ID:

dps_3209

 Coordinate:

XR_group8:332621-332771 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.1 -7.8 -7.7

Flybase annnotation

exon [dpse_GLEANR_8237:2]; CDS [Dpse\GA28462-cds]; intron [Dpse\GA28462-in]

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+
mature
  1. Unknown_group_348:48022-48048 +
  2. Unknown_group_286:14956-14982 +
  3. Unknown_singleton_3985:4967-4993 +
  4. Unknown_group_239:9125-9151 +
  5. 3:6470256-6470282 +
  6. 2:2416994-2417020 +
  7. Unknown_group_60:9841-9867 +
  8. XR_group8:326954-326980 +
  9. XR_group8:329799-329825 +
  10. dps_3209  XR_group8:332643-332669 +
  11. XR_group8:6658869-6658895 +
  12. Unknown_group_574:1874-1900 +
  13. Unknown_singleton_660:241-267 +
  14. XR_group6:4592867-4592893 +
  15. XR_group6:4781214-4781240 +
  16. XL_group1a:533435-533461 +
  17. Unknown_singleton_1050:1494-1520 +
  18. Unknown_singleton_3984:354-380 +
  19. Unknown_singleton_3983:352-378 +
  20. Unknown_singleton_2740:1537-1563 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGCGTCAGCTGCTTACACCAAAACGAAATTTGTTGTTGCTGTGGCCAATTTTTTCCGAGTCAAATTTTAGGTTGGGTTAAAATAAAATTATTTATAAAGAAAGCACAAGTTAAAGTACCCTGATATAGGTATCAAGTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCCGAAAGTGAATTCGGAAATTTTGCGCTTGGTCCTGATCTGGGCCGAGTACCACAAG
**************************************************....((..((((.(((((((.(((.(((...(((((....)))))......))).))).)))))))....))))...))........................................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body		 SRR902010
ovaries
 M059
embryo
 GSM444067
head
 M022
male body		 GSM343916
embryo
..........................................................................................................................................................................................................GAATTCGGAAATTTTGCGCTT............................ 21 0 8 2.00 16 15 1 0 0 0 0 0 0
............................................................................................................................................................................................................ATTCGGAAATTTTGCGCTTGG.......................... 21 0 8 2.00 16 7 9 0 0 0 0 0 0
.............................................................................................................................................................................................................TTCGGAAATTTTGCGCTTGGT......................... 21 0 8 1.75 14 7 7 0 0 0 0 0 0
........................................................................................................................................................................................................GTGAATTCGGAAATTTTGCGC.............................. 21 0 8 1.13 9 9 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGGAAATTTTGCGCTTGGTC........................ 20 0 8 1.13 9 6 2 1 0 0 0 0 0
.......................................................................................................................................................................................................AGTGAATTCGGAAATTTTGCG............................... 21 0 8 1.00 8 3 4 1 0 0 0 0 0
.........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGCT............................. 21 0 8 1.00 8 6 2 0 0 0 0 0 0
..............................................................................................................................................................................................................TCGGAAATTTTGCGCTTGGTC........................ 21 0 8 0.88 7 2 3 1 0 0 0 1 0
.............................................................................................................................................................................................................TTCGGAAATTTTGCGCTTGG.......................... 20 0 8 0.88 7 1 6 0 0 0 0 0 0
.....................................................................................................................................................................................................AAAGTGAATTCGGAAATTTTG................................. 21 0 8 0.88 7 3 3 1 0 0 0 0 0
......................................................................................................................................................................................................AAGTGAATTCGGAAATTTTGC................................ 21 0 8 0.63 5 3 2 0 0 0 0 0 0
...........................................................................................................................................................................................................AATTCGGAAATTTTGCGCTTG........................... 21 0 8 0.63 5 3 2 0 0 0 0 0 0
...............................................................................................................................................................................................................CGGAAATTTTGCGCTTGGTCCC...................... 22 1 7 0.57 4 0 3 0 0 0 1 0 0
......................................................................................................................................................................................................AAGTGAATTCGGAAATTTTG................................. 20 0 8 0.50 4 0 3 1 0 0 0 0 0
........................................................................................................................................................................................................GTGAATTCGGAAATTTTGCG............................... 20 0 8 0.50 4 2 1 1 0 0 0 0 0
........................................................................TGGGTTAAAATAAAATTATTTATAAAG........................................................................................................................................................ 27 0 20 0.40 8 0 2 0 6 0 0 0 0
..............................................................................................................................................................................................................TCGGAAATTTTGCGCTTGG.......................... 19 0 8 0.38 3 1 2 0 0 0 0 0 0
........................................................................TGGGTTAAAATAAAATTATTTATAAAGA....................................................................................................................................................... 28 0 20 0.30 6 0 0 0 6 0 0 0 0
..............................................................................................................................................................................................................TCGGAAATTTTGCGCTTGGTCCTGATC.................. 27 0 7 0.29 2 0 2 0 0 0 0 0 0
........................................................................................................................................................................................................................TGCGCTTGGTCCTGATCTGGGC............. 22 0 7 0.29 2 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................CGGAAATTTTGCGCTTGGT......................... 19 0 8 0.25 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGAATTCGGAAATTTTGCG............................... 19 0 8 0.25 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGC.............................. 20 0 8 0.25 2 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................TGATCTGGGCCGAGTACCAC... 20 0 8 0.25 2 0 0 0 0 1 1 0 0
.......................................................................................................................................................................................................AGTGAATTCGGAAATTTTGCGA.............................. 22 1 8 0.25 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TCGGAAATTTTGCGCTTGGT......................... 20 0 8 0.25 2 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................GGAAATTTTGCGCTTGGTC........................ 19 0 8 0.25 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGCCC............................ 22 2 8 0.25 2 0 2 0 0 0 0 0 0
.........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGCTT............................ 22 0 8 0.25 2 1 0 1 0 0 0 0 0
.........TGCTTACACCAAAACGAAATTTGTTGT....................................................................................................................................................................................................................... 27 0 20 0.25 5 3 0 1 0 0 0 0 1
.................................TGTTGCTGTGGCCAATTTTTTCCGAG................................................................................................................................................................................................ 26 0 20 0.20 4 2 2 0 0 0 0 0 0
TGCGTCAGCTGCTTACACCAAAACGA................................................................................................................................................................................................................................. 26 0 20 0.15 3 2 0 1 0 0 0 0 0
.............TACACCAAAACGAAATTTGTTGTTG..................................................................................................................................................................................................................... 25 0 20 0.15 3 0 3 0 0 0 0 0 0
......................................................................................................................................................................................................................TTTGCGCTTGGTCCTGATCTGT............... 22 1 7 0.14 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TCCTGATCTGGGCCGAGTACC..... 21 0 7 0.14 1 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................CTGATCTGGGCCGAGTACCAC... 21 0 7 0.14 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................................CGCTTGGTCCTGATCTGGG.............. 19 0 7 0.14 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................CGGAAATTTTGCGCTTGGTCC....................... 21 0 7 0.14 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................TTGCGCTTGGTCCTGATCTGG............... 21 0 7 0.14 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................ATTTTGCGCTTGGTCCTGATC.................. 21 0 7 0.14 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................TCGGAAATTTTGCGCTTGGTCC....................... 22 0 7 0.14 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TTTGCGCTTGGTCCTGATC.................. 19 0 7 0.14 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AATTTTGCGCTTGGTCCTGATCTCT............... 25 2 7 0.14 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................TTCGGAAATTTTGCGCTTGGTTCC...................... 24 2 7 0.14 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGCTCT........................... 23 2 8 0.13 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGTT............................. 21 1 8 0.13 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATTCGGAAATTTTGCGCTTG........................... 20 0 8 0.13 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTCGGAAATTTTGCGCTTG........................... 19 0 8 0.13 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................GAATTCGGAAATTTTGCGCT............................. 20 0 8 0.13 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTCGGAAATTTTGCGCTCGG.......................... 20 1 8 0.13 1 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................GAATTCGGAAATTTTGCGCTC............................ 21 1 8 0.13 1 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................................................ATCTGGGCCGAGTACCACAAG 21 0 8 0.13 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................TGCCGAAAGTGAATTCGGAAA...................................... 21 0 8 0.13 1 0 0 0 0 0 0 0 1
..................................................................................................................................................................................................CCGAAAGTGAATTCGGAAATTTTGC................................ 25 0 8 0.13 1 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................AATTCGGAAATTTTGCGCTT............................ 20 0 8 0.13 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGCTTG........................... 23 0 8 0.13 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................................TGATCTGGGCCGAGTACCA.... 19 0 8 0.13 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TGCGGAAATTTTGCGCTTGGTC........................ 22 1 8 0.13 1 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................AAGTGAATTCGGAAATTTTGA................................ 21 1 8 0.13 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................AGTGAATTCGGAAATTTTG................................. 19 0 8 0.13 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................GAATTCGGAAATTTTGCGCTTG........................... 22 0 8 0.13 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................GTGAGTTCGGAAATTTTGCGC.............................. 21 1 8 0.13 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TTCGGAAATTTTGCGCTTGGTC........................ 22 0 8 0.13 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................ATTCGGAAATTTTGCGCTTT........................... 20 1 8 0.13 1 0 0 1 0 0 0 0 0
....................................TGCTGTGGCCAATTTTTTCCGAGT............................................................................................................................................................................................... 24 0 16 0.13 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TGATCTGGGCCGAGTACCACA.. 21 0 8 0.13 1 1 0 0 0 0 0 0 0
.................................TGTTGCTGTGGCCAATTTTTTCCG.................................................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0 0 0
........................GAAATTTGTTGTTGCTGTGG............................................................................................................................................................................................................... 20 0 20 0.10 2 1 0 0 0 1 0 0 0
.........................AAATTTGTTGTTGCTGTGGCCAATT......................................................................................................................................................................................................... 25 0 20 0.10 2 0 0 0 2 0 0 0 0
TGCGTCAGCTGCTTACACCAAAACG.................................................................................................................................................................................................................................. 25 0 20 0.10 2 1 0 1 0 0 0 0 0
..................................................................TTAGGTTGGGTTAAAATAAAATTAT................................................................................................................................................................ 25 0 20 0.10 2 1 0 0 0 1 0 0 0
..........................AATTTGTTGTTGCTGTGGCC............................................................................................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0 0 0 0
..............................TGTTGTTGCTGTGGCCAATTTTTTCC................................................................................................................................................................................................... 26 0 20 0.10 2 0 2 0 0 0 0 0 0
.......................................................................ATGGGTTACAATAAAATTATTTATA........................................................................................................................................................... 25 2 20 0.10 2 0 2 0 0 0 0 0 0
....................AAACGAAATTTGTTGTTGCTGTGG............................................................................................................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0 0 0 0
...............................................................................................................GAAGTACCCTGATAAAGGA......................................................................................................................... 19 3 12 0.08 1 0 0 0 0 0 1 0 0
................................TTGTTGCTGTGGCCAATTTTTTCCGAGTC.............................................................................................................................................................................................. 29 0 15 0.07 1 1 0 0 0 0 0 0 0
.....................................................TCCGAGTCAAATTTTAGGTTG................................................................................................................................................................................. 21 0 16 0.06 1 1 0 0 0 0 0 0 0
.....................................................TCCGAGTCAAATTTTAGGTTGGG............................................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0 0 0 0 0
....................................................TTCCGAGTCAAATTTTAGGTTGG................................................................................................................................................................................ 23 0 16 0.06 1 0 0 0 0 0 1 0 0
.....................................................TCCGAGTCAAATTTTAGGTTGGATT............................................................................................................................................................................. 25 1 16 0.06 1 0 0 0 0 1 0 0 0
.................................TGTTGCTGTGGCCAATTTTTTCCGAGT............................................................................................................................................................................................... 27 0 16 0.06 1 1 0 0 0 0 0 0 0
...........................................................TCAAATTTTAGGTTGGGTTA............................................................................................................................................................................ 20 0 17 0.06 1 1 0 0 0 0 0 0 0
........................................................GAGTCAAATTTTGGGTTGGG............................................................................................................................................................................... 20 1 17 0.06 1 1 0 0 0 0 0 0 0
.........................................................AGTCAAATTTTAGGTTGGGAT............................................................................................................................................................................. 21 1 17 0.06 1 0 0 1 0 0 0 0 0
..............................................AATTTTTTCCGAGTCAAATTT........................................................................................................................................................................................ 21 0 17 0.06 1 1 0 0 0 0 0 0 0
.................................................................................ATAAAATTATTTATAAAGAAAGC................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
.........TGCTTACACCAAAACGAAATTTG........................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................TAGGTTGGGTTAAAATAAAATTATT............................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................ATTTTAGGTTGGGGTACCA......................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1
TGCGTCAGCTGCTTACACCAAAA.................................................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0 0 0
.......................................................................ATGGGTTACAATAAAATTATT............................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................TAGGTTGGGTTAAAATAAAATTA................................................................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0 0 0 0
................................................................TTTTAGGTTGGGATAAAATA....................................................................................................................................................................... 20 1 20 0.05 1 0 0 0 0 0 0 1 0
........CTGCTTACACCAAAACGAAAT.............................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0
...................................................................TAGGTTGGGTTAAAATAAAATT.................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................TGGGTTAAAATAAAATTATTTATAAA......................................................................................................................................................... 26 0 20 0.05 1 0 0 0 1 0 0 0 0
...........................ATTTGTTGTTGCTGTGGCC............................................................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 1 0
.............TACACCAAAACGAAATTTGTTG........................................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0
...................AAAACGAAATTTGTTGTTGCTGTGGC.............................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0 0 0
.............TACACCAAAACGAAATTTGTTGTTGCTGT................................................................................................................................................................................................................. 29 0 20 0.05 1 0 0 0 0 1 0 0 0
.................................TGTTGCTGTGGCCAATTTTTTCCGA................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TGATCTGGGCCGAGTTTCT.... 19 3 20 0.05 1 0 0 1 0 0 0 0 0
..........GCTTACACCAAAACGAAATTTGTTGT....................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................TTGGGTTAAAATAAAATTATTTA............................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................TGTTGTTGCTGTGGCCAATT......................................................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0 0 0
....................................TGCTGTGGCCAATTTTTTCC................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................ATTTGTTGTTGCTGTGGCCAA........................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
....................AAACGAAATTTGTTGTTGCTG.................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0
...............CACCAAAACGAAATTTGTTGTTGCTG.................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................AATTTTAGGTTGGGGTTAA.......................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 1 0 0 0

Anti-sense strand reads

ACGCAGTCGACGAATGTGGTTTTGCTTTAAACAACAACGACACCGGTTAAAAAAGGCTCAGTTTAAAATCCAACCCAATTTTATTTTAATAAATATTTCTTTCGTGTTCAATTTCATGGGACTATATCCATAGTTCAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACGGCTTTCACTTAAGCCTTTAAAACGCGAACCAGGACTAGACCCGGCTCATGGTGTTC
**************************************************....((..((((.(((((((.(((.(((...(((((....)))))......))).))).)))))))....))))...))........................................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 SRR902010
ovaries
 M059
embryo
 SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................ACTAGACCCGGCTCATGGTGT.. 21 0 8 0.50 4 3 1 0 0 0
......................................................GGCTCAGTTTAAAATCCAACCCAATTTT......................................................................................................................................................................... 28 0 16 0.50 8 3 0 5 0 0
.........................................................TCAGTTTAAAATCCAACCCAATTTT......................................................................................................................................................................... 25 0 17 0.47 8 5 0 1 2 0
......................................................................................................................................................................................................................................TAGACCCGGCTCATGGTGTT. 20 0 8 0.38 3 3 0 0 0 0
.CGCAGTCGACGAATGTGGTTTT.................................................................................................................................................................................................................................... 22 0 20 0.25 5 3 2 0 0 0
.............................................................................................................................................................................................................AAGCCTTTAAAACGCGAACCA......................... 21 0 8 0.25 2 2 0 0 0 0
.....................................CGACACCGGTTAAAAAAGGCTCAGTT............................................................................................................................................................................................ 26 0 16 0.19 3 2 0 0 1 0
..........................................................CAGTTTAAAATCCAACCCAATTTT......................................................................................................................................................................... 24 0 17 0.18 3 2 0 1 0 0
...........................................CGGTTAAAAAAGGCTCAGTTT........................................................................................................................................................................................... 21 0 17 0.18 3 0 3 0 0 0
...CAGTCGACGAATGTGGTTTTGCTT................................................................................................................................................................................................................................ 24 0 20 0.15 3 0 0 3 0 0
....................TTTGCTTTAAACAACAACGACACCGGT............................................................................................................................................................................................................ 27 0 20 0.15 3 2 0 0 1 0
..GCAGTCGACGAATGTGGTTTT.................................................................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0
.......................................................................................................................................................................................................................AACGCGAACCAGGACTAGACCCGGCT.......... 26 0 7 0.14 1 0 0 1 0 0
.......................................................................................................................................................................................................................................AGACCCGGCTCATGGTGTTC 20 0 8 0.13 1 1 0 0 0 0
...................................AACGACACCGGTTAAAAAAGGCTCA............................................................................................................................................................................................... 25 0 16 0.13 2 0 2 0 0 0
................................................................................................................................................................................................ACGGCTTTCACTTAAGCCTT....................................... 20 0 8 0.13 1 1 0 0 0 0
...................................................................................................................................................................................................................................CCTTAGACCCGGCTCATGGTGTTC 24 3 8 0.13 1 0 1 0 0 0
.....................................................................................................................................................................................................TTTCACTTAAGCCTTTAAAACGCGA............................. 25 0 8 0.13 1 1 0 0 0 0
......................................GACACCGGTTAAAAAAGGCTCAGT............................................................................................................................................................................................. 24 0 16 0.13 2 2 0 0 0 0
....................................................AAGGCTCAGTTTAAAATCCAACCCA.............................................................................................................................................................................. 25 0 16 0.13 2 0 2 0 0 0
......................................................................................................................................................................................................TTCACTTAAGCCTTTAAAACG................................ 21 0 8 0.13 1 1 0 0 0 0
........................................CACCGGTTAAAAAAGGCTCAG.............................................................................................................................................................................................. 21 0 16 0.13 2 2 0 0 0 0
....................................................................................................................................................................................................CTTTCACTTAAGCCTTTAAAA.................................. 21 0 8 0.13 1 1 0 0 0 0
................................................................................................................................................................................................................................TAGCTCTAGACCCGGCTCATGGTGTT. 26 3 8 0.13 1 0 1 0 0 0
......................................................................................................................................................................................................................................AAGACCCGGCTCATGGTGTTC 21 1 8 0.13 1 1 0 0 0 0
......................................................GGCTCAGTTTAAAATCCAACCCT.............................................................................................................................................................................. 23 1 16 0.13 2 2 0 0 0 0
........................................CACCGGTTAAAAAAGGCTCAGT............................................................................................................................................................................................. 22 0 16 0.13 2 2 0 0 0 0
.................................................................................................................................................................................................CGGCTTTCACTTAAGCCTTTA..................................... 21 0 8 0.13 1 1 0 0 0 0
..................................................................................................................................................................................................GGCTTTCACTTAAGCCTTTAA.................................... 21 0 8 0.13 1 1 0 0 0 0
......................................................................................................................................................................................................................................TTGACCCGGCTCATGGTGTT. 20 1 8 0.13 1 1 0 0 0 0
................................................................................................................................................................................................ACGGCTTTCACTTAAGCCTTT...................................... 21 0 8 0.13 1 1 0 0 0 0
......................................................GGCTCAGTTTAAAATCCAACCCA.............................................................................................................................................................................. 23 0 16 0.13 2 2 0 0 0 0
......................................................................................................................................................................................................................................TAGACCCGGCTCATGGTGTTC 21 0 8 0.13 1 0 1 0 0 0
....................................................................................................................................................................................................................................TCTTGACCCGGCTCATGGTGT.. 21 2 8 0.13 1 0 1 0 0 0
........................................................ATCAGTTTAAAATCCAACCCAATTTT......................................................................................................................................................................... 26 1 17 0.12 2 1 0 1 0 0
.......................................................GCTCAGTTTAAAATCCAACCCAATTTT......................................................................................................................................................................... 27 0 17 0.12 2 1 0 1 0 0
.......CGACGAATGTGGTTTTGCTTT............................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0
....AGTCGACGAATGTGGTTTTGCTT................................................................................................................................................................................................................................ 23 0 20 0.10 2 0 2 0 0 0
.....................................CGACACCGGTTAAAAAAGGC.................................................................................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0
ACGCAGTCGACGAATGTGGTTT..................................................................................................................................................................................................................................... 22 0 20 0.10 2 0 2 0 0 0
.....................TTGCTTTAAACAACAACGACACCGGT............................................................................................................................................................................................................ 26 0 20 0.10 2 2 0 0 0 0
.....GTCGACGAATGTGGTTTTGC.................................................................................................................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0
.....................................................................................................................................................................................................................AAAAACCGAACCAGGACTA................... 19 2 12 0.08 1 1 0 0 0 0
..........................................CAGGTTAAAAAAGGCTCAGTTTAAAAT...................................................................................................................................................................................... 27 1 15 0.07 1 0 0 0 1 0
....................................................................................................................................................................................................................................TTTAGACCCGGCTCATGGT.... 19 2 15 0.07 1 1 0 0 0 0
....................................................AAGGCTCAGTTTAAAATCCAACCCT.............................................................................................................................................................................. 25 1 16 0.06 1 1 0 0 0 0
..................................AAACGACACCGGTTAAAAAAGGCTCAG.............................................................................................................................................................................................. 27 1 16 0.06 1 1 0 0 0 0
.....................................................AGGCTCAGTTTAAAATCCAACCCAATTT.......................................................................................................................................................................... 28 0 16 0.06 1 1 0 0 0 0
...................................................AAAGGCTCAGTTTAAAATCCAACCCTAT............................................................................................................................................................................ 28 1 16 0.06 1 1 0 0 0 0
.....................................................AGGCTCAGTTTAAAATCCAACCCT.............................................................................................................................................................................. 24 1 16 0.06 1 1 0 0 0 0
...................................................AAAGGCTCAGTTTAAAATCCAACCCAAT............................................................................................................................................................................ 28 0 16 0.06 1 1 0 0 0 0
.....................................................AGGCTCAGTTTAAAATCCAA.................................................................................................................................................................................. 20 0 16 0.06 1 1 0 0 0 0
......................................................GGCTCAGTTTAAAATCCAACCCAAT............................................................................................................................................................................ 25 0 16 0.06 1 1 0 0 0 0
....................................................AAGGCTCAGTTTAAAATCCAACCCTAT............................................................................................................................................................................ 27 1 16 0.06 1 1 0 0 0 0
.....................................................AGGCTCAGTTTAAAATCCAACCC............................................................................................................................................................................... 23 0 16 0.06 1 1 0 0 0 0
.....................................................AGGCTCAGTTTAAAATCCAACCCAATTTT......................................................................................................................................................................... 29 0 16 0.06 1 1 0 0 0 0
......................................................GGCTCAGTTTAAAATCCAACCCAATTT.......................................................................................................................................................................... 27 0 16 0.06 1 1 0 0 0 0
...................................................AAAGGCTCAGTTTAAAATCCAACCCT.............................................................................................................................................................................. 26 1 16 0.06 1 1 0 0 0 0
.........................................................TCAGTTTAAAATCCAACCCAATTTTAT....................................................................................................................................................................... 27 0 17 0.06 1 0 0 1 0 0
............................................GGTTAAAAAAGGCTCAGTTT........................................................................................................................................................................................... 20 0 17 0.06 1 1 0 0 0 0
...........................................CGGTTAAAAAAGGCTCAGTTTA.......................................................................................................................................................................................... 22 0 17 0.06 1 0 0 0 0 1
........................................................CTCAGTTTAAAATCCAACCCAATTTT......................................................................................................................................................................... 26 0 17 0.06 1 1 0 0 0 0
............................................GGTTAAAAAAGGCTCAGTT............................................................................................................................................................................................ 19 0 18 0.06 1 1 0 0 0 0
.....................................................AGGCTCAGTTTAAAGTCCAAC................................................................................................................................................................................. 21 1 19 0.05 1 1 0 0 0 0
......................TGCTTTAAACAACAACGACACCGGT............................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
......................TGCTTTAAACAACAACGACAC................................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
......................................................................................TAATAAATATTTCTTTCGTGTTCAAT........................................................................................................................................... 26 0 20 0.05 1 0 0 1 0 0
..........................TTAAACGACAACGACACCGGTT........................................................................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0
..........................................................................................AAATATTTCTTTCGTGTTCAAT........................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
..GCAGTCGACGAATGTGGT....................................................................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0
......TCGACGAATGTGGTTTTGCTTTA.............................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0
.................................................................AAATCCAACCCTATTTTATTT..................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 1 0
.....................TTGCTTTAAACAACAACGACACCGGTT........................................................................................................................................................................................................... 27 0 20 0.05 1 0 1 0 0 0
...............................................................................TTTATTTTAATAAATATTTCTTTCGT.................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
ACGCAGTCGACGAATGTGGTT...................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
ACGCAGTCGACGAATGTGGTTTT.................................................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
................CGGTTTTGCTTTAAACAACAACGA................................................................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 1 0
.......CGACGAATGTGGTTTTGCTTTAAACAAC........................................................................................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................GACTATATCCATAGTTCAAAT............................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
ACGCAGTCGACGAATGTGGT....................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
..GCAGTCGACGAATGTGGTTTTGCTTT............................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.....GTCGACGAATGTGGTTTTGCT................................................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0 0
......CCGACGAATGTGGTTTTGCTTTAAAAAA......................................................................................................................................................................................................................... 28 2 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group8:332571-332821 + dps_3209 TGCGTCAGCTGCTTACACCAAAACGAAATTTGTTGTTGCTGTGGCCAA-TTTTTTCCGAGTCAAATTTTAGGTTGGGTTAAAATAAAATT-ATTTATAAAGAAAGCACAAGTTAAAGTACCCTGATATAGGTATCAAGTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCCGAAAGTGAATTCGGAAATTTTGCGCTTGGTCCTGATCTGGGCCGAGTACCACAAG
droPer2 scaffold_6:3612005-3612145 + TGCGTCAGCTGCTTACACCAAAACGAAATTTGTTGTTGCTGTGGCCAA-TTTTTTCCGAGTCAAATTTTAGGTTGGGTTAAAATAAAATT-ATTTATAAAGAAAGCACAAGTTAAATTACCCTGATATAGGTATCAAGTTT--------------------------------------------------------------------------------------------------------------AT
droWil2 scf2_1100000004590:2587614-2587673 + CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTAATGTGAATTCAACCATTTTGCGCAAGGTTCTCACCTGGGCCCATTATCACAAG
droVir3 scaffold_12970:5302091-5302149 - T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAATGTGAATTCGACAATTTTGAGAAAAGTGTTGACCTGGGCCAACTATCACAAG
droMoj3 scaffold_6473:4879810-4879869 - CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAATGTGAATTCAACAATATTGAGAAAGGTGTTGACTTGGGCCACCTATCACAAG
droGri2 scaffold_14853:532363-532421 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAATGTAAATTCGACAATTTTGCGAAAGGTTCTGACGTGGGCCAATTATCACAAA
droAna3 scaffold_13117:577168-577226 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAACGTCAACTCGACCATCCTACGCAAGGTCCTGATCTGGGCCCATTACCACAAG
droBip1 scf7180000395386:5916-6047 + TT-ATCGGTCGCTC--ACCAAAACGAAAATTGTTGTTGCCGACGGCAA-AATTTTAT-ATCCAAATTTGAGGTGGGGTCAGAAATTACTTGTTTTAAAAAATAATTACAAGCCTAATTGATCTTCTAGAGATCTTA--------------------------------------------------------------------------------------------------------------------A
droKik1 scf7180000302405:7180-7296 - CG---------------CCAAAACGAGAAAACTGGTTGAACATGGCAA-AATTGTTGTTGTCAAATCTGAGGTGGGGTCAGAAATAAATT-TTTTATAAAATAACTACATGCCAGAATGATCTTATGGTGGTGT-----------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453299:7105-7239 + TTTATCGGCCCCAT--AGCAAAACGAAAGTTGTTGTTGCCGACGGCAAATATTTTATGTATG-AAATCAAGATGGTGTCAGAAAAGAATT-ATTTAAAAAGTAAATACGAATTAGATTGACCTACTAATGATGTGA------------------------------------------------------------------------------------------------------------------AAT
droEle1 scf7180000491201:1464459-1464518 + CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAACTCGGCCATTTTGAAAAAGGTACTGATTTGGGCCAAGCACCATCAG
droRho1 scf7180000779506:788377-788436 - CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCCACGATCCTTCGCAAGGTCCTCACCTGGGCCCATTACCACAAG
droBia1 scf7180000301760:965093-965152 - CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAACGTGAACTCGACGATCCTGCGCAAGGTGCTCACCTGGGCCCACTACCACAAG
droTak1 scf7180000415711:1632740-1632799 + CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAACTCGGAGATTCTTCGTAAAGTACTCACCTGGGCTCAATACCACAAG
droEug1 scf7180000409277:338660-338719 - CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCAATGTAAACTCCACCATTCTTCGCAAGGTCCTAACCTGGGCCCATTACCACAAG
dm3 chrX:551279-551337 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCGACGATTCTTCGCAAGGTGCTTACCTGGGCTCACTACCACAAG
droSim2 x:462780-462838 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCGACGATCCTTCGCAAGGTGCTTACCTGGGCGCACTACCACAAG
droSec2 scaffold_10:396677-396735 + T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCGACGATCCTTCGCAAGGTGCTTACCTGGGCGCACTACCACAAG
droYak3 v2_chrUn_1899:34613-34712 - TACTTCAACCCCTT--ACCAAATCGTAAATTGTTGTTGCCGACGGCAA-CATTTTGTTTGTCAAATCTGAGGTGGGGTCAAAAATATATG-TTTTATAAAATAA-----------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4644:507385-507444 + CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTCAACTCGACGATCCTCCGCAAGGTGCTTACCTGGGCCCACTACCACAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGCGTCAGCTGCTTACACCAAAACGAAATTTGTTGTTGCTGTGGCCAA-TTTTTTCCGAGTCAAATTTTAGGTTGGGTTAAAATAAAATT-ATTTATAAAGAAAGCACAAGTTAAAGTACCCTGATATAGGTATCAAGTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCCGAAAGTGAATTCGGAAATTTTGCGCTTGGTCCTGATCTGGGCCGAGTACCACAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................GAATTCGGAAATTTTGCGCTT............................2182.001601500000010
..............................................................................................................................................................................................................ATTCGGAAATTTTGCGCTTGG..........................2182.00160700000090
...............................................................................................................................................................................................................TTCGGAAATTTTGCGCTTGGT.........................2181.75140700000070
..........................................................................................................................................................................................................GTGAATTCGGAAATTTTGCGC..............................2181.1390900000000
.................................................................................................................................................................................................................CGGAAATTTTGCGCTTGGTC........................2081.1390600001020
.........................................................................................................................................................................................................AGTGAATTCGGAAATTTTGCG...............................2181.0080300001040
...........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGCT.............................2181.0080600000020
................................................................................................................................................................................................................TCGGAAATTTTGCGCTTGGTC........................2180.8871200001030
...............................................................................................................................................................................................................TTCGGAAATTTTGCGCTTGG..........................2080.8870100000060
.......................................................................................................................................................................................................AAAGTGAATTCGGAAATTTTG.................................2180.8870300001030
........................................................................................................................................................................................................AAGTGAATTCGGAAATTTTGC................................2180.6350300000020
.............................................................................................................................................................................................................AATTCGGAAATTTTGCGCTTG...........................2180.6350300000020
.................................................................................................................................................................................................................CGGAAATTTTGCGCTTGGTCCC......................2270.5740000010030
........................................................................................................................................................................................................AAGTGAATTCGGAAATTTTG.................................2080.5040000001030
..........................................................................................................................................................................................................GTGAATTCGGAAATTTTGCG...............................2080.5040200001010
.........................................................................TGGGTTAAAATAAAATT-ATTTATAAAG........................................................................................................................................................27200.4080000000620
................................................................................................................................................................................................................TCGGAAATTTTGCGCTTGG..........................1980.3830100000020
.........................................................................TGGGTTAAAATAAAATT-ATTTATAAAGA.......................................................................................................................................................28200.3060000000600
................................................................................................................................................................................................................TCGGAAATTTTGCGCTTGGTCCTGATC..................2770.2920000000020
..........................................................................................................................................................................................................................TGCGCTTGGTCCTGATCTGGGC.............2270.2920100001000
.................................................................................................................................................................................................................CGGAAATTTTGCGCTTGGT.........................1980.2520200000000
...........................................................................................................................................................................................................TGAATTCGGAAATTTTGCG...............................1980.2520200000000
...........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGC..............................2080.2520100000010
......................................................................................................................................................................................................................................TGATCTGGGCCGAGTACCAC...2080.2520010010000
.........................................................................................................................................................................................................AGTGAATTCGGAAATTTTGCGA..............................2280.2520200000000
................................................................................................................................................................................................................TCGGAAATTTTGCGCTTGGT.........................2080.2520100000010
..................................................................................................................................................................................................................GGAAATTTTGCGCTTGGTC........................1980.2520200000000
...........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGCCC............................2280.2520000000020
...........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGCTT............................2280.2520100001000
.........TGCTTACACCAAAACGAAATTTGTTGT.........................................................................................................................................................................................................................27200.2550300101000
.................................TGTTGCTGTGGCCAA-TTTTTTCCGAG.................................................................................................................................................................................................26200.2040200000020
TGCGTCAGCTGCTTACACCAAAACGA...................................................................................................................................................................................................................................26200.1530200001000
.............TACACCAAAACGAAATTTGTTGTTG.......................................................................................................................................................................................................................25200.1530000000030
........................................................................................................................................................................................................................TTTGCGCTTGGTCCTGATCTGT...............2270.1410000000010
...................................................................................................................................................................................................................................TCCTGATCTGGGCCGAGTACC.....2170.1410000000010
.....................................................................................................................................................................................................................................CTGATCTGGGCCGAGTACCAC...2170.1410000001000
............................................................................................................................................................................................................................CGCTTGGTCCTGATCTGGG..............1970.1410000000010
.................................................................................................................................................................................................................CGGAAATTTTGCGCTTGGTCC.......................2170.1410000000010
.........................................................................................................................................................................................................................TTGCGCTTGGTCCTGATCTGG...............2170.1410000001000
......................................................................................................................................................................................................................ATTTTGCGCTTGGTCCTGATC..................2170.1410000000010
................................................................................................................................................................................................................TCGGAAATTTTGCGCTTGGTCC.......................2270.1410000000010
........................................................................................................................................................................................................................TTTGCGCTTGGTCCTGATC..................1970.1410100000000
.....................................................................................................................................................................................................................AATTTTGCGCTTGGTCCTGATCTCT...............2570.1410000000010
...........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGCTCT...........................2380.1310000000010
..............................................................................................................................................................................................................ATTCGGAAATTTTGCGCTTG...........................2080.1310100000000
...............................................................................................................................................................................................................TTCGGAAATTTTGCGCTTG...........................1980.1310000000010
............................................................................................................................................................................................................GAATTCGGAAATTTTGCGCT.............................2080.1310100000000
............................................................................................................................................................................................................GAATTCGGAAATTTTGCGCTC............................2180.1311000000000
........................................................................................................................................................................................................................................ATCTGGGCCGAGTACCACAAG2180.1310100000000
..................................................................................................................................................................................................TGCCGAAAGTGAATTCGGAAA......................................2180.1310000100000
....................................................................................................................................................................................................CCGAAAGTGAATTCGGAAATTTTGC................................2580.1310000001000
.............................................................................................................................................................................................................AATTCGGAAATTTTGCGCTT............................2080.1310100000000
...........................................................................................................................................................................................................TGAATTCGGAAATTTTGCGCTTG...........................2380.1310000001000
......................................................................................................................................................................................................................................TGATCTGGGCCGAGTACCA....1980.1310100000000
........................................................................................................................................................................................................AAGTGAATTCGGAAATTTTGA................................2180.1310000000010
.........................................................................................................................................................................................................AGTGAATTCGGAAATTTTG.................................1980.1310000000010
............................................................................................................................................................................................................GAATTCGGAAATTTTGCGCTTG...........................2280.1310100000000
...............................................................................................................................................................................................................TTCGGAAATTTTGCGCTTGGTC........................2280.1310100000000
..............................................................................................................................................................................................................ATTCGGAAATTTTGCGCTTT...........................2080.1310000001000
....................................TGCTGTGGCCAA-TTTTTTCCGAGT................................................................................................................................................................................................24160.1320200000000
......................................................................................................................................................................................................................................TGATCTGGGCCGAGTACCACA..2180.1310100000000
.................................TGTTGCTGTGGCCAA-TTTTTTCCG...................................................................................................................................................................................................24200.1020200000000
........................GAAATTTGTTGTTGCTGTGG.................................................................................................................................................................................................................20200.1020110000000
.........................AAATTTGTTGTTGCTGTGGCCAA-TT..........................................................................................................................................................................................................25200.1020000000200
TGCGTCAGCTGCTTACACCAAAACG....................................................................................................................................................................................................................................25200.1020100001000
...................................................................TTAGGTTGGGTTAAAATAAAATT-AT................................................................................................................................................................25200.1020110000000
..........................AATTTGTTGTTGCTGTGGCC...............................................................................................................................................................................................................20200.1020200000000
..............................TGTTGTTGCTGTGGCCAA-TTTTTTCC....................................................................................................................................................................................................26200.1020000000020
....................AAACGAAATTTGTTGTTGCTGTGG.................................................................................................................................................................................................................24200.1020000000020
................................TTGTTGCTGTGGCCAA-TTTTTTCCGAGTC...............................................................................................................................................................................................29150.0710100000000
......................................................TCCGAGTCAAATTTTAGGTTG..................................................................................................................................................................................21160.0610100000000
......................................................TCCGAGTCAAATTTTAGGTTGGG................................................................................................................................................................................23160.0610100000000
.....................................................TTCCGAGTCAAATTTTAGGTTGG.................................................................................................................................................................................23160.0610000010000
.................................TGTTGCTGTGGCCAA-TTTTTTCCGAGT................................................................................................................................................................................................27160.0610100000000
............................................................TCAAATTTTAGGTTGGGTTA.............................................................................................................................................................................20170.0610100000000
..............................................AA-TTTTTTCCGAGTCAAATTT.........................................................................................................................................................................................21170.0610100000000
..................................................................................ATAAAATT-ATTTATAAAGAAAGC...................................................................................................................................................23200.0510100000000
.........TGCTTACACCAAAACGAAATTTG.............................................................................................................................................................................................................................23200.0510100000000
....................................................................TAGGTTGGGTTAAAATAAAATT-ATT...............................................................................................................................................................25200.0510100000000
TGCGTCAGCTGCTTACACCAAAA......................................................................................................................................................................................................................................23200.0510000000010
....................................................................TAGGTTGGGTTAAAATAAAATT-A.................................................................................................................................................................23200.0510000000010
........CTGCTTACACCAAAACGAAAT................................................................................................................................................................................................................................21200.0510100000000
....................................................................TAGGTTGGGTTAAAATAAAATT-..................................................................................................................................................................22200.0510100000000
.........................................................................TGGGTTAAAATAAAATT-ATTTATAAA.........................................................................................................................................................26200.0510000000100
...........................ATTTGTTGTTGCTGTGGCC...............................................................................................................................................................................................................19200.0511000000000
.............TACACCAAAACGAAATTTGTTG..........................................................................................................................................................................................................................22200.0510100000000
...................AAAACGAAATTTGTTGTTGCTGTGGC................................................................................................................................................................................................................26200.0510100000000
.............TACACCAAAACGAAATTTGTTGTTGCTGT...................................................................................................................................................................................................................29200.0510010000000
.................................TGTTGCTGTGGCCAA-TTTTTTCCGA..................................................................................................................................................................................................25200.0510100000000
..........GCTTACACCAAAACGAAATTTGTTGT.........................................................................................................................................................................................................................26200.0510100000000
........................................................................TTGGGTTAAAATAAAATT-ATTTA.............................................................................................................................................................23200.0510100000000
..............................TGTTGTTGCTGTGGCCAA-TT..........................................................................................................................................................................................................20200.0510000001000
....................................TGCTGTGGCCAA-TTTTTTCC....................................................................................................................................................................................................20200.0510100000000
...........................ATTTGTTGTTGCTGTGGCCAA-............................................................................................................................................................................................................21200.0510100000000
....................AAACGAAATTTGTTGTTGCTG....................................................................................................................................................................................................................21200.0510100000000
...............CACCAAAACGAAATTTGTTGTTGCTG....................................................................................................................................................................................................................26200.0510100000000
droPer2
TGCGTCAGCTGCTTACACCAAAACGAAATTTGTTGTTGCTGTGGCCAA-TTTTTTCCGAGTCAAATTTTAGGTTGGGTTAAAATAAAATT-ATTTATAAAGAAAGCACAAGTTAAATTACCCTGATATAGGTATCAAGTTT--------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................TGTTGCTGTGGCCAA-TTTTTTCCGAG.................................................................................................................................................................................................26200.60120101001
.................................TGTTGCTGTGGCCAA-TTTTTTCCGAGT................................................................................................................................................................................................2750.402110000
.................................TGTTGCTGTGGCCAA-TTTTTTCCG...................................................................................................................................................................................................24200.306060000
.............................................CAA-TTTTTTCCGAGTCAAATTTTAGGT....................................................................................................................................................................................2750.201000001
.........TGCTTACACCAAAACGAAATTTGTTGT.........................................................................................................................................................................................................................27200.102020000
............TTACACCAAAACGAAATTTGTTGTTGCT.....................................................................................................................................................................................................................28200.051010000
.............................................................................................................AGTTAAATTACCCTGATATAGGC.........................................................................................................................23200.051001000
.................................................................................................AAAGAAAGCACAAGTTAAATTACCC...................................................................................................................................25200.051010000
..............ACACCAAAACGAAATTTGTTGTTGCTG....................................................................................................................................................................................................................27200.051010000
................................................................................................TAAAGAAAGCACAAGTTAAATTACCCTG.................................................................................................................................28200.051010000
.................CCAAAACGAAATTTGTTGTTGCTG....................................................................................................................................................................................................................24200.051010000
..................CAAAACGAAATTTGTTGTTGCTG....................................................................................................................................................................................................................23200.051100000
................................................................................................TAAAGAAAGCACAAGTTAAATTAC.....................................................................................................................................24200.051010000
......................ACGAAATTTGTTGTTGCTGT...................................................................................................................................................................................................................20200.051010000
.............TACACCAAAACGAAATTTGTTGTTG.......................................................................................................................................................................................................................25200.051010000
.................................TGTTGCTGTGGCCAA-TTTTTTCCGAGA................................................................................................................................................................................................27200.051010000
..CGTCAGCTGCTTACACCAAAACGAAATT...............................................................................................................................................................................................................................28200.051010000
........................GAAATTTGTTGTTGCTGTGG.................................................................................................................................................................................................................20200.051010000
.................................TGTTGCTGTGGCCAA-TTTTTTCC....................................................................................................................................................................................................23200.051010000
droWil2
CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTAATGTGAATTCAACCATTTTGCGCAAGGTTCTCACCTGGGCCCATTATCACAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................GCAAGGTTCTCACCTGGGCCC...........2112.00220000
.T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTAATGTGAATTCAACC.......................................2011.00101000
.........................................................................................................................................................................................................TGTGAATTCAACCATTTTGCGCAAG...........................2520.50101000
............................................................................................................................................................................................................GAATTCAACCATTTTGCGCAAG...........................2220.50100100
droVir3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAATGTGAATTCGACAATTTTGAGAAAAGTGTTGACCTGGGCCAACTATCACAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................AATTTTGAGAAAAGTGTTGACCTGGGC.............2711.001000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AATTTTGAGAAAAGTGTTGACCTGGG..............2611.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................AAGTGTTGACCTGGGCCAACTA.......2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GAGAAAAGTGTTGACCTGGGC.............2111.001000000001000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAAGTGTTGACCTGGGCCAA..........2011.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAATGTGAATTCAACAATATTGAGAAAGGTGTTGACTTGGGCCACCTATCACAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................TGTTGACTTGGGCCACCTATCACAAG2611.001000010
droGri2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAATGTAAATTCGACAATTTTGCGAAAGGTTCTGACGTGGGCCAATTATCACAAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAACGTCAACTCGACCATCCTACGCAAGGTCCTGATCTGGGCCCATTACCACAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................CGAACGTCAACTCGACCATCCTAC................................2411.001010000
............................................................................................................................................................................................................CAACTCGACCATCCTACGCAAG...........................2211.001010000
..................................................................................................................................................................................................................................GTCCTGATCTGGGCCCATTACCACAA.2611.001010000
..............................................................................................................................................................................................................................CAAGGTCCTGATCTGGGCCCATTACC.....2611.001010000
..........................................................................................................................................................................................................................TACGCAAGGTCCTGATCTG................1911.001100000
..........................................................................................................................................................................................................................TACGCAAGGTCCTGATCTGG...............2011.001100000
..................................................................................................................................................................................................................GACCATCCTACGCAAGGTCCTG.....................2211.001100000
......................................................................................................................................................................................................................................TGATCTGGGCCCATTACCA....1911.001100000
.....................................................................................................................................................................................................................CATCCTACGCAAGGTCCTGATCTG................2411.001100000
.........................................................................................................................................................................................................................CTACGCAAGGTCCTGATCTG................2011.001001000
...................................................................................................................................................................................................GCCGAACGTCAACTCGACCATCCT..................................2411.001000001
droBip1
TT-ATCGGTCGCTC--ACCAAAACGAAAATTGTTGTTGCCGACGGCAA-AATTTTAT-ATCCAAATTTGAGGTGGGGTCAGAAATTACTTGTTTTAAAAAATAATTACAAGCCTAATTGATCTTCTAGAGATCTTA--------------------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droKik1
CG---------------CCAAAACGAGAAAACTGGTTGAACATGGCAA-AATTGTTGTTGTCAAATCTGAGGTGGGGTCAGAAATAAATT-TTTTATAAAATAACTACATGCCAGAATGATCTTATGGTGGTGT-----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTTATCGGCCCCAT--AGCAAAACGAAAGTTGTTGTTGCCGACGGCAAATATTTTATGTATG-AAATCAAGATGGTGTCAGAAAAGAATT-ATTTAAAAAGTAAATACGAATTAGATTGACCTACTAATGATGTGA------------------------------------------------------------------------------------------------------------------AATSizeHit CountTotal NormTotal
No Reads
droEle1
CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAACTCGGCCATTTTGAAAAAGGTACTGATTTGGGCCAAGCACCATCAGSizeHit CountTotal NormTotal
No Reads
droRho1
CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCCACGATCCTTCGCAAGGTCCTCACCTGGGCCCATTACCACAAGSizeHit CountTotal NormTotal
No Reads
droBia1
CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAACGTGAACTCGACGATCCTGCGCAAGGTGCTCACCTGGGCCCACTACCACAAGSizeHit CountTotal NormTotal
No Reads
droTak1
CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAACTCGGAGATTCTTCGTAAAGTACTCACCTGGGCTCAATACCACAAGSizeHit CountTotal NormTotal
No Reads
droEug1
CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCAATGTAAACTCCACCATTCTTCGCAAGGTCCTAACCTGGGCCCATTACCACAAGSizeHit CountTotal NormTotal
No Reads
dm3
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCGACGATTCTTCGCAAGGTGCTTACCTGGGCTCACTACCACAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................GATTCTTCGCAAGGTGCTTACCTG................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAGGTGCTTACCTGGGCTCACTACCAC...2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAGGTGCTTACCTGGGCTCA..........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................ACGATTCTTCGCAAGGTGCTT.....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................CTTCGCAAGGTGCTTACCTGGGCTC...........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GATTCTTCGCAAGGTGCTTACCT.................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAGGTGCTTACCTGGGCTC...........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TTCTTCGCAAGGTGCTTACCTGG...............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTCGACGATTCTTCGCAAGGTGCT......................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................TTCGCAAGGTGCTTACCTGGGCTC...........2412.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................ACCTGGGCTCACTACCACA..1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GCTTACCTGGGCTCACTACCACA..2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................CCCAATGTGAATTCGACGATTT...................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................AATGTGAATTCGACGATTC...................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................CCCAATGTGAATTCGACGATTCTTCGCA.............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TTCTTCGCAAGGTGCTTACCT.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GATTCTTCGCAAGGTGCTT.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GACGATTCTTCGCAAGGTGCTTA....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TCGACGATTCTTCGCAAGGTGCTTACC..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TCTTCGCAAGGTGCTTACCTGGGCT............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................TACCTGGGCTCACTACCACAA.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CCAATGTGAATTCGACGATT....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................TCGCAAGGTGCTTACCTGGG..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAGGTGCTTACCTGGGCTCAC.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................CTTCGCAAGGTGCTTACCTGGGCTCAC.........2711.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCGACGATTCTTC................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAGGTGCTTACCTGGGCTCG..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCGACG.......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................CAATGTGAATTCGACGATTC...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GACGATTCTTCGCAAGGTG........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GATTCTTCGCAAGGTGCTTACCTGG...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TCGACGATTCTTCGCAAGGTGCA......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................TTCGCAAGGTGCTTACCTGGGCTCACTA.......2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TGCTTACCTGGGCTCACTACCACA..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TACCTGGGCTCACTACCAC...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTCGACGATTCTTCGCAAGGTGCTTA....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TGTGAATTCGACGATTCTTCGCAAGG..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................AATGTGAATTCGACGATTCTT.................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CGACGATTCTTCGCAAGGTATC......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCGACGATCCTTCGCAAGGTGCTTACCTGGGCGCACTACCACAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................AATGTGAATTCGACGATCCTTC................................2211.00100010000000000000
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCGACGATCCT..................................2511.00100000000010000000
.......................................................................................................................................................................................................................TCCTTCGCAAGGTGCTTACCTGGGC.............2511.00100100000000000000
droSec2
T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTGAATTCGACGATCCTTCGCAAGGTGCTTACCTGGGCGCACTACCACAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................TTCGACGATCCTTCGCAAGGTGCT......................2411.0010001
.................................................................................................................................................................................................................CGACGATCCTTCGCAAGGT.........................1911.0010010
..................................................................................................................................................................................................................GACGATCCTTCGCAAGGTGCT......................2111.0010010
.......................................................................................................................................................................................................AATGTGAATTCGACGATCCTTCGCAA............................2611.0011000
droYak3
TACTTCAACCCCTT--ACCAAATCGTAAATTGTTGTTGCCGACGGCAA-CATTTTGTTTGTCAAATCTGAGGTGGGGTCAAAAATATATG-TTTTATAAAATAA-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................TCGTAAATTGTTGTTGCCGACGGC...............................................................................................................................................................................................................24150.671008200000000
.......................CGTAAATTGTTGTTGCCGACGGCAA-CA..........................................................................................................................................................................................................27110.09101000000000
......................TCGTAAATTGTTGTTGCCGACGGCAA-............................................................................................................................................................................................................26150.07101000000000
......................TCGTAAATTGTTGTTGCCGACGG................................................................................................................................................................................................................23150.07101000000000
......................TCGTAAATTGTTGTTGCCGACGGCA..............................................................................................................................................................................................................25150.07101000000000
..........................AAATTGTTGTTGCCGACGGCAA-CA..........................................................................................................................................................................................................24170.06101000000000
............TT--ACCAAATCGTAAATTGTTGTTGCC.....................................................................................................................................................................................................................26170.06101000000000
....................................................TTTGTTTGTCAAATCTGAGG.....................................................................................................................................................................................20180.06100100000000
......................TCGTAAATTGTTGTTGCCGAC..................................................................................................................................................................................................................21200.05100100000000
droEre2
CT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCCAATGTCAACTCGACGATCCTCCGCAAGGTGCTTACCTGGGCCCACTACCACAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................CTCGACGATCCTCCGCAAGGTGCTTA....................2611.0011000000
...................................................................................................................................................................................................................ACGATCCTCCGCAAGGTGCT......................2011.0010000100

Generated: 05/18/2015 at 06:22 AM