ID:

dps_3201

 Coordinate:

XR_group6:13176384-13176534 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.2 -18.1 -17.9

Flybase annnotation

exon [dpse_GLEANR_13497:3]; CDS [Dpse\GA23965-cds]; intron [Dpse\GA23965-in]

Repeatable elements

NameClassFamilyStrand
(CGGA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCGCAATGAAAATGCTCGTGGACACGGAGCGGGAGGAGGCCCTGAATCTGGTACGTAAATTAAAAAACCATGACAACGATCGACGAGACGGACGGACGGACTGACGGACGGACCGAGTGCCGTTGCCGAAATGTAGTGCAATTAATCGGGTTAATCATTGTGCGTGCCCCTATAGAAACTTATTGATTATTGATCGATTCTATGTCTGCTTTTCCTTCGTTCCCTCGCAACCCTCCAAATGCTGACTATTG
****************************************************************************....(((((..((((.((..((......))..))..))..))..)))))(((((((........)))..)))).............***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body		 SRR902010
ovaries
 GSM444067
head
 GSM343916
embryo
 SRR902012
CNS imaginal disc
............TGCTCGTGGACACGGAGCGGGAGGAG..................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.............GCTCGTGGACACGGAGCGGG.......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................TAATCGGGTTAATCATTGTG......................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................CGATCGACGAGACGGACGGACGGAC...................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0
..............CTCGTGGACACGGAGCGGGA......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
...................GGACACGGAGCGGGAGGA...................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................ACGGACTGACGGACGGACCG........................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................GACGAGACGGACGGACGG........................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TGTCTGCTTTTCCTTCGTTCC............................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................GACGAGACGGACGGACGGAC...................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................ATGTAGTGCGGTTGATCGGGT.................................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0
................................................................AAACCATGACAACGATCGACG...................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................ACGGACTGACGGACGGACCGA....................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................TGTAGTGCAATTAATCGGGTT................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
.................GTGGACACGGAGCGGGAGGA...................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................TCTGCTTTTCCTTCGTTCCCT.......................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................CCATGACAACGATCGACGAGACGGAC.............................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
..........AATGCTCGTGGACACGGAGCG............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0
...................GGACACGGAGCGGGAGGAGGC................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
....................GACACGGAGCGGGAGGAGGC................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
................CGTGGACACGGAGCGGGAGGAGGC................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
................CGTGGACACGGAGCGGGAGGA...................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................CTGACGGACGGACCGAGTGCC.................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................................................TAATCGGGTTAGTCATTGTG......................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................TTCGTTCCCTCGCAACCCTCC............... 21 0 1 1.00 1 1 0 0 0 0 0 0
..........GATGCTCGTGGACACGGAGC............................................................................................................................................................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0 0
..........................................................................AACGATCGACGAGACGGAC.............................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................TTAAAAAACCATGACAACGATCGACGAGA................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................GGGTTAATCATTGTGCGTGCC................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................AAAAAGCTTGACAACCATCGAC....................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 0 1 0
.............................................................................................................................................CTAATCAGGTTAGTCATTG........................................................................................... 19 3 16 0.44 7 7 0 0 0 0 0 0
............................................................................................CGGACGGACTGACGGACGGA........................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0
.....................................................................................AGACGGACGGACGGACTGACGG................................................................................................................................................ 22 0 4 0.25 1 0 1 0 0 0 0 0
......................................................................................GACGGACGGACGGACTGAC.................................................................................................................................................. 19 0 14 0.14 2 0 0 0 0 0 0 2
......................................................................................GACGGACGGACGGACTGACGG................................................................................................................................................ 21 0 9 0.11 1 1 0 0 0 0 0 0
............................................................................................................................................................GTTATGCGTGCGCCTATAG............................................................................ 19 3 10 0.10 1 1 0 0 0 0 0 0
............................................................................................CGGACGGACTGACGGACGT............................................................................................................................................ 19 1 17 0.06 1 0 0 1 0 0 0 0
..........................................................................................GACGGCCGGACTGACGGGC.............................................................................................................................................. 19 2 20 0.05 1 0 0 0 0 0 1 0
.........AAATGGTGGTGGACAAGGAG.............................................................................................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

CGCGTTACTTTTACGAGCACCTGTGCCTCGCCCTCCTCCGGGACTTAGACCATGCATTTAATTTTTTGGTACTGTTGCTAGCTGCTCTGCCTGCCTGCCTGACTGCCTGCCTGGCTCACGGCAACGGCTTTACATCACGTTAATTAGCCCAATTAGTAACACGCACGGGGATATCTTTGAATAACTAATAACTAGCTAAGATACAGACGAAAAGGAAGCAAGGGAGCGTTGGGAGGTTTACGACTGATAAC
*****************************************************************************************....(((((..((((.((..((......))..))..))..))..)))))(((((((........)))..)))).............**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 M059
embryo
 V112
male body
............................................................................................................GCCTGGCTCACGGCGACGGCT.......................................................................................................................... 21 1 1 2.00 2 2 0 0 0
..............................................................................................................CTGGCTCACGGCAACGGCTTT........................................................................................................................ 21 0 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................AGGGAGCGTTGGGAGGTTTA........... 20 0 1 1.00 1 1 0 0 0
...................................CTCCGGGACTTAGACCATGC.................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.............................................................................................................................................................AACACGCACGGGGATATCTT.......................................................................... 20 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................CGAAAAGGAAGCAAGGGAGC........................ 20 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................................AAGCAAGGGAGCGTTGGGAGG............... 21 0 1 1.00 1 1 0 0 0
..................................................................TGGTACTGTTGCTAGCTGCTC.................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
..............................................................................................................CTGGCTCACGGCGACGGCTTT........................................................................................................................ 21 1 1 1.00 1 1 0 0 0
...............................CCTCCTCCGGGACTTAGA.......................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
...................................................................................GCTCTGCCTGCCTGCCTGACT................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................................TTGGGAGGTTTACGACTGGT... 20 1 1 1.00 1 1 0 0 0
...........................................................................................................................................................GTAACACGCACGGGGATAT............................................................................. 19 0 1 1.00 1 1 0 0 0
......................................................................................................................CGGCAACGGCTTTACATCA.................................................................................................................. 19 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................................CGTTGGGAGGTTTACGACTGA.... 21 0 1 1.00 1 1 0 0 0
................................................ACCATGCCATTTATTTTTTGG...................................................................................................................................................................................... 21 3 2 0.50 1 0 1 0 0
....................................................................................................................CGCGGCAACGGCTTTACAGT................................................................................................................... 20 3 4 0.25 1 1 0 0 0
................................................................................................................TGCTCACGACAACGGCTGTA....................................................................................................................... 20 3 8 0.13 1 0 1 0 0
...........................................................................................................................................................................................................................AAGGGAGGGTTGATAGGTTT............ 20 3 8 0.13 1 1 0 0 0
.............................................................................................................CCTGACTCACGGCAACGGGA.......................................................................................................................... 20 3 10 0.10 1 0 0 1 0
............................................................................................................................................TAATTAGGTCGATTAGTAAC........................................................................................... 20 3 11 0.09 1 0 0 0 1
..........................................................................................CTGCCTGCCTGACTGTCTGC............................................................................................................................................. 20 1 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:13176334-13176584 + dps_3201 GCGCAATGAAAATGCTC---GTGGACACGGAGCGGGAGGAGGCCCTGAATCTGGTACGTAA------------------------------------------------------------------ATTA--AAAAACCATGACAACGAT--CGA----------------CGAGACGGAC---GGAC--GGACTGACGGACGGACCGAGTGCCGTT-GCCGA-AATGT----------------------------------------------AGTGCAATTAATCGGGTTA--A------------------TC----------ATTGTGCGTGCCCCTATA---GAAACTTATTGATTATTGATCGAT---TCT---A--TGT----------CT---GCTTTTCCTT----------CGT----------------T-CCC----------------T-CGCAACCCTCC---------AAATG---C-TG--ACTATTG
droWil2 scf2_1100000004729:2291842-2291905 + CAACCATGAAAATGCTG---GTGGATACAGAGCGGGAGGAAGCGCTCAACTTGGTATGTGTGTAA-AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:5078819-5079085 - dvi_18376 GCACTATGAAAATGCTTGTCGTTGACACCGAGCGAGAGGAGGCTCTAAATTTGGTATGTGTGC-------------------------------------------------------------GTAATTA--AAAATCCATGACAGCGGCCCAATCG--------------------------------------------------------------CCCAAAATGCATTGC---AATTAATCAAACGTGCGAAATGTG---TGCGTGTGTG----TCA---------------ATGTCTGCGTGTGTGTGTGTCTGTGTGTGTGT------------GTGTT---ATAGCTAATTGTTTATTGATTGTC---TGT--GT--T---TT----TTTCT---ATCT---CA----------C-----------CCAAAAAAA-AAATCTC------------G----C---GCG---------AACTCG---C-CAATATTATTG
droMoj3 scaffold_6680:3458773-3459007 - GCACAATGAAAATGCTTGTCGTTGACACCGAGCGAGAGGAGGCTCTAAATTTGGTATGTATGTGT-GCAAATATGTGTGC-----------------------AA-------GTGTTTGTGTGTGTAATTA--AAAATCCAT-----------------------------------------------T--------------------------CG-GCCAAAAATGCAATGT---AATTAATCAA--GTG-----------------------------------TGAAGTG-----------------------------T--------ATGTGCTTT-A-------AGTTAATTGATTATTGATTGTT---T--------TGTCTCAT--TTCAT---GTTCTTCCTT----------TCTTCTCTCACCG-------------------------------------------------AAATG---C-CGATATTATTG
droGri2 scaffold_15110:9887209-9887429 + GCACCATGAAAATGCTTGTCGTTGACACCGAGAGAGAGGAGGCTCTAAATTTGGTATGTCTCTGT-GTA---------------------ATT--------ACAAATGTCTTTCA------------------AAAGCCTACG-----------------------------------------------------------------------------CCAAGAATGCAATGCAGCAATTAATCAA-------------------------------------------------C--------------------A------------------------GCG----TAGCTAATTGATTATTGATTGTC---TTCGTCTCATTATTTGTTTTTGTT---CTCT-TCCCA---------C-------------------T-TCT----------------CTTGC-------TACTTTGCACGATTG---C-CGATATTATTG
droAna3 scaffold_13337:7176447-7176710 + dan_2472 GCGCGATGAAAATGCTC---GCGGACACAGAGCGGGAGGAGGCTCTCAATTTGGTGAGTAATTA-----------------ACTGACATAGAGGAAAATTC--------G---TCAGTCCAAAACTGAATCCAAAAAACCATGACAACGGCATCCAAA---------CAACCCAAAAACAATAACAAAAGTT--------GCCTCTGCCACCGTTGTGGGCCAA--------------------------------A-A-----------------------ATTAAC----CAA--C--------------------TT----TATAA--------------GTG---TTGA--AATTGATTATCGATTCAT---G--------TGTTCTGT--TTCCT---GTTTTTCCA----------C------------------------------------------------------------CCACACTC--T-CGATTTTATTG
droBip1 scf7180000396418:182030-182291 + GCGCGATGAAAATGCTC---GCGGACACAGAGCGGGAGGAGGCTCTCAATTTGGTGAGTAATTA-----------------ACTGACATAGAGGAAAATTT--------G---TCAATCCAAGACTGAATCCAAAAAACCATGACAACGGCATCCAAA---------CAACCCAAAAACAATAACAAAAGTG--------GCCTCAGCCACCGTTGTTGGCCAA--------------------------------A-A------------------------TTAA----CCAA--C--------------------TA----T------------------ATAGTGC--TCAAATTGATTATCGATTCTT---G--------TGTTCTGT--TTCCT---GTTTTTCCA----------CCC----------------AC-T-------------------------------------------CTC--T-CGATTTTATTG
droKik1 scf7180000302486:900677-900951 + GC---ATGAAAATGCTC---GCGGACACGGAGCGGGAAGAAAACCTGAATTTAGTAAGTTCAATT-A--------------ACAAAAAAAAA---------------G--AAGAAA----AAAACGAAGAACCAAAAACCATGACAACGGCGAC---------------------AAACAA-AACAATCG--------------------------TT-GCCAA--------------------------------A-AAT---GCG--------AAATGCGATTAACTA-----------------------------------------------------ACA---TTG-CTAATTGATTATCAATTTTTTTCGGT--TG--TGTTCTCTTTTTCCT---GTTTTCCTCA-TTTTC---CGC-------ACCC----CG---C-TCCCGCTCCAACGCCGC-----------CGTCGCCGCCGCCCAC--TGTGCCGTTATTG
droFic1 scf7180000454107:519743-519992 + GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAATTTGGTGAGTTTTTAG-A-C---------------------GTT--------TAAAA------------------GTCAATG--CGAATCCATGACAACGGCATCGCAG---------CAA--CAAAAGCAATAACAACCG--------------------------TT-GCCAA--------------------------------A-AAG------------------GCGATTAATTGGACTA---------------------TCTT----T------------------GTA---TTGACTAATTGATTATCGATTATC---GCT--AA--CGTTCTGTTCTTCCTGCCT-TTTTCCTG---------C-------------------T-TTT----------------C-----------CGCCGCCCCCGCAAAC--T-CGATTTTATTG
droEle1 scf7180000491255:3484208-3484472 + GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAATTTGGTGAGTTTTTGCGATG---------------------GCT--------TAAAC---------------------TATG--TGAATCCATGACAACGGCATTGCAG---------CAA--CAAAAACAATAACAACCGT-------------------------TT-GCCAA--------------------------------A-AAA---------------AACGCGATTAATTCGACCC---------------------TTTG----T------------------ATA---TTGGCTAATTGATTATCGATTATC---GGTCTCT--TGTTCTGTTTTTCAT---GCTTTTCCTGCTTTTC---CCC----------------ACTTTT----------------C-----------CGTCGCCCCCGCACACTCT-CGGTATTATTG
droRho1 scf7180000779902:9883-10132 - GCGCGATGAAAATGCTC---GCGGACACAGAGCGTGAGGAAGCCCTCAATTTGGTAAGTTT-CCG-ATG---------------------TCT--------AAAAC---------------------TATG--TGAATCCATGACAACGGCATTGTAG---------CAA--CAAAAACAATAACAACCG--------------------------TT-GCCAA--------------------------------A-AAAA-----------------GCGATTAATTCGACCC---------------------TCTT----T------------------ATA---TTGACTAATTGATTATCGATTATC---GGTGTTTTTCGTTCTGTTTTTCCT---GCTTTTCCCA---------C-------------------T-TTT----------------C-----------CGCCGCCCCCGCACAC--T-CGTTTTTATTG
droBia1 scf7180000302428:6404367-6404662 + GCGCGATGAAAATGCTA---GCGGACACGGAGCGTGAGGAGGCCCTCAACCTGGTGAGTTTTCCG-GACGCCTTT--------------CGCAGCTCTTTCG-----------CGACTGCGACTGCGAGTG--CGAATCCATGACAACCGCATCGCAG---------CCC--CAAAAACAATAACAAGCC--------------------------AG-GCGAA--------------------------------A-AGCA---CAGGC-CATG----GCAATTAATGCGACCC--C------------------TCTG----C------------------ATA---CTGACTAATTGATTATCGACCACC---GCTGATA--TGCTCTGTTCTTCCC---GCCCCCCCCG---------AA---------------CCAC-CCACCCG------------C----C---GCGCACCGCCCCCGCGCAC--T-CGGCTTTATTG
droTak1 scf7180000415429:206403-206689 - GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACTTGGTGAGTTTTTCG-GCTGCTTTTCGATCAGCAGCAGAAGC-GAAGATTT-------------------GATAGCGAAT---TGAATCCATGACAACGGCATCGCGG---------CCC--CAAAAACAATAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAGA-----------------GCGATTAATTGGACTG--C------------------TCCG----T------------------CTA---TTGACTAATTGATTATCGATTATC---GCT--GA--TGTTCTGTTT-TCCT---GCT--TCCTGCTTTTCCCGCC---------------CCAC-CCA----------------C-----------CGCCGCCGCCGCCCAC--T-CGCCGTTATTG
droEug1 scf7180000409711:290270-290520 - GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAATTTGGTGAGTTTTCTG-ATA---------------------GTT--------TAAAA-CCGAT------------GTGAATG--TGAATCCATGACAACGGCGTACCAG---------CAA--CAAAAACAATAACAACCG--------------------------TT-GCCAA--------------------------------A-AAA------------------GCGATTAATTGGGCTTCAC------------------TTTA----T------------------ATA---TTGACTAATTGATTATCGATTGTC---GCT--GA--TGTTCTATTCTTCCT---GCTTTTCT-----------------------------------A----------------C-----------CGCCGCCCCCGCACAC--T-CGACTTTATTG
dm3 chr3L:17044505-17044783 + GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACCTGGTGAGTTTTCCG-ATC---------------------GTT--------AAAAATGCGCTGCTA-----------GTTG--CGAGTCCATGACAACGGCATCGCAGCAGCAGCAGCAA--CAAAAACAATAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAAA--GCAG---CATAGAAAACGATTAATTGGTCCC--C--------------------TT----T------------------ATG---TTGACTAATTGATTATCGATTGCC---GCC--GC--TGCCCCGTTCTTCCT---GCTTTTCCGA---------CCG----------------AC-TTT----------------C-----------CACCGCCCCCGCACA---T-CGCCTTTATTG
droSim2 3l:16627385-16627665 + dsi_23123 GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACCTGGTGAGTTTTCCG-ATC---------------------GTT--------GAAAATGCGCTGCTA-----------GTTG--CGAGTCCATGACAACGGCATCGCAGCAGCAGCAGCAA--CAAAAACAATAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAAAGAGCAG---CATAGAAAACGATTAATTGGACCC--C--------------------TT----T------------------ATG---TTGACTAATTGATTATCGATTGCC---GCC--GC--TGCCCCGTTCTTCCT---GCTTTTCCGG---------CCG----------------AC-TTT----------------C-----------CACCGCCCCCGCACA---T-CGCCTTTATTG
droSec2 scaffold_0:9104865-9105142 + GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACCTGGTGAGTTTTCCG-ATC---------------------GTT--------GAAAATGCGCTGCTA-----------GTTG--CGAGTCCATGACAACGGCATCGCAGCA---GCAGCAA--CAAAAACAATAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAAAGAGCAG---CATAGAAAACGATTAATTGGACCC--C--------------------TT----T------------------ATG---TTGACTAATTGATTATCGATTGCC---GCC--GC--TGCCCCGTTCTTCCT---GCTTTTCCGG---------CCG----------------AC-TTT----------------C-----------CACTGCCCCCGCACA---T-CGCCTTTATTG
droYak3 3L:17028607-17028879 - GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACCTGGTAAGTTTTCCG-ATC---------------------GCT--------AGAAAAGCGATGCGA------TTGCCATTG--CGAGTCCATGACAACGGCATCGCAC---------CAA--CAAAAACAATAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAA---GCAG---CATAAAAAACGATTAATTGAACC---C--------------------TC----T------------------ATG---TTGACTAATTGATTATCGATTGCC---GCT--GA--TGTTCTGTTCTTCCT---GCTTTTCCTG---------CCG----------------AC-TTT----------------C-----------CACCGCCCCCGCACA---T-CGCTGTTATTG
droEre2 scaffold_4784:16798005-16798283 - GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACCTGGTGAGTTTTCCG-ATC---------------------GTT--------GAAAATGCATTGCGATTGTGATTGCGATTG--CGAGTCCATGACAACGACATCGCAC---------CAA--CAAAAACAATAACAAGTG--------------------------CT-GCCAA--------------------------------A-AAA---GCAG---CATTAAAAACGATTAATTGAACCC--C--------------------TC----T------------------ATG---TTGACTAATTGATTATCGATTGCC---GCT--GA--TGCTCTGTTCTTCCT---GCTTTCCT-G---------CCG----------------AC-TTT----------------C-----------CACCGCCCCCGCACA---T-CGCTGTTATTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCGCAATGAAAATGCTC---GTGGACACGGAGCGGGAGGAGGCCCTGAATCTGGTACGTAA------------------------------------------------------------------ATTA--AAAAACCATGACAACGAT--CGA----------------CGAGACGGAC---GGAC--GGACTGACGGACGGACCGAGTGCCGTT-GCCGA-AATGT----------------------------------------------AGTGCAATTAATCGGGTTA--A------------------TC----------ATTGTGCGTGCCCCTATA---GAAACTTATTGATTATTGATCGAT---TCT---A--TGT----------CT---GCTTTTCCTT----------CGT----------------T-CCC----------------T-CGCAACCCTCC---------AAATG---C-TG--ACTATTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............TGCTC---GTGGACACGGAGCGGGAGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.............GCTC---GTGGACACGGAGCGGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................TAATCGGGTTA--A------------------TC----------ATTGTG............................................................................................................................................................................2011.0010100000000
...................................................................................................................................................CGAT--CGA----------------CGAGACGGAC---GGAC--GGAC.......................................................................................................................................................................................................................................................................................................................2511.0010000000100
..............CTC---GTGGACACGGAGCGGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................GGACACGGAGCGGGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................................................................................................................................................................................AC--GGACTGACGGACGGACCG.........................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................GA----------------CGAGACGGAC---GGAC--GG.........................................................................................................................................................................................................................................................................................................................1811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................TGT----------CT---GCTTTTCCTT----------CGT----------------T-CC............................................................2111.0010100000000
..........................................................................................................................................................GA----------------CGAGACGGAC---GGAC--GGAC.......................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................AAACCATGACAACGAT--CGA----------------CG............................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................AC--GGACTGACGGACGGACCGA........................................................................................................................................................................................................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................TGT----------------------------------------------AGTGCAATTAATCGGGTT....................................................................................................................................................................................................................2111.0010100000000
....................GTGGACACGGAGCGGGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................T----------CT---GCTTTTCCTT----------CGT----------------T-CCC----------------T-.........................................2111.0010100000000
..........................................................................................................................................CCATGACAACGAT--CGA----------------CGAGACGGAC---.................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..........AATGCTC---GTGGACACGGAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010000
......................GGACACGGAGCGGGAGGAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................GACACGGAGCGGGAGGAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000010
................C---GTGGACACGGAGCGGGAGGAGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000010
................C---GTGGACACGGAGCGGGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................CTGACGGACGGACCGAGTGCC...................................................................................................................................................................................................................................................................................................2111.0010000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TT----------CGT----------------T-CCC----------------T-CGCAACCCTCC---------.....................2111.0010100000000
.................................................................................................................................................AACGAT--CGA----------------CGAGACGGAC---.................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................TTA--AAAAACCATGACAACGAT--CGA----------------CGAGA.........................................................................................................................................................................................................................................................................................................................................2911.0010100000000
.................................................................................................................................................................................................................................................................................................GGGTTA--A------------------TC----------ATTGTGCGTGCC......................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................C---GGAC--GGACTGACGGACGGA............................................................................................................................................................................................................................................................................................................2040.2510100000000
..............................................................................................................................................................................AGACGGAC---GGAC--GGACTGACGG.................................................................................................................................................................................................................................................................................................................2240.2510000000010
...............................................................................................................................................................................GACGGAC---GGAC--GGACTGAC...................................................................................................................................................................................................................................................................................................................19140.1420000000002
...............................................................................................................................................................................GACGGAC---GGAC--GGACTGACGG.................................................................................................................................................................................................................................................................................................................2190.1110100000000
.....................................................................................................................................................................................C---GGAC--GGACTGACGGACGT.............................................................................................................................................................................................................................................................................................................19170.0610000001000
droWil2
CAACCATGAAAATGCTG---GTGGATACAGAGCGGGAGGAAGCGCTCAACTTGGTATGTGTGTAA-AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................ATACAGAGCGGGAGGAAGCGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300210
......................GGATACAGAGCGGGAGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.........................TACAGAGCGGGAGGAAGCGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..................................GGAGGAAGCGCTCAACTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
........................ATACAGAGCGGGAGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
....................GTGGATACAGAGCGGGAGGAAGCGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
........................ATACAGAGCGGGAGGAAGCGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
......................GGATACAGAGCGGGAGGAAGCGCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.........AAATGCTG---GTGGATACAGAGCGGGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100
.......GAAAATGCTG---GTGGATACAGAGCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
...............TG---GTGGATACAGAGCGGGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
....CATGAAAATGCTG---GTGGATACAGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
droVir3
GCACTATGAAAATGCTTGTCGTTGACACCGAGCGAGAGGAGGCTCTAAATTTGGTATGTGTGC-------------------------------------------------------------GTAATTA--AAAATCCATGACAGCGGCCCAATCG--------------------------------------------------------------CCCAAAATGCATTGC---AATTAATCAAACGTGCGAAATGTG---TGCGTGTGTG----TCA---------------ATGTCTGCGTGTGTGTGTGTCTGTGTGTGTGT------------GTGTT---ATAGCTAATTGTTTATTGATTGTC---TGT--GT--T---TT----TTTCT---ATCT---CA----------C-----------CCAAAAAAA-AAATCTC------------G----C---GCG---------AACTCG---C-CAATATTATTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................CGTTGACACCGAGCGAGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003000003000000000000000000000000000000000000000000000000000000000
.......GAAAATGCTTGTCGTTGACACCGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000100000000000000000000000000000000000000000000000000000001000
........AAAATGCTTGTCGTTGACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000001000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................ATCAAACGTGCGAAATGTG---TGCGT............................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.................................GAGAGGAGGCTCTAAATTTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............GCTTGTCGTTGACACCGAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
..............CTTGTCGTTGACACCGAGCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........AAATGCTTGTCGTTGACACCGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000001000000000000000000000000000
.........AAATGCTTGTCGTTGACACCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000010000
....................GTTGACACCGAGCGAGAGGAGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
...............................GCGAGAGGAGGCTCTAAATTTTCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TGTCTGCGTGTGTGTGTG..............................................................................................................................................................................................18200.102000000002000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGTGTGTGTCTGTGTGTGTGT------------G....................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TGTCTGCGTGTGTGTGTGT.............................................................................................................................................................................................19200.051000010000000000000000000000000000000000000000000000000000000000
droMoj3
GCACAATGAAAATGCTTGTCGTTGACACCGAGCGAGAGGAGGCTCTAAATTTGGTATGTATGTGT-GCAAATATGTGTGC-----------------------AA-------GTGTTTGTGTGTGTAATTA--AAAATCCAT-----------------------------------------------T--------------------------CG-GCCAAAAATGCAATGT---AATTAATCAA--GTG-----------------------------------TGAAGTG-----------------------------T--------ATGTGCTTT-A-------AGTTAATTGATTATTGATTGTT---T--------TGTCTCAT--TTCAT---GTTCTTCCTT----------TCTTCTCTCACCG-------------------------------------------------AAATG---C-CGATATTATTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................TGACACCGAGCGAGAGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...................CGTTGACACCGAGCGAGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
GCACCATGAAAATGCTTGTCGTTGACACCGAGAGAGAGGAGGCTCTAAATTTGGTATGTCTCTGT-GTA---------------------ATT--------ACAAATGTCTTTCA------------------AAAGCCTACG-----------------------------------------------------------------------------CCAAGAATGCAATGCAGCAATTAATCAA-------------------------------------------------C--------------------A------------------------GCG----TAGCTAATTGATTATTGATTGTC---TTCGTCTCATTATTTGTTTTTGTT---CTCT-TCCCA---------C-------------------T-TCT----------------CTTGC-------TACTTTGCACGATTG---C-CGATATTATTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................GACACCGAGAGAGAGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
.................................GAGAGGAGGCTCTAAATTTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101
.......................GACACCGAGAGAGAGGAGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
...............................................................................................................................................................................................................................AGAATGCAATGCAGCAAT.........................................................................................................................................................................................................................................................................1811.00110
droAna3
GCGCGATGAAAATGCTC---GCGGACACAGAGCGGGAGGAGGCTCTCAATTTGGTGAGTAATTA-----------------ACTGACATAGAGGAAAATTC--------G---TCAGTCCAAAACTGAATCCAAAAAACCATGACAACGGCATCCAAA---------CAACCCAAAAACAATAACAAAAGTT--------GCCTCTGCCACCGTTGTGGGCCAA--------------------------------A-A-----------------------ATTAAC----CAA--C--------------------TT----TATAA--------------GTG---TTGA--AATTGATTATCGATTCAT---G--------TGTTCTGT--TTCCT---GTTTTTCCA----------C------------------------------------------------------------CCACACTC--T-CGATTTTATTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................G---TTGA--AATTGATTATCGG..........................................................................................................................................1812.002000002
.............................................................................................GAAAATTC--------G---TCAGTCCAAAAC.............................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................................................................CCTCTGCCACCGTTGTGGGCC............................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................AGTT--------GCCTCTGCCACCGTTGTG................................................................................................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................T--------GCCTCTGCCACCGTTGTGGGCCAA--------------------------------..........................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................TATAA--------------GTG---TTGA--AATTGATT...............................................................................................................................................2011.001000010
..............................................................................................................................GAATCCAAAAAACCATGACAACGGC...................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................................................................................................................................................................................AAGTT--------GCCTCTGCCACCGTTGTGGGCC............................................................................................................................................................................................................................................................................................2711.001100000
....................................................................................GACATAGAGGAAAATTC--------G---TCA......................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....................................................................................................................................................................................TAACAAAAGTT--------GCCTCTGC..........................................................................................................................................................................................................................................................................................................1911.001010000
.............................................................................................GAAAATTC--------G---TCAGTCCAAAACTGAA.........................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................................................................................................................................................ATAACAAAAGTT--------GCCTCTGC..........................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................AAGTT--------GCCTCTGCCACCGTTGT.................................................................................................................................................................................................................................................................................................2211.001100000
..............................................................................................................................................GACAACGGCATCCAAA---------CAACC..............................................................................................................................................................................................................................................................................................................................................2111.001010000
................................................................................................................................................................................................................CACCGTTGTGGGCCAA--------------------------------A-A-----------------------ATTAAC----CAA--C--------------------T...........................................................................................................................................................................................2911.001100000
............................................................................................................................................................................................AGTT--------GCCTCTGCCACCGTT...................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCA----------C------------------------------------------------------------CCACACTC--T-CGAT.......2111.001100000
............................................................................................................................................................AA---------CAACCCAAAAACAATAACAAAAGT...........................................................................................................................................................................................................................................................................................................................2611.001000010
..........................................................................................................................................................................................AAAGTT--------GCCTCTGCCACCGTTG..................................................................................................................................................................................................................................................................................................2211.001100000
................................................................................................................................................CAACGGCATCCAAA---------CAACCCAAAAACAA.....................................................................................................................................................................................................................................................................................................................................2811.001000010
................................................................................................................................................CAACGGCATCCAAA---------CAACCCAA...........................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................................................................................................................................................................................TT--------GCCTCTGCCACCGTTGTGGGCC............................................................................................................................................................................................................................................................................................2411.001100000
....................................................................................GACATAGAGGAAAATTC--------G---TC.......................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...................................................................................................................................CAAAAAACCATGACAACGGCATCCAAA---------C..................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................................AAAATTC--------G---TCAGTCCAAAACTGAAT........................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....GATGAAAATGCTC---GCGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.............................................................................................................................................................................AAAAACAATAACAAAAGT...........................................................................................................................................................................................................................................................................................................................1830.331010000
droBip1
GCGCGATGAAAATGCTC---GCGGACACAGAGCGGGAGGAGGCTCTCAATTTGGTGAGTAATTA-----------------ACTGACATAGAGGAAAATTT--------G---TCAATCCAAGACTGAATCCAAAAAACCATGACAACGGCATCCAAA---------CAACCCAAAAACAATAACAAAAGTG--------GCCTCAGCCACCGTTGTTGGCCAA--------------------------------A-A------------------------TTAA----CCAA--C--------------------TA----T------------------ATAGTGC--TCAAATTGATTATCGATTCTT---G--------TGTTCTGT--TTCCT---GTTTTTCCA----------CCC----------------AC-T-------------------------------------------CTC--T-CGATTTTATTGSizeHit CountTotal NormTotal
No Reads
droKik1
GC---ATGAAAATGCTC---GCGGACACGGAGCGGGAAGAAAACCTGAATTTAGTAAGTTCAATT-A--------------ACAAAAAAAAA---------------G--AAGAAA----AAAACGAAGAACCAAAAACCATGACAACGGCGAC---------------------AAACAA-AACAATCG--------------------------TT-GCCAA--------------------------------A-AAT---GCG--------AAATGCGATTAACTA-----------------------------------------------------ACA---TTG-CTAATTGATTATCAATTTTTTTCGGT--TG--TGTTCTCTTTTTCCT---GTTTTCCTCA-TTTTC---CGC-------ACCC----CG---C-TCCCGCTCCAACGCCGC-----------CGTCGCCGCCGCCCAC--TGTGCCGTTATTGSizeHit CountTotal NormTotal
No Reads
droFic1
GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAATTTGGTGAGTTTTTAG-A-C---------------------GTT--------TAAAA------------------GTCAATG--CGAATCCATGACAACGGCATCGCAG---------CAA--CAAAAGCAATAACAACCG--------------------------TT-GCCAA--------------------------------A-AAG------------------GCGATTAATTGGACTA---------------------TCTT----T------------------GTA---TTGACTAATTGATTATCGATTATC---GCT--AA--CGTTCTGTTCTTCCTGCCT-TTTTCCTG---------C-------------------T-TTT----------------C-----------CGCCGCCCCCGCAAAC--T-CGATTTTATTGSizeHit CountTotal NormTotal
No Reads
droEle1
GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAATTTGGTGAGTTTTTGCGATG---------------------GCT--------TAAAC---------------------TATG--TGAATCCATGACAACGGCATTGCAG---------CAA--CAAAAACAATAACAACCGT-------------------------TT-GCCAA--------------------------------A-AAA---------------AACGCGATTAATTCGACCC---------------------TTTG----T------------------ATA---TTGGCTAATTGATTATCGATTATC---GGTCTCT--TGTTCTGTTTTTCAT---GCTTTTCCTGCTTTTC---CCC----------------ACTTTT----------------C-----------CGTCGCCCCCGCACACTCT-CGGTATTATTGSizeHit CountTotal NormTotal
No Reads
droRho1
GCGCGATGAAAATGCTC---GCGGACACAGAGCGTGAGGAAGCCCTCAATTTGGTAAGTTT-CCG-ATG---------------------TCT--------AAAAC---------------------TATG--TGAATCCATGACAACGGCATTGTAG---------CAA--CAAAAACAATAACAACCG--------------------------TT-GCCAA--------------------------------A-AAAA-----------------GCGATTAATTCGACCC---------------------TCTT----T------------------ATA---TTGACTAATTGATTATCGATTATC---GGTGTTTTTCGTTCTGTTTTTCCT---GCTTTTCCCA---------C-------------------T-TTT----------------C-----------CGCCGCCCCCGCACAC--T-CGTTTTTATTGSizeHit CountTotal NormTotal
No Reads
droBia1
GCGCGATGAAAATGCTA---GCGGACACGGAGCGTGAGGAGGCCCTCAACCTGGTGAGTTTTCCG-GACGCCTTT--------------CGCAGCTCTTTCG-----------CGACTGCGACTGCGAGTG--CGAATCCATGACAACCGCATCGCAG---------CCC--CAAAAACAATAACAAGCC--------------------------AG-GCGAA--------------------------------A-AGCA---CAGGC-CATG----GCAATTAATGCGACCC--C------------------TCTG----C------------------ATA---CTGACTAATTGATTATCGACCACC---GCTGATA--TGCTCTGTTCTTCCC---GCCCCCCCCG---------AA---------------CCAC-CCACCCG------------C----C---GCGCACCGCCCCCGCGCAC--T-CGGCTTTATTGSizeHit CountTotal NormTotal
No Reads
droTak1
GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACTTGGTGAGTTTTTCG-GCTGCTTTTCGATCAGCAGCAGAAGC-GAAGATTT-------------------GATAGCGAAT---TGAATCCATGACAACGGCATCGCGG---------CCC--CAAAAACAATAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAGA-----------------GCGATTAATTGGACTG--C------------------TCCG----T------------------CTA---TTGACTAATTGATTATCGATTATC---GCT--GA--TGTTCTGTTT-TCCT---GCT--TCCTGCTTTTCCCGCC---------------CCAC-CCA----------------C-----------CGCCGCCGCCGCCCAC--T-CGCCGTTATTGSizeHit CountTotal NormTotal
No Reads
droEug1
GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAATTTGGTGAGTTTTCTG-ATA---------------------GTT--------TAAAA-CCGAT------------GTGAATG--TGAATCCATGACAACGGCGTACCAG---------CAA--CAAAAACAATAACAACCG--------------------------TT-GCCAA--------------------------------A-AAA------------------GCGATTAATTGGGCTTCAC------------------TTTA----T------------------ATA---TTGACTAATTGATTATCGATTGTC---GCT--GA--TGTTCTATTCTTCCT---GCTTTTCT-----------------------------------A----------------C-----------CGCCGCCCCCGCACAC--T-CGACTTTATTGSizeHit CountTotal NormTotal
No Reads
dm3
GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACCTGGTGAGTTTTCCG-ATC---------------------GTT--------AAAAATGCGCTGCTA-----------GTTG--CGAGTCCATGACAACGGCATCGCAGCAGCAGCAGCAA--CAAAAACAATAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAAA--GCAG---CATAGAAAACGATTAATTGGTCCC--C--------------------TT----T------------------ATG---TTGACTAATTGATTATCGATTGCC---GCC--GC--TGCCCCGTTCTTCCT---GCTTTTCCGA---------CCG----------------AC-TTT----------------C-----------CACCGCCCCCGCACA---T-CGCCTTTATTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................TGCGCTGCTA-----------GTTG--CGAGTCC..............................................................................................................................................................................................................................................................................................................................................................................21113.00130000000000000000000000000000000000000000000000000000010001100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001210000001000000000000000000100000000000010000000000000000000000000000000000000000000000000000000001000001000000
......................................................................................................................................................CATCGCAGCAGCAGCAGCAA--CA............................................................................................................................................................................................................................................................................................................................................2226.00120000000000000000000000000000010000000000000000000000000000000000000000000000000000000200001000010000000000000000000000000000000000000000000000100000000000000000000000000010000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000001000000000000100000000000
.........................................................................................................ATGCGCTGCTA-----------GTTG--CGAG.................................................................................................................................................................................................................................................................................................................................................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000010000000000102000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................ATGCGCTGCTA-----------GTTG--CGAGTCC..............................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100100000000000000000000000000000001000000000000000000000000000000000000000000000001000000000000000000000000
.........................CACGGAGCGTGAGGAAGCCCTCAACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000
................................................................................................................................................CAACGGCATCGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACGGAGCGTGAGGAAGCCCTCAACCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000
.........................CACGGAGCGTGAGGAAGCCCTCAACCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000020000000000000
.........................................................................................................ATGCGCTGCTA-----------GTTG--CGA..................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATGCGCTGCTA-----------GTTG--CGAGT................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001000
.....................................................GTGAGTTTTCCG-ATC---------------------GTT--------AAAAATGC.............................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACGGAGCGTGAGGAAGCCCTCAACCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAAA--GCAG---CA.........................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................AATGCGCTGCTA-----------GTTG--CGAGTC...............................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000
......................................................................................................................................................CATCGCAGCAGCAGCAGCAA--C.............................................................................................................................................................................................................................................................................................................................................2122.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000001100000000000000000000000000000000000000000
......TGAAAATGCTC---GCGGACACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACACGGAGCGTGAGGAAGCCCTCAACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000
......................................................................................................................................................CATCGCAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................1941.7570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000012000000000000000000000000000000000000000000000000001000
......................................................................................................................................................CATCGCAGCAGCAGCAGCAA--..............................................................................................................................................................................................................................................................................................................................................2021.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000001000
..........................ACGGAGCGTGAGGAAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ACGGCATCGCAGCAGCAGCAG...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............TGCTC---GCGGACACGGAGCGTGAGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATGCGCTGCTA-----------GTTG--CGAGA................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................CGCTGCTA-----------GTTG--CGAGTCCATG...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...........ATGCTC---GCGGACACGGAGCGTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................C---GCGGACACGGAGCGTGAGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCTC---GCGGACACGGAGCGTGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........AAAATGCTC---GCGGACACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................AACGGCATCGCAGCAGCAG......................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................AAATGCGCTGCTA-----------GTTG--CGAGTCCA.............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............CTC---GCGGACACGGAGCGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................G--CGAGTCCATGACAACGG....................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
........................ACACGGAGCGTGAGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............GCTC---GCGGACACGGAGCGTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................................................................................................AAATGCGCTGCTA-----------GTTG--CGAGT................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AATGCGCTGCTA-----------GTTG--CGAGT................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........AATGCTC---GCGGACACGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................GGAGCGTGAGGAAGCCCTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GATGAAAATGCTC---GCGGACACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTC---GCGGACACGGAGCGTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TTCCG-ATC---------------------GTT--------AAAAATGC.............................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.............GCTC---GCGGACACGGAGCGTGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................CGGCATCGCAGCAGCAGCAG...................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................GTGAGTTTTCCG-ATC---------------------GTT--------AAAAATGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ATAGAAAACGATTAATTG........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................ATTGCC---GCC--GC--TGCCCCGTTCT..............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GGACACGGAGCGTGAGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................CATCGCAGCAGCAGCAGCAA--CAA...........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.............GCTC---GCGGACACGGAGCGTGAGGAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................GGAGCGTGAGGAAGCCCTCAACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................ATCGCAGCAGCAGCAGCAA--CA............................................................................................................................................................................................................................................................................................................................................2131.0030000000000000000000000000000100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CACGGAGCGTGAGGAAGCCCTCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................GCTA-----------GTTG--CGAGTCCATG...........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
...........ATGCTC---GCGGACACGGAGCGTGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CACGGAGCGTGAGGAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....GATGAAAATGCTC---GCGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........ATGCTC---GCGGACACGGAGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................GCTGCTA-----------GTTG--CGAGTCCA.............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................ATGCGCTGCTA-----------GTTG--CGAGTC...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................AGTCCATGACAACGGCATCGC..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..........AATGCTC---GCGGACACGGAGCGTGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
GCGCGATGAAAATGCTC---G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................CGGCATCGCAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAAA--GCAG---C..........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................TGCTA-----------GTTG--CGAGTCCATGACAACGG....................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................ACACGGAGCGTGAGGAAGCCCTCAACCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........ATGCTC---GCGGACACGGAGCGTGAGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................CATGACAACGGCATCGCAGC...........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................TTCCG-ATC---------------------GTT--------AAAAATGCGCTGC........................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
........................ACACGGAGCGTGAGGAAGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............TC---GCGGACACGGAGCGTGAGGAAGCCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ATGCTC---GCGGACACGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................C---GCGGACACGGAGCGTGAGGAAGCCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................AATGCGCTGCTA-----------GTTG--CGAG.................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................ATGCGCTGCTA-----------GTTG--CGAGTCT..............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................C---GCGGACACGGAGCGTGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................CGGAGCGTGAGGAAGCCCTCAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TGCGCTGCTA-----------GTTG--CGAGT................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................A--CAAAAACAATAACAAGCG--------------------------T.................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GAAAATGCTC---GCGGACACGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CACGGAGCGTGAGGAAGCCCTCAACCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................ACACGGAGCGTGAGGAAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................GTGAGTTTTCCG-ATC---------------------GTT--------AAAA.................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AATGCGCTGCTA-----------GTTG--CGAGTCC..............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................GACACGGAGCGTGAGGAAGCCCTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................................................TG---TTGACTAATTGATTATCGA..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TATCGATTGCC---GCC--GC--TGCCCCGTT................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AACAAGCG--------------------------TT-GCCAA--------------------------------A-AAA.....................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CAGCAGCAGCAA--CAAAAACA......................................................................................................................................................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................TTATCGATTGCC---GCC--GC--TTT......................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CAGCAGCAGCAA--CAAAAAC.......................................................................................................................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CATCGCAGCAGCAGCAGCAT--..............................................................................................................................................................................................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................GCAGCAGCAGCAA--CAAAAA........................................................................................................................................................................................................................................................................................................................................19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................GCAGCAGCAGCAGCAA--CAAA..........................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACCTGGTGAGTTTTCCG-ATC---------------------GTT--------GAAAATGCGCTGCTA-----------GTTG--CGAGTCCATGACAACGGCATCGCAGCAGCAGCAGCAA--CAAAAACAATAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAAAGAGCAG---CATAGAAAACGATTAATTGGACCC--C--------------------TT----T------------------ATG---TTGACTAATTGATTATCGATTGCC---GCC--GC--TGCCCCGTTCTTCCT---GCTTTTCCGG---------CCG----------------AC-TTT----------------C-----------CACCGCCCCCGCACA---T-CGCCTTTATTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................TTCCG-ATC---------------------GTT--------GAAAATGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000000000000000
..........................................................TTTTCCG-ATC---------------------GTT--------GAAAATGCGCTGC........................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000020000000000
............................................................TTCCG-ATC---------------------GTT--------GAAAATG..............................................................................................................................................................................................................................................................................................................................................................................................................1812.00220000000000000000
...........ATGCTC---GCGGACACGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
......................................................................................................................................................CATCGCAGCAGCAGCAGCAA--CA............................................................................................................................................................................................................................................................................................................................................2231.00300000300000000000
.........................................................................................................ATGCGCTGCTA-----------GTTG--CGAGT................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
................................CGTGAGGAAGCCCTCAACCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.....................................................................................................GAAAATGCGCTGCTA-----------GTTG--CG...................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
.................................................................................................................................................................................................................................................................................................GGACCC--C--------------------TT----T------------------ATG---TTGACTAATT...................................................................................................................................................2311.00100010000000000000
.........................CACGGAGCGTGAGGAAGCCCTCAACCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000100000
......................................................................................................................................................CATCGCAGCAGCAGCAGCAA--C.............................................................................................................................................................................................................................................................................................................................................2131.00300003000000000000
...........................................................TTTCCG-ATC---------------------GTT--------GAAAATGCG............................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GACTAATTGATTATCGATTGCC---GCC--.............................................................................................................................2511.00100000100000000000
......................................................................................................................................................CATCGCAGCAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................18100.90900000900000000000
.......................................................................................................................................................ATCGCAGCAGCAGCAGCAA--CA............................................................................................................................................................................................................................................................................................................................................2130.33100000000000100000
......................................................................................................................................................CATCGCAGCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................19100.10110000000000000000
droSec2
GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACCTGGTGAGTTTTCCG-ATC---------------------GTT--------GAAAATGCGCTGCTA-----------GTTG--CGAGTCCATGACAACGGCATCGCAGCA---GCAGCAA--CAAAAACAATAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAAAGAGCAG---CATAGAAAACGATTAATTGGACCC--C--------------------TT----T------------------ATG---TTGACTAATTGATTATCGATTGCC---GCC--GC--TGCCCCGTTCTTCCT---GCTTTTCCGG---------CCG----------------AC-TTT----------------C-----------CACTGCCCCCGCACA---T-CGCCTTTATTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................CATCGCAGCA---GCAGCAA--CAAA..........................................................................................................................................................................................................................................................................................................................................2111.0010001
..............................................................................................................................................................................................................................................................................................................................................................TGACTAATTGATTATCGATTGC......................................................................................................................................2211.0010001
.............GCTC---GCGGACACGGAGCGTGAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
..........................................................................................GTT--------GAAAATGCGCTGCTA-----------GTT........................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
......TGAAAATGCTC---GCGGACACGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
................C---GCGGACACGGAGCGTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
......................GGACACGGAGCGTGAGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
GCGCGATGAAAATGCTC---G.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
.......................................................................................................................................................................................................................................................................................................................................................ATG---TTGACTAATTGATTATCG...........................................................................................................................................2111.0011000
..........................ACGGAGCGTGAGGAAGCCCTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
............................GGAGCGTGAGGAAGCCCTCAACCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
......................................................................................................................................................CATCGCAGCA---GCAGCAA--CAA...........................................................................................................................................................................................................................................................................................................................................2040.2510010
droYak3
GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACCTGGTAAGTTTTCCG-ATC---------------------GCT--------AGAAAAGCGATGCGA------TTGCCATTG--CGAGTCCATGACAACGGCATCGCAC---------CAA--CAAAAACAATAACAAGCG--------------------------TT-GCCAA--------------------------------A-AAA---GCAG---CATAAAAAACGATTAATTGAACC---C--------------------TC----T------------------ATG---TTGACTAATTGATTATCGATTGCC---GCT--GA--TGTTCTGTTCTTCCT---GCTTTTCCTG---------CCG----------------AC-TTT----------------C-----------CACCGCCCCCGCACA---T-CGCTGTTATTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......GAAAATGCTC---GCGGACACGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.......................GACACGGAGCGTGAGGAAGCCCTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...........................CGGAGCGTGAGGAAGCCCTCAACCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........................................................................................................................................................................................CAAGCG--------------------------TT-GCCAA--------------------------------A-AAA---GCAG---C..........................................................................................................................................................................................................................................2211.00100000010000
........AAAATGCTC---GCGGACACGGAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
droEre2
GCGCGATGAAAATGCTC---GCGGACACGGAGCGTGAGGAAGCCCTCAACCTGGTGAGTTTTCCG-ATC---------------------GTT--------GAAAATGCATTGCGATTGTGATTGCGATTG--CGAGTCCATGACAACGACATCGCAC---------CAA--CAAAAACAATAACAAGTG--------------------------CT-GCCAA--------------------------------A-AAA---GCAG---CATTAAAAACGATTAATTGAACCC--C--------------------TC----T------------------ATG---TTGACTAATTGATTATCGATTGCC---GCT--GA--TGCTCTGTTCTTCCT---GCTTTCCT-G---------CCG----------------AC-TTT----------------C-----------CACCGCCCCCGCACA---T-CGCTGTTATTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................CACGGAGCGTGAGGAAGCCCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020100100
.................................GTGAGGAAGCCCTCAACCTGGTGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.......GAAAATGCTC---GCGGACACGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
....................................................................................................................................................................................................................................................................................................................................................................ATTGATTATCGATTGCC---GCT--G............................................................................................................................2111.0010000010

Generated: 05/18/2015 at 06:18 AM