................................2511.00101000
.......................................................................................................................CC------GACGC-----------A-----------------------CAGAGCGGTCAGCGAT.......................................................................................................................................................................................................................................................................................................................................................2411.00100100
..................................................................................................................................GC-----------A-----------------------CAGAGCGGTCAGCGATCTTT...................................................................................................................................................................................................................................................................................................................................................2311.00100010
................................................................................................................GCACTATCC------GACGC-----------A-----------------------CAGAGCGGTCAGC..........................................................................................................................................................................................................................................................................................................................................................2811.00100010
.....................................................................................................GAAGAAGCTCCGCACTATC......................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
..................................................................AC-----CAC--------A---CACAGA-----TTGAAGAAGCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--GAGTTATTT-----AACGTTTTT-AGT.........................................2211.00100010
..................................AAACGACAAGTGCAAGAAACTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAT--TTCCAAGGGTATT------------------------------G--G...................................................................2111.00100010
....................................................................................A---CACAGA-----TTGAAGAAGCTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
...........................................................................................................................................................................................................................CAT------C----------------------AGCCAGCAGCAGCCTCAG------------------CA--------------------------G-T................................................................................................................................................................................................................2611.00100010
................................................................................................................GCACTATCC------GACGC-----------A-----------------------CAGAGC.................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..................................................................................................................................GC-----------A-----------------------CAGAGCGGTCAGCGATCTT....................................................................................................................................................................................................................................................................................................................................................2211.00100100
........................................................................................................................................................................................TTTGC-C---------------CATAAAT----ATCAT------C----------------------AGCC...............................................................................................................................................................................................................................................................................2311.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAT--TTCCAAGGGTATT------------------------------G--GAGTT...............................................................2511.00100100
.................................................................................................................................................................................................................................................................CAGCAGCCTCAG------------------CA--------------------------G-TCGGAACGACTAA-...................................................................................................................................................................................................2811.00100010
.........................................................................................ACAGA-----TTGAAGAAGCTCCGCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
................................................................................................................GCACTATCC------GACGC-----------A-----------------------CAGAGCGGT..............................................................................................................................................................................................................................................................................................................................................................2411.00100100
......................................GACAAGTGCAAGAAACTGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTT-----AACGTTTTT-AGTGATT.....................................2311.00100010
..........................................................................................................................................................................................................................................................................CAG------------------CA--------------------------G-TCGGAACGACTA.....................................................................................................................................................................................................1811.00100100
.........................................................................................................................................................................................................................ATCAT------C----------------------AGCCAGCAGCAGCCTC...................................................................................................................................................................................................................................................................2211.00100010
................................................................................................................................................................................................................................................................GCAGCAGCCTCAG------------------CA--------------------------G-TCG..............................................................................................................................................................................................................1911.00100010
..................................................................................................................................................................................................................................................................AGCAGCCTCAG------------------CA--------------------------G-TCGGAACGACT......................................................................................................................................................................................................2511.00100010
...................................................................................................................................................................................................................AT----ATCAT------C----------------------AGCCAGCAGCAGCCTCAG------------------CA--------------------------...................................................................................................................................................................................................................2811.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTT-AGTGATTCAGAGAGGG............................2211.00100100
......................................................................................................................................................................................................................................................................................................................................................................................................................GGAT--TTCCAAGGGTATT------------------------------G--GA..................................................................2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGAGAGGGGG--TCACC...................1911.00100010
...................................................................................................................................................................................................................AT----ATCAT------C----------------------AGCCAGCAGC.........................................................................................................................................................................................................................................................................1811.00100010
...........................................................AG----CAC-----CAC--------A---CACAGA-----TTGAAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTT-----AACGTTTTT-AGTG........................................1811.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGAGAGGGGG--TCACCAGC................2211.00100010
..........................CGAACAGCAAACGACAAGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................................................................................................................................................................................................................................................................................................................................GACTAA-ATTGTGC--GTGT---T--------..........................................................................................................................................................................1811.00100010
............................................................................................GA-----TTGAAGAAGCTCCGCACTATCC------GA.............................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..........................................................................AC--------A---CACAGA-----TTGAAGAAGCTCCGCACT.........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
..................................................................................................................................................................................................................................................................AGCAGCCTCAG------------------CA--------------------------G-TCGGAAC..........................................................................................................................................................................................................2111.00100010
..................................................................AC-----CAC--------A---CACAGA-----TTGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..............................................................................................................................................................................................................................................................CAGCAGCAGCCTCAG------------------CA--------------------------G-TCGGAACG.........................................................................................................................................................................................................2611.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAGGGGG--TCACCAGCAG-------------C2111.00100010
.................................................................................................................................................................................................................................................................CAGCAGCCTCAG------------------CA--------------------------G-TCG..............................................................................................................................................................................................................1811.00100010
...................................................................................................................CTATCC------GACGC-----------A-----------------------CAGAGCGGTCAGC..........................................................................................................................................................................................................................................................................................................................................................2511.00100100
..............................................................................................................CCGCACTATCC------GACGC-----------A-----------------------CAGAGC.................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.................................................................................................................................CGC-----------A-----------------------CAGAGCGGTCAGCGATCT.....................................................................................................................................................................................................................................................................................................................................................2211.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCAGAGAGGGGG--TCACCAGCAG-------------C2611.00100010
..................................................................................................................................GC-----------A-----------------------CAGAGCGGTCAGCGATCTTTG..................................................................................................................................................................................................................................................................................................................................................2411.00100100
............................................................................................................................................................................................................................AT------C----------------------AGCCAGCAGCAGCCTCA..................................................................................................................................................................................................................................................................2011.00100010
.................................................................CAC-----CAC--------A---CACAGA-----TTGAAGAAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001
........................................................................................................................................................................AGAGCGGTCAGCGATCTTTGC-C---------------................................................................................................................................................................................................................................................................................................................................2211.00100010
.......................................................................................................................................................................................CTTTGC-C---------------CATAAAT----ATCAT------C----------------------AGCC...............................................................................................................................................................................................................................................................................2411.00100010
...........................................................................................................................................................................................................................CAT------C----------------------AGCCAGCAGCAGCCT....................................................................................................................................................................................................................................................................1911.00100010
..........................................................TAG----CAC-----CAC--------A---CACAGA-----TTGAAGAAGCTC...............................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
................................................................................................................................................................................................................................................................GCAGCAGCCTCAG------------------CA--------------------------G-TCGGAACGA........................................................................................................................................................................................................2511.00100010
.........GGC---AAGGCAAACCGCGAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTT-----AACGTTTTT-AGTGA.......................................2111.00100010
..A-GGCGAGGC---AAGGCAAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100010
droVir3
GCG------------AAG-------------ACGACACGACAAGTGCAAGAAACGAGTTA---------CGATAACAA--CA-CA---C--AAAGCACA--GAAGAAGCGT-----T--CAGATTTAGACGCAC-TTAAAAAGA-GAGACAGACAGAGAAAGAGAGAGAGAGAGGTCAGCGATCTTTAA-CCAGCTCCAAGCTCCTCCTA-------AACAG------C----------------------GT-CGGCATCACCATTAG------------------CA--------------------------G-CCC------ATGC-CTTGTGC--GTGTGTTA--------TTTTTT--A----------AACAAAACATTA--------AATAAAACATTCGAT--TT-CAAGGGTAGTGGCAGAAG------------------CAACGTGTGTA-----TATCAG-CAGC--TAGCCAAGTGATTC-------------------AGCTGCTCAGCGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................GAGAGAGAGGTCAGCGAT.......................................................................................................................................................................................................................................................................................................................................................1812.002200000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCAAGTGATTC-------------------AGCTGCT......2112.002001000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGTAGTGGCAGAAG------------------CAACGTGT...................................................................2512.002000000000000000000000000000000000000000000000000000000000000020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGTGTA-----TATCAG-CAGC--..............................................2012.002000000000000000000000000000001000000000000000000000000000000010
........................................................................................................................................................................................................................................................................ATTAG------------------CA--------------------------G-CCC------ATGC-CTTGTGC--GT........................................................................................................................................................................................2412.002000000000000001001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................A-------AACAG------C----------------------GT-CGGCATCAC.......................................................................................................................................................................................................................................................................1812.002020000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................A-------AACAG------C----------------------GT-CGGCATCACC......................................................................................................................................................................................................................................................................1912.002200000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................GAGAGAGAGAGGTCAGCGATCTTTAA-CC..............................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTGGCAGAAG------------------CAACGTGTG..................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
GCG------------AAG-------------ACGACACGACAAGTGCAAGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CAAGCTCCTCCTA-------AACAG------C----------------------GT-CGGCAT..........................................................................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGTAGTGGCAGAAG------------------C..........................................................................1911.001000000100000000000000000000000000000000000000000000000000000000
.CG------------AAG-------------ACGACACGACAAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................A--CA-CA---C--AAAGCACA--GAAGAAGCGT-----T--.......................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................AAGCTCCTCCTA-------AACAG------C----------------------GT-................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GATCTTTAA-CCAGCTCCAAG.....................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................CTCCTCCTA-------AACAG------C----------------------GT-CGGCAT..........................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAGAAG------------------CAACGTGTGTA-----...........................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...................................................AACGAGTTA---------CGATAACAA--CA-CA---C--AAA................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GAAG------------------CAACGTGTGTA-----TATCAG-CAGC--..............................................2511.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................ATGC-CTTGTGC--GTGTGTT...................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--TAGCCAAGTGATTC-------------------AGCTGCTCAGC..2611.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CGGCATCACCATTAG------------------CA--------------------------G-CC...............................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAG------------------CAACGTGTGTA-----TATC.......................................................2311.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAAGTGATTC-------------------AGCTGCTCAGC..2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAG------------------CAACGTGTGT.................................................................1811.001000000000001000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GAT--TT-CAAGGGTAGTGGCAGA...............................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CATTAG------------------CA--------------------------G-CCC------ATGC-CTTGTGC--GT........................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................ACA--GAAGAAGCGT-----T--CAGA...................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000001000000000000000000000000000000000000000
....................................................ACGAGTTA---------CGATAACAA--CA-CA---C--AAAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------CAACGTGTGTA-----TATCAG-C...................................................2011.001000000000000000000000000000001000000000000000000000000000000000
......................................GACAAGTGCAAGAAACGAGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
......................................................GAGTTA---------CGATAACAA--CA-CA---C--...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................CAGCGATCTTTAA-CCAGCT..........................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TTAGACGCAC-TTAAAAAGA-GA...........................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................TCAGCGATCTTTAA-CCAGCTCC........................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000100
...............................ACGACACGACAAGTGCAAGAAACGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAGC--TAGCCAAGTGATTC-------------------.............2011.001000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................A-GAGACAGACAGAGAAAGAGAGA.......................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAG------------------CAACGTGTGTA-----TATCAG-C...................................................2511.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................ACA--GAAGAAGCGT-----T--CAGATTTA...............................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................CAC-TTAAAAAGA-GAGACAGACAGAGAA..............................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGTAGTGGCAGAAG------------------CAACGTGTGT.................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CAGC--TAGCCAAGTGATTC-------------------AGCT.........2311.001000000000000000000000000000010000000000000000000000000000000000
.....................................................CGAGTTA---------CGATAACAA--CA-CA---......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................CGATAACAA--CA-CA---C--AAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................ATGC-CTTGTGC--GTGTGTTA--------TTTT......................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
......................................GACAAGTGCAAGAAACGAGTTA---------CGATAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GATCTTTAA-CCAGCTCCAAGCTCCTC...............................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................CTCCTA-------AACAG------C----------------------GT-CGGC............................................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AGACAGAGAAAGAGAGAGAGAGAGGT..............................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AAGAGAGAGAGAGAGGTCAG...........................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------CAACGTGTGTA-----TATCAG-CAGC--..............................................2211.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGATTC-------------------AGCTGCTCAGC..2111.001000000000000000000000000000000001000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ATAAAACATTCGAT--TT-CAAGG..........................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................CGCAC-TTAAAAAGA-GAGACAGAC....................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................AGAGAGGTCAGCGATCTTTAA-CCAGC...........................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GAAG------------------CAACGTGTGTA-----TATCAG-CA..................................................2311.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................TCCTCCTA-------AACAG------C----------------------GT-CGGCA...........................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AACATTCGAT--TT-CAAGGGTAGTGGCA.................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TCACCATTAG------------------CA--------------------------G-CCC------ATG.....................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAG------------------CAACGTGTGTA-----TATCAG-CA..................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------CAACGTGTGTA-----TATCAG-CA..................................................2011.001000000000000000000000000100000000000000000000000000000000000000
..............................................CAAGAAACGAGTTA---------CGATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................ACA--GAAGAAGCGT-----T--CAGATTTAGACG...........................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TCCAAGCTCCTCCTA-------AACAG------C----------------------GT-C...............................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................TAGACGCAC-TTAAAAAGA-GA...........................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAG------------------CAACGTGTGTA-----TATCAG-CA..................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--TAGCCAAGTGATTC-------------------AGCTGCT......2211.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................GAAGAAGCGT-----T--CAGATTTAGAC............................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................CA--------------------------G-CCC------ATGC-CTTGTGC--GTGT......................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................ATTAG------------------CA--------------------------G-CCC------ATGC-CTTGTGC--GTGT......................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--TAGCCAAGTGATTC-------------------AGC..........1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AACAAAACATTA--------AATAAAACATTCG......................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................ACA--GAAGAAGCGT-----T--CAGAT..................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................CAC-TTAAAAAGA-GAGACA.......................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AAG------------------CAACGTGTGTA-----TATCAG-CAGC--..............................................2411.001000100000000000000000000000000000000000000000000000000000000000
GCG------------AAG-------------ACGACACGACAAGTGCAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................AAAAGA-GAGACAGACAGAGAAA.............................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................A--------------------------G-CCC------ATGC-CTTGTGC--GTGT......................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................GAGAGGTCAGCGATCTTTAA-CCAGCTC.........................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................AACAA--CA-CA---C--AAAGCACA--GAAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................CATTAG------------------CA--------------------------G-CCC------ATGC-CTTGTGC--..........................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
........................................................GTTA---------CGATAACAA--CA-CA---C--A..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.CG------------AAG-------------ACGACACGACAAGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................TTAA-CCAGCTCCAAGCTCCTCCTA-------AACAG------C----------------------GT-CGGCATCACC......................................................................................................................................................................................................................................................................4211.001000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA-----TATCAG-CAGC--TAGCCAAGT.....................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................ACGACAAGTGCAAGAAACGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
........................................CAAGTGCAAGAAACGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................AA--CA-CA---C--AAAGCACA--GAAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................GTTA---------CGATAACAA--CA-CA---C--AAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................GTTA---------CGATAACAA--CA-CA---C--AAAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GAGGTCAGCGATCTTTAA-CCA.............................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AAAACATTCGAT--TT-CAAGG..........................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAT--TT-CAAGGGTAGTGG...................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AACAG------C----------------------GT-CGGCATCACCATT...................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................GACAGACAGAGAAAGAGA.........................................................................................................................................................................................................................................................................................................................................................................1850.402000000000000000000000000000000000200000000000000000000000000000
.............................................................................................................................................................GAAAGAGAGAGAGAGAGGT..............................................................................................................................................................................................................................................................................................................................................................1930.331000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................GACAGAGAAAGAGAGAGA.....................................................................................................................................................................................................................................................................................................................................................................18200.051000000000001000000000000000000000000000000000000000000000000000
.........................................................................................................................................................CAGAGAAAGAGAGAGAGAGA.................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
droMoj3
C------------------------------ACGACGCGACAAGTGCACGAAACGAGTTA---------CGATAACAC--AA-CA---TAAAA------TTGAAGAAGCGC-------TCG------GT-----------C--AAGCAAGCGA--GAGAGAGAGAGAGAGAGAGGTCAGCGATCTTTAA-ACAGCTCCAAGCTC--CAT---------------------------------------------------CATCATTAGTAGCAACAAAATCAGCATCA--------------------------G-CGC------ATGT-CTGGTGC--GTGT---G--------TGTTTT--A----------AACAAAAC------------AATAATACATTCGGT--TT-CAAGGGTAGC-GCAGAAG------------------CGACGTGTGTG-----TATTAGCCAGG--TAGCCAAGTG--------------------------------ATTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTG-----TATTAGCCAGG--T.............................................1811.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-GCAGAAG------------------CGACGTGTGT.................................................................2011.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGGTAGC-GCAGAAG------------------CGAC.......................................................................2111.001100000
......................................................................................................................TCG------GT-----------C--AAGCAAGCGA--GAGAGAGA...........................................................................................................................................................................................................................................................................................................................................................................2420.501100000
..............................................................................................................................................................................................................................................................................................................................GC------ATGT-CTGGTGC--GTGT---G--------T.........................................................................................................................................................................1920.501100000
............................................................................AC--AA-CA---TAAAA------TTGAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501100000
...........................................................................................................................................................................................................................................................................AGTAGCAACAAAATCAGCATCA--------------------------G-.................................................................................................................................................................................................................2320.501000100
.................................................GAAACGAGTTA---------CGATAACAC--..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501100000
........................................................................................................................................................................................................................................................................................................................................................................................ACAAAAC------------AATAATACATTCGGT--..................................................................................................................2220.501100000
............................................................................................................................................................................................................................................................................................................................................................................................AAC------------AATAATACATTCGGT--TT-...............................................................................................................2020.501100000
..............................................................................................................................................................................................................................................................................................................................................................................................................AATACATTCGGT--TT-CAAGGGT........................................................................................................2120.501100000
..............................................................................................................................................................................................................................................................................................................................GC------ATGT-CTGGTGC--GTGT---G--------TGT.......................................................................................................................................................................2120.501000100
.............................................GCACGAAACGAGTTA---------CGATAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000010
................................................................................................................................................AGCAAGCGA--GAGAGAGAGAGAGAGA...................................................................................................................................................................................................................................................................................................................................................................25100.101000001
................................................................................................................................................AGCAAGCGA--GAGAGAGAGA.........................................................................................................................................................................................................................................................................................................................................................................19150.071000001
droGri2
TG-----------------------------------CGACAAGTGCAAGAAACGAGTTA---------CGATAACAA--CAGCAAAAA--AAAGCACACTGAAGAAGCAC------CTCA------GA-----------C--A-GAGAGAGATAGAGAA--AGAGAGAGAGAGGTCAGCGATCTTTAG-CCAGC--------------------------------------------------------AGCT-----CATCATTTG------------------T-----------------TA--------G-CGC------GTGCATATGTATACATAT---GTATGTGTG---------TGCAGTTAAAAACAAAAA---------------ACTACATTCGAT--TT-CAAGGGTAGCCGCAGCAGCAGAAACAAAAGTAAAAACAACGTGTATT------------C-----------------------------------------------ATCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
G-A-AGCT---CTGCGAG-------------ACGAACGGACAAGTGCAAGAAACGGGTTAAGTAACATACGTTAACAC-A------------------------------C-----AC-----------------TCG-AC--G-----------------------GTGATCGGTCAGCGATCTTTGG-C---------------TTTGGCTTTGGATCAG------C----------------------AT-CAGCATCAGCGTCAG------------------CCACCTTTTTTCATCTGCAACCTCAACGTACGC--------------------ATCT---T--------TACTTTTGGGTCATCGG------------------------------AATCTGCGTTT-CAAGGGCAGA------------------------------G--TATTTTTTT-----TCCGTT--TAGCTGAATCACTAAACGGGGGTCACCACCAGA-------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................TTGG-C---------------TTTGGCTTTGGATCAG------C----------------------AT-CAG.............................................................................................................................................................................................................................................................................2712.002000002
................................CGAACGGACAAGTGCAAGAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002020000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTAAACGGGGGTCACCA..................2112.002200000
.........................................................................................................................................................................................................................ATCAG------C----------------------AT-CAGCATCAGCGTCAG------------------CCACC..........................................................................................................................................................................................................................................2811.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGAATCACTAAACGGGGGT.......................2211.001100000
........................................................................TAACAC-A------------------------------C-----AC-----------------TCG-AC--G-----------------------GTG....................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................................AACATACGTTAACAC-A------------------------------C-----AC-----------------TCG-AC--G-----------------------GT.....................................................................................................................................................................................................................................................................................................................................................................2711.001010000
......................................................................................................................................................................................................................TGGATCAG------C----------------------AT-CAGCATCAGCGTC...................................................................................................................................................................................................................................................................2411.001010000
....................................................................................................................................................................................................................................................................................................TTTTTTCATCTGCAACCTCAAC....................................................................................................................................................................................................................2211.001010000
.........................................AAGTGCAAGAAACGGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
.........................................................................AACAC-A------------------------------C-----AC-----------------TCG-AC--G-----------------------GTGATCG................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................................................................................................................................................................ATCAG------C----------------------AT-CAGCATCAGCGTC...................................................................................................................................................................................................................................................................2111.001001000
......................................................................................................................................................................................................................TGGATCAG------C----------------------AT-CAGCATCAGCGTCAG------------------CC.............................................................................................................................................................................................................................................2811.001000010
................................................................................................................................................................................................................................................................................................................................................................................ATCGG------------------------------AATCTGCGTTT-CAAGGGC........................................................................................................2311.001100000
.....................................................................................................................................................................................ATCTTTGG-C---------------TTTGGCTTTGGATCAG------C----------------------...................................................................................................................................................................................................................................................................................2611.001100000
...............................ACGAACGGACAAGTGCAAGAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...........................................................................................................................................AC--G-----------------------GTGATCGGTCAGCGATCT.....................................................................................................................................................................................................................................................................................................................................................2111.001000001
....................................................................................................................AC-----------------TCG-AC--G-----------------------GTGATCGGTCAGCGAT.......................................................................................................................................................................................................................................................................................................................................................2411.001010000
............................................................AGTAACATACGTTAACAC-A------------------------------C-----AC-----------------TCG-AC--...............................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.....GCT---CTGCGAG-------------ACGAACGGACAAGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.......................................................................................................................................................................................CTTTGG-C---------------TTTGGCTTTGGATCAG------C----------------------AT-C...............................................................................................................................................................................................................................................................................2711.001010000
..................................................................ATACGTTAACAC-A------------------------------C-----AC-----------------TCG-AC--...............................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..............................................................................................................................................................................................C---------------TTTGGCTTTGGATCAG------C----------------------AT-CAGC............................................................................................................................................................................................................................................................................2411.001010000
................................................................................................................................................................................................................................................................................................................CAACCTCAACGTACGC--------------------ATCT---T--------TACTTT....................................................................................................................................................................2711.001100000
droBip1
AAGAAGCT---CTGCGAG-------------AC----GGACAAGTGCAAGAAACGGGTTAAGTAAGATACGTTAACAC-A------------------------------C-----T--CGGACTCGGACTCGACTCG-AC--G-----------------------GTGATCGGTCAGCGATCTTTGG-C---------------TTTG------GATCAG------C----------------------ATCTAGCAT------CTG------------------C-----------------AACCTCAACGTACGC--------------------ATCT---T--------TACTTT--GGGCATCGG------------------------------AATCTGCGTTT-CAAGGGCAGA--------------------------TC--G--CATTTTTTTTGT--TCCGTT--TAGCTGAATCACTAAACGGGG-------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CGA-GG--------------------------CGGCGGGACGAGTGCAAGAAACGGGTTGAG-AAGAAGCGTTAACACCA------------------------------C-----TCTCG------G-------------------------------------------GCGGTCAGCGATCTTTGGGC---------------CAAA-------AGCAGAAGCAGTAGCTAGCCAGCAGCAAGTCAGCATCT-----CATC-TCTG------------------C-----------------AA--------GACGC------GT-CTTTTGTGTCGT--T---T--------TGTTTT--GGGCATCGG------------------------------AATCCGAGTTT-CAAGGGCGGCAGCAGA--------------------CTGCGTGTGT------TAT--TCC-----------------------------------------------ATTCSizeHit CountTotal NormTotal
No Reads
droEle1
------------------------------------------AGTGCCAGAAACGGGTTAA----GAAACGTTAACAC------------------------------------------------------------------------------------------TCAACGGTCAGCGATCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
G--------------------------------------AAGAGTGCAAGAAACGGGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGATCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................AGAAACGGGTTAG----CACACGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------TC....................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------T.....................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..................................................................ACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGT..............................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGA........................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGC..........................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
......................................................................GATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGC..........................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGAGTGCAAGAAACGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000
..........................................................................GCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGA........................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................AAACGGGTTAG----CACACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAG...........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...................................................AACGGGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................GGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------T.....................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................CACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAG...........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................ACGATAGCAC------------------------------------------------------------------------------------------TCAACGGT..............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.....................................................CGGGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCA...................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................TTAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGC..........................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CACGATAGCAC------------------------------------------------------------------------------------------TCAACGG...............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ACGGGTTAG----CACACGATAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGA........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGATC......................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..........................................AGTGCAAGAAACGGGTTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGAT.......................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...........................................................AG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTC.............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................ACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCG.........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................GAAACGGGTTAG----CACACGATAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TCAACGGTCAGCGATCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ACGGGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCA...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GTGCAAGAAACGGGTTAG----C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.....................................................CGGGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACG................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGC..........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................CGGGTTAG----CACACGATAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGA........................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................AAGAAACGGGTTAG----CACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................CAC------------------------------------------------------------------------------------------TCAACGGTCAGCGATCTT....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................GATAGCAC------------------------------------------------------------------------------------------TCAACGGTCA............................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TGCAAGAAACGGGTTAG----CACACGATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................CACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGA........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTC.............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAG...........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................AACGGGTTAG----CACACGATAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................GCAAGAAACGGGTTAG----CA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................AG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACG................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................ACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTC.............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCG.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTATC...........................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
G--------------------------------------AAGAGTGCAAGAAACGGGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGATCTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................ACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCA............................................................................................................................................................................................................................................................................................................................................................2212.00200002000000000000
...........................................GTGCAAGAAACGGGTTAG----.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..................................................AAACGGGTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACG................................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
............................................TGCAAGAAACGGGTTAG----.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.....................................................................CGATAGCAC------------------------------------------------------------------------------------------TCAACGGTCAGCGATCTT....................................................................................................................................................................................................................................................................................................................................................2711.00100000000000001000
.........................................GAGTGCAAGAAACGGGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..........................................................TAG----CACACGATAGCAC------------------------------------------------------------------------------------------TCAACGGTC.............................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
........................................AGAGTGCAAGAAACGGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
........................................................GTTAG----CACACGATAGCAC------------------------------------------------------------------------------------------T.....................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
.................................................GAAACGGGTTAG----CACACGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...............................................AAGAAACGGGTTAG----CACACGATAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
droEre2
G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT------GTGTGTGTGTGC--GTGT---GCGTGTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................GTGTGTGTGTGC--GTGT---GCGTGTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------25120.0810000010

Generated: 05/18/2015 at 06:32 AM