ID:

dps_3200

 Coordinate:

XR_group6:13165084-13165234 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.6 -21.6

Flybase annnotation

CDS [Dpse\GA23963-cds]; exon [dpse_GLEANR_13495:2]; intron [Dpse\GA23963-in]

No Repeatable elements found

mature
  1. XR_group6:13164794-13164817 +
  2. dps_3200  XR_group6:13165113-13165136 +
star
  1. XR_group6:7081372-7081394 +
  2. XR_group6:7084270-7084292 +
  3. XR_group6:12164696-12164718 +
  4. XR_group6:12165339-12165361 +
  5. XR_group6:12165658-12165680 +
  6. XR_group6:12467235-12467257 +
  7. XR_group6:12467559-12467581 +
  8. XR_group6:12468207-12468229 +
  9. XR_group6:12468855-12468877 +
  10. XR_group6:12469179-12469201 +
  11. XR_group6:12470302-12470324 +
  12. XR_group6:12472397-12472419 +
  13. XR_group6:12473704-12473726 +
  14. XR_group6:12474352-12474374 +
  15. XR_group6:12475324-12475346 +
  16. XR_group6:12476307-12476329 +
  17. dps_3200  XR_group6:13165177-13165199 +
  18. Unknown_singleton_134:63-85 +
  19. Unknown_singleton_134:702-724 +
  20. Unknown_singleton_134:3574-3596 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAAAAAAGGATATCCATTCCATCACGATTTTCGCAAAAAATCATGATGGTTACATCATTAAATTTGCCAAAAATCGGCCTCATTTTCGTGGTCGAGATTTTTATGCCAATCGACAGGCTGGGTCCTCACGATACTAGGAGACAAGGTCCTTCGCCGATCTGGCCCTATTAGGCTGAGATATAGCCTTCCGAGCCTTCCCAGGATCTGCGGCTCAAGCTTTCGGCTAACGCCGCGTCACCAGGAGACAGCCA
*******************************************************************************..........((((.((((............(((..((((..((.(((..........)))))..))))..)))...))))))))..************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 SRR902011
testis
 V112
male body
....................................................................................................................................................................................................CCCAGTAACGGCGGCTCAAGC.................................. 21 3 1 1.00 1 1 0 0 0 0
............................TTTCGCAAAAAATCATGATGGTTACAT.................................................................................................................................................................................................... 27 0 20 0.70 14 14 0 0 0 0
...............................................................................TCATTTTCGTGGTCGAGATTTTTA.................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0
.......................................................................................................TGCCAATCGACGGGCTGGGTC............................................................................................................................... 21 1 8 0.13 1 1 0 0 0 0
..............................................................................................................................................AAGGTACTCCGCCCATCTGGC........................................................................................ 21 3 8 0.13 1 1 0 0 0 0
..................................................................................................................................ATACTGCGAGACAAGGTCCTT.................................................................................................... 21 2 9 0.11 1 1 0 0 0 0
........................................................................................................................................................................TAGGTAGAGATATGGCCTTC............................................................... 20 3 10 0.10 1 1 0 0 0 0
....AAAGGATATCCATTCCATCA................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
...............................................................TTGCCAAAAATCGGCCTCATT....................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................AGGTCCTTCGCCGATCTGGCCCT..................................................................................... 23 0 20 0.05 1 1 0 0 0 0
.....AAGGATATCCATTCCATCACGATTT............................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
...............................................GGTTACATCATTAAATTTGCC....................................................................................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0
..................................................TACATCATTAAATTTGCCAAAAATCGG.............................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0
...............................................................................TCATTTTCGTGGTCGAGAT......................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0
......................................................TCATTAAATTTGCCAAAAATC................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................TTAGAGACACGGTCCTTCG.................................................................................................. 19 3 20 0.05 1 0 0 0 0 1
...............................................................................................................................................AGGTCCTTCGCCGATCTGG......................................................................................... 19 0 20 0.05 1 1 0 0 0 0
..........................................................TAAATTTGCCAAAAATCGGCCTCATT....................................................................................................................................................................... 26 0 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

CTTTTTTCCTATAGGTAAGGTAGTGCTAAAAGCGTTTTTTAGTACTACCAATGTAGTAATTTAAACGGTTTTTAGCCGGAGTAAAAGCACCAGCTCTAAAAATACGGTTAGCTGTCCGACCCAGGAGTGCTATGATCCTCTGTTCCAGGAAGCGGCTAGACCGGGATAATCCGACTCTATATCGGAAGGCTCGGAAGGGTCCTAGACGCCGAGTTCGAAAGCCGATTGCGGCGCAGTGGTCCTCTGTCGGT
*************************************************************************************..........((((.((((............(((..((((..((.(((..........)))))..))))..)))...))))))))..******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M059
embryo
 M022
male body		 SRR902010
ovaries
 GSM444067
head
..............................................................................................................................................................................................TCGGAAGGGTCTGAGAAGCC......................................... 20 3 2 108.50 217 105 110 1 1 0 0
.............................................................................................................................................................................................CTCGGAAGGGTCTGAGAAGCC......................................... 21 3 1 37.00 37 13 24 0 0 0 0
..............................................................................................................................................................................................TCGGAAGGGTCTGAGAAGC.......................................... 19 3 20 20.55 411 209 201 1 0 0 0
..............................................................................................................................................TTCCATGAGGCGGGTAGACCG........................................................................................ 21 3 8 4.25 34 16 18 0 0 0 0
...........................................................................................................................................................................................GGCTCGGAAGGGTCTGAGAAGC.......................................... 22 3 1 4.00 4 4 0 0 0 0 0
.............................................................................................................................................................................................CTCGGAAGGGTCTGAGAAGC.......................................... 20 3 4 3.00 12 8 4 0 0 0 0
..............................................................................................................................................................................................TCGGAAGGGTCTGAGAAGCCGA....................................... 22 3 1 3.00 3 2 1 0 0 0 0
..............................................................................................................................................................................................TCGGAAGGGTCCGAGAAGCCAA....................................... 22 3 2 2.00 4 1 3 0 0 0 0
............................................................................................................................................................................................GCTCGGAAGGGTCTGAGAAGCC......................................... 22 3 1 2.00 2 2 0 0 0 0 0
..............................................................................................................................................................................................TCGGAAGGGTCTTAGAAGCCAA....................................... 22 3 1 2.00 2 1 1 0 0 0 0
...........................................................................................................................................................................................GGCTCGGAAGGGTCTGAGA............................................. 19 2 2 2.00 4 4 0 0 0 0 0
..............................................................................................................................................TTCCATGAGGCGGGTAGACC......................................................................................... 20 3 11 1.82 20 11 9 0 0 0 0
..............................................................................................................................................................................................TCGGAAGGGTCCGAGAAGC.......................................... 19 2 2 1.00 2 2 0 0 0 0 0
.............................................................................................................................................................................................CTCGGAAGGGTCCGAGAAGCCAA....................................... 23 3 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................TCGGAAGGGTCTTAGAAGC.......................................... 19 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................ACGGCTCGGAAGGGTCCGA............................................... 19 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................GGCTCGGAAGGGTCTGAGAAG........................................... 21 3 2 1.00 2 2 0 0 0 0 0
.........................................................................................................................................................................................ACGGCTCGGAAGGGTCCGAGAAGC.......................................... 24 3 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................TCGGAAGGGTCCGAGAAGCC......................................... 20 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................CGGCTCGGAAGGGTCCGAGAAGCC......................................... 24 3 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................GGTCTTAGAGGCCGAATTCGAA................................ 22 3 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................GGCTCGGAAGGGTCTGAGAAGCC......................................... 23 3 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................CTCGGAAGGGTCTGAGAAG........................................... 19 3 20 0.40 8 8 0 0 0 0 0
............AGGTAAGGTAGTGCTAAAAGCGTTTT..................................................................................................................................................................................................................... 26 0 20 0.30 6 0 0 0 0 6 0
............................................................................................................................................................................................GCTCGGAAGGGTCTGAGA............................................. 18 2 4 0.25 1 1 0 0 0 0 0
........................................................................................................................................................................................TACGGCTCGGAAGGGTCC................................................. 18 2 4 0.25 1 1 0 0 0 0 0
..............................................................................................................................................................................................TCGGAAGGGTCTGAGATGC.......................................... 19 3 6 0.17 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................CGCACTGGTCCTATGTTGG. 19 3 7 0.14 1 0 0 1 0 0 0
..............................................................................................................................................TTCCATGAGGCGGATAGACC......................................................................................... 20 3 10 0.10 1 0 1 0 0 0 0
..............................................................................................................................................................................................TCGAAAGTGTCCTAGACGTC......................................... 20 3 11 0.09 1 0 0 0 0 0 1
..........................................................................................................................................................................................................TAGAGGCCTAGTTCGAATG.............................. 19 3 12 0.08 1 1 0 0 0 0 0
.............................................................................................................................................TTTCCATGAGGCGGCTAGAC.......................................................................................... 20 3 13 0.08 1 1 0 0 0 0 0
............AGGTAAGGTAGTGCTAAAAGCGTTT...................................................................................................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0 0
.............GGTAAGGTAGTGCTAAAAGCGTTTT..................................................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0
................................................................ACGGTTTTTAGCCGGAGTAAAAGCAC................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
............AGGTGAGGTAGTGCTAAAAGCGTT....................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................................TACGGCTCGGAAGGGTCCGA............................................... 20 3 20 0.05 1 1 0 0 0 0 0
...............TAAGGTAGTGCTAAAAGCGTTT...................................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 1 0
.................................GTTTTTTAGTACTACCAATGTAG................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:13165034-13165284 + dps_3200 GAA---------AAAAG---GATATCCAT-TCCATCAC-GATTTTCGCAAAAAATCATGATGG-TTACATCATTAAATTTGCCAAAAATCGGCCTCATTTTCGTGGTCGAGATTTTTATGCCAATCGACAGGCTGGGTCCTCACGATACTAGGAGACAAGGTCCTTCGCCGATCTGGCCCTATTAGGCTGAGATATAGCCTTCCGAGCCTTCCCAGGATCTGCGGCTCAAGCTTTCGGCTAACGCCGCGTCACCAGGAGACAGCCA
droPer2 scaffold_20:917348-917558 + GAA---------AAAAG---GATATCCAT-TCCATCAC-GATTTTCGCAAAAAATCATGATGG-TTACATCATCCAATTTGCCAAAAATCGGCCTCATTTTCGTGGTCGAGATTTTGGTGCCAATCGACAGGCTGGATCCCCACGATCCTGGGAGACTAGGTCCTTCGCCGATCTGGCCCCGTTTAGCTGAGATATAGCCTTCCGAAGATT---TGGATTTGCACATCA-------------------------------------
droVir3 scaffold_12875:16315917-16316100 + GAA---------AAAGTTTTGATTTTTGACCCGACCCC-GAT-TTTGAAAAAAAACGTGATGT-AACCCCTTGCCATTTTGTCGATTTGGGTCAAAATTTTGGATTTCCTTTTTTTGATGCCAATCGATAGAACTGATCCTTACGAGTCAAAAATGGTATGAAATTTCAAAATCGGACGTTATTTGGCCGAGATAT----------------------------------------------------------------------
droAna3 scaffold_13117:1763161-1763272 - AAAGTTGCTTAAAATCG---GACAATAAA-ATTTTCGCAGATTTTTGCAAAAAATCCTGATGG-TACCCCTTGCAAAAATTTCAAAAATCGGTCGAATTTTTTTTGCC-CGATTTTCA----------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302351:862837-862902 - GAA---------AAAAA---AAT-----------TCGCAATTTTTCGAAAAAAAATGTAAGGGGTTACATCATTAAAATTGTCAAAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GAA---------AAAAG---GATATCCAT-TCCATCAC-GATTTTCGCAAAAAATCATGATGG-TTACATCATTAAATTTGCCAAAAATCGGCCTCATTTTCGTGGTCGAGATTTTTATGCCAATCGACAGGCTGGGTCCTCACGATACTAGGAGACAAGGTCCTTCGCCGATCTGGCCCTATTAGGCTGAGATATAGCCTTCCGAGCCTTCCCAGGATCTGCGGCTCAAGCTTTCGGCTAACGCCGCGTCACCAGGAGACAGCCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................TTTCGCAAAAAATCATGATGG-TTACAT....................................................................................................................................................................................................27200.701401400000000
..............................................................................................TCATTTTCGTGGTCGAGATTTTTA....................................................................................................................................................2420.5010000000100
.............AAAG---GATATCCAT-TCCATCA.....................................................................................................................................................................................................................................20200.0510100000000
..............................................................................TTGCCAAAAATCGGCCTCATT.......................................................................................................................................................................21200.0510100000000
..............................................................................................................................................................AGGTCCTTCGCCGATCTGGCCCT.....................................................................................23200.0510100000000
..............AAG---GATATCCAT-TCCATCAC-GATTT..............................................................................................................................................................................................................................25200.0510100000000
.............................................................GG-TTACATCATTAAATTTGCC.......................................................................................................................................................................................21200.0510010000000
.................................................................TACATCATTAAATTTGCCAAAAATCGG..............................................................................................................................................................................27200.0510100000000
..............................................................................................TCATTTTCGTGGTCGAGAT.........................................................................................................................................................19200.0510100000000
.....................................................................TCATTAAATTTGCCAAAAATC................................................................................................................................................................................21200.0510100000000
..............................................................................................................................................................AGGTCCTTCGCCGATCTGG.........................................................................................19200.0510100000000
.........................................................................TAAATTTGCCAAAAATCGGCCTCATT.......................................................................................................................................................................26200.0510000000010
droPer2
GAA---------AAAAG---GATATCCAT-TCCATCAC-GATTTTCGCAAAAAATCATGATGG-TTACATCATCCAATTTGCCAAAAATCGGCCTCATTTTCGTGGTCGAGATTTTGGTGCCAATCGACAGGCTGGATCCCCACGATCCTGGGAGACTAGGTCCTTCGCCGATCTGGCCCCGTTTAGCTGAGATATAGCCTTCCGAAGATT---TGGATTTGCACATCA-------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................TTTCGCAAAAAATCATGATGG-TTACAT....................................................................................................................................................................................................27200.95190190000
..............................................................................................TCATTTTCGTGGTCGAGATTTTGG....................................................................................................................................................24200.102020000
.........................................................................................................................................................................................................TCCGAAGATT---TGGATTTGCAC.........................................21110.091010000
............................................................................................................................................................................................TGAGATATAGCCTTCCGAAGATT---TGGAT...............................................28200.051010000
..........................CAT-TCCATCAC-GATTTTCGCA.........................................................................................................................................................................................................................21200.051000010
..................................................................................................TTTCGTGGTCGAGATTTTGGTG..................................................................................................................................................22200.051010000
............................................................................................................................TCGACAGGCTGGATCCCCACGATC......................................................................................................................24200.051010000
...............................................................................TGCCAAAAATCGGCCTCA.........................................................................................................................................................................18200.051010000
......................................................................................................GTGGTCGAGATTTTGGTGCCAATCGA..........................................................................................................................................26200.051010000
...............................................................................................CATTTTCGTGGTCGAGATTTTGG....................................................................................................................................................23200.051010000
..................................................................................................TTTCGTGGTCGAGATTTTGGTGCCAA..............................................................................................................................................26200.051010000
droVir3
GAA---------AAAGTTTTGATTTTTGACCCGACCCC-GAT-TTTGAAAAAAAACGTGATGT-AACCCCTTGCCATTTTGTCGATTTGGGTCAAAATTTTGGATTTCCTTTTTTTGATGCCAATCGATAGAACTGATCCTTACGAGTCAAAAATGGTATGAAATTTCAAAATCGGACGTTATTTGGCCGAGATAT----------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................ACGTGATGT-AACCCCTTGCC...............................................................................................................................................................................................20200.70140000000000000000000000000000000140000000000000000000000000000000
..................................................AAAAACGTGATGT-AACCCCTTGC................................................................................................................................................................................................23200.70140010000000000000000000000000013000000000000000000000000000000000
..............................................................................................................................................................ATGAAATTTCAAAATCGGACG.......................................................................................2150.603000000000000000001000000100010000000000000000000000000000000000
...............................................................................................................................ATAGAACTGATCCTTACGAGTCAAA..................................................................................................................25200.408000002000000000000000000600000000000000000000000000000000000000
......................................................ACGTGATGT-AACCCCTTGCCAT.............................................................................................................................................................................................22200.357000000000000000000000000000000070000000000000000000000000000000
...................................................AAAACGTGATGT-AACCCCTTG.................................................................................................................................................................................................21200.306000000000000000000000000000006000000000000000000000000000000000
...................................................AAAACGTGATGT-AACCCCTTGCC...............................................................................................................................................................................................23200.306000000000000000000000000000006000000000000000000000000000000000
..................................................AAAAACGTGATGT-AACCCCTTGCC...............................................................................................................................................................................................24200.204000400000000000000000000000000000000000000000000000000000000000
.......................................................CGTGATGT-AACCCCTTGCCA..............................................................................................................................................................................................20200.204000000000000000000000000000004000000000000000000000000000000000
......................................................................................TTGGGTCAAAATTTTGGATTTCCT............................................................................................................................................................24200.153000000000000000000000000300000000000000000000000000000000000000
...............................................................................................................................ATAGAACTGATCCTTACGAGTC.....................................................................................................................22200.153000000000000000000000000300000000000000000000000000000000000000
.................................................................................................................TTTGATGCCAATCGATAGAACTGAT................................................................................................................................25200.153000000000000000000000000000000000000000300000000000000000000000
......................................................ACGTGATGT-AACCCCTTGCCA..............................................................................................................................................................................................21200.153000000000000000000000000020000000010000000000000000000000000000
....................................................AAACGTGATGT-AACCCCTTG.................................................................................................................................................................................................20200.153000000000000000000000000000003000000000000000000000000000000000
.......................................................CGTGATGT-AACCCCTTGCCATTT...........................................................................................................................................................................................23200.153000000000000000000000000000030000000000000000000000000000000000
................................................................................................................................TAGAACTGATCCTTACGAGTCAAA..................................................................................................................24200.153000000000000000000000000000000000030000000000000000000000000000
.......................................................................................................................................................AAATGGTATGAAATTTCAAAATCGG..........................................................................................2570.141000000000000000000000000100000000000000000000000000000000000000
.................................................AAAAAACGTGATGT-AACCCCTTGCC...............................................................................................................................................................................................25200.102000000000000000000000000100010000000000000000000000000000000000
.....................................................AACGTGATGT-AACCCCTTGCCATTT...........................................................................................................................................................................................25200.102000000000000000000000000000002000000000000000000000000000000000
..................................................AAAAACGTGATGT-AACCCCTTGCCATT............................................................................................................................................................................................27200.102000000000000000000000000000002000000000000000000000000000000000
.......................................................CGTGATGT-AACCCCTTGCCATTTTG.........................................................................................................................................................................................25200.102000000000000000000000000000020000000000000000000000000000000000
........................................................................................................................................ATCCTTACGAGTCAAAAATGGTATGA........................................................................................................26200.102000000000000000000000000100001000000000000000000000000000000000
.................................................AAAAAACGTGATGT-AACCCCTTGCCA..............................................................................................................................................................................................26200.102000000000000000000000000020000000000000000000000000000000000000
.............AAGTTTTGATTTTTGACCCGA........................................................................................................................................................................................................................................21200.102000000000000000000000000000020000000000000000000000000000000000
......................TTTTTGACCCGACCCC-GAT-TT.............................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................TTTTGTCGATTTGGGTCAAAATTTTGG...................................................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................TCCTTTTTTTGATGCCAATCGA..........................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
..................................................AAAAACGTGATGT-AACCCCTTG.................................................................................................................................................................................................22200.051000000000000000000000000001000000000000000000000000000000000000
.......................................................CGTGATGT-AACCCCTTGCCATT............................................................................................................................................................................................22200.051000000000000000000000001000000000000000000000000000000000000000
.................................................................................................TTTTGGATTTCCTTTTTTTGATGCCAAT.............................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................CGATAGAACTGATCCTTACGA........................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................TACGAGTCAAAAATGGTATG.........................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...................................................AAAACGTGATGT-AACCCCTTGCCAT.............................................................................................................................................................................................25200.051000000000000000000000000000000000000001000000000000000000000000
..............................................................................TTGTCGATTTGGGTCAAAATTTTGG...................................................................................................................................................................25200.051000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................TTTGATGCCAATCGATAGAACT...................................................................................................................................22200.051000001000000000000000000000000000000000000000000000000000000000
......................................................ACGTGATGT-AACCCCTTGCCATTTTC.........................................................................................................................................................................................26200.051000000000000000000000000000000100000000000000000000000000000000
.................................................................................TCGATTTGGGTCAAAATTTTGGATTTCC.............................................................................................................................................................28200.051000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................TTGATGCCAATCGATAGAACTGATC...............................................................................................................................25200.051000000000000000000000000000000100000000000000000000000000000000
..................TTGATTTTTGACCCGACCCC-G..................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
..................................................................................CGATTTGGGTCAAAATTTTGGATTTCCT............................................................................................................................................................28200.051000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................ATAGAACTGATCCTTACGAGTCAAAA.................................................................................................................26200.051000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................................GATAGAACTGATCCTTACGAGTCAAA..................................................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
..............................................GAAAAAAAACGTGATGT-AACCCCTTGC................................................................................................................................................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
............................................................................TTTTGTCGATTTGGGTCAAAATTT......................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................ATAGAACTGATCCTTACGAG.......................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
....................................................AAACGTGATGT-AACCCCTTGCCATTTTG.........................................................................................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
............................................................TGT-AACCCCTTGCCATTTTGTCGA.....................................................................................................................................................................................24200.051000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................TCCTTTTTTTGATGCCAAT.............................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000001
.........................................................................................................................CAATCGATAGAACTGATCCTT............................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................ATGCCAATCGATAGAACTG..................................................................................................................................19200.051000000000000000000000000010000000000000000000000000000000000000
................TTTTGATTTTTGACCCGAC.......................................................................................................................................................................................................................................19200.051000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGCCAATCGATAGAACTGATCCTTAC..........................................................................................................................26200.051000000000000000000000000001000000000000000000000000000000000000
..............................CCGACCCC-GAT-TTTGAAAAAAAACGT................................................................................................................................................................................................................26200.051000000000000000000000000000001000000000000000000000000000000000
...................................................AAAACGTGATGT-AACCCC....................................................................................................................................................................................................18200.051000000000000000000000000000000000010000000000000000000000000000
...................TGATTTTTGACCCGACCCC-GA.................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTTTGGATTTCCTTTTTTTGATGCCA...............................................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................GATGCCAATCGATAGAACTGA.................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................TCCTTACGAGTCAAAAATGG.............................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
.................................................AAAAAACGTGATGT-AACCCC....................................................................................................................................................................................................20200.051000000000000000000000000000000100000000000000000000000000000000
...................................................AAAACGTGATGT-AACCCCTTGCCATTTT..........................................................................................................................................................................................28200.051000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................ACTGATCCTTACGAGTCAAAAATGGTAT..........................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
...................................................AAAACGTGATGT-AACCCCTTGC................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
........................................................................................................TTTCCTTTTTTTGATGCCAAT.............................................................................................................................................21200.051000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................TTTTTGATGCCAATCGATAGAACT...................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................................................TGGGTCAAAATTTTGGATTTCCT............................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................TGATGCCAATCGATAGAACTGATCC..............................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................TGATGT-AACCCCTTGCCATTTTGTC.......................................................................................................................................................................................25200.051000000000000000000000000000000010000000000000000000000000000000
................................................................................................................TTTTGATGCCAATCGATAGAACTGATC...............................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................GATGCCAATCGATAGAACTGATCC..............................................................................................................................24200.051000100000000000000000000000000000000000000000000000000000000000
...................................................................................................TTGGATTTCCTTTTTTTGATG..................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
........................................................GTGATGT-AACCCCTTGCCATT............................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
.................................ACCCC-GAT-TTTGAAAAAAAACGTG...............................................................................................................................................................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
droAna3
AAAGTTGCTTAAAATCG---GACAATAAA-ATTTTCGCAGATTTTTGCAAAAAATCCTGATGG-TACCCCTTGCAAAAATTTCAAAAATCGGTCGAATTTTTTTTGCC-CGATTTTCA----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droKik1
GAA---------AAAAA---AAT-----------TCGCAATTTTTCGAAAAAAAATGTAAGGGGTTACATCATTAAAATTGTCAAAAAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 06:24 AM