ID:

dps_3240

 Coordinate:

XR_group8:1430215-1430365 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.3 -16.0 -15.5 -15.3

Flybase annnotation

exon [dpse_GLEANR_8102:2]; CDS [Dpse\GA28388-cds]; intron [Dpse\GA28388-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAAGCCAGCAAGCATACTATCGCCACAACGACAACTGCTTACATTTCACCTAATGCTAATGCTAAATGCACAAAACGAGCAGAATACATCGAGAGAACATCGAGTATAGCAGCAAAACGCAAAACAAGCAAGCAGCAAGGCTGTCCTGTCTCGTGCGCCTACTTTAAAATTAGATGTAAACTTAACGTTTCTACATTACAGCCAAGTTGTCTGCCCAAAATGGGCCGCTTGTGTCTCTACCAAGGGTGCAC
***********************************************************************************.........................((.(((....(((..((.(((..........)))))..)))....)))))********************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM343916
embryo
 M022
male body		 V112
male body		 M062
head
 SRR902012
CNS imaginal disc
 GSM444067
head
....................................................................................................CGAGTGTAGCAGAAGAACGC................................................................................................................................... 20 3 4 51.75 207 154 0 0 31 22 0 0 0
...................................................................................ATACATCGAGAGAACATCGAGT.................................................................................................................................................. 22 0 1 3.00 3 1 1 1 0 0 0 0 0
..........................................................................................................................................GGCTGTCCTGTCTCGTGCGC............................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0 0 0
.......GCAAGCATACTATCGCCACA................................................................................................................................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................CTCGTGCGCCTACTTTAAAA.................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0
........................ACAACGACAACTGCTTACA................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................TTCTACATTACAGCCAAGTTGTC........................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................TCCTGTCTCGTGCGCCTAC......................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0
.......................................................................AAAACGAGCAGAATACATCGAGA............................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................AGCAAGGCTGTCCTGTCT.................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................CAACTGCTTACATTTCACCTAAT..................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................GATCCACAAAACGAGCAGAATACATCGA............................................................................................................................................................... 28 2 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................AACGAGCAGAATACATCGA............................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0
...GCCAGCAAGCATACTATCGCCACAAC.............................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................GAGAGAACATCGAGTATAGCA............................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................GAGCAGAATACATCGAGAGAA.......................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................GAGCAGAATACATCGAGAGAAC......................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................CTAGAGAACATAGAGTATAGC............................................................................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................AGCAAGGCTGTCCTGTCTCGTGCGCCT........................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0
............................................TTCACCTAATGCTAATGCTAAAT........................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................ACATTACAGCCAAGTTGTCTGCCCAAA................................ 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................GTTTCTACATTACAGCCAAGTTGTCTGCC.................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................................................AAACGAGCAGAATACATCG................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................TTCTACATTACAGCCAAGT............................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 1
.........................................................................................................................AAGCAAGCAAGCAGCAAGGCT............................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................AGCAGCAAGGCTGTCCTGTCTCGTGCGC............................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................GCAGAATACATCGAGAGAACATC...................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0
....CCAGCAAGCATACTATCGCCACAAC.............................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...GCCAGCAAGCATACTATCGCCACAACGAC........................................................................................................................................................................................................................... 29 0 1 1.00 1 0 0 0 0 0 1 0 0
.........................................................................................................................................AGGCTGTCCTGTCTCGTGCGCCTA.......................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................TAAATGCACAAAACGAGC........................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................CGAGTGTAGCAGAAGAACGCA.................................................................................................................................. 21 3 2 1.00 2 1 0 0 1 0 0 0 0
.................................................................................................................................AAGCAGCAAGGCTGTCCTGTCTCGTGC............................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................GCAAGCAGCAAGGCTGTCCTGTCC.................................................................................................... 24 1 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................AATACATCGAGAGAACATCGAGT.................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0 0
.........................................................................................CGAGAGAACATCGAGTATAGC............................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................ATGGGCCGCTTGTGTCTCT............. 19 0 1 1.00 1 0 0 1 0 0 0 0 0
............CATACTATCGCCACAACGACAACTGCT.................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................AGAATACATCGAGAGAACATCGA.................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0
..........................................................................................................................................GGCTGTCCTGTCTCGTGCGCCT........................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................AACGAGCAGAATACATCGAGA............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.............ATACTATCGCCACAACGA............................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................AGCAGCAAGGCTGTCCTGTCTCGTGCGCC............................................................................................ 29 0 1 1.00 1 0 0 0 0 0 1 0 0
...................................................................................................................................GCAGCAAGGCTGTCCTGTCTCGTGCGC............................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................GCTGTCCTGTCTCGTGCGCCT........................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................ATGGGCCGCTTGTGTCTCTACC.......... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.............ATACTATCGCCACAACGAC........................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................ATACATCGAGAGAACATCGAG................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0
.....................................................................................................................................AGCAAGGCTGTCCTGTCTCGTGCG.............................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................GTCCTGTCTCGTGCGCCTAC......................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................CAGAATACATCGAGAGAAC......................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
...........GCATACTATCGCCACAACGACAACTG...................................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................AGCAAGCAAGCAGCAAGGC.............................................................................................................. 19 1 3 0.33 1 0 1 0 0 0 0 0 0
.....................................................................................................GAGTGTAGCAGAAAAACGCTA................................................................................................................................. 21 3 4 0.25 1 1 0 0 0 0 0 0 0
....................................................................................................CGAGTGTAGCAGTAGAACGC................................................................................................................................... 20 3 4 0.25 1 0 0 0 1 0 0 0 0
.....................................................................................................GAGTGTAGCAGAAAAACGCT.................................................................................................................................. 20 3 8 0.13 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................CGCTGCCTGCCCAAAATGG............................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

GTTCGGTCGTTCGTATGATAGCGGTGTTGCTGTTGACGAATGTAAAGTGGATTACGATTACGATTTACGTGTTTTGCTCGTCTTATGTAGCTCTCTTGTAGCTCATATCGTCGTTTTGCGTTTTGTTCGTTCGTCGTTCCGACAGGACAGAGCACGCGGATGAAATTTTAATCTACATTTGAATTGCAAAGATGTAATGTCGGTTCAACAGACGGGTTTTACCCGGCGAACACAGAGATGGTTCCCACGTG
*********************************************************************************************.........................((.(((....(((..((.(((..........)))))..)))....)))))*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM343916
embryo
 M022
male body		 GSM444067
head
....................................................................................................GCTCACATCGTCTTCTTGCG................................................................................................................................... 20 3 4 31.75 127 126 1 0 0 0
.......CGCTCGTATGATAGGGGT.................................................................................................................................................................................................................................. 18 2 1 2.00 2 2 0 0 0 0
.......CGCTCGTATGATAGGGGTC................................................................................................................................................................................................................................. 19 3 6 1.50 9 8 1 0 0 0
.......CGCTCGTATGATAGGGGTCT................................................................................................................................................................................................................................ 20 3 2 1.50 3 2 1 0 0 0
........GTCAGTATGATAGCGCTGTT............................................................................................................................................................................................................................... 20 3 2 0.50 1 0 0 1 0 0
....................................................................................................GCTCACATCGTCTTTTTGCGA.................................................................................................................................. 21 3 4 0.25 1 1 0 0 0 0
.........CTCGTATGATAGGGGTCT................................................................................................................................................................................................................................ 18 3 20 0.20 4 2 0 0 2 0
......ACGCTCGTATGATAGGGGT.................................................................................................................................................................................................................................. 19 3 13 0.15 2 1 0 0 0 1
.......................................................................TTTTGCTCCTCTTTTATAGCT............................................................................................................................................................... 21 3 14 0.14 2 2 0 0 0 0
........GCTCGTATGATAGGGGTCT................................................................................................................................................................................................................................ 19 3 11 0.09 1 1 0 0 0 0
............................................................................................................................................GCCAGGACTTAGCACGCG............................................................................................. 18 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group8:1430165-1430415 - dps_3240 C-AA-GC----CAGCAAG-------CATACTATCGCCA---CAACGACAAC------------------TGCTTACATTTCACCTAATGC---TAATGCTAAATG------CA-------------C--AAAACGAGCAGAATA------C-ATCGAGAGA--ACATCGA-GT----------AT--------AGCAGCAAA-------------AC----GCA-------------AAACAAGCAAGCA----G--CAAGGC---------------------TGTCCTGTCTCGTGC---GCCTACTTTAAAATTAGATGTAAA-CTTAACG--TTTCTACATTACAGCCAAGTT-------GTCTGCCCAA-AAT-G--GGCCGC---TTGTGTCTCT------ACCAAGGGTGCAC
droPer2 scaffold_32:45174-45431 + C-AA-GC----CAGCAAG-------CATACTATCGCCA---CAACGACAAC------------------TGCTTACATTTCACCTAATGC---TAATGCTAAATG------CA-------------C--AAAACGAGCAGAATA------C-ATCGAGAGA--ACATCGA-GT----------AT--------AGCAGCAAA-------------AC----GCAAACAAGC------AAGCAAGCAAGCA----G--CAAGGC---------------------TGTCCTGTCTCGTGC---GCCTACTTTAAAATTAGATGTAAA-CTTAACG--TTTCTACATTACAGCCAAGTT-------GTCTGCCCAA-AAT-G--GGCCGC---TTGTGTCTCT------ACCAAGGGTGCAC
droWil2 scf2_1100000004762:137428-137478 + A-AA-GT----TAA-ATT-AACGC---TTCGACAACAA---CAACAACAAC------------------AACTTGCATGGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droVir3 scaffold_12963:12815174-12815201 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTACA-ATTAACG--TTTTTACATTACAG----------------------------------------------------------------------
droMoj3 scaffold_6500:7246064-7246270 - C-AA-----------------------TGCCAGCACCACAACAACAAAATGTATAACAAC---------TGCTCCCAGCTGCCTT----T---T------------------------------------------------GA------T-GGCCAATGC--GAGTCGA-GA------------------------GTCGAGTCCAGCCAAATAGCCTGCTGAATCACAG----A-T-ACAGATACAGATCCAA--GTAGAT---------------------CGTTTTGTACCT------------CG------------TACAATTTAACG--TTTTTACATTACAGAAACGTA-------AGCTGCACGA-TAT-T--GGG-----------------CAACG--------ACGAT
droGri2 scaffold_15074:2350978-2351018 - T-GA-AATCTCCTACAGT-AATGC-CA---CAGCACCA---CAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:2310233-2310507 - C-CT------------------------ACTAGTG------CAACGACAACTAC---------------CA-----TCCGCCCCTGCTGCTGCTGATGC-AGATGGAGCTGCAGCTGCCACTGCCACTGCCACTGTGAAT-----TGCAAC-GTCGAGCGACATCATCGA-GA----------GT------AAAGCAAGAGA-------------TC----GCAAGCACACGCATATGCATATGCT----GGCTGACAAACGGTGTCTGACTTATGACTCATGACGCCTTGTCGCCTGC---GCTGACTGTGTA---AGATGTGAA-CCTAACG--CTTTTACATTACAGCCGAGAG--T--T-GTCTGCCGATTG--AG--GGCTGC---C----------------------------
droBip1 scf7180000396390:157737-158024 - CTAGT-------------------GCGCGCCGCCGCCA---CAACGACAACTACGACATCTGCGACCCGCAGTTGTACCGCACCTGCTGC---TGATGC-AGATG------CA------GCTGCCACTGTGAATG-CCACAATATTGCCAT-GTCGAGCGACATCATCGA-GC----------AACATCGTAAAGCAAGAGA-------------TC----GCAAGCAC----------GCATGCA----AGCTGTCAAACGGTGT------A----CTC---TCGCCTTGTCGC-TGC---GCCGACTGTGTA---AGATGTGAA-CCTAACG--CTTTTACATTACAGCCGAGTT-------GTCTGCCGAT-G--AG--GGCTGCCGCTGGT---T------------GGGGTCTAC
droKik1 scf7180000302510:920535-920808 + C-AA-AGAACTAAGCGCC-------TGCGCCGCCACTG---CAACGACAAC------------------CGAACGAATTTT---TGCTGC---GGCTGCC-------------------ACAGCTACTGCGAACGAGCACA-TA------C-GTCGAGCAA--GCATCGT-GT----------AT--------AGCCGCAGA-------------AC----GAACGCACGA------ACACAAGCAAACAGGCAG--AGAAGG---------------------CGTCCCGTCGCCCGT---GCTGATTGTGTAAGAAGATGTAAA-CCTAACG--CTTTTACATTGCAGCCAAGTCAAGTCTCCCCTGCCGAT-GAG-GGGGTCTGC---TGGTGTCTAGCCCATC-----ACGTGGCA
droFic1 scf7180000454105:164778-164981 - T-AGA-------------------CCGTGGCGCCGCTA---CGACGACAAT------------------TAATTTCAGCTAAACTGCCAC---T---G-------------------------------T---CGAGCACTATA------CGGTCGTGTAA--ACATCAA-GT----------AT--------TTACACAGA-----------------------------------AAGCAAGCAAACAA--------ATGA---------------------CACCGCG-CGCTTGT---GCTGATTG------------TGAACCCTAATA--ATTTTACATTGCAGCCAAGTG-------TTCTGCCGGA-G--AG--GTCTGC---TGGTGTTTAACAAATC-----------AT
droEle1 scf7180000491249:125930-126136 - T-AGA-------------------GCGCAACGCCTCTA---CAACGACAAC------------------CAATTTAAGCTCACCTGCTAC---T---G-------------------------------CAAAAGAGCACAAAG------C-GTCCAGTCA--ACATCGA-GT----------AT--------TACCACAGA-----------------------------------AAGCATGCAACCA----G--AAACTG---------------------CGTCCCGCTGCTTGT---GCCGATTG------------TGAA-CCTAATG--TTTTTACATTACAGCCGAGAT-------TTCTGCCGAA-G--AG--GTCTGC---TGGTATCTATCTAACC------------A
droRho1 scf7180000762853:12750-12950 - T-AGA-------------------GCGCAACGCCGCTA---CAACGACAAC------------------CAATTTAAGCGTACCAG-------------------------------------------CGAACGAGAACAATA------C-GTCGAGTGA--ACATCGA-GT----------AT--------TACCACAGA-----------------------------------AAGCATGCAAACA----G--AAACGG---------------------CGTCCTGCCGCCTTT---GCTGATTG------------TGAA-CCTAATG--CTTTTACATTACAGCCGAGGT-------TTCTGCCGAA-G--AG--GTTAGC---TGGTGTCCGTCTAATC------------A
droBia1 scf7180000300910:119255-119455 - T-AGA-------------------GCGCACCGCCGCTA---CAACAATAAC------------------CAATTTAGGCGCACCCGCTAC---T---G-------------------------------CGAACGAGCACAATA------C-GTCGAGTAA--ACATCGA-GT----------AT--------AACCACAGA-----------------------------------AAGCATGGA--------G--AAACGG---------------------CGTCCTGTCGCCTTA---GCTGGTTA------------TGAA-TTTTATG--CTTTTACATTACAGCCAAGT--------CTCTGCCGAA-G--AG--GTCTGC---TGATGTCCACTTAAT-------------C
droTak1 scf7180000413899:9429-9657 - T-TA-G---------------------CA-----AGTA---CAACGACAAC------------------CAATTCTAGCGCACCTGCTAC---T---GCTA--CG------AA----------------CAAGCACGCACAATA------C-GTCGAGCGA--ACATCGA-GTATT-------AT--------AACCACAGA-----------------------------------AAGCGTTCAAACA----G--AAACGG--CCAAGCTG---------------CTGCCGCCTGTGCCGCTGACTC------------TGAA-CCTCACGAACCTTTACCTTACAGCCAAGTT--C--T-CGCTGCCGAG-AAGAG--GCCTGCTC-TGGTGTCCACTCAATC-------GCAAGC
droEug1 scf7180000409184:109988-110159 - A-AT--T----TAGAAAGTAG----CGCGAAGCCGCCA---CG------------------------------------TCACCTGTTGA---T---G-------------------------------CAAACGGTCACAATG------C-GT-----------ATCGA-GTGTTATCGAGCAT--------TA-----------------------------------------------------CA----A--AAACGG---------------------CGTCCTGCCGCCTGG---GCTGATTG------------TGAA-ACTTATG--TTTTTATATTACAGCGAAGTT-------CTCAGCCGTG-A--AG--GT-CGCTA-TGGAGT----------------------G
dm3 chr3L:228139-228314 + A-----------------------GCTCACCTGCGCTA---CAACGACAAC------------------CAATTCAATCGCACCTGCTTC---T---G-------------------------------CAAGCGATCACAATA------C-GTCAAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAACAA--------------CCAGGTTA-------ATG-------GCTTCCTCT---GCTGACTA------------TGAAACTATACG--CCTTTACATTGCAGCCAAGAA-------------------------GCCTCT---TAGTGCA---------------------T
droSim2 3l:198497-198669 + dsi_6475 A-----------------------GCTCACCTGCGCTA---CAACGACAAT------------------CAATTCAAGCGCACCTGCTTC---T---G-------------------------------CAAGCGAGCACAA--------C-GTCAAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAACAA--------------CCAGGTTA-------ATG-------GCTTCCTCT---GCTGACAA------------TGAA-CTTTACG--CCTTTACATTGCAGCCAAGAA-------------------------GCCTCT---TAGTGCA---------------------T
droSec2 scaffold_2:255932-256104 + A-----------------------GCTCACCTGCGCTA---CAACGACAAT------------------CAATTCAAGCGCACCTGCTTC---T---G-------------------------------CAAGCGAGCACAA--------C-GTCAAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAACAA--------------CCAGGTTA-------ATGGCAT-------CCTCT---GCTGACAA------------TGAA-CTTTACG--CCTTTACATTGCAGCCAAGAA-------------------------GCCTCT---TAGTGCA---------------------T
droYak3 3L:206626-206812 + A-----------------------GATCACCTGCGCTA---CAACGACAAC------------------CAATTCGAGCGCACCTGCTTC---T---G-------------------------------CAAGCGAGCACAATA------C-GTCAATTGA--GCATCGAAG------------------------CACAGA-----------------------------------AAGCAAGCCAACAA--------------CCAGGTTA---------------ATGCTCCCTGT---GCTGACAA------------TGAA-CCTTACG--CTTTTACATTGCAGCCAAGAA-------------------------GCCTCC---TAGTGCATGTTCAACTACC---------A
droEre2 scaffold_4784:216476-216647 + A-----------------------GCTCACCTGCGCTA---CAACGACAAC------------------CAATTCAAGCGCACCTGCTTC---T---G-------------------------------CAAGCCAGCACAATA------C-GTCAAATGA--GCATCGA-GC------------------------ACCGA-----------------------------------AAGCAAGCA-ACAA--------------CCAGGTTA---------------ATGCTCCCTGC---GCTGACAA------------TGAA-CTTTACG--CTTTTACATTGCAGCCAAGAA-------------------------GCCTTC---TAGTGCA----------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
C-AA-GC----CAGCAAG-------CATACTATCGCCA---CAACGACAAC------------------TGCTTACATTTCACCTAATGC---TAATGCTAAATG------CA-------------C--AAAACGAGCAGAATA------C-ATCGAGAGA--ACATCGA-GT----------AT--------AGCAGCAAA-------------AC----GCA-------------AAACAAGCAAGCA----G--CAAGGC---------------------TGTCCTGTCTCGTGC---GCCTACTTTAAAATTAGATGTAAA-CTTAACG--TTTCTACATTACAGCCAAGTT-------GTCTGCCCAA-AAT-G--GGCCGC---TTGTGTCTCT------ACCAAGGGTGCACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................ATA------C-ATCGAGAGA--ACATCGA-GT----------.............................................................................................................................................................................................................................................2213.0030110100000
....................................................................................................................................................................................................................................................................GGC---------------------TGTCCTGTCTCGTGC---GC....................................................................................................................2012.0020200000000
.............GCAAG-------CATACTATCGCCA---CA.........................................................................................................................................................................................................................................................................................................................................................................................2012.0020200000000
....................................................................................................................................................................................................................................................................................................CTCGTGC---GCCTACTTTAAAA.........................................................................................................2011.0010000100000
.....................................A---CAACGACAAC------------------TGCTTACA.......................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................TTCTACATTACAGCCAAGTT-------GTC.....................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................................TCCTGTCTCGTGC---GCCTAC................................................................................................................1911.0010000100000
.................................................................................................................................AAAACGAGCAGAATA------C-ATCGAGA.....................................................................................................................................................................................................................................................................2311.0010010000000
.........................................................................................................................................................................................................................................................A----G--CAAGGC---------------------TGTCCTGTCT..............................................................................................................................1811.0010100000000
...............................................CAAC------------------TGCTTACATTTCACCTAAT............................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................................................................................................................AACGAGCAGAATA------C-ATCGA.......................................................................................................................................................................................................................................................................1911.0010000000001
.....GC----CAGCAAG-------CATACTATCGCCA---CAAC.......................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
...........................................................................................................................................................GAGAGA--ACATCGA-GT----------AT--------AGCA...............................................................................................................................................................................................................................2111.0010010000000
......................................................................................................................................GAGCAGAATA------C-ATCGAGAGA--A................................................................................................................................................................................................................................................................2111.0010010000000
......................................................................................................................................GAGCAGAATA------C-ATCGAGAGA--AC...............................................................................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................................................A----G--CAAGGC---------------------TGTCCTGTCTCGTGC---GCCT..................................................................................................................2711.0010000100000
..............................................................................TTCACCTAATGC---TAATGCTAAAT............................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................ACATTACAGCCAAGTT-------GTCTGCCCAA-A............................................2711.0010100000000
.............................................................................................................................................................................................................................................................................................................................................G--TTTCTACATTACAGCCAAGTT-------GTCTGCC.................................................2911.0010100000000
..................................................................................................................................AAACGAGCAGAATA------C-ATCG........................................................................................................................................................................................................................................................................1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................TTCTACATTACAGCCAAGT................................................................1911.0010000010000
......................................................................................................................................................................................................................................................AGCA----G--CAAGGC---------------------TGTCCTGTCTCGTGC---GC....................................................................................................................2811.0010010000000
........................................................................................................................................GCAGAATA------C-ATCGAGAGA--ACATC............................................................................................................................................................................................................................................................2311.0010000100000
......C----CAGCAAG-------CATACTATCGCCA---CAAC.......................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.....GC----CAGCAAG-------CATACTATCGCCA---CAACGAC....................................................................................................................................................................................................................................................................................................................................................................................2911.0010001000000
...................................................................................................................................................................................................................................................................AGGC---------------------TGTCCTGTCTCGTGC---GCCTA.................................................................................................................2411.0010100000000
...................................................................................................TAAATG------CA-------------C--AAAACGAGC..........................................................................................................................................................................................................................................................................................1811.0010010000000
.....................................................................................................................................................................................................................................................AAGCA----G--CAAGGC---------------------TGTCCTGTCTCGTGC---......................................................................................................................2711.0010010000000
...................................................................................................................................................................................................................................................GCAAGCA----G--CAAGGC---------------------TGTCCTGTCC..............................................................................................................................2411.0010010000000
............................................................................................................................................AATA------C-ATCGAGAGA--ACATCGA-GT----------.............................................................................................................................................................................................................................................2311.0010010000000
..........................................................................................................................................................CGAGAGA--ACATCGA-GT----------AT--------AGC................................................................................................................................................................................................................................2111.0010000100000
........................................................................................................................................................................................................................................................................................................................................................................................AT-G--GGCCGC---TTGTGTCTCT------.............1911.0010000100000
.........................CATACTATCGCCA---CAACGACAAC------------------TGCT...........................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
..........................................................................................................................................AGAATA------C-ATCGAGAGA--ACATCGA-.........................................................................................................................................................................................................................................................2311.0010000100000
....................................................................................................................................................................................................................................................................GGC---------------------TGTCCTGTCTCGTGC---GCCT..................................................................................................................2211.0010100000000
...................................................................................................................................AACGAGCAGAATA------C-ATCGAGA.....................................................................................................................................................................................................................................................................2111.0010100000000
..........................ATACTATCGCCA---CAACGA.....................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
......................................................................................................................................................................................................................................................AGCA----G--CAAGGC---------------------TGTCCTGTCTCGTGC---GCC...................................................................................................................2911.0010001000000
.......................................................................................................................................................................................................................................................GCA----G--CAAGGC---------------------TGTCCTGTCTCGTGC---GC....................................................................................................................2711.0010100000000
.....................................................................................................................................................................................................................................................................GC---------------------TGTCCTGTCTCGTGC---GCCT..................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................AT-G--GGCCGC---TTGTGTCTCT------ACC..........2211.0010010000000
..........................ATACTATCGCCA---CAACGAC....................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
.............................................................................................................................................ATA------C-ATCGAGAGA--ACATCGA-G........................................................................................................................................................................................................................................................2111.0010000000001
.........................................................................................................................................................................................................................................................A----G--CAAGGC---------------------TGTCCTGTCTCGTGC---G.....................................................................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................................................GTCCTGTCTCGTGC---GCCTAC................................................................................................................2011.0010100000000
.........................................................................................................................................CAGAATA------C-ATCGAGAGA--AC...............................................................................................................................................................................................................................................................1911.0010100000000
.................G-------CATACTATCGCCA---CAACGACAAC------------------TG.............................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
droPer2
C-AA-GC----CAGCAAG-------CATACTATCGCCA---CAACGACAAC------------------TGCTTACATTTCACCTAATGC---TAATGCTAAATG------CA-------------C--AAAACGAGCAGAATA------C-ATCGAGAGA--ACATCGA-GT----------AT--------AGCAGCAAA-------------AC----GCAAACAAGC------AAGCAAGCAAGCA----G--CAAGGC---------------------TGTCCTGTCTCGTGC---GCCTACTTTAAAATTAGATGTAAA-CTTAACG--TTTCTACATTACAGCCAAGTT-------GTCTGCCCAA-AAT-G--GGCCGC---TTGTGTCTCT------ACCAAGGGTGCACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................ATACTATCGCCA---CAACGACAAC------------------TG.............................................................................................................................................................................................................................................................................................................................................................24110.00101000000
..........................ATACTATCGCCA---CAACGAC....................................................................................................................................................................................................................................................................................................................................................................................1917.007511000
.............................................................................................................................................ATA------C-ATCGAGAGA--ACATC............................................................................................................................................................................................................................................................1813.003300000
..........................ATACTATCGCCA---CAACGACAAC------------------TGCTTA.........................................................................................................................................................................................................................................................................................................................................................2812.002200000
.............................................................................................................................................ATA------C-ATCGAGAGA--ACATCGA-GT----------.............................................................................................................................................................................................................................................2212.002002000
......................................................................................................................................GAGCAGAATA------C-ATCGAGA.....................................................................................................................................................................................................................................................................1812.002200000
.....................................................................................................................................................................................................................................................................GC---------------------TGTCCTGTCTCGTGC---GC....................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................ACG--TTTCTACATTACAGCCAAGTT-------G.......................................................2511.001010000
..........................ATACTATCGCCA---CAACGACAAC------------------T..............................................................................................................................................................................................................................................................................................................................................................2311.001010000
................................TCGCCA---CAACGACAAC------------------TGCT...........................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................A----G--CAAGGC---------------------TGTCCTGTCTCGTG..........................................................................................................................2211.001100000
...........................TACTATCGCCA---CAACGACAAC------------------TG.............................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................................................AAGGC---------------------TGTCCTGTCTCGTGC---GC....................................................................................................................2211.001010000
..............................................................................................................................................................................................................................................................G--CAAGGC---------------------TGTCCTGTCTCGTGC---GCCTA.................................................................................................................2711.001010000
..................................................................................................................................................................................................................................................................AAGGC---------------------TGTCCTGTCTCGTG..........................................................................................................................1911.001010000
.................................................................................................................................................................................................................................................................................................................................................TTCTACATTACAGCCAAGTT-------GTCTGC..................................................2611.001001000
........................................................................................................................................GCAGAATA------C-ATCGAGAGA--ACATCGA-.........................................................................................................................................................................................................................................................2511.001000001
.............................................................................................TAATGCTAAATG------CA-------------C--AAAACGAGCAGA.......................................................................................................................................................................................................................................................................................2711.001010000
......................................................................................................................................................................................................................................................................C---------------------TGTCCTGTCTCGTGC---GCCT..................................................................................................................2011.001010000
.......................................................................................................................................................................................................................................................................................................................AAAATTAGATGTAAA-CTTAAC.......................................................................................2111.001010000
...........................................................................................................................................................GAGAGA--ACATCGA-GT----------AT--------AGCAGCAAA-------------AC----G......................................................................................................................................................................................................2911.001000001
.................................................................................................................................................................................................................................................................................................................................................................................CCCAA-AAT-G--GGCCGC---TTGTGT.......................2111.001010000
...............................................................................................................................................................................................................................................GCAAGCAAGCA----G--CAAGGC---------------------T.......................................................................................................................................1911.001010000
.........................................................................................................................................CAGAATA------C-ATCGAGAGA--A................................................................................................................................................................................................................................................................1811.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTCTCT------ACCAAGGGTG...2011.001010000
..............CAAG-------CATACTATCGCCA---CAACGA.....................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.........................................................................................................................................................................................................................................................A----G--CAAGGC---------------------TGTCCTGTCTCGTGC---GCCT..................................................................................................................2711.001100000
.................................................................................................................................................................................................................................ACAAGC------AAGCAAGCAAGCA----G--CAAG...............................................................................................................................................................2411.001000010
................................................................................................................................................................................................................................................................................................CTGTCTCGTGC---GCCTACTTTAA...........................................................................................................2211.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................GTCTCT------ACCAAGGGTGCAC1911.001010000
.................................................................................................................................................................................................................................................................................................................TACTTTAAAATTAGATGTAAA-.............................................................................................2111.001010000
...............................................................................................................................................................................................................................AAACAAGC------AAGCAAGCAAGC...........................................................................................................................................................................2040.251010000
droWil2
A-AA-GT----TAA-ATT-AACGC---TTCGACAACAA---CAACAACAAC------------------AACTTGCATGGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................CGACAACAA---CAACAACAAC------------------AACTTGCA.......................................................................................................................................................................................................................................................................................................................................................2711.00101000
droVir3
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTACA-ATTAACG--TTTTTACATTACAG----------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................GTACA-ATTAACG--TTTTTACATT..........................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
C-AA-----------------------TGCCAGCACCACAACAACAAAATGTATAACAAC---------TGCTCCCAGCTGCCTT----T---T------------------------------------------------GA------T-GGCCAATGC--GAGTCGA-GA------------------------GTCGAGTCCAGCCAAATAGCCTGCTGAATCACAG----A-T-ACAGATACAGATCCAA--GTAGAT---------------------CGTTTTGTACCT------------CG------------TACAATTTAACG--TTTTTACATTACAGAAACGTA-------AGCTGCACGA-TAT-T--GGG-----------------CAACG--------ACGATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................GTACCT------------CG------------TACAATTTAACG--T...................................................................................2116.006600000
....................................................................................................................................................................................................................................................................................................ACCT------------CG------------TACAATTTAACG--T...................................................................................1915.005301001
..................................................................................................................................................................................................................................................................................................GTACCT------------CG------------TACAATTTAACG--TT..................................................................................2214.004400000
......................................................................................................................................................................................................................AGCCTGCTGAATCACAG----A-T-ACA..................................................................................................................................................................................2212.002200000
.............................................................................................T------------------------------------------------GA------T-GGCCAATGC--GAGTCGA-GA------------------------GTCGAG.........................................................................................................................................................................................................................2812.002200000
...................................................................................................................................................................................................................................................................................................................................................TTACATTACAGAAACGTA-------AGCTGCACG...............................................2712.002200000
.....................................................................................................................................................................................................................................AG----A-T-ACAGATACAGATCCAA--GTAGAT---------------------CG......................................................................................................................................2811.001001000
........................................................................................................................................................................................................................................................................................................................................................TTACAGAAACGTA-------AGCTGCACGA-TA...........................................2511.001100000
.................................................................................................................................................................................................................................................................................................................................................TTTTACATTACAGAAACGTA-------AGCTGC..................................................2611.001100000
......................................................................................................................................................................................................................................................................................................................................ATTTAACG--TTTTTACATTACA.......................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................................TTTTACATTACAGAAACGTA-------AGCTGCAC................................................2811.001100000
...............................................................................................................................................................................................................GCCAAATAGCCTGCTGAATCACAG----A-T-.....................................................................................................................................................................................2611.001000010
..................................................................................................................................................................................................................................................GATACAGATCCAA--GTAGAT---------------------CGTTT...................................................................................................................................2411.001100000
...................................................................................................................................................................................................................................................................................................................................................TTACATTACAGAAACGTA-------AGCTGCACGA-T............................................2911.001100000
...............................AGCACCACAACAACAAAATGT................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................CAGATACAGATCCAA--GTAGAT---------------------CGTTTTGT................................................................................................................................2911.001000001
.................................................................................................................................................................................................................................TCACAG----A-T-ACAGATACAGATC........................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................ATAGCCTGCTGAATCACAG----A-T-ACAG.................................................................................................................................................................................2511.001100000
.............................................................................................................................................................ATGC--GAGTCGA-GA------------------------GTCGAGTCCAGCC..................................................................................................................................................................................................................2611.001000100
...............................................................................................................................................................................................................................................................................................................................................................................TGCACGA-TAT-T--GGG-----------------CAACG--------A....2011.001100000
.........................................................................................................................................................................................................................................................................................................................................................TACAGAAACGTA-------AGCTGCACGA-T............................................2311.001100000
..............................................................................................................................................................TGC--GAGTCGA-GA------------------------GTCGAGTCCAGCCA.................................................................................................................................................................................................................2611.001100000
.........................................................................................T---T------------------------------------------------GA------T-GGCCAATGC--GAGTCGA-G........................................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................TTACAGAAACGTA-------AGCTGCACGA-.............................................2311.001000010
..................................................GTATAACAAC---------TGCTCCCAGCTGCCTT----T---T------------------------------------------------G.....................................................................................................................................................................................................................................................................................2911.001100000
...............................................................................................................................................A------T-GGCCAATGC--GAGTCGA-GA------------------------GTCGA..........................................................................................................................................................................................................................2511.001000001
................................................ATGTATAACAAC---------TGCTCCCAGC.....................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................ATACAGATCCAA--GTAGAT---------------------CGTT....................................................................................................................................2211.001100000
............................................................................................................................................................................................................................................................CAA--GTAGAT---------------------CGTTTTGTACCT------------CG------------TACA..............................................................................................2711.001100000
..............................................................................................................................................GA------T-GGCCAATGC--GAGTCGA-G........................................................................................................................................................................................................................................................2011.001100000
...................................CCACAACAACAAAATGTATAAC...........................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.................................................................................................................................................................................................................................................................................................TGTACCT------------CG------------TACAATTTAACG--T...................................................................................2211.001100000
......................................................................................................................................................................TCGA-GA------------------------GTCGAGTCCAGCCAAATAGCC..........................................................................................................................................................................................................2711.001100000
.............................................................................................T------------------------------------------------GA------T-GGCCAATGC--GAGTCGA-GA------------------------GTT............................................................................................................................................................................................................................2511.001000001
.............................................................................................................................................................ATGC--GAGTCGA-GA------------------------GTCGAGTCCAGC...................................................................................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................................................AGATACAGATCCAA--GTAGAT---------------------C.......................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................A-------AGCTGCACGA-TAT-T--GGG-----------------CAA...............2111.001100000
.............................................................................GCTGCCTT----T---T------------------------------------------------GA------T-GGCCAATGC--GAGTC............................................................................................................................................................................................................................................................2711.001000010
..................................................................................................................................................................................................................................................................................................................................................................................ACGA-TAT-T--GGG-----------------CAACG--------ACGAT2111.001100000
.............................................................................................................................................................................................................................................T-ACAGATACAGATCCAA--GTAGAT---------------------CGTTT...................................................................................................................................2811.001100000
........................................................................................................................................................GGCCAATGC--GAGTCGA-GA------------------------GTCGAGTCCA.....................................................................................................................................................................................................................2811.001000001
.............................................................................................T------------------------------------------------GA------T-GGCCAATGC--GAGTCGA-GA------------------------GTCGA..........................................................................................................................................................................................................................2711.001100000
........................................................................................................................................................................................................................................................................................................................................TTAACG--TTTTTACATTACAGAAACGTA-------A.......................................................2811.001100000
.......................................................................................................................................................................CGA-GA------------------------GTCGAGTCCAGCCAAAT..............................................................................................................................................................................................................2211.001100000
...........................................................................................................................................................................................................................................................CCAA--GTAGAT---------------------CGTTTTGTACCT------------CG------------TACA..............................................................................................2811.001100000
................................................................................................................................................................................................................................ATCACAG----A-T-ACAGATACAGAT.........................................................................................................................................................................2111.001100000
........................................................CAAC---------TGCTCCCAGCTGCC.................................................................................................................................................................................................................................................................................................................................................1811.001000010
.................................................................................................................................................................................................................................................................GTAGAT---------------------CGTTTTGTACCT------------CG------------..................................................................................................2011.001100000
.........................................................................................T---T------------------------------------------------GA------T-GGCCAATGC--GAGTC............................................................................................................................................................................................................................................................1911.001100000
..........................................................................................................................................................................................................................................................TCCAA--GTAGAT---------------------CGTTTTGTACCT------------C...............................................................................................................2411.001000010
......................................................................................................................................................T-GGCCAATGC--GAGTCGA-GA------------------------GT.............................................................................................................................................................................................................................2111.001000001
...................................................................................................................................................................................................................................................ATACAGATCCAA--GTAGAT---------------------CGTTTT..................................................................................................................................2411.001000001
..........................................................................................................................................................................................................................................................................................................................................................ACAGAAACGTA-------AGCTGCACGA-TAT-.........................................2411.001100000
.....................................................TAACAAC---------TGCTCCCAGCTGCC.................................................................................................................................................................................................................................................................................................................................................2111.001000010
....................................................................................................................................................................................................................................................................................................ACCT------------CG------------TACAATTTAACG--TT..................................................................................2011.001000001
.............................................................................................................................................................................................................................................T-ACAGATACAGATCCAA--GTAGAT---------------------CGTT....................................................................................................................................2711.001000001
...............................................................................................................................................................................................................................................................................................................................................................AACGTA-------AGCTGCACGA-TAT-T--GGG-----------------C.................2411.001100000
............................................................................................................................................................AATGC--GAGTCGA-GA------------------------GTCGA..........................................................................................................................................................................................................................1911.001000001
................................................................................................................................................................................................................................................CAGATACAGATCCAA--GTAGAT---------------------CGTTT...................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................A-T-ACAGATACAGATCCAA--GTAGAT---------------------CGT.....................................................................................................................................2711.001000001
...........................................................C---------TGCTCCCAGCTGCCTT----T---T------------------------------------------------GA------T-GGCC........................................................................................................................................................................................................................................................................2611.001000010
...................................................................................................................................................................................................................................ACAG----A-T-ACAGATACAGATC........................................................................................................................................................................19120.081100000
droGri2
T-GA-AATCTCCTACAGT-AATGC-CA---CAGCACCA---CAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
C-CT------------------------ACTAGTG------CAACGACAACTAC---------------CA-----TCCGCCCCTGCTGCTGCTGATGC-AGATGGAGCTGCAGCTGCCACTGCCACTGCCACTGTGAAT-----TGCAAC-GTCGAGCGACATCATCGA-GA----------GT------AAAGCAAGAGA-------------TC----GCAAGCACACGCATATGCATATGCT----GGCTGACAAACGGTGTCTGACTTATGACTCATGACGCCTTGTCGCCTGC---GCTGACTGTGTA---AGATGTGAA-CCTAACG--CTTTTACATTACAGCCGAGAG--T--T-GTCTGCCGATTG--AG--GGCTGC---C----------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................CTGACTTATGACTCATGACGCCTTGTCGC.............................................................................................................................29110.00100100000
.......................................................................................................................................................................................................................................................................................................CTGC---GCTGACTGTGTA---AGATGT.................................................................................................2219.009110070
.................................................................................................................................................................................................................................................................AAACGGTGTCTGACTTATGACTCATGAC.......................................................................................................................................2818.008350000
..............................................................................................................................................................................................................................................CATATGCT----GGCTGACAAACGGTGT..........................................................................................................................................................2416.006300030
..........................................................................................................................................................................................................................................................................CTGACTTATGACTCATGACGCCTTGT................................................................................................................................2616.006240000
.............................................................................................................................................................................................................................................GCATATGCT----GGCTGACAAACGGTGT..........................................................................................................................................................2513.003001011
..............................................................................................................................................................................................................................................CATATGCT----GGCTGACAAAC...............................................................................................................................................................1913.003030000
.......................................................................................................................................................................................................................................................................................................CTGC---GCTGACTGTGTA---AGATGTGAA-CC...........................................................................................2713.003000030
...............................................................................................................................................................................................AAAGCAAGAGA-------------TC----GCAAGC.................................................................................................................................................................................................1913.003020010
..................................................................................................................................................................................................GCAAGAGA-------------TC----GCAAGCACACGCATATG......................................................................................................................................................................................2712.002010010
.........................................................................................................................................................................................................................................ATATGCATATGCT----GGCTGAC...................................................................................................................................................................2012.002000002
.......................................................................................................................................................................................................................................................................................................CTGC---GCTGACTGTGTA---AGATGTGA...............................................................................................2412.002000020
..................................................................................................................................................................................................GCAAGAGA-------------TC----GCAAGCACACGC...........................................................................................................................................................................................2212.002010010
.........................................................................................................................................................................................................................................................................................................GC---GCTGACTGTGTA---AGATGT.................................................................................................2012.002001010
...........................................................................................GCTGATGC-AGATGGAGCTGC....................................................................................................................................................................................................................................................................................................................2012.002010010
.......................................................................................................................................................................................................................................................................................................................GTA---AGATGTGAA-CCTAACG--CT..................................................................................2112.002010010
........................................................................................................................................................................................................................................................................................................TGC---GCTGACTGTGTA---AGATGT.................................................................................................2112.002000002
......................................................................A-----TCCGCCCCTGCTGCTGCTGA....................................................................................................................................................................................................................................................................................................................................2112.002110000
...............................................................................................................................................................................................AAAGCAAGAGA-------------TC----GCAAGCACACGC...........................................................................................................................................................................................2512.002010010
.......................................................................................................................................................................................................................................................................................................CTGC---GCTGACTGTGTA---AGAT...................................................................................................2012.002000020
..............................................................................................................................................................................................................................................CATATGCT----GGCTGACAAACGGTG...........................................................................................................................................................2312.002100010
..................................................................................................................................................................................................GCAAGAGA-------------TC----GCAAGCACACGCATATGC.....................................................................................................................................................................................2812.002100010
...........................................................................................................................................................................................................................................ATGCATATGCT----GGCTGACAAACGGTGT..........................................................................................................................................................2712.002011000
.......................................................................................................................................................................................................................................GCATATGCATATGCT----GGCTGAC...................................................................................................................................................................2212.002020000
...........................................................................................................................................................................................................................................................................TGACTTATGACTCATGACGCCTTGTCGC.............................................................................................................................2812.002110000
.....................................................................................................................................................................................................................................ACGCATATGCATATGCT----GGCTGAC...................................................................................................................................................................2412.002110000
...................................................................................................................................................................................................................................................................................................................................GAA-CCTAACG--CTTTTACATTACAGCC....................................................................2612.002020000
..........................................................................................................................................................................................................................................................................CTGACTTATGACTCATGAC.......................................................................................................................................1912.002020000
......................................................................................................................................................................................................................................................................................................................................................CATTACAGCCGAGAG--T--T-GTCTGC..................................................2312.002020000
....................................................................................................AGATGGAGCTGCAGCTGCCACTGCC.......................................................................................................................................................................................................................................................................................................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................CGAGAG--T--T-GTCTGCCGATTG--AG--GGCT..................................2611.001010000
......................................................................................................................................................................................................................................................................................................CCTGC---GCTGACTGTGTA---AGAT...................................................................................................2111.001000001
..........................................................................................................................................................................................................................................TATGCATATGCT----GGCTGAC...................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................GACTTATGACTCATGACGCCTTGT................................................................................................................................2411.001100000
..............................................................................................................................................................................................................................................................................CTTATGACTCATGACGCCTTGTCGCC............................................................................................................................2611.001010000
.......................................................................................................................ACTGCCACTGCCACTGTGA..........................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................ATGCATATGCT----GGCTGACAAACGG.............................................................................................................................................................2411.001010000
...............................................................................................................................................................................................AAAGCAAGAGA-------------TC----GCAAGCACAC.............................................................................................................................................................................................2311.001010000
.......................................................................................................................................................................................GT------AAAGCAAGAGA-------------TC----GCAAGCACAC.............................................................................................................................................................................................2511.001010000
..........................................................................................................................................................................................................................................................................................GACGCCTTGTCGCCTGC---GCT...................................................................................................................2011.001100000
......................................................................................................................................GTGAAT-----TGCAAC-GTCGAGCGACA.................................................................................................................................................................................................................................................................2311.001000010
....................................................................................................................................................................................................................................................................................................................TGTGTA---AGATGTGAA-CCTAACG--C...................................................................................2311.001000100
.......................................................................................................................................................................................................................................................................................................CTGC---GCTGACTGTGTA---AGA....................................................................................................1911.001001000
................................................................................................................AGCTGCCACTGCCACTGCCACTGT............................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................................................CACTGTGAAT-----TGCAAC-GTCGAGCGA...................................................................................................................................................................................................................................................................2511.001100000
..............................................................................................................................................................................................................................................................................CTTATGACTCATGACGCCTTGTCGCCT...........................................................................................................................2711.001010000
.........................................................................................................................................................................................................................................................................TCTGACTTATGACTCATGACGCCTTGT................................................................................................................................2711.001010000
....................................................................................................................................................................................................................................................................................ACTCATGACGCCTTGTCGCCT...........................................................................................................................2111.001000001
.......................................................................................................................................................................................GT------AAAGCAAGAGA-------------TC----GCAAGCACACGC...........................................................................................................................................................................................2711.001010000
.......................................................................................................................................................................................................................................................................................................................GTA---AGATGTGAA-CCTAACG--CTTTTA..............................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................GACGCCTTGTCGCCTGC---GCTGACTGT.............................................................................................................2611.001010000
.....................................................................................................................................................................................................................................................................................................GCCTGC---GCTGACTGTGTA---AGA....................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................GACTTATGACTCATGACGC.....................................................................................................................................1911.001010000
..........................................................................................................................................AT-----TGCAAC-GTCGAGCGACATCATCGA-GA----------.............................................................................................................................................................................................................................................2811.001001000
..............................................................................................................................................................................................................................................CATATGCT----GGCTGACAAACGGTGTCT........................................................................................................................................................2611.001100000
.................................................................................................................................................................CATCATCGA-GA----------GT------AAAGCAAGA............................................................................................................................................................................................................................2211.001100000
................................................................................................................................................................................................................................................................................................................................................................GAGAG--T--T-GTCTGCCGATTG--AG--GGC...................................2411.001000010
.................................................................................................................GCTGCCACTGCCACTGCCACTGTGA..........................................................................................................................................................................................................................................................................................2511.001100000
............................................................................................................................................................................................................................................................................GACTTATGACTCATGACGCCTTGTCGC.............................................................................................................................2711.001010000
....................................................................................................................................................................................................................................................................................ACTCATGACGCCTTGTCGCCTGC---GC....................................................................................................................2511.001000001
................................................................................................................................................................ACATCATCGA-GA----------GT------AAAGCAAGAG...........................................................................................................................................................................................................................2411.001000010
.................................................................................................................................................TGCAAC-GTCGAGCGACATCATCGA-GA----------G............................................................................................................................................................................................................................................2711.001000010
........................................................................................................................................................................................................................................................................................................TGC---GCTGACTGTGTA---AGATGTGAA-CC...........................................................................................2611.001100000
..................................................................................................................................................................................................GCAAGAGA-------------TC----GCAAGCACACGCAT.........................................................................................................................................................................................2411.001000010
..................................................................................................................................................................................................GCAAGAGA-------------TC----GCAAGCACACGCATAT.......................................................................................................................................................................................2611.001000010
........................................................................................................................................................GTCGAGCGACATCATCGA-GA----------GT------.....................................................................................................................................................................................................................................2211.001000010
..........................................................................................................................................................................................................................................................................................................................................AACG--CTTTTACATTACAGCCGAGAG--T--T-........................................................2711.001010000
.............................................................................................................................................................................................................................................GCATATGCT----GGCTGACAAAC...............................................................................................................................................................2011.001010000
...................................................................................................................................................................................................................................................................................................................................................TTACATTACAGCCGAGAG--T--T-........................................................2011.001000010
..................................................................................................................................................................................................GCAAGAGA-------------TC----GCAAGCACACGCATA........................................................................................................................................................................................2511.001000010
.......................................................................................................................................................................................................................................................................................CATGACGCCTTGTCGCCTGC---GCTG..................................................................................................................2411.001100000
.....................................................................................................GATGGAGCTGCAGCTGCCACTGC........................................................................................................................................................................................................................................................................................................2311.001010000
.............................................................................................................................................................GCGACATCATCGA-GA----------GT------AAAGC................................................................................................................................................................................................................................2211.001000010
..........................................................................................................................................................................................................................................................................................................C---GCTGACTGTGTA---AGATGT.................................................................................................1911.001000010
.......................................................................................................................................................................................................................................................................................................................GTA---AGATGTGAA-CCTAACG--CTT.................................................................................2211.001100000
............................................................................................................................................................................................................................................................................................CGCCTTGTCGCCTGC---GCTGACT...............................................................................................................2211.001100000
.................................................................................................................................................................................................AGCAAGAGA-------------TC----GCAAGCACAC.............................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................C---GCTGACTGTGTA---AGATGTGAA-CCTA.........................................................................................2611.001100000
................................................................................................................................................................................................................................................................................................................................................................GAGAG--T--T-GTCTGCCGATTG--AG--GGCTGC---.............................2711.001000001
..................................................................................................................................................................................................................................................................AACGGTGTCTGACTTATGACTCATGAC.......................................................................................................................................2711.001010000
.............................................................................................................................................................................................................................................GCATATGCT----GGCTGACAAACGG.............................................................................................................................................................2211.001100000
................................................................................................................................................................................................................................................................................................................................................................GAGAG--T--T-GTCTGCCGATTG--AG--GGCT..................................2511.001000010
.............................................GACAACTAC---------------CA-----TCCGCCCCTGCTGCT.........................................................................................................................................................................................................................................................................................................................................2611.001100000
.................................................................................................................................................................................................................................................................AAACGGTGTCTGACTTATGACT.............................................................................................................................................2211.001010000
................................................................................................................................................................................................AAGCAAGAGA-------------TC----GCAAGCACAC.............................................................................................................................................................................................2211.001100000
............................................................................................................................................................AGCGACATCATCGA-GA----------GT------AAAGCAA..............................................................................................................................................................................................................................2511.001100000
........................................................................................GCTGCTGATGC-AGATGGAGCTGC....................................................................................................................................................................................................................................................................................................................2311.001010000
...................................................TAC---------------CA-----TCCGCCCCTGCTGCTGC.......................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................................................................CACGCATATGCATATGCT----GGCTGAC...................................................................................................................................................................2511.001010000
....................................................................................................................................................................................................................................................................................................CGCCTGC---GCTGACTGTGTA---AGATGT.................................................................................................2511.001001000
.......................................................................................................................................................................................................................................................................................................CTGC---GCTGACTGTGTA---AGATGTG................................................................................................2311.001100000
.......................................................................................................................................................................................................................................................................................................CTGC---GCTGACTGTGTA---AGATGC.................................................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................GCCTTGTCGCCTGC---GCTGACTGTGT...........................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................CTGACTTATGACTCATGACGCCTTGTC...............................................................................................................................2711.001010000
....................................................................................................................................................................................................................................................................................................................................................................G--T--T-GTCTGCCGATTG--AG--GGCT..................................2111.001000010
............................................................................................................................................................................................................................................................................GACTTATGACTCATGACGCCTTGTCGCC............................................................................................................................2811.001010000
..........................................................................................................................................................................................................................................TATGCATATGCT----GGCTGACAAACGGTGT..........................................................................................................................................................2811.001100000
...................................................................................................................................................................................................................................................GCT----GGCTGACAAACGGTGTC.........................................................................................................................................................2011.001000010
.......................................................................................................................................................................................................................................................................................................................GTA---AGATGTGAA-CCTAACG--C...................................................................................2011.001010000
..............................................................................................................................................................................................................................................CATATGCT----GGCTGACAAACGGTGTCC........................................................................................................................................................2611.001010000
......................................................................................................................................GTGAAT-----TGCAAC-GTCGAGC.....................................................................................................................................................................................................................................................................1911.001000010
.........................................................................................................................................................................................................................................................................TCTGACTTATGACTCATGAC.......................................................................................................................................2011.001010000
.........................................................................................................................TGCCACTGCCACTGTGAAT-----TGCAAC-G...........................................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................................................................................................................................................................GCCTTGTCGCCTGC---GCTGACTGT.............................................................................................................2311.001010000
.............................................................................................................................................................................................................................................GCATATGCT----GGCTGACAAACGGTGC..........................................................................................................................................................2511.001010000
.....................................................................................................................................................................................................................................................................................CTCATGACGCCTTGTCGCCTGC---GCTGA.................................................................................................................2711.001100000
............................ACTAGTG------CAACGACAACTAC---------------CA-----TCC.....................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................................................................................................................................................................................................................................................GTCGCCTGC---GCTGACTGT.............................................................................................................1811.001100000
................................................AACTAC---------------CA-----TCCGCCCCTGCTGCTGC.......................................................................................................................................................................................................................................................................................................................................2511.001100000
.............................................................................................................................................................................................................................................................................................................................................................GCCGAGAG--T--T-GTCTGCCGATTG--A.........................................2311.001000010
.....................................................................................................................................................................................................................................................................GGTGTCTGACTTATGACTCATGACGCC....................................................................................................................................2711.001010000
.............................CTAGTG------CAACGACAACTAC---------------CA-----TCCGC...................................................................................................................................................................................................................................................................................................................................................2611.001010000
................................................................................................................................................................................................................................................TATGCT----GGCTGACAAACGGTGTCT........................................................................................................................................................2411.001000010
.................................................................................................................................................................................................AGCAAGAGA-------------TC----GCAAGCACACGCATATG......................................................................................................................................................................................2811.001010000
.......................................................................................TGCTGCTGATGC-AGATGGAGCTGCAG..................................................................................................................................................................................................................................................................................................................2611.001100000
.......................................................................................................................................................................................................................................................................................................................................................ATTACAGCCGAGAG--T--T-GTCTGCCGATT.............................................2711.001100000
..CT------------------------ACTAGTG------CAACGACAA..................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
....................................................................................................................................................................................................................................................................................................................................................................G--T--T-GTCTGCCGATTG--AG--G.....................................1811.001100000
.........................................................................................................................................................................................................................................................................TCTGACTTATGACTCATGACGCCTTGTC...............................................................................................................................2811.001010000
..................................................................................................................................................................................................GCAAGAGA-------------TC----GCAAGCACAC.............................................................................................................................................................................................2011.001010000
................................................................................................................................................................................................AAGCAAGAGA-------------TC----GCAAGCACACGC...........................................................................................................................................................................................2411.001010000
..........................................................................................................................................................................................................................................................................CTGACTTATGACTCATGACGC.....................................................................................................................................2111.001010000
.........................................................................................................................................................................................................................................ATATGCATATGCT----GGCTGACAAAC...............................................................................................................................................................2411.001010000
.................................................................................................................................................................................................................................................................AAACGGTGTCTGACTTATGACTCA...........................................................................................................................................2411.001001000
...................................................................................................................................................CAAC-GTCGAGCGACATCATCGA-GA----------GT------.....................................................................................................................................................................................................................................2611.001100000
.................................................................................................................................................................................................................................................................................ATGACTCATGACGCCTTGT................................................................................................................................1911.001001000
......................................................................................................................................................C-GTCGAGCGACATCATCGA-GA----------.............................................................................................................................................................................................................................................2111.001000010
..................................................................................................................................CACTGTGAAT-----TGCAAC-GTCGAGCGACA.................................................................................................................................................................................................................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................TTACATTACAGCCGAGAG--T--T-GTCTGCC.................................................2711.001010000
...........................................................................................................................................................................GA----------GT------AAAGCAAGAGA-------------TC----GCAAGCAC...............................................................................................................................................................................................2511.001010000
.............................................................................................................................................................................................................................................................................................GCCTTGTCGCCTGC---GCTGAC................................................................................................................2011.001010000
...................................................................................................................................................................................................................................ACACGCATATGCATATGCT----GGCTGAC...................................................................................................................................................................2611.001010000
................................................................................................................................................................................................................................................................................................................................................CTTTTACATTACAGCCGAGAG--T--T-........................................................2311.001010000
.....................................................................................................................................................................................................................................................................................................................GTGTA---AGATGTGAA-CCTAACG--CTT.................................................................................2411.001010000
.....................................................................................................................................................................................................................................................................................................................GTGTA---AGATGTGAA-CCTAACG--C...................................................................................2211.001010000
...................................................................................................................................................................................................................................................................................................................................................................AG--T--T-GTCTGCCGATTG--AG--G.....................................1911.001010000
..............................................................................................................................................................................................................................................CATATGCT----GGCTGACAAACGGTGTC.........................................................................................................................................................2511.001000010
.................................................................................................................................................................................................................................................ATGCT----GGCTGACAAACGGTGTCT........................................................................................................................................................2311.001000010
.................................................ACTAC---------------CA-----TCCGCCCCTGCTGCTGCTGA....................................................................................................................................................................................................................................................................................................................................2711.001000001
..........................................................................................................................................................................................................................................................................................................C---GCTGACTGTGTA---AGATGTG................................................................................................2011.001000010
.......................................................................................................................................................................................................................................................................................................CTGC---GCTGACTGTGTA---AGATGTGAA-C............................................................................................2611.001000010
..........................................................................................................................................................................................................................................................................................GACGCCTTGTCGCCTGC---GCTGACT...............................................................................................................2411.001100000
.........................................................................................................................................................................................................................................................................TCTGACTTATGACTCATGACGCCTTGC................................................................................................................................2711.001010000
..................................G------CAACGACAACTAC---------------CA-----TCCGCCC.................................................................................................................................................................................................................................................................................................................................................2311.001010000
......................................................................................................ATGGAGCTGCAGCTGCCACTGCCACTGC..................................................................................................................................................................................................................................................................................................2811.001000001
................................................................................................................................................................................................AAGCAAGAGA-------------TC----GCAAGCACACGCA..........................................................................................................................................................................................2511.001100000
..............................TAGTG------CAACGACAACTAC---------------CA-----TCC.....................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................AGAGA-------------TC----GCAAGCACACGCAT.........................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................AACG--CTTTTACATTACAGCCGAGA................................................................2411.001100000
................................................................................................................................GCCACTGTGAAT-----TGCAAC-GTCGAGC.....................................................................................................................................................................................................................................................................2511.001100000
............................................................................................................................................................................................................................................................................GACTTATGACTCATGACGCCTT..................................................................................................................................2211.001100000
............................................................................................................................................................................................................................................................................................................................................................AGCCGAGAG--T--T-GTCTGCCGATTG--AG--GGC...................................2811.001000010
..........................................................................................................AGCTGCAGCTGCCACTGCC.......................................................................................................................................................................................................................................................................................................1920.501100000
.............................................................................CCGCCCCTGCTGCTGCTGAC...................................................................................................................................................................................................................................................................................................................................2020.501010000
..............................................................................................................GCAGCTGCCACTGCCACTGCC.................................................................................................................................................................................................................................................................................................2130.331010000
................................................................................................................AGCTGCCACTGCCACTGCCACTG.............................................................................................................................................................................................................................................................................................2350.201100000
.................................................................................................................................................................................................AGCAAGAGA-------------TC----GCAAGAC................................................................................................................................................................................................1880.131000100
droBip1
CTAGT-------------------GCGCGCCGCCGCCA---CAACGACAACTACGACATCTGCGACCCGCAGTTGTACCGCACCTGCTGC---TGATGC-AGATG------CA------GCTGCCACTGTGAATG-CCACAATATTGCCAT-GTCGAGCGACATCATCGA-GC----------AACATCGTAAAGCAAGAGA-------------TC----GCAAGCAC----------GCATGCA----AGCTGTCAAACGGTGT------A----CTC---TCGCCTTGTCGC-TGC---GCCGACTGTGTA---AGATGTGAA-CCTAACG--CTTTTACATTACAGCCGAGTT-------GTCTGCCGAT-G--AG--GGCTGCCGCTGGT---T------------GGGGTCTACSizeHit CountTotal NormTotal
No Reads
droKik1
C-AA-AGAACTAAGCGCC-------TGCGCCGCCACTG---CAACGACAAC------------------CGAACGAATTTT---TGCTGC---GGCTGCC-------------------ACAGCTACTGCGAACGAGCACA-TA------C-GTCGAGCAA--GCATCGT-GT----------AT--------AGCCGCAGA-------------AC----GAACGCACGA------ACACAAGCAAACAGGCAG--AGAAGG---------------------CGTCCCGTCGCCCGT---GCTGATTGTGTAAGAAGATGTAAA-CCTAACG--CTTTTACATTGCAGCCAAGTCAAGTCTCCCCTGCCGAT-GAG-GGGGTCTGC---TGGTGTCTAGCCCATC-----ACGTGGCASizeHit CountTotal NormTotal
No Reads
droFic1
T-AGA-------------------CCGTGGCGCCGCTA---CGACGACAAT------------------TAATTTCAGCTAAACTGCCAC---T---G-------------------------------T---CGAGCACTATA------CGGTCGTGTAA--ACATCAA-GT----------AT--------TTACACAGA-----------------------------------AAGCAAGCAAACAA--------ATGA---------------------CACCGCG-CGCTTGT---GCTGATTG------------TGAACCCTAATA--ATTTTACATTGCAGCCAAGTG-------TTCTGCCGGA-G--AG--GTCTGC---TGGTGTTTAACAAATC-----------ATSizeHit CountTotal NormTotal
No Reads
droEle1
T-AGA-------------------GCGCAACGCCTCTA---CAACGACAAC------------------CAATTTAAGCTCACCTGCTAC---T---G-------------------------------CAAAAGAGCACAAAG------C-GTCCAGTCA--ACATCGA-GT----------AT--------TACCACAGA-----------------------------------AAGCATGCAACCA----G--AAACTG---------------------CGTCCCGCTGCTTGT---GCCGATTG------------TGAA-CCTAATG--TTTTTACATTACAGCCGAGAT-------TTCTGCCGAA-G--AG--GTCTGC---TGGTATCTATCTAACC------------ASizeHit CountTotal NormTotal
No Reads
droRho1
T-AGA-------------------GCGCAACGCCGCTA---CAACGACAAC------------------CAATTTAAGCGTACCAG-------------------------------------------CGAACGAGAACAATA------C-GTCGAGTGA--ACATCGA-GT----------AT--------TACCACAGA-----------------------------------AAGCATGCAAACA----G--AAACGG---------------------CGTCCTGCCGCCTTT---GCTGATTG------------TGAA-CCTAATG--CTTTTACATTACAGCCGAGGT-------TTCTGCCGAA-G--AG--GTTAGC---TGGTGTCCGTCTAATC------------ASizeHit CountTotal NormTotal
No Reads
droBia1
T-AGA-------------------GCGCACCGCCGCTA---CAACAATAAC------------------CAATTTAGGCGCACCCGCTAC---T---G-------------------------------CGAACGAGCACAATA------C-GTCGAGTAA--ACATCGA-GT----------AT--------AACCACAGA-----------------------------------AAGCATGGA--------G--AAACGG---------------------CGTCCTGTCGCCTTA---GCTGGTTA------------TGAA-TTTTATG--CTTTTACATTACAGCCAAGT--------CTCTGCCGAA-G--AG--GTCTGC---TGATGTCCACTTAAT-------------CSizeHit CountTotal NormTotal
No Reads
droTak1
T-TA-G---------------------CA-----AGTA---CAACGACAAC------------------CAATTCTAGCGCACCTGCTAC---T---GCTA--CG------AA----------------CAAGCACGCACAATA------C-GTCGAGCGA--ACATCGA-GTATT-------AT--------AACCACAGA-----------------------------------AAGCGTTCAAACA----G--AAACGG--CCAAGCTG---------------CTGCCGCCTGTGCCGCTGACTC------------TGAA-CCTCACGAACCTTTACCTTACAGCCAAGTT--C--T-CGCTGCCGAG-AAGAG--GCCTGCTC-TGGTGTCCACTCAATC-------GCAAGCSizeHit CountTotal NormTotal
No Reads
droEug1
A-AT--T----TAGAAAGTAG----CGCGAAGCCGCCA---CG------------------------------------TCACCTGTTGA---T---G-------------------------------CAAACGGTCACAATG------C-GT-----------ATCGA-GTGTTATCGAGCAT--------TA-----------------------------------------------------CA----A--AAACGG---------------------CGTCCTGCCGCCTGG---GCTGATTG------------TGAA-ACTTATG--TTTTTATATTACAGCGAAGTT-------CTCAGCCGTG-A--AG--GT-CGCTA-TGGAGT----------------------GSizeHit CountTotal NormTotal
No Reads
dm3
A-----------------------GCTCACCTGCGCTA---CAACGACAAC------------------CAATTCAATCGCACCTGCTTC---T---G-------------------------------CAAGCGATCACAATA------C-GTCAAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAACAA--------------CCAGGTTA-------ATG-------GCTTCCTCT---GCTGACTA------------TGAAACTATACG--CCTTTACATTGCAGCCAAGAA-------------------------GCCTCT---TAGTGCA---------------------TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................AAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGC...................................................................................................................................................................................24116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020901000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000010010000010000000000000000
..........................................................................................................................................................................................................................................................................CAGGTTA-------ATG-------GCTTCCTCT---GCTGAC................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
...............................................................................................................................................................GA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGC...............................................................................................................................................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008
............................................................................................................................................AATA------C-GTCAAATGA--GCATCGA-GC------------------------...............................................................................................................................................................................................................................2318.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
..............................................................................................................................................TA------C-GTCAAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------.......................................................................................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................AATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCA..................................................................................................................................................................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AGCCAAGAA-------------------------GCCTCT---TAGT.........................1917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCA..............................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATTGCAGCCAAGAA-------------------------GCCTCT---T............................2116.0060000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000002000000000000100
........................GCTCACCTGCGCTA---CAACGACAAC------------------C..............................................................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ACAATA------C-GTCAAATGA--GC...............................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCCAAGAA-------------------------GCCTCT---TAGTGCA---------------------.2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATTGCAGCCAAGAA-------------------------GCCTCT---TAGT.........................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................ATTGCAGCCAAGAA-------------------------GCCTCT---.............................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000
...........................................................................AATCGCACCTGCTTC---T---G-------------------------------CAAGCGATCAC........................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATA------C-GTCAAATGA--GCATCGA-.........................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000001000000000000000000000000
.............................................GACAAC------------------CAATTCAATCGCACCTGCTTC---.......................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................................................................................................................................................................................................................................................................ATG-------GCTTCCTCT---GCTGACTA------------..................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATA------C-GTCAAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------.......................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000200000
....................................................................................................................................................................................................................................................................................................................................................TACATTGCAGCCAAGAA-------------------------GCCT..................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000002000000
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....................................................................................................................................................................CATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAACA..........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................................................................................................................................GCTGACTA------------TGAAACTATACG--CCTT................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................ATCGA-GC------------------------ACAGA-----------------------------------AAGCAAG................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................G-------------------------------CAAGCGATCACAATA------C-GTCAAATGA--.................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................ACATTGCAGCCAAGAA-------------------------GCCTCT---TAGT.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AGGTTA-------ATG-------GCTTCCTCT---GCTGACTA------------T.................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................A--------------CCAGGTTA-------ATG-------GCTTCCTCT---GCTGACT...............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TTTACATTGCAGCCAAGAA-------------------------GCCTCT---.............................2511.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TA---CAACGACAAC------------------CAATTCAATCGCA..................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................TTCAATCGCACCTGCTTC---T---...................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CGATCACAATA------C-GTCAAATGA--G................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CAATTCAATCGCACCTGCTTC---T---G-------------------------------CAAGC..............................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................C---T---G-------------------------------CAAGCGATCACAATA------C-GTCA........................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................ATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAACAA--------------C..........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TTTACATTGCAGCCAAGAA-------------------------GC....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAA............................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAAC...........................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CAATCGCACCTGCTTC---T---G-------------------------------CAAGC..............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AGCCAAGAA-------------------------GCCTCT---TAGTGC.......................2111.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AGCGATCACAATA------C-GTCA........................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................ATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AA.....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GCTCACCTGCGCTA---CAACGACA...................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AA--------------CCAGGTTA-------ATG-------GCTTCC............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CCTTTACATTGCAGCCAAGAA-------------------------GCC...................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................GATCACAATA------C-GTCAAATGA--GCATCGA-.........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TGAAACTATACG--CCTTTACATTGCAGC.....................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATACG--CCTTTACATTGCAGCCAA..................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ATTCAATCGCACCTGCTTC---T---...................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................GA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGC...................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
................................................................................................................................................................................................................................................................................A-------ATG-------GCTTCCTCT---GCTGACT...............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CTGACTA------------TGAAACTATACG--....................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................CACAATA------C-GTCAAATGA--GCATCGA-GC------------------------A..............................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................AATTCAATCGCACCTGCTTC---.......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................ATGA--GCATCGA-GC------------------------ACAGA-----------------------------------.......................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AACAA--------------CCAGGTTA-------ATG-------GCTTCCTCT---GCTG..................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................AAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------A......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................AATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCAA.................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ACG--CCTTTACATTGCAGCCAAGAA-------------------------GCCT..................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................TA-------ATG-------GCTTCCTCT---GCTGACTA------------TGA...............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATA------C-GTCAAATGA--GCATCGA-GC------------------------A..............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TCAATCGCACCTGCTTC---T---G-------------------------------CAAGCGA............................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................C------------------------ACAGA-----------------------------------AAGCAAGCAAACA..........................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CAACGACAAC------------------CAATTCAATCG....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................AGCGATCACAATA------C-GTCAAATGA--GC...............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................AACGACAAC------------------CAATTCAATCG....................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AA--------------CCAGGTTA-------ATG-------GCTTCCTCT---GCTGAC................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ACAA--------------CCAGGTTA-------ATG-------GCTTCCTCT---GC....................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GGTTA-------ATG-------GCTTCCTCT---GCTG..................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................CAAACAA--------------CCAGGTTA-------ATG-------GCTTC.............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................CAGGTTA-------ATG-------GCTTCCTCT---GCTGACT...............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
A-----------------------GCTCACCTGCGCTA---CAACGACA...................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TGCAGCCAAGAA-------------------------GCCTCT---TAGTGCA---------------------T2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................TTTACATTGCAGCCAAGAA-------------------------GCCTCT---TAGT.........................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AATCGCACCTGCTTC---T---G-------------------------------CAAG...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CAGCCAAGAA-------------------------GCCTCT---TAGTG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TTCCTCT---GCTGACTA------------TGAAACTATACG--C...................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................ACAATA------C-GTCAAATGA--GCATCGA-G........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....................................................................................................................................................................CATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAACAC--------------...........................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AC------------------CAATTCAATCGCACCTGCTTC---T---G-------------------------------CAAGC..............................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................C---T---G-------------------------------CAAGCGATCACAAT.....................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TTC---T---G-------------------------------CAAGCGATCACAATA------C-GTCA........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................AATA------C-GTCAAATGA--GCATCG...........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................CAGA-----------------------------------AAGCAAGCAAACAA--------------CCAGG......................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................GA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCAA.................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CAA--------------CCAGGTTA-------ATG-------GCTTC.............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTA-------ATG-------GCTTCCTCT---GCTGAC................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................AATCGCACCTGCTTC---T---G-------------------------------CAAGA..............................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................AATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGC...................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TATACG--CCTTTACATTGCAGCCAAGAA-------------------------......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
A-----------------------GCTCACCTGCGCTA---CAACGACAAT------------------CAATTCAAGCGCACCTGCTTC---T---G-------------------------------CAAGCGAGCACAA--------C-GTCAAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAACAA--------------CCAGGTTA-------ATG-------GCTTCCTCT---GCTGACAA------------TGAA-CTTTACG--CCTTTACATTGCAGCCAAGAA-------------------------GCCTCT---TAGTGCA---------------------TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................TCT---GCTGACAA------------TGAA-CTTTACG--CCT.................................................................................2514.00400400000000000000
.........................................................................................................................................................................................................................................................................................................CT---GCTGACAA------------TGAA-CTTTACG--CC..................................................................................2313.00300300000000000000
.......................................................................................................................................................................................................................................................................................................CTCT---GCTGACAA------------TGAA-CTTTACG--CC..................................................................................2512.00200200000000000000
..................................................................................................................................................................................................................................................................................................................................TGAA-CTTTACG--CCTTTACATTGC........................................................................2312.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................GAA-CTTTACG--CCTTTACATT..........................................................................2012.00200002000000000000
................................................................................................................................................................................................................................................................................................................TGACAA------------TGAA-CTTTACG--C...................................................................................1812.00200200000000000000
.....................................................................................................................................................................................................................................................................................................TCCTCT---GCTGACAA------------TGAA-CTTTACG--C...................................................................................2612.00200100010000000000
...................................................................................................................................................................................................................................................................................................................................GAA-CTTTACG--CCTTTACATTGCAGCC....................................................................2612.00200200000000000000
...........................................................................................................................................CAA--------C-GTCAAATGA--GCATC............................................................................................................................................................................................................................................................1812.00200200000000000000
..........................................................................................................................................ACAA--------C-GTCAAATGA--GCATCGA-GC------------------------...............................................................................................................................................................................................................................2311.00101000000000000000
..........................................................................................................................................................CAAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGC...................................................................................................................................................................................2511.00101000000000000000
................................................................................................................................................................A--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAAC...........................................................................................................................................................................2711.00100000100000000000
................................................................................................................................................................................................................................................................................................................TGACAA------------TGAA-CTTTACG--CCT.................................................................................2011.00100100000000000000
.....................................................................................................................................................................ATCGA-GC------------------------ACAGA-----------------------------------AAGCAA.................................................................................................................................................................................1811.00100000000001000000
..................................GCTA---CAACGACAAT------------------CAATTCAAGCG....................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
.......................................................................................TTC---T---G-------------------------------CAAGCGAGCACAA--------C-............................................................................................................................................................................................................................................................................1911.00100000000000100000
...................................................................................................................................................................................................................................................................................................CTTCCTCT---GCTGACAA------------TGAA-CC...........................................................................................2211.00100100000000000000
...............................................................................................................................................................................................................................................................................................................CTGACAA------------TGAA-CTTTACG--CCT.................................................................................2111.00100100000000000000
...............................................................................................................................................................................................................................................................................................................CTGACAA------------TGAA-CTTTACG--CCTTTACATT..........................................................................2811.00100100000000000000
.........................................................................................................................................................................................................................................................................................................CT---GCTGACAA------------TGAA-CTTTACG--CCT.................................................................................2411.00100100000000000000
..............................................................................................................................................................................................................................................................................................................GCTGACAA------------TGAA-CTTTACG--CC..................................................................................2111.00100100000000000000
.........................................................................................................................................................................................................................................................................CCAGGTTA-------ATG-------GCTTCCTCT---GCT...................................................................................................................2311.00100100000000000000
.......................................................................................................................................................................................................................................................................................................CTCT---GCTGACAA------------TGAA-CTTTACG--CCT.................................................................................2611.00110000000000000000
...................................................................................................................................................................................................................................................................................................................................GAA-CTTTACG--CCTTTACA............................................................................1811.00100010000000000000
........................................................................................................................................................GTCAAATGA--GCATCGA-GC------------------------ACA............................................................................................................................................................................................................................2111.00100100000000000000
..........................TCACCTGCGCTA---CAACGACAAT------------------CAATT..........................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
..........................................................................................................................................................CAAATGA--GCATCGA-GC------------------------ACA............................................................................................................................................................................................................................1911.00100001000000000000
................................................................................................................................................................................................................................................................................A-------ATG-------GCTTCCTCT---GCTGACAA------------TGAA-C............................................................................................2611.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................TTTACG--CCTTTACATTGC........................................................................1811.00100100000000000000
...............................................................................................................................................................................................................................................................................................................CTGACAA------------TGAA-CTTTACG--CCTTTACAT...........................................................................2711.00100100000000000000
................................................................................................................................................................................................................................................................................................................TGACAA------------TGAA-CTTTACG--CCTTTA..............................................................................2311.00100000001000000000
.................................................................................................................................CAAGCGAGCACAA--------C-GTCAA.......................................................................................................................................................................................................................................................................1911.00100010000000000000
.........................................................................................................................................................................................................................................................................................................CT---GCTGACAA------------TGAA-CTTTACG--CCC.................................................................................2411.00100100000000000000
.......................................................................................TTC---T---G-------------------------------CAAGCGAGCACAA--------C-GTCAAATG....................................................................................................................................................................................................................................................................2711.00100000001000000000
..........................................................................................................................................................................................................................................................................................................T---GCTGACAA------------TGAA-CTTTACG--C...................................................................................2111.00100100000000000000
.....................................................................................................................................................................................................................................................................................................TCCTCT---GCTGACAA------------TGAA-CT...........................................................................................2011.00100100000000000000
..............................................................................................................................................................................................................................................................................TTA-------ATG-------GCTTCCTCT---GCTGACAA------------TGAA-.............................................................................................2711.00100001000000000000
..............................................................................................................................................................................................................................................................................................................GCTGACAA------------TGAA-CTTTACG--CCG.................................................................................2211.00100100000000000000
......................................................................................................................................GAGCACAA--------C-GTCAAATGA--G................................................................................................................................................................................................................................................................1911.00100000000000100000
...........................................................................................................................................................................GC------------------------ACAGA-----------------------------------AAGCAAGCAAACA..........................................................................................................................................................................2011.00100000000000100000
....................................................................................................................................................................................................................................................................................................TTCCTCT---GCTGACAA------------TGAA-CT...........................................................................................2111.00100000001000000000
.....................................................................................................................................................................................................................................................................................................TCCTCT---GCTGACAA------------TGAA-CTTTACG--CCT.................................................................................2811.00100100000000000000
....................................................................................TGCTTC---T---G-------------------------------CAAGCGAGCACAA--------C-GTC.........................................................................................................................................................................................................................................................................2511.00100000000000010000
................................................................................................................................................................................................................................................................................A-------ATG-------GCTTCCTCT---GCTGACAA------------TGAA-CT...........................................................................................2711.00100100000000000000
........................................................................................................................................................................................................................................................................................ATG-------GCTTCCTCT---GCTGACAA------------TGAA-A............................................................................................2511.00100000000100000000
......................................................................................................................................................................................................................................................................................................CCTCT---GCTGACAA------------TGAA-CTTTACG--CC..................................................................................2611.00100100000000000000
..............................................................................................................................................................................................................................................................................................................GCTGACAA------------TGAA-CTTTACG--CCT.................................................................................2211.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................GCAGCCAAGAA-------------------------GCCTCT---TAGTGC.......................2311.00100000000000100000
droSec2
A-----------------------GCTCACCTGCGCTA---CAACGACAAT------------------CAATTCAAGCGCACCTGCTTC---T---G-------------------------------CAAGCGAGCACAA--------C-GTCAAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGCAAACAA--------------CCAGGTTA-------ATGGCAT-------CCTCT---GCTGACAA------------TGAA-CTTTACG--CCTTTACATTGCAGCCAAGAA-------------------------GCCTCT---TAGTGCA---------------------TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................ATCGA-GC------------------------ACAGA-----------------------------------AAGCAAGC...............................................................................................................................................................................2012.0020020
............................................CGACAAT------------------CAATTCAAGCGCACC................................................................................................................................................................................................................................................................................................................................................2211.0010010
..........................................................................................................................................................................................................................................................................................................................................................GCAGCCAAGAA-------------------------GCCTCT---TAGT.........................2111.0010010
............................................................................................................................................................................................................................................................................................................................................................AGCCAAGAA-------------------------GCCTCT---TAGTGC.......................2111.0010010
.......................................................................................................................................................................................................................................................................................................CTCT---GCTGACAA------------TGAA-CTTTACG--C...................................................................................2411.0010001
........................................................................................................................................................GTCAAATGA--GCATCGA-GC------------------------ACAGA-----------------------------------AA.....................................................................................................................................................................................2511.0010010
...................................................................................................................................................................................................................................................................................................................CAA------------TGAA-CTTTACG--CCTTTACA............................................................................2211.0011000
..........................................................................CAAGCGCACCTGCTTC---T---G-------------------------------CAAGCGA............................................................................................................................................................................................................................................................................................2511.0010010
..........................................................................................................................................ACAA--------C-GTCAAATGA--GCATCGA-G........................................................................................................................................................................................................................................................2211.0010010
............................ACCTGCGCTA---CAACGACAAT------------------CAATT..........................................................................................................................................................................................................................................................................................................................................................2511.0011000
............................................................................................................................................................................................................................................................................GGTTA-------ATGGCAT-------CCTCT---GCTGACAA------------TG................................................................................................2711.0011000
.........................................................................................................................................................................................................A-----------------------------------AAGCAAGCAAACAA--------------CCAG.......................................................................................................................................................1911.0010001
.........................CTCACCTGCGCTA---CAACGAC....................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...........................................................................................................................................................................................................................................................................................................................................................CAGCCAAGAA-------------------------GCCTCT---TAGTGC.......................2211.0010010
..............................................................................................................................................................................................................................................................................................................................................................CCAAGAA-------------------------GCCTCT---TAGTGC.......................1911.0010010
droYak3
A-----------------------GATCACCTGCGCTA---CAACGACAAC------------------CAATTCGAGCGCACCTGCTTC---T---G-------------------------------CAAGCGAGCACAATA------C-GTCAATTGA--GCATCGAAG------------------------CACAGA-----------------------------------AAGCAAGCCAACAA--------------CCAGGTTA---------------ATGCTCCCTGT---GCTGACAA------------TGAA-CCTTACG--CTTTTACATTGCAGCCAAGAA-------------------------GCCTCC---TAGTGCATGTTCAACTACC---------ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................GGTTA---------------ATGCTCCCTGT---GCTGACAA------------T.................................................................................................2515.00500000000005
.........................................................................................C---T---G-------------------------------CAAGCGAGCACAATA------C-GTC.........................................................................................................................................................................................................................................................................2212.00200000020000
........................................................................TTCGAGCGCACCTGCTTC---T---G-------------------------------C..................................................................................................................................................................................................................................................................................................2112.00201000010000
.............................................................................................................................................ATA------C-GTCAATTGA--GCATCGA..........................................................................................................................................................................................................................................................2012.00200000020000
............................................................................................................................................................................................................................................................................................................................................................AGCCAAGAA-------------------------GCCTCC---TAGT.........................1912.00202000000000
..........................................AACGACAAC------------------CAATTCGAGCGCACC................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................GCAGCCAAGAA-------------------------GCCTCC---TAGT.........................2111.00101000000000
...................................................................................................................................................................................................................................................................................................CTCCCTGT---GCTGACAA------------TGAA-CC...........................................................................................2211.00100100000000
...............................................................................................................................................................................................................................................................................TA---------------ATGCTCCCTGT---GCTGACAA------------TGAA-CC...........................................................................................2711.00100100000000
.........................................................................................................................................................................................................................................................................................................................................TTACG--CTTTTACATTGCAGCCAAGAA-------------------------GCC...................................2911.00101000000000
.............................................................................................................................................................................................................................................AAGCAAGCCAACAA--------------CCAGGT.....................................................................................................................................................2011.00101000000000
...............................................CAAC------------------CAATTCGAGCGCACCTGCTTC---.......................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..................................GCTA---CAACGACAAC------------------CAATTCGAGC.....................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
...................................................................................................................................................................GCATCGAAG------------------------CACAGA-----------------------------------AAGCAAGC...............................................................................................................................................................................2311.00100000100000
..............................................................................................................................................................TGA--GCATCGAAG------------------------CACAGA-----------------------------------.......................................................................................................................................................................................1811.00101000000000
.................................................AC------------------CAATTCGAGCGCACCTG..............................................................................................................................................................................................................................................................................................................................................1911.00100100000000
................................................................................................................................................................A--GCATCGAAG------------------------CACAGA-----------------------------------AAGCAAGC...............................................................................................................................................................................2411.00101000000000
................................................AAC------------------CAATTCGAGCGCACCTGC.............................................................................................................................................................................................................................................................................................................................................2111.00100000010000
......................................................................AATTCGAGCGCACCTGCTTC---T---G-------------------------------CAAGCG.............................................................................................................................................................................................................................................................................................2811.00100100000000
...........................................................................................................................................................AATTGA--GCATCGAAG------------------------CACAGA-----------------------------------AAGC...................................................................................................................................................................................2511.00100000010000
.............................................................................................................................................ATA------C-GTCAATTGA--GCATCGAAG------------------------CACAGA-----------------------------------.......................................................................................................................................................................................2811.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................A-------------------------GCCTCC---TAGTGCATGTTCAACTACC---------.2611.00100100000000
.......................................................................................TTC---T---G-------------------------------CAAGCGAGCACAATA------C-GTC.........................................................................................................................................................................................................................................................................2411.00101000000000
........................GATCACCTGCGCTA---CAACGA.....................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.........................................................................................C---T---G-------------------------------CAAGCGAGCACAATA------C-GTCAATTGA--.................................................................................................................................................................................................................................................................2811.00101000000000
...............................................................................GCACCTGCTTC---T---G-------------------------------CAAGCGAGCAC........................................................................................................................................................................................................................................................................................2411.00100000010000
........................................................................................................................................................GTCAATTGA--GCATCGAAG------------------------CACAGA-----------------------------------A......................................................................................................................................................................................2511.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................A-------------------------GCCTCC---TAGTGCATGTTCAAC..............2211.00100100000000
..............................................................................................................................................TA------C-GTCAATTGA--GCATCGAAG------------------------CACA............................................................................................................................................................................................................................2511.00100100000000
.............................................................................................................................................................................................................................................................................GTTA---------------ATGCTCCCTGT---GCTGAC................................................................................................................2111.00110000000000
..............................................................................................................................................................................................................................................................................................................GCTGACAA------------TGAA-CCTTACG--CTTT................................................................................2311.00100100000000
............................................................................................................................................................ATTGA--GCATCGAAG------------------------CACAGA-----------------------------------.......................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................TA------C-GTCAATTGA--GCATCGAAG------------------------CACAGA-----------------------------------.......................................................................................................................................................................................2711.00100000010000
.................................................AC------------------CAATTCGAGCGCACCTGC.............................................................................................................................................................................................................................................................................................................................................2011.00100100000000
......................................................................................................................................................................TCGAAG------------------------CACAGA-----------------------------------AAGCAAGCCA.............................................................................................................................................................................2211.00100010000000
..............................................................................................................................................................................................................................................................................................................................................................................................GCCTCC---TAGTGCATGTTC.................1811.00100010000000
...............................................................................GCACCTGCTTC---T---G-------------------------------CAAGCGA............................................................................................................................................................................................................................................................................................2011.00100000010000
.........................................................................TCGAGCGCACCTGCTTC---T---G-------------------------------CAAGC..............................................................................................................................................................................................................................................................................................2411.00100100000000
.............................................................................................................................................ATA------C-GTCAATTGA--GCATCGAAG------------------------C...............................................................................................................................................................................................................................2311.00100100000000
..........................................................................................................................................................CAATTGA--GCATCGAAG------------------------CACA............................................................................................................................................................................................................................2011.00100000010000
.....................................................................................................................................................................................................................................................CAACAA--------------CCAGGTTA---------------ATGCTCCC............................................................................................................................2211.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................ATTGCAGCCAAGAA-------------------------GCCTCC---TAGT.........................2411.00100000010000
............................................................................................................................................................................................................................................................................................................................................................AGCCAAGAA-------------------------GCCTCC---TAGTGCA......................2211.00100010000000
............................................................................................................................................................................................................................................................................................................................................................AGCCAAGAA-------------------------GCCTCC---TAGTG........................2011.00101000000000
........................................................................................................................................................GTCAATTGA--GCATCGAAG------------------------CAC.............................................................................................................................................................................................................................2111.00101000000000
...................................................................................CTGCTTC---T---G-------------------------------CAAGCGAGCACAATA------C-GTC.........................................................................................................................................................................................................................................................................2811.00100100000000
.....................................................................................................................................................................................................................................................................................................CCCTGT---GCTGACAA------------TGAA-CCTT.........................................................................................2211.00100100000000
.................................................................................................G-------------------------------CAAGCGAGCACAATA------C-GTC.........................................................................................................................................................................................................................................................................2011.00100000010000
........................................................................TTCGAGCGCACCTGCTTC---T---G-------------------------------CAAGCGAG...........................................................................................................................................................................................................................................................................................2811.00101000000000
.............................................GACAAC------------------CAATTCGAGCGCACCTGCT............................................................................................................................................................................................................................................................................................................................................2511.00100000010000
............................................................................................................................................AATA------C-GTCAATTGA--GCATCGAAG------------------------CACAGA-----------------------------------.......................................................................................................................................................................................2911.00100000010000
.............................................................................................................................................................................................................................................AAGCAAGCCAACAA--------------CCAGGTTA---------------AT..................................................................................................................................2411.00100000010000
............................................................................................................................................................ATTGA--GCATCGAAG------------------------CACAGA-----------------------------------AAGCAAGC...............................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................................................TA---------------ATGCTCCCTGT---GCTGACAA------------T.................................................................................................2211.00101000000000
...........................CACCTGCGCTA---CAACGACAAC------------------C..............................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..................................GCTA---CAACGACAAC------------------CAATTCGAGCG....................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.........................................CAACGACAAC------------------CAATTCGAGCGCACCT...............................................................................................................................................................................................................................................................................................................................................2611.00100000010000
...........................................................................................................................................................................................................................................................................AGGTTA---------------ATGCTCCCTGT---GCTGACAA------------T.................................................................................................2611.00101000000000
.................................CGCTA---CAACGACAAC------------------CAATTCGAGC.....................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
........................................................................................................................................................GTCAATTGA--GCATCGAAG------------------------CACAGA-----------------------------------.......................................................................................................................................................................................2411.00100000010000
.....................................................................................................................................................................ATCGAAG------------------------CACAGA-----------------------------------AAGCAAG................................................................................................................................................................................2011.00100100000000
..............................................................................................................................................................TGA--GCATCGAAG------------------------CACAGA-----------------------------------AAGCAAGC...............................................................................................................................................................................2611.00100000010000
.............................................................................................................................................ATA------C-GTCAATTGA--GCATCGAAG------------------------CACAGA-----------------------------------A......................................................................................................................................................................................2911.00100100000000
...............................................CAAC------------------CAATTCGAGCGCACCTGC.............................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.................................................................................................................................................................................................................................................................................................TGCTCCCTGT---GCTGACAA------------T.................................................................................................1911.00100100000000
.......................................................................ATTCGAGCGCACCTGCTTC---T---G-------------------------------CAAGCG.............................................................................................................................................................................................................................................................................................2711.00100100000000
...........................................................................................................................................CAATA------C-GTCAATTGA--GCATC............................................................................................................................................................................................................................................................2011.00101000000000
...............................................................................................................................................A------C-GTCAATTGA--GCATCGAAG------------------------CACAGA-----------------------------------.......................................................................................................................................................................................2611.00100100000000
...............................................................................GCACCTGCTTC---T---G-------------------------------CAAGCGAGC..........................................................................................................................................................................................................................................................................................2211.00100100000000
........................................................................................................................................................................................................................................................CAA--------------CCAGGTTA---------------ATGCTCCCC...........................................................................................................................2011.00100100000000
............................................................................................................................................................ATTGA--GCATCGAAG------------------------CACAGA-----------------------------------AAGCAAGCC..............................................................................................................................................................................2911.00100100000000
..................................................................................................................................................................................................................................................................................................................................................TTTACATTGCAGCCAAGAA-------------------------......................................1911.00101000000000
...............................................................................................................................................................GA--GCATCGAAG------------------------CACAGA-----------------------------------AAGCA..................................................................................................................................................................................2211.00100000010000
.........................................CAACGACAAC------------------CAATTCGAGC.....................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................CCAAGAA-------------------------GCCTCC---TAGTGCATGT...................2311.00100000010000
............................................................................................................................................................................................................................................................................................................................................CG--CTTTTACATTGCAGCCAAGA................................................................2211.00101000000000
............................ACCTGCGCTA---CAACGACAAC------------------CA.............................................................................................................................................................................................................................................................................................................................................................2211.00100010000000
........................GATCACCTGCGCTA---CAAC.......................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
..........................................................................CGAGCGCACCTGCTTC---T---G-------------------------------CAAGCGAG...........................................................................................................................................................................................................................................................................................2611.00100000010000
droEre2
A-----------------------GCTCACCTGCGCTA---CAACGACAAC------------------CAATTCAAGCGCACCTGCTTC---T---G-------------------------------CAAGCCAGCACAATA------C-GTCAAATGA--GCATCGA-GC------------------------ACCGA-----------------------------------AAGCAAGCA-ACAA--------------CCAGGTTA---------------ATGCTCCCTGC---GCTGACAA------------TGAA-CTTTACG--CTTTTACATTGCAGCCAAGAA-------------------------GCCTTC---TAGTGCA----------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................AGCCAAGAA-------------------------GCCTTC---TAGT.........................1913.0030000210
........................................................................................................................................................GTCAAATGA--GCATCGA-GC------------------------ACCGA-----------------------------------AA.....................................................................................................................................................................................2512.0020000200
.............................................................................................................................................ATA------C-GTCAAATGA--GCATCGA-GC------------------------...............................................................................................................................................................................................................................2212.0020100100
...........................................................................................................................................................................................................................................................................................................................................ACG--CTTTTACATTGCAGCCAAGA................................................................2311.0010001000
....................................................................................................................................................................CATCGA-GC------------------------ACCGA-----------------------------------AAGCAAGCA-A............................................................................................................................................................................2311.0010000010
..................................................................................................................................................................................................................................................................................................................................................TTTACATTGCAGCCAAGA................................................................1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................GCAGCCAAGAA-------------------------GCCTTC---TAGT.........................2111.0010000100
......................................................................................................................................................C-GTCAAATGA--GCATCGA-GC------------------------AC.............................................................................................................................................................................................................................2111.0011000000
.........................................................................................................................................................................................................................................................................................................................................TTACG--CTTTTACATTGCAGC.....................................................................2011.0010100000
...............................................CAAC------------------CAATTCAAGCGCACCTGC.............................................................................................................................................................................................................................................................................................................................................2211.0010001000
............................................................................................................................................................AATGA--GCATCGA-GC------------------------ACCGA-----------------------------------.......................................................................................................................................................................................1911.0010100000
.................................................................................................................................................................................................................................................................................................TGCTCCCTGC---GCTGACAA------------TGAA-CTTTA........................................................................................2711.0011000000
.........................................................................................................................................CACAATA------C-GTCAAATGA--GC...............................................................................................................................................................................................................................................................1911.0010000100
..............................................................................................................................................................................................................................................................................TTA---------------ATGCTCCCTGC---GCTGACAA------------T.................................................................................................2311.0011000000
....................................................................................................................................................................CATCGA-GC------------------------ACCGA-----------------------------------AAGCAAGCA-AC...........................................................................................................................................................................2411.0010100000
.....................................................................................................................................................................................................................................................................................................................................................ACATTGCAGCCAAGAA-------------------------GCCTTC---TAGTG........................2711.0010001000
.......................................................................................................................................AGCACAATA------C-GTCAAATG....................................................................................................................................................................................................................................................................1811.0010000010
...........................................................................................................................................CAATA------C-GTCAAATGA--GCATCGA-GC------------------------ACC............................................................................................................................................................................................................................2711.0011000000
....................................................................................................................................................................................................................................................................................................TCCCTGC---GCTGACAA------------TGAA-C............................................................................................2011.0010100000
.............................................................................................................................................................ATGA--GCATCGA-GC------------------------ACCGA-----------------------------------AAG....................................................................................................................................................................................2111.0010000010
.............................................................................................................................................................................................................................................................................................................................................................GCCAAGAA-------------------------GCCTTC---TAGT.........................1811.0010000010
..................................GCTA---CAACGACAAC------------------CAATTCAAG......................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..................................................................................CCTGCTTC---T---G-------------------------------CAAGCCAGCAC........................................................................................................................................................................................................................................................................................2111.0010100000
..................................GCTA---CAACGACAAC------------------CAATTCAAGC.....................................................................................................................................................................................................................................................................................................................................................2411.0010100000
............................................................................................................................................................................................................................................................................GGTTA---------------ATGCTCCCTGC---GCT...................................................................................................................1911.0011000000
...................................................................................................................................................................................................................................................................................................................................................TTACATTGCAGCCAAGAA-------------------------GCCTTC---TAGT.........................2811.0010000010
.................................................................................................G-------------------------------CAAGCCAGCACAATA------C-GTCAAATGA--G................................................................................................................................................................................................................................................................2711.0011000000
.............................................................................GCGCACCTGCTTC---T---G-------------------------------CAAGCCAGCACA.......................................................................................................................................................................................................................................................................................2711.0010000010
...............................................................................................................................................A------C-GTCAAATGA--GCATCGA-GC------------------------ACCGA-----------------------------------AA.....................................................................................................................................................................................2711.0010100000
.....................................................................................................................................................................................................................................................................................................................................A-CTTTACG--CTTTTACATTGCAGCCAAGA................................................................2811.0010100000
.............................................................................................................................................................................................................................................................................GTTA---------------ATGCTCCCTGC---GCTGACAA------------T.................................................................................................2411.0011000000
...............................................................................................................................................A------C-GTCAAATGA--GCATCGA-GC------------------------...............................................................................................................................................................................................................................2011.0010100000
....................................TA---CAACGACAAC------------------CAATTCAAGCGCA..................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..................................GCTA---CAACGACAAC------------------CAATTC.........................................................................................................................................................................................................................................................................................................................................................2011.0010100000
...............................................................................................................................................................................................................................................................................TA---------------ATGCTCCCTGC---GCTGACAA------------T.................................................................................................2211.0011000000
....................................................................................................................................................................................................................................................................................................................................AA-CTTTACG--CTTTTACATTGCA.......................................................................2211.0011000000

Generated: 05/18/2015 at 06:24 AM