ID:

dps_3158

 Coordinate:

XR_group6:11776017-11776219 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.0 -18.0 -17.7

Flybase annnotation

exon [dpse_GLEANR_13403:6]; CDS [Dpse\GA20766-cds]; exon [dpse_GLEANR_13403:7]; CDS [Dpse\GA20766-cds]; intron [Dpse\GA20766-in]

Repeatable elements

NameClassFamilyStrand
(ATG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGCGCCCGAAGTGATTGCTCCTCACAATGACAACGCGTGGGTCGATGTGGGTATTGAAGATGAAGATGAGGATGAGGATAATGATGAGGATGAGGATAATGATGATGCTGATGTTGAAATTGATGTCGAGATCAATGGAATTGCCCTGCCAGTTGATGTTGATGACTGCGTAGGCAATTTGTAGTAATAACTGACCATTAATTAATGAACATTTCTCACCAAACAAAAACAAAATCAAACATCACCTCTTCAGATAATACAGCGCAGAGGAAGCGTCAGCGGTACAGCGAAGGCAGCAGCAAC
************************************************************************************************************************************.((((((((((((.((((((((.((....))))))).))))))))))..((((....)))).))))).....................*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M059
embryo
 SRR902012
CNS imaginal disc
 GSM343916
embryo
 GSM444067
head
...............................................................................................................................................................................................................................................................................AGCGTCAGCGGTACAGCGAAGGC......... 23 0 1 2.00 2 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................GTCAGCGGTACAGCGAAGGCAGC...... 23 0 1 1.00 1 0 0 0 0 1 0
.......................................................................................................................................................................................................AATTAATGAACATTTCTCACC................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................CAATGGAATTGCCCTGCCA........................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................TGTAGTAATAACTGACCATTA....................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
................................................GGGTATTGAAGATGAAGATGAG......................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................TAATACAGCGCAGAGGAAG.............................. 19 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................TTGATGTTGATGACTGCGTAGGC................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................................GCGCAGAGGAAGCGTCAGCGGT.................... 22 0 1 1.00 1 1 0 0 0 0 0
.........................................................AGATGAAGATGAGGATGAGGA................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
........................................................AAGATGAAGATGAGGATGAG................................................................................................................................................................................................................................... 20 0 2 0.50 1 0 1 0 0 0 0
..................................................................TGAGAATGAGAATAATAATGAGGA..................................................................................................................................................................................................................... 24 3 5 0.40 2 2 0 0 0 0 0
.....................................................................................GAGGATGAGGATAATGATG....................................................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0
......................................................................GATGAGGATAATGATGAGGATAATG................................................................................................................................................................................................................ 25 2 3 0.33 1 0 1 0 0 0 0
...................................................................GAGGATGAGGATAATGATG......................................................................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0
....................................................................ATGATGAGGATAATGATGAGGATA................................................................................................................................................................................................................... 24 2 6 0.17 1 0 1 0 0 0 0
..................................................................................................................................................TGCCAGTTGATCCCGATGAC......................................................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0
..................................................................TGAGAATGAGAATAATAATGAGG...................................................................................................................................................................................................................... 23 3 8 0.13 1 1 0 0 0 0 0
............................................................CGAAGATGAGGATGAGGAT................................................................................................................................................................................................................................ 19 1 17 0.12 2 2 0 0 0 0 0
...................................................................AATGATGAGGATAATGATGAGGATA................................................................................................................................................................................................................... 25 3 11 0.09 1 0 1 0 0 0 0
..........................................................................................................................................................................................................................................TCAAACATCCACTCTTCATA................................................. 20 3 11 0.09 1 0 0 0 0 0 1
.....................................................TTGAAGATGAAGAAGAGG........................................................................................................................................................................................................................................ 18 1 14 0.07 1 1 0 0 0 0 0
.........................................................................GAGGATAATGCAGAGGAT.................................................................................................................................................................................................................... 18 2 17 0.06 1 1 0 0 0 0 0
.........................................................................................TTGAGGATAATGGTGATG.................................................................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0
.................................................................................CGATGAGGACGAGGATAATG.......................................................................................................................................................................................................... 20 2 20 0.05 1 1 0 0 0 0 0
...............................................................CGATGAGGACGAGGATAATG............................................................................................................................................................................................................................ 20 2 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

ACGCGGGCTTCACTAACGAGGAGTGTTACTGTTGCGCACCCAGCTACACCCATAACTTCTACTTCTACTCCTACTCCTATTACTACTCCTACTCCTATTACTACTACGACTACAACTTTAACTACAGCTCTAGTTACCTTAACGGGACGGTCAACTACAACTACTGACGCATCCGTTAAACATCATTATTGACTGGTAATTAATTACTTGTAAAGAGTGGTTTGTTTTTGTTTTAGTTTGTAGTGGAGAAGTCTATTATGTCGCGTCTCCTTCGCAGTCGCCATGTCGCTTCCGTCGTCGTTG
***********************************************************************************.((((((((((((.((((((((.((....))))))).))))))))))..((((....)))).))))).....................************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M062
head
..................................................................ACTCTTACTCTTATTATTACTCCT..................................................................................................................................................................................................................... 24 3 5 0.40 2 2 0
.......................................................................................................................................................................................................................................................................CGTCTCCTTCGCAGTCGTG..................... 19 2 7 0.14 1 0 1
................................................................................................................................................................................................................................TATTGGTTTTAGTTTGTAG............................................................ 19 2 10 0.10 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:11775967-11776269 + dps_3158 TGCGCCCGAAGTGAT---TGCTCCT----------------CACAATGACAACGCGTGGGTCGATGTGGGTATTGAAGATGA--------------------------AGATGAGGATGAGGATAATG---------------ATGAGGATGAGGATAATGATGATGCTGATGTTGAAATTGATGTCGAG---ATC--------------------------------AAT-GGAATTGCCCT--GCCAGTTGATGTTGATGACTGCGTAGGCAATT--T--G-------TAGTA----ATAACTGA---------CCATT-AA-T-----------------------TAA--TGAACA------TTTCT-----------------------------------------------------------------------------CA---CCAAACAAAAACAAAATCAAA----CATCA---CCT-CTTCAGATAATAC---AGCGCAGAGGAAGCGTCAGCGGTACAGCGAAGGCAGCAGCAAC
droPer2 scaffold_20:1697303-1697604 + dpe_1137 TGCGCCCGAAGTGAT---TGCTCCT----------------CACAATGACAACGCGTGGGTCGATGTGGGTATTGAAGATGA--------------------------AGATGAGGATGAGGATAATG---------------ATGAGGATGAGGATAATGATGATGCTGATGTTGAAATTGATGTCGAG---ATC--------------------------------AAT-GGAATTGCCCT---GCAGTTGATGTTGATGACTGCGTAGGCAATT--T--G-------TAGTA----ATAACTGA---------CCATT-AA-T-----------------------TAA--TGAACA------TTTCT-----------------------------------------------------------------------------CA---CCAAACAAAAACAAAATCAAA----CATCA---CCT-CTTCAGATAATAC---AGCGCAGAGGAAGCGTCAGCGGTACAGCGAAGGCAGCAGCAAC
droWil2 scf2_1100000004511:2782892-2783186 + TGTGCCCGAACTAGT---GGCT-------------------CACAATGACAATGCT---GTTGATGTTGATGATATTGTG--GATGT---------------------GGATGTTAATGTGAATGTTG---------------ATATGGAAGATGATGATGATGATGATGATGCAGAAGAAGAAGAAGTTGGTGTTAAAATTGT------------------------GCC-AACATTGTGA-----GAGTTGG---CGGCAATT-TGTGACGAGATTTAGGA-------AAACA----AAAATCAT-TTC-----TATCA-TT-T----CTTAAC---------------------------TTAACTTA--------------------T-------ATCATACA-TAT-ATAT--A-----------------------------------------------------------------A-TAT-ATATAGATAATGC---GGCGATCAATAAACGTCAGCGCTATAGTGAGGGCAAT------
droVir3 scaffold_13049:22821719-22822063 - CGTGCCTCAGGTTTTATCTGCTGCT----------------GGCAATGACAATGAC---AATGACAATGGCAATGGC-----AATGAGAATGGGAATGGTGTTGATGATGTTGAAGATGCAGCAGTTA---------------ATCAGGTTGATGTTAATGATGATGATGATGATGATGAT------------GTA--------------------------------ACTGGGAATTCTACTGCCCCCGTTTA---TGATAATTAAGTTAGCAAAT----------------------GTAATTCG---------CAATT----------CGCAT---------------------------TTAA------------------------------CACTTGCATT-CAT-TTTA--CCAACTATTTAACACACATACACTCTTTCTCT---CTACACACACACAAACACGCTTACA-----CA-CAT-GCACAGATACTGC---TGTGATCAGCAAACGGCAGCGCTATAGCGACAGCAGCGCC---
droMoj3 scaffold_6540:2912553-2912834 - AGTGCCCGATTTAAT---TAATCGAAATATTGATGAGGGCAATGAGCGACTGT-------------TGGGTACTGACGATGA--------------------------TGATGATGGTGGCGATGATGATG------------ACGATACTGATGTTGATGCTGGTGCTGATGCTGATGCTGATGACGAT---GAC--------GATGATGGTGATGACATTGAAGTGGGC-AGAGATGGGGG--CACTATCA------------------------------------------------------------------------------TTATG---CCAGACTTCG-----------------GGTCCAGCAGTGAGAAACATGCAGGAGCCGATAATTGGCAA-AGG-CT---------------------------------------------------------------------------------GGGCACAC---TGGATAAGGCGCGCAGCAAGACTACAAC---------------
droGri2 scaffold_15110:9088329-9088643 - dgr_310 TGTGCCTCAAGTTTT---TGCT-------------------GCTGACAATAATGGC---------------AATGAC-----AATGA---------------------GAATGGGATTAGCAATGGTG---TTGAAGATGATGCAAC------AGTTAATCATGTTGATGATGTTGGTGATGATGTTGATGAAGTT--------------------------------ACAGGGAGTTTGACTGCCCACGTTTA---TCATAATTAAGTTAGCAATT----------------------GTAATTCG---------CATTT-----------ACAT---------------------------TCGTTCAT--------------------C---TCTCATTCAA-C-TCT-TTTA--CA--------------------CTCTCTTTCACGCACACAAACACACAAATACACACATA---CA---TAT-ACACAGATACGGC---TGTGATCAGCAAGAGGCATCGATATAGCGAGGACGGCACCAGC
droAna3 scaffold_13337:19355536-19355796 + TGTGCCCGAGTTGGT---GGCC-------------------TTCAGCGACAATGCT---GTCGATGTTGGTATCGGT-----------------------------------------------------------------------------------GATGACGAT---------GATAGTCCTGTGGGAGTA--------------------------------AAT-GGAATTGCACT--CCCAGTTGA---CGACAACTGCGTAGGCAATT--AATA-------AAATA----GTAAATAG---------TTTTT-TT-CCCCCCTCT--------------A---T---------CATAACCTT--------------------T---TCTAATCGCTTT-TCT-------------------------------------GT---CCCCCCTCCATCACGAT-------------CCA-C-CATTTAGATAATGC---GGCGTTGACGAAGCGACAGCGATACAGCGACGGAAGCCCCAG-
droBip1 scf7180000396360:550367-550617 + TGTGCCCGAGTTGGT---GGCC-------------------TTCAGCGACAATGCT---GTCGATGTTGGTATCGGT-----------------------------------------------------------------------------------GATGATGAT---------GATAGTCCCGTGGGAGTA--------------------------------AAT-GGAATTGCACT--CCCAGTTGA---CGACAACTGCGTAGGCAATT--AATA-------AAATA----GTAAATTCTCTCCCCCACC------------CTCC--------------A---T---------CATTACTTT--------------------T---TCTAATCCTACA-TAC-C---------------------------------------------------TATCATCCAC----CACCA---TGC-ATCTAGATAATGC---GGCGTTGACCAAGCGACAGCGATACAGTGACGGAAGCC-----
droKik1 scf7180000302686:347747-348011 - TGTGCCCGAAGTGGT---GGCC-------------------CACAGCGATAATGCT---GTTGATGTTGGTGTTGATGATGA--------------------------ACGTTATGGT------------------------------------------G---------GTGATGTCGTTAGTCCCCTGGGCATT--------------------------------AGT-GGCCTTGCAAT--CCCAGTTGA---CGACAATTGTGTGGGCAGTTTAAATTGAAAGAAGAATA----GTAACTTG---------AAACTGGAAT----AC-----------------CT---------CCTTCGACCCC--------------------A---AATAATCGAATC-TCT-TTTG--AAA--------------------------------------------------------------ACT-T-TGGACAGATAACACAGCAGCGATTACCAAGCGGCAGCGTTACAGCGAGGG----------
droFic1 scf7180000454113:2406428-2406680 + ATTGCCGGAAGTGTT---GGCC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATTGAT--------------------------------------------------------------------------------GATGATGAATGTAGTGAATTTAGAGCCGTGACTGTT--------------------------------AAT-GGCATTGCGAA--CCCAGTTGA---CGACAACTGTGTGGGCAATT--AATT-------AAATA----GTAACTTG---------AATTG-CAAC----AC-----------------TA---------TTTTCGATCCA--------------------A---GCTAATTGCATT-TGT-TTTG--AA---------------------------------------------------------------ACC-C-CGTACAGATAATGC---AGCGCTGAACAAGCGACAGCGCTACAGCGACGGAAGTG-----
droEle1 scf7180000491193:4184128-4184375 - TGTGCCAGAAGTGGT---GGAC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GAGGATGAATGTGATGAAGTTAGACCCATGGGAATT--------------------------------AAT-GGCATTGCAAA--CCCAGTTGA---CGACAACTGTGTGGGCAATT--AATT-------AAGTA-------CATTGTTTACTGG-AGCTA-CA-A----AC----AT-----------T------------ATTTACTTT--------------------A---GTTAATTGTGTTTCGTTTTTG--GG---------------------------------------------------------------CCC-T-TGTACAGATAATAT---AGCGCCAGGCAAGCGGCAGCGCTACAGCGAC------------
droRho1 scf7180000773422:22766-23018 + TGTGCCAGAAGTGGT---GGAC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GAGGATGAATGTGGTGAAGTTAGAAGCGTGGGAATT--------------------------------AAT-GGCATTGCGAA--CCCAGTTGA---TGACAACTGTGTGGGCAATT--AATT-------AAGTACATTGTGGCTTG---------AGTTT----------CGAATTT-----------T------------ACTGACCCT--------------------C---TTTAATCGCATA-TGT-TTTG--GG---------------------------------------------------------------TC--CC-GCACAGATAACAC---AGCGCTAACCAAGCGGCAGCGCTACAGCGACGGAAGTGCC---
droBia1 scf7180000302428:1396662-1396933 + CGGGCCGGAAGTGGT---GGCC-------------------CACAGCGACAACGCT---GTCGATGTTGGTATTATTGATGA--------------------------AGATGGTGAT------------------------------------------GATGATGATGGTGGCCACGTTAGAGCCGTGGGCGCG--------------------------------AAT-GGCATTGCGAA--CCCAGTTGG---CGACAACTGTGTGGGCAATT--AATT-------AAGTA----GTAACTTG---------AATTG-AATCGACCGC-----------------TTGT---------CTAGATCCT--------------------C---GTTAATTGTTTG-TGTGTTTG--GC---------------------------------------------------------------CCA-T-TGTACAGATAACAT---AGTGCTGAGCAAGCGTCAGCGCTACAGCGACGGAAGTGCC---
droTak1 scf7180000415420:193928-194163 + TGTGCCAGAAGTGGT---GGCC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GAAGATGGTGAAGATGAAGTTAGAAACGTGGCCGTT--------------------------------AAT-GGCATTGCGAA--CCCAGTTGA---CGACAATTGTGTGGGCAATT--AATT-------AAGTA----GTAACTTG---------AATTT-AAGC----ACCTAT---------------------------TTGATTCT--------------------C---GTTAATTATATA-TAT-TCTG--GA---------------------------------------------------------------TCC-T-TGTATAGATAATGT---AGTGCTAACCAAGCGGCAGCGCAAC------------------
droEug1 scf7180000409466:5035983-5036210 + TGTGCCAGAAGTGGT---GACC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTAAT-----------------------------------------------------------------------------------GATGATGATTGTGGCGAAGTTAGAG--------------------------------------------------------------CAGTTGA---CGACAACTGTGTGGGCAATT--AATT-------AAGTA----GTAACTTC-TTA-----TATTA-AT-C----ATTTAT---------------------------TTGATCTT--------------------CGTCGTTAACTGTTAA-TGT-TTTGTCGA---------------------------------------------------------------TCA-T-TGTATAGATAACAC---AGTGCTAACCAAGCGGCAGCGCTACAGCGACGGAAGT------
dm3 chr3L:19912341-19912601 - TGCGCCAGAAGTGCT---GACC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGATTTGGTGCCGTGGGAGTTATG-----------------------------AAT-GGAGTTGCGAG--CCCAGTTGC---CAACAACTGTGTGGGCAACT--AAAT-------CAGTA----GTAACTTG---------GATTC-AA-C----TTGCATTTGACCCGCTCTA-----------------A------------------------T---TCTAATGGTATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CTAGATAATAC---AGTGCTTAACAAGCGGCAGCGTTACAGCGACGGAAGTCCCGGG
droSim2 3l:19505717-19505963 - dsi_14995 TGCGCCAGAGGTGCT---GGCC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGATTTGGTGCCGTGGGAGTT--------------------------------AAT-GGAGTTGCGAG--CCCGGTTGC---CCACAACTGTGTGGGCAACT--AACT-------CAGTA----GTAACTTG---------AATTC-AA-C----TTGCAT---------------------------TTGACCCG--------------------C---TCTAATGGTATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CTAGATAATAC---AGTGCTTACCAAGCGGCAGCGCTACAGCGACGGAAGTC-----
droSec2 scaffold_29:556968-557216 - TGCGCCAGAGGTGCT---GGCC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGATTTGGTGCCGTGGGAGTT--------------------------------AAT-GGAGTTGCGAG--CCCGGTTGC---CAACCACTGTGTGGGCAACT--AACT-------CAGTA----GTAACTTG---------AATTC-AA-G----TTGCAT---------------------------TTGACCCG--------------------C---TCTAATGGTATA-TGT-TTTG--GA---------------------------------------------------------------AC--TTTG-CTAGATAATAC---AGTGCTTACCAAGCGGCAGCGCTACAGCGACGGAAGTCCC---
droYak3 3L:20664996-20665251 + TGTGTCAGAGGTGCT---GGCC-------------------CACAGCGATAATGCT---GTCGATGCTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGACTTAGTGCCGTGGGAGTT--------------------------------AAT-GGAATTGCGAG--CCCAGTTGC---CAACAACTGTGTGGGCAATT--AATT-------AAGTA----GTAACTTC---------GTTTT-AG-C-----------------------TTCTCTAAACCTCTTCGACCCA--------------------C---TCTAATGGTACA-TGT-TTTG--A----------------------------------------------------------------CA--TT-CGGTAGATAATAC---AGCGCTTACCAAGCGGCAGCGCTACAGCGACGGAATTGCC---
droEre2 scaffold_4784:19650038-19650282 - TGTGCCAGAGGTGCT---GGCC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGATTTAGTGCCGTGGGAGTT--------------------------------AAT-GGAATTGCGAG--CCCAGTTGC---CAACAACTGTGTGGGCAATT--AATA-------AAGTA----GTAACTTC---------GATTC-AGCC----TCTGAT---------------------------TCGACACA--------------------C---TCTAATGGTATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-GTAGATAATAC---AGTGCTAACCAAGCGGCACCGCTACAGCGATGGAA--------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGCGCCCGAAGTGAT---TGCTCCT----------------CACAATGACAACGCGTGGGTCGATGTGGGTATTGAAGATGA--------------------------AGATGAGGATGAGGATAATG---------------ATGAGGATGAGGATAATGATGATGCTGATGTTGAAATTGATGTCGAG---ATC--------------------------------AAT-GGAATTGCCCT--GCCAGTTGATGTTGATGACTGCGTAGGCAATT--T--G-------TAGTA----ATAACTGA---------CCATT-AA-T-----------------------TAA--TGAACA------TTTCT-----------------------------------------------------------------------------CA---CCAAACAAAAACAAAATCAAA----CATCA---CCT-CTTCAGATAATAC---AGCGCAGAGGAAGCGTCAGCGGTACAGCGAAGGCAGCAGCAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCAGCGGTACAGCGAAGGC.........2312.0020100001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGTACAGCGAAGGCAGC......2311.0010000100000
..................................................................................................................................................................................................................................................................................................................................AA-T-----------------------TAA--TGAACA------TTTCT-----------------------------------------------------------------------------CA---CC..............................................................................................2111.0010010000000
...................................................................................................................................................................................................C--------------------------------AAT-GGAATTGCCCT--GCCA............................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................T--G-------TAGTA----ATAACTGA---------CCATT-A..................................................................................................................................................................................................................................2111.0010100000000
...................................................................GGGTATTGAAGATGA--------------------------AGATGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAC---AGCGCAGAGGAAG..............................1911.0010000001000
..........................................................................................................................................................................................................................................................TTGATGTTGATGACTGCGTAGGC....................................................................................................................................................................................................................................................................................2311.0010000000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAGAGGAAGCGTCAGCGGT....................2211.0010100000000
............................................................................AGATGA--------------------------AGATGAGGATGAGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................AAGATGA--------------------------AGATGAGGATGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000001000
.................................................................................................................................................GAGGATGAGGATAATGATG.................................................................................................................................................................................................................................................................................................................................................................................................1930.3310100000000
................................................................................................................GAGGATGAGGATAATG---------------ATG...................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310100000000
droPer2
TGCGCCCGAAGTGAT---TGCTCCT----------------CACAATGACAACGCGTGGGTCGATGTGGGTATTGAAGATGA--------------------------AGATGAGGATGAGGATAATG---------------ATGAGGATGAGGATAATGATGATGCTGATGTTGAAATTGATGTCGAG---ATC--------------------------------AAT-GGAATTGCCCT---GCAGTTGATGTTGATGACTGCGTAGGCAATT--T--G-------TAGTA----ATAACTGA---------CCATT-AA-T-----------------------TAA--TGAACA------TTTCT-----------------------------------------------------------------------------CA---CCAAACAAAAACAAAATCAAA----CATCA---CCT-CTTCAGATAATAC---AGCGCAGAGGAAGCGTCAGCGGTACAGCGAAGGCAGCAGCAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................TTGATGTTGATGACTGCGTAGGC....................................................................................................................................................................................................................................................................................2316.006300003
..........................................................................................................................................................GATAATGATGATGCTGATGTTG.....................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
..................................................................................................................................................................................................................................................................GATGACTGCGTAGGCAAT.................................................................................................................................................................................................................................................................................1811.001100000
..................................................................................................................................................................................................................................................................GATGACTGCGTAGGCAATT--..............................................................................................................................................................................................................................................................................1911.001000001
.................................................................................................................................................GAGGATGAGGATAATGATGATG..............................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...........................................................................................................................................................................................................................................................TGATGTTGATGACTGCGTAGGC....................................................................................................................................................................................................................................................................................2211.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---CCAAACAAAAACAAAATCAAA----C......................................................................2411.001010000
............................................................................................................................................................................GTTGAAATTGATGTCGAG---....................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................GTATTGAAGATGA--------------------------AGATGAGGATGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
................................................................................GA--------------------------AGATGAGGATGAGGAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1850.201010000
droWil2
TGTGCCCGAACTAGT---GGCT-------------------CACAATGACAATGCT---GTTGATGTTGATGATATTGTG--GATGT---------------------GGATGTTAATGTGAATGTTG---------------ATATGGAAGATGATGATGATGATGATGATGCAGAAGAAGAAGAAGTTGGTGTTAAAATTGT------------------------GCC-AACATTGTGA-----GAGTTGG---CGGCAATT-TGTGACGAGATTTAGGA-------AAACA----AAAATCAT-TTC-----TATCA-TT-T----CTTAAC---------------------------TTAACTTA--------------------T-------ATCATACA-TAT-ATAT--A-----------------------------------------------------------------A-TAT-ATATAGATAATGC---GGCGATCAATAAACGTCAGCGCTATAGTGAGGGCAAT------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTCAGCGCTATAGTGAGG...........2211.00100010
.........................................................................................................................................................................GATGCAGAAGAAGAAGAAGTTGGT....................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.............................................................TGATGTTGATGATATTGTG--GATGT---------------------GG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..............................................................................................................................TG---------------ATATGGAAGATGATGATG....................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
........................................................................................................................GAATGTTG---------------ATATGGAAGATGATGAT.....................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGC---GGCGATCAATAAACG............................2111.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGC---GGCGATCAATAAA..............................1811.00100010
...................................................................TGATGATATTGTG--GATGT---------------------GGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
........................................................................................................................................................................TGATGCAGAAGAAGAAGAA..........................................................................................................................................................................................................................................................................................................................................................................1920.50100100
....................................................................................................................................................GAAGATGATGATGATGATGAT............................................................................................................................................................................................................................................................................................................................................................................................21200.15320100
....................................................................................................................................................GAAGATGATGATGATGATGATGATG........................................................................................................................................................................................................................................................................................................................................................................................25200.05100100
droVir3
CGTGCCTCAGGTTTTATCTGCTGCT----------------GGCAATGACAATGAC---AATGACAATGGCAATGGC-----AATGAGAATGGGAATGGTGTTGATGATGTTGAAGATGCAGCAGTTA---------------ATCAGGTTGATGTTAATGATGATGATGATGATGATGAT------------GTA--------------------------------ACTGGGAATTCTACTGCCCCCGTTTA---TGATAATTAAGTTAGCAAAT----------------------GTAATTCG---------CAATT----------CGCAT---------------------------TTAA------------------------------CACTTGCATT-CAT-TTTA--CCAACTATTTAACACACATACACTCTTTCTCT---CTACACACACACAAACACGCTTACA-----CA-CAT-GCACAGATACTGC---TGTGATCAGCAAACGGCAGCGCTATAGCGACAGCAGCGCC---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................GAT------------GTA--------------------------------ACTGGGAATTCTACT..................................................................................................................................................................................................................................................................................................................2112.002200000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................GATGATGAT------------GTA--------------------------------ACTGGGA..........................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
..................................................................................AATGAGAATGGGAATGGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
...................................................................TGGCAATGGC-----AATGAGAATGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000100000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACTGC---TGTGATCAGCAAACGGC..........................2511.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAACGGCAGCGCTATAGCGAC............2511.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................TGATGATGTTGAAGATGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
....................................................................................TGAGAATGGGAATGGTGTTGATGATGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCAGCGCTATAGCGACAGC.........2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................GATGATGATGATGAT------------GTA--------------------------------ACT..............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................TGATGATGATGATGATGAT------------GTA--------------------------------.................................................................................................................................................................................................................................................................................................................................2270.866000010000000000000000000000001020000100100000000000000000000000
...............................................................................................................................................................TGATGATGATGATGATGATGAT------------GTA--------------------------------.................................................................................................................................................................................................................................................................................................................................2530.672000000001000000000000000000000000000001000000000000000000000000
...................................................ATGAC---AATGACAATGGCAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................TGATGATGATGATGATGAT------------GT..................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000002000000000000000000000000000000000
...............................................................................................................................................................TGATGATGATGATGATGATG..................................................................................................................................................................................................................................................................................................................................................................................20200.102000000200000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GATGATGATGATGATGATGA.................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................TGATGATGATGATGATGATGAT------------GT..................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
droMoj3
AGTGCCCGATTTAAT---TAATCGAAATATTGATGAGGGCAATGAGCGACTGT-------------TGGGTACTGACGATGA--------------------------TGATGATGGTGGCGATGATGATG------------ACGATACTGATGTTGATGCTGGTGCTGATGCTGATGCTGATGACGAT---GAC--------GATGATGGTGATGACATTGAAGTGGGC-AGAGATGGGGG--CACTATCA------------------------------------------------------------------------------TTATG---CCAGACTTCG-----------------GGTCCAGCAGTGAGAAACATGCAGGAGCCGATAATTGGCAA-AGG-CT---------------------------------------------------------------------------------GGGCACAC---TGGATAAGGCGCGCAGCAAGACTACAAC---------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................GATGCTGATGACGAT---GAC--------G........................................................................................................................................................................................................................................................................................................................................................1930.331100000
droGri2
TGTGCCTCAAGTTTT---TGCT-------------------GCTGACAATAATGGC---------------AATGAC-----AATGA---------------------GAATGGGATTAGCAATGGTG---TTGAAGATGATGCAAC------AGTTAATCATGTTGATGATGTTGGTGATGATGTTGATGAAGTT--------------------------------ACAGGGAGTTTGACTGCCCACGTTTA---TCATAATTAAGTTAGCAATT----------------------GTAATTCG---------CATTT-----------ACAT---------------------------TCGTTCAT--------------------C---TCTCATTCAA-C-TCT-TTTA--CA--------------------CTCTCTTTCACGCACACAAACACACAAATACACACATA---CA---TAT-ACACAGATACGGC---TGTGATCAGCAAGAGGCATCGATATAGCGAGGACGGCACCAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................ATGATGTTGGTGATGATGTT..........................................................................................................................................................................................................................................................................................................................................................................2011.00101
droAna3
TGTGCCCGAGTTGGT---GGCC-------------------TTCAGCGACAATGCT---GTCGATGTTGGTATCGGT-----------------------------------------------------------------------------------GATGACGAT---------GATAGTCCTGTGGGAGTA--------------------------------AAT-GGAATTGCACT--CCCAGTTGA---CGACAACTGCGTAGGCAATT--AATA-------AAATA----GTAAATAG---------TTTTT-TT-CCCCCCTCT--------------A---T---------CATAACCTT--------------------T---TCTAATCGCTTT-TCT-------------------------------------GT---CCCCCCTCCATCACGAT-------------CCA-C-CATTTAGATAATGC---GGCGTTGACGAAGCGACAGCGATACAGCGACGGAAGCCCCAG-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC---GGCGTTGACGAAGC.............................1813.003000003
.................................................................................................................................................................................................GTA--------------------------------AAT-GGAATTGCACT--CCCAGT..........................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
TGTGCCCGAGTTGGT---GGCC-------------------TTCAGCGACAATGCT---GTCGATGTTGGTATCGGT-----------------------------------------------------------------------------------GATGATGAT---------GATAGTCCCGTGGGAGTA--------------------------------AAT-GGAATTGCACT--CCCAGTTGA---CGACAACTGCGTAGGCAATT--AATA-------AAATA----GTAAATTCTCTCCCCCACC------------CTCC--------------A---T---------CATTACTTT--------------------T---TCTAATCCTACA-TAC-C---------------------------------------------------TATCATCCAC----CACCA---TGC-ATCTAGATAATGC---GGCGTTGACCAAGCGACAGCGATACAGTGACGGAAGCC-----SizeHit CountTotal NormTotal
No Reads
droKik1
TGTGCCCGAAGTGGT---GGCC-------------------CACAGCGATAATGCT---GTTGATGTTGGTGTTGATGATGA--------------------------ACGTTATGGT------------------------------------------G---------GTGATGTCGTTAGTCCCCTGGGCATT--------------------------------AGT-GGCCTTGCAAT--CCCAGTTGA---CGACAATTGTGTGGGCAGTTTAAATTGAAAGAAGAATA----GTAACTTG---------AAACTGGAAT----AC-----------------CT---------CCTTCGACCCC--------------------A---AATAATCGAATC-TCT-TTTG--AAA--------------------------------------------------------------ACT-T-TGGACAGATAACACAGCAGCGATTACCAAGCGGCAGCGTTACAGCGAGGG----------SizeHit CountTotal NormTotal
No Reads
droFic1
ATTGCCGGAAGTGTT---GGCC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATTGAT--------------------------------------------------------------------------------GATGATGAATGTAGTGAATTTAGAGCCGTGACTGTT--------------------------------AAT-GGCATTGCGAA--CCCAGTTGA---CGACAACTGTGTGGGCAATT--AATT-------AAATA----GTAACTTG---------AATTG-CAAC----AC-----------------TA---------TTTTCGATCCA--------------------A---GCTAATTGCATT-TGT-TTTG--AA---------------------------------------------------------------ACC-C-CGTACAGATAATGC---AGCGCTGAACAAGCGACAGCGCTACAGCGACGGAAGTG-----SizeHit CountTotal NormTotal
No Reads
droEle1
TGTGCCAGAAGTGGT---GGAC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GAGGATGAATGTGATGAAGTTAGACCCATGGGAATT--------------------------------AAT-GGCATTGCAAA--CCCAGTTGA---CGACAACTGTGTGGGCAATT--AATT-------AAGTA-------CATTGTTTACTGG-AGCTA-CA-A----AC----AT-----------T------------ATTTACTTT--------------------A---GTTAATTGTGTTTCGTTTTTG--GG---------------------------------------------------------------CCC-T-TGTACAGATAATAT---AGCGCCAGGCAAGCGGCAGCGCTACAGCGAC------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGTGCCAGAAGTGGT---GGAC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GAGGATGAATGTGGTGAAGTTAGAAGCGTGGGAATT--------------------------------AAT-GGCATTGCGAA--CCCAGTTGA---TGACAACTGTGTGGGCAATT--AATT-------AAGTACATTGTGGCTTG---------AGTTT----------CGAATTT-----------T------------ACTGACCCT--------------------C---TTTAATCGCATA-TGT-TTTG--GG---------------------------------------------------------------TC--CC-GCACAGATAACAC---AGCGCTAACCAAGCGGCAGCGCTACAGCGACGGAAGTGCC---SizeHit CountTotal NormTotal
No Reads
droBia1
CGGGCCGGAAGTGGT---GGCC-------------------CACAGCGACAACGCT---GTCGATGTTGGTATTATTGATGA--------------------------AGATGGTGAT------------------------------------------GATGATGATGGTGGCCACGTTAGAGCCGTGGGCGCG--------------------------------AAT-GGCATTGCGAA--CCCAGTTGG---CGACAACTGTGTGGGCAATT--AATT-------AAGTA----GTAACTTG---------AATTG-AATCGACCGC-----------------TTGT---------CTAGATCCT--------------------C---GTTAATTGTTTG-TGTGTTTG--GC---------------------------------------------------------------CCA-T-TGTACAGATAACAT---AGTGCTGAGCAAGCGTCAGCGCTACAGCGACGGAAGTGCC---SizeHit CountTotal NormTotal
No Reads
droTak1
TGTGCCAGAAGTGGT---GGCC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GAAGATGGTGAAGATGAAGTTAGAAACGTGGCCGTT--------------------------------AAT-GGCATTGCGAA--CCCAGTTGA---CGACAATTGTGTGGGCAATT--AATT-------AAGTA----GTAACTTG---------AATTT-AAGC----ACCTAT---------------------------TTGATTCT--------------------C---GTTAATTATATA-TAT-TCTG--GA---------------------------------------------------------------TCC-T-TGTATAGATAATGT---AGTGCTAACCAAGCGGCAGCGCAAC------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGTGCCAGAAGTGGT---GACC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTAAT-----------------------------------------------------------------------------------GATGATGATTGTGGCGAAGTTAGAG--------------------------------------------------------------CAGTTGA---CGACAACTGTGTGGGCAATT--AATT-------AAGTA----GTAACTTC-TTA-----TATTA-AT-C----ATTTAT---------------------------TTGATCTT--------------------CGTCGTTAACTGTTAA-TGT-TTTGTCGA---------------------------------------------------------------TCA-T-TGTATAGATAACAC---AGTGCTAACCAAGCGGCAGCGCTACAGCGACGGAAGT------SizeHit CountTotal NormTotal
No Reads
dm3
TGCGCCAGAAGTGCT---GACC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGATTTGGTGCCGTGGGAGTTATG-----------------------------AAT-GGAGTTGCGAG--CCCAGTTGC---CAACAACTGTGTGGGCAACT--AAAT-------CAGTA----GTAACTTG---------GATTC-AA-C----TTGCATTTGACCCGCTCTA-----------------A------------------------T---TCTAATGGTATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CTAGATAATAC---AGTGCTTAACAAGCGGCAGCGTTACAGCGACGGAAGTCCCGGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCTTAACAAGCGGCAGCGTT....................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTG........................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000021000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CTAG.....................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................ATGAGTGTGGCGGATTTGGTG............................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................GTTATG-----------------------------AAT-GGAGTTGCGAG--................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CTAG.....................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTACAGCGACGGAAGTCCCGGG2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGG.......................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATAC---AGTGCTTAACAAGCGGCAG........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAC---AGTGCTTAACAAGCGGCAGCGTT....................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................GCCGTGGGAGTTATG-----------------------------AAT-GGAG.........................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAATAC---AGTGCTTAACAAGCGGC..........................2512.0020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTACAGCGACGGAAGTCC....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGC......................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000
...........................................................................TT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGATTTGGT.............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ATTC-AA-C----TTGCATTTGACCCG.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GCATTTGACCCGCTCTA-----------------A------------------------T---T.........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAC---AGTGCTTAACAAGCG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GA...................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GGTATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CTAG.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................AATGCT---GTCGATGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................GTGTGGCGGATTTGGTGCCGT........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................ACTTG---------GATTC-AA-C----TTGCATTTGACC...............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GATGTTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGT.........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................TAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................ATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGG....................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTACAGCGACGGAAGTCC....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................TG-----------------------------AAT-GGAGTTGCGAG--CCCAGTT.........................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTG--GA---------------------------------------------------------------CC--TTTG-CTAGATAAT................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................ATGATGAGTGTGGCGGATTTG...............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGC......................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................ACAACTGTGTGGGCAACT--AAA...........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GGCAACT--AAAT-------CAGTA----GT........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CT.......................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCTTAACAAGCGGCAGCGTTAC..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGCAGCGTTACAGCGACG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................TTATT-----------------------------------------------------------------------------------GATGATGAGTGTGG.......................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAC---AGTGCTTAACAAGCGGC..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGTTACAGCGACGGA.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CTAG.....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGCGGCAGCGTTACAGC...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TAATGCT---GTCGATGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................A-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CT.......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACAGCGACGGAAGTCCCGG.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................................................................................................................................................................................................................................................................AACAACTGTGTGGGCAACT--AAAT-------CAG................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAC---AGTGCTTAACAAGC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GTATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-C........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............GCT---GACC-------------------CACAGCGATAATGCT---GT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGCGACGGAAGTCCCGG.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................ATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-C........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GAG--CCCAGTTGC---CAACAACTGT..........................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAAGCGGCAGCGTTACAG................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AGTGCTTAACAAGCGGCAGCGTT....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GAG--CCCAGTTGC---CAACAACT............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTGGTATTATT-----------------------------------------------------------------------------------GATGATGAG............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTACAGCGACGGAAGTCCCGTC2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AGTGTGGCGGATTTGGTGCCG.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GTGGGCAACT--AAAT-------CAGTA----GT........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AT-GGAGTTGCGAG--CCCAGTTGC---CAA.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................GATAATGCT---GTCGATGTTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................GTTGC---CAACAACTGTGTGGGC....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................TTTGGTGCCGTGGGAGTTATG-----------------------------AAT-G............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTACAGCGACGGAAGTCCC...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAC---AGTGCTTAACAAGCGGCAGCGT.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................A-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CTAGATAAT................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................GCGAG--CCCAGTTGC---CAACA...............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................CAACAACTGTGTGGGCAAC.................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AACTGTGTGGGCAACT--AAAT-------CAG................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCAGCGTTACAGCGACGGAAGT......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................T---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GAT..................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................GATAATGCT---GTCGATGTTGGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................................................................................................................................................................................................AGTTGCGAG--CCCAGTTGC---C...................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGCGCCAGAGGTGCT---GGCC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGATTTGGTGCCGTGGGAGTT--------------------------------AAT-GGAGTTGCGAG--CCCGGTTGC---CCACAACTGTGTGGGCAACT--AACT-------CAGTA----GTAACTTG---------AATTC-AA-C----TTGCAT---------------------------TTGACCCG--------------------C---TCTAATGGTATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-CTAGATAATAC---AGTGCTTACCAAGCGGCAGCGCTACAGCGACGGAAGTC-----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................CTAATGGTATA-TGT-TTTG--GA---------------------------------------------------------------C.................................................................2112.00220000000000000000
.......................................................................................................................................................................................................................................................CGGTTGC---CCACAACTGTGTGG......................................................................................................................................................................................................................................................................................2111.00100010000000000000
...........................................................GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GATGATGA.............................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
droSec2
TGCGCCAGAGGTGCT---GGCC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGATTTGGTGCCGTGGGAGTT--------------------------------AAT-GGAGTTGCGAG--CCCGGTTGC---CAACCACTGTGTGGGCAACT--AACT-------CAGTA----GTAACTTG---------AATTC-AA-G----TTGCAT---------------------------TTGACCCG--------------------C---TCTAATGGTATA-TGT-TTTG--GA---------------------------------------------------------------AC--TTTG-CTAGATAATAC---AGTGCTTACCAAGCGGCAGCGCTACAGCGACGGAAGTCCC---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................ATTATT-----------------------------------------------------------------------------------GATGATGAGTGT.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.....................................................................GTATTATT-----------------------------------------------------------------------------------GATGATGAGTGT.........................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...............................................GATAATGCT---GTCGATGTTGGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
droYak3
TGTGTCAGAGGTGCT---GGCC-------------------CACAGCGATAATGCT---GTCGATGCTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGACTTAGTGCCGTGGGAGTT--------------------------------AAT-GGAATTGCGAG--CCCAGTTGC---CAACAACTGTGTGGGCAATT--AATT-------AAGTA----GTAACTTC---------GTTTT-AG-C-----------------------TTCTCTAAACCTCTTCGACCCA--------------------C---TCTAATGGTACA-TGT-TTTG--A----------------------------------------------------------------CA--TT-CGGTAGATAATAC---AGCGCTTACCAAGCGGCAGCGCTACAGCGACGGAATTGCC---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................CAACAACTGTGTGGGCAATT--AATT-------AAGTA----..........................................................................................................................................................................................................................................................2911.00100000010000
...............................................GATAATGCT---GTCGATGCTGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
..........................................................................................................................................................................GTGGCGGACTTAGTGCCGTGGGAGTT--------------------------------AAT-.............................................................................................................................................................................................................................................................................................................................2911.00100000010000
droEre2
TGTGCCAGAGGTGCT---GGCC-------------------CACAGCGATAATGCT---GTCGATGTTGGTATTATT-----------------------------------------------------------------------------------GATGATGAGTGTGGCGGATTTAGTGCCGTGGGAGTT--------------------------------AAT-GGAATTGCGAG--CCCAGTTGC---CAACAACTGTGTGGGCAATT--AATA-------AAGTA----GTAACTTC---------GATTC-AGCC----TCTGAT---------------------------TCGACACA--------------------C---TCTAATGGTATA-TGT-TTTG--GA---------------------------------------------------------------CC--TTTG-GTAGATAATAC---AGTGCTAACCAAGCGGCACCGCTACAGCGATGGAA--------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................TTTAGTGCCGTGGGAGTT--------------------------------AAT-.............................................................................................................................................................................................................................................................................................................................2111.0010000100
............................................................................................................................................................................................................................................................................................................TAACTTC---------GATTC-AGCC----TCTGA......................................................................................................................................................................................................................2111.0011000000
...........................................................................................................................................................................................................................................................TGC---CAACAACTGTGTGGGC....................................................................................................................................................................................................................................................................................1911.0010000010

Generated: 05/18/2015 at 06:13 AM