ID:

dps_3129

 Coordinate:

XR_group6:9838464-9838687 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dpse\GA23436-cds]; exon [dpse_GLEANR_12222:3]; CDS [Dpse\GA23436-cds]; exon [dpse_GLEANR_12222:2]; intron [Dpse\GA23436-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATCCCCAGCCAACGGCAGCTGCTCCACAGCCAAGTGCTGTTCCAGCTCAGGTAATTTGCGATATCCGTAGGTGTTTAATTCCTGGATTGTATATAGTAGTAAAGACTTGTGTAAATATAATTGTATCTGCAACTGTCACAACTAGTGTCTCCGTCTCCAAATCCGTCTCCGTCTCCACTGATGTACATAGCCATACTCCTACACAGAGACACACACACACACACACTTATACACTCCTAGCACATACCTAACTACGCACTGACCTAACTTTCAGGGTCCCATTTATAACAACGTCCAGCCACGATCCACTCCAACACCTCAGCC
**************************************************......((((.((....(((((((.........(((.((((((.((((((...(((...((((.((((....)))).))))...)))...))))(((((((.((...............((((......))))....(((........))).)).))))))).............)))))))).)))......)))))))..))))))((((........))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM444067
head
 V112
male body
.......................................................................................................................................................................................................................................................................CTAGCATTCAAGGTCCCATT......................................... 20 3 2 4.50 9 9 0 0
.TCCCCAGCCAACGGCAGCTGCT............................................................................................................................................................................................................................................................................................................. 22 0 1 1.00 1 0 1 0
....CCAGCCAACGGCAGCTGCTCC........................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1
.....CAGCCAACGGCAGCTGCTCCACA........................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0
..................CTGCTCCACAGCCAAGTGCTGTT........................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0
.....CAGCCAACGGCAGCTGCTCCA.......................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1
....................................................................AGGTGCTGAATTCCTCGATT............................................................................................................................................................................................................................................ 20 3 13 0.08 1 1 0 0
.......................................................................................................................................................................................................................................................................CTAGCATTCAAGGTCCCAT.......................................... 19 3 19 0.05 1 1 0 0

Anti-sense strand reads

TAGGGGTCGGTTGCCGTCGACGAGGTGTCGGTTCACGACAAGGTCGAGTCCATTAAACGCTATAGGCATCCACAAATTAAGGACCTAACATATATCATCATTTCTGAACACATTTATATTAACATAGACGTTGACAGTGTTGATCACAGAGGCAGAGGTTTAGGCAGAGGCAGAGGTGACTACATGTATCGGTATGAGGATGTGTCTCTGTGTGTGTGTGTGTGTGAATATGTGAGGATCGTGTATGGATTGATGCGTGACTGGATTGAAAGTCCCAGGGTAAATATTGTTGCAGGTCGGTGCTAGGTGAGGTTGTGGAGTCGG
**************************************************......((((.((....(((((((.........(((.((((((.((((((...(((...((((.((((....)))).))))...)))...))))(((((((.((...............((((......))))....(((........))).)).))))))).............)))))))).)))......)))))))..))))))((((........))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902011
testis
................................................................................................................................................................................................................................................................................................GTTGCAGGTCGGTGCTAGGTG............... 21 0 1 1.00 1 1 0 0
.AGGGGTAGGTTGACGTTGACGAG............................................................................................................................................................................................................................................................................................................ 23 3 1 1.00 1 1 0 0
..........TTGACGTCGACGAGGTGT........................................................................................................................................................................................................................................................................................................ 18 1 4 0.25 1 1 0 0
..........................................................................................................................................................................CAGAGGTGACTCGATGTA........................................................................................................................................ 18 2 4 0.25 1 0 1 0
.......CGGTCGCCGTCGACGAGG........................................................................................................................................................................................................................................................................................................... 18 1 10 0.10 1 0 1 0
..................................................CATTAACCGGTATAAGCATC.............................................................................................................................................................................................................................................................. 20 3 12 0.08 1 1 0 0
.....................................................................................................................................................................................................................................................TGGATCGAAGCGTGACAG............................................................. 18 3 20 0.05 1 1 0 0
......................................................................................................................................................................................................................................................................................................GGACGGTGCTAGGTAAGG............ 18 2 20 0.05 1 1 0 0
.............................................................................................................................................................................................................CTCTGTGTGTGTGTGTGTGT................................................................................................... 20 0 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:9838414-9838737 - dps_3129 ATCCCCAGCCAACG---GCAGCTGCTC-------CA--------------------C---AGC-----------------CAAGTGCT---GTTCCAGCTCAGGTAATTTGC-G------ATATC----------------CGT-------------AGGT----GTTT-------------------AATTCCT---GGA---TTGTATATA---------------------G-----------------------------------------------------------------TA------------------GTAA--AGA----------------------------------------------------------------CTTGTGTAAATAT--AATTGTAT-CTGCA--A-------CTGT------CACAACTAG--TGTCTCCGTCTCCAAATCCGTCTCCGTCTC-CACTG---------------------------------ATGTA-------CATAGCC---A--T---ACT-------C---C-----------------TACACAGAGACACACAC-----------A---------------------CACACACACTTATACACTCC---------------TAGCA---------------------------------------------------------CATACCTAACTACGCACTGACC--------------------TAAC-TTTCAGGGTCCCATTTATAACAACGTCCAGCCACGATCCACTCCAACACC------------------------TCA--------GCC
droPer2 scaffold_61:117430-117763 - ATCCCCAGCCAACG---GCAGCTGCTC-------CA--------------------C---AGC-----------------CAAGTGCT---GTTCCAGCTCAGGTAATTTGC-G------ATATC----------------CGT-------------AGCT----GTTT-------------------AATTCCT---GGA---TTGTACATA---------------------T-------------------------------------------------------------ATAGTA------------------GTCA--AGA----------------------------------------------------------------CTTGTGTAAATAT--AATTGTAT-CTGCA--A-------CTGT------CACAACTAG--TGTCTCCGTCTCCGATTCCGTCTCCGTCTC-CACTG---------------------------------ATGTA-------CATAGCC---A--T---ACT-------C---C-----------------TACACAGAGACACACAC-----------A---------------------CACACACACTTATACACTCC---------------TAGCA-----------CAT---------------------------------------A-CCTATACATAACTACGCACTGACC--------------------TAAC-TTTCAGGGTCCCATTTATAACAACGTCCAGCCACGATCCACTCCAACACC------------------------TCA--------GCC
droWil2 scf2_1100000004762:1072877-1073278 - ATCCCCAGCAACAGGCTGC---AGCTG-C--------AGTTCCAGT---------TGCCC--------CAGCAG------CAACTGCTCCACCATCAGTTCAGGTAATTTGT-G------T--------------------------------------------TCTAAA-TTAA------G-----TTCGAAT---TAT---TTGTATATA---------------------T-----------------------------------------------------------TTGTT-TA------------------GTCACAAGA-TTTTT---------------GT--ATAT-----------ATCAA------------------ATGTGTGTAAATATATAATTGTTT-TTGTA--ATGTACATATAT------AT----ATGGATAT--------------------------A-TA--------------------------------TGTCAGATGTTTAGTATATCTACTCGTATT---TCAAGTGGTAAAAAAAAATCA-CACACACCCACACACAGAGACA-------ACT--TACA-------------ACTTACATACATACATACAT--------AAATACATATGTACAT-----------A----TAC-------ACCCAGCCA-------------------------TAAACACATAACC--ACACTGA----------------------CAAC-TTACAGGGTCCCATTTATAACAACGTTCAGCCACGAACT---CAACCACC---ACC-----------------------------ACC
droVir3 scaffold_13049:8631440-8631802 - dvi_19028 ATCCACAGTCTGC---------------CG---------------------------GCCAG-----CCAGTGT------CCAGTGCT---GCTCCAGCTCAGGTAATTGTGCC------A--------------GC-----CAAGCAACCA-------------GCCCTA-----------ATC-A-GACCCTT---G-A---TTGTATATA---------------------TATATA--------------------------------AATATACGCAAA----------------TA-----CTTAATTAGTTTATCAACTTGA-CTTTT---------------GT--AC----------------------------ATACTGTGTAAATTGTAAATAT--AATTGTTA-CTCA---ATCTGCAACTGT------CA----TTGGGTAT--------------------------C-TGGTGAGG--CACAT-----------------------TTGTA-------AATACAA---T--GCATACT-------C---C----CTA----------AGCACACAAACGCACAC-----------A---------------------TACATTCACC---------------------------------CACACACCCA-------------------------------------------------CTAAC----------------AAGGAATACCCACTGCCAAC-TTGCAGGGTCCCATTTATAACAACGTTCAGCCTCGAACCC---AGCCTCAA-CAGC-----------------------------ACC
droMoj3 scaffold_6680:6710974-6711340 + dmo_2388 ACCCACAGCCAGCT---GC---CAGCCAGG---------------------------C--AGCCA-----G-CG------CGAATGCT---GCTCCAGCTCAGGTAATTGTGCC------A--------------GC-----ACAGCTGCCA-------------GCCCCA-----------CTA-A-GACTCGT---G-A---TTGTATATA---------------------A-------------------------------------------------------------ATA-TATCTCACT---CT-----AG---------------TGTATAT---------AT----AG-----------CTAATCTGTGTAAATACTGTGTAAATTGTAAATAT--AATTGTTA-ATCT---GTCTGCAATTGT------CA----TTGGGTAT--------------------------C-TGGTGAGG--CATTAC---T----------------GTATATA-------TATA-------------TGC-------ACA-------------------------CAA----ACAC-----------A---------------------CACACACACCTACACACTTA---------------CAGCAACCCACCCACCCAC------------------------------------------------------------TCAGCTAACAAAGAATACTCACTACACAC-TTGCAGGGCCCCATTTATAACAACGTTCAACCACGAACCCAGCAACACCC------------------------ACA--------ACC
droGri2 scaffold_15110:4367480-4367960 - ATCCACAGTCAGCT---GCAAC------TGCCCCCACAGCCCCCGTTCCCTCGCATC---AGC--------CAT------CGAATGCT---GCTGCACCACAGGTAAATTGT-G------ATGCC----------------T-----------------------GCCTCAAAC-A------GA--T-ACTTGAT---ATT---TTGTATATA---------------------T----ACAAACACACATACACACACACACACACACACAAATAAACACCAA------T---CTAT----------T---TT-----AGTTG--AAT-T--TA-------TCAAGTTTGT--AA----------------------------ATATTGTGTATATTGTAAATAT--AATTGTAA-CTGTA--A-CTGCAACTGT------C---ATTTG--GG--TAA---------------------AC-TGGTGAGG--CGCACA---T----------------C--TGTA-------TATATAT---A-TT---TAA-------AACA--------CACACACACACACGCATACACA--CAC-----------ACACACACAACACACT------CACACACACTCACACACACATAGACACATGCACAT-----------AGT-CC------------------------------------------------ACCTAAC----------------AGAGAAAACTCACTGCGAACATTGCAGGGTCCCATTTATAACAACGTTCAGCCTCGCAACCAACAACAACC---AATACAACAACAGCAACAACACCA--------GCA
droAna3 scaffold_13337:3547758-3548089 - ATCCGCAATCGGTC---GC---TGCTC-CG---------------------------CCCAGCCA-------TG------CTGCTGCA---GCCCCACCCCAGGTAATTTTT-A---------------------GT-----TT-------------AAG----------A----TTCGTTGTT---------CTG--AAA---CTGTATATA---------------------G-------------------------------------------------------------ATA-AT------------------ATCG--TGT-C--CTGTGTACAT---------AC----ATCCTTTGGAGA----------------------TCTTGTGTAAATATATA-----AT-CTGCC--A-------CTAC------------TGG-CTAC--------------------------C--GAT--------TTCACACC----------------ACATGTA-------CATACTA---T--A---TAT-------AAACCAAATCTA------------------A--GCCCTC-----------A---------------------TATCCTGG----------------CACATGC---------------ACACACAT----------------------------------------TCC-TAACCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAATAACGTCCAGCCACGCACCACCCAACCACCATCAGCA---------------CCACG--------GCA
droBip1 scf7180000396387:56902-57219 + ATCCGCAATCGGTC---GC---TGCCC-CG---------------------------CCCAGCCA-------TG------CTGCTGCA---GCCCCACCACAGGTAATTTTT-G------TT----------------------------------------------CGA----TTCTTTCTTGAT-AA-TCCTGATG-----CTGTATATA---------------------G-------------------------------------------------------------ATA-AT------------------ATCG--TGT-C--CTGTGTACAT---------AA----ATCCTTTGGAGA----------------------TCTTGTGTAAATATATAATTGTCA-TA-------------------------C----------------------------------------------------------T-ACATGTACATATAAGCCATGTA-------TAAACCA---A--A---TCT-------AAGC------------------------------CCCTC-----------A---------------------CATCCCGG----------------CACAAGC---------------ACACACAT----------------------------------------TCC-TAACCTAACC--AAACTGA----------------------CAAC-TTGCAGGGACCCATTTATAATAACGTCCAGCCCCGCACCACCCAACCATC---AGCA---------------CCACA--------GCA
droKik1 scf7180000302486:2415360-2415707 + ATCCCCAGGCCAGT---GCC---------G---------------CCTCCGCGCCGC---AGC-----------------CAGCTGCT---GCCCCAGCTCAGGTAATTAAACCTTTTCGACA-C----------------CGC-------------AAAT----TTTC-------------------CACCAAT---GAA---CTGTATATAGTAAATAGCAAATAGTATATAG---------------------------------------------TAAATACTGTATATATATA-TA------------------GTAG--AGT-T--GT---------------GT--GT-CGTCCCCCG-------------------------GTGATGTGTAAATAT--AATTGTGT-CCGA------------------------AATTTG--CGTCTCA---------------------AT-CGGTGAGG--CGTGCA---T------------------CTGTA-------CATAGCA---A--T---AGC-------A----------------------------------------------------------------------------------------------------------------------------TTCCAG--------CCACGAAAGCCACATCCAAACACCATCCCCCTAACCACACC--GCACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCCCGCCCCGC-----CAC--------------------------------------C
droFic1 scf7180000453807:983427-983726 + ATCCGCAGAGCCACG---CC------CCCG---------------------------CTCCC-----GCAGCCGCCCACTCTGCTGCC---CCACCACCACAGGTAATTCTC-G------C----------------------------------------------TCCG-----------ATT-T-AACCGAT---GAA---TTGTACATACCACATA----------------------------------------------------CATATAC--------TATA---CTATA-TA------------------GTCG--AGT-------------------------GTA------------------------------------CCAATGTAAATAT--AATTGTAT-CCGCA--A-------CTGC------CACAATTTG--TATCTCG---------------------TC-CGGTGAGAGGCACAAA---G----------------CCATGTA-------CATAGCA---T--A------------------------------------------------------------------------------------------------------------------------------------CACACATTCCTGTCCCCCCTCCC-------------------------CAAAAACCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCGCGCAGC-------------------------------------------------
droEle1 scf7180000490564:619832-620160 + ATCCGCAGGCCCA---------------CG---------------------------CCCCC-----TCACCTG------CTGCTGC-------CCACCACAGGTAAGGCAT----------ATC----------------CA------CCAACCCTCTGGCCCTGACC-----CT------TTG-AAAACCGAT---GAA---TTGTACATA---------------------C------------------------------------------------------------TATA-TA------------------GTCA--TGT-T--TC---------------GT--GTAC-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGC------CACAATTTG--TATCTCA---------------------TC-CGGTGAGG--CATAAA---G----------------CCATGTA-------CATAGCA---T--T---TGG-------AACA------------------------CCA--CCCCCC-----------A---------------------CCACCCCC----------------CACCAGC--------ACACAA--CAGACAT---------------------------------------CACCCCCACCTAACC--GCACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCGCCCAACCAC--------------------------------------C
droRho1 scf7180000776514:20492-20811 + ATCCGCAGGGCCAGG---GC------CACG---------------------------CCCCC-----------G------CAGCTGCT---GCCCCACCCCAGGTAATGCAC-C------C---------------------CC----------CCTC-GC--CTGCC------CT------TTG-T-AACCGAT---GAA---TTGTACATA---------------------C------------------------------------------------------------TATA-TA------------------GTCA--AGT-T--TC---------------GT--GTAC-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGC------CACAATTTG--TATCTCA---------------------TC-CGGTGAGG--CATAAA---G----------------CCATGTA-------CATAGCA---T--T---CGG-------ACAC-------------------------------CCAC-----------A---------------------TACCCCAGCC---------------------------------CAAACACCCAA--------------------------------------TCTCC--CACCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCGCCCAACCACCA------------------------CAAAATG---TCT
droBia1 scf7180000302428:7945445-7945765 - ATCCCCAGGCTCCGG---CCCA------GGCCC----AGGCCC-----------ATGCGCCC-----------G------CGGCAGCT---GCCCCACCCCAGGTAATTGCC-C------ATG--------------------G-------------AAGC----CCCCCA-----------CTA-T-AGCCAAT---GAA---CTGTACATA---------------------C-------------------------------------------------------------ATA-TA------------------GTCA--AGT-T--A----------------------------------------------------------CCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGCCGCACACACAATTCG--TATCTCA---------------------TC-CGGTGAGG--CATAAA---G----------------CCATGTA-------CATAGCA---T--T---TGG-------AGAC-----------------------------C-CCA---ACC----------------------------CACCCA---------AGGCC---------------CAG-------------CAT---------------------------------------CTCCCACACCTAACC--AAACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCACC---AGC-----------------------------ACC
droTak1 scf7180000414372:11726-12038 - ATCCGCAGGCTCAGG---CACA------GGCCC-AC--------------------C--------------TAC------CCGCTACT---GCCCCACCCCAGGTAATTTCC-C------AAA---------------AACCCC-----------------------CCCC---CT------TT----GACCGAT---GAA---TTGTACATACTACA-----------------------------------------------------------------------------TATA-TA------------------GTCA--AGT-T-AAC---------------GTACGTAC-----------G----------------------TCGAGTGTAAATAT--AATTGTAC-CCGCCACA-------CTGC------CACAATTCG--TATCTCA---------------------TT-CGGTGAGG--CATAAA---G----------------CCATGTA-------CATAGCA---T--T---TGG-------AAGT-----------------------------C-CCA---ACACACCG------------------------------------------------------------------------CCCAT---------------------------------------CTCCCGCACCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCACCA-----------------------------------CA
droEug1 scf7180000409711:1680619-1680954 + ATCCTCAGGCCCA---------------CG---------------------------CACCC-----ACC---G------CAGCTGCT---GCCCCACCTCAGGTAATTTTC-C------CCA-------------AAAGC-CC----------CCTAAGT-----CTCAA-CCCA------GTT-T-AACCGAT---GAA---TTGTACATACAACATAGTA-----TATATAG-----------------------------------------------------ATATATATATA-TA------------------GTCA--AGTAT--TC---------------GT--GTAT-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGC------CACAATTTG--TATCTCA---------------------TC-CGGTGAGG--CAGAAA---GC---------------ACATGTA-------CATAGCA---T--T---TGG-------ACAA-----------------------------C-CCAGAAACC--C---A---------------------------------------------------------------------TCACCT---------------------------------------CTCC-CAACCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCACCA-----------------------------------CA
dm3 chr3L:9823839-9824143 + ATCCGCAGGCCCA---------------CG---------------------------CTCCC-----ACAGCAG------CAGCTGCC---GCTCCACCTCAGGTAAATTGC-C------A--------------AC-----CC-------------AAGT----GCTCAA-----------TTG-A-AACCAAT---GAA---TTGTATATA---------------------C-----------------------------------------------------------ATATA-TA------------------GTCA--AGT-T--TC---------------GT--GTGC-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGA------CACAATTTG--TATCTCA---------------------TCCCGGTGGGG--CATTAA-ACG----------------CCATGTA-------CATAGCA---T--T---TGG-------AGAC-------------------------------CCA---ACT--CTGC--------------------------------------------------------------------ACTCCCAT--------------------------------------TTTCC-CAGCCTAACC--ACACTGA----------------------CAAC-TTTCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAAACAC--------------------------------------C
droSim2 3l:9583575-9583876 + dsi_19225 ATCCGCAGGCCCA---------------CG---------------------------CCCCC-----ACAGCAG------CAGCTGCC---GCTCCACCTCAGGTAAATTGC-C------A--------------GC-----CC-------------AAGT----GCTCAA-----------TTG-A-AACCAAT---GAA---TTGTATATA---------------------C-------------------------------------------------------------ATA-TA------------------GTCA--AGT-T--TC---------------GT--GTGC-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGA------CACAATTTG--TATCTCA---------------------TCCCGGTGGGG--CATTAA-ACG----------------CCATGTA-------CATAGCA---T--T---TGG-------AGAC-------------------------------CCG---ACT--CCGC--------------------------------------------------------------------ACTCCCAT---------------------------------------TTCC-CAGCCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCAC--------------------------------------C
droSec2 scaffold_0:2056705-2057006 + ATCCGCAGGCCCA---------------CG---------------------------CCCCC-----ACAGCAG------CAGCTGCC---GCTCCACCTCAGGTAAATTGC-C------A--------------GC-----CC-------------AAGT----GCTCAA-----------TTG-A-AACCAAT---GAA---TTGTATATA---------------------C-------------------------------------------------------------ATA-TA------------------GTCA--AGT-T--TC---------------GT--GTGC-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGA------CACAATTTG--TATCTCA---------------------TCCCGGTGGGG--CATTAA-ACG----------------CCATGTA-------CATAGCA---T--T---TGG-------AGAC-------------------------------CCA---ACT--CCGC--------------------------------------------------------------------ACTCCCAT---------------------------------------TTCC-CAGCCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCAC--------------------------------------C
droYak3 3L:9798516-9798874 + ATCCCCAGGCCCAGG---CC------CACG---------------------------CCCCC--AGCACAGCAG------CGGCTGCC---GCGCCACCTCAGGTAAATGAT-G----CAATGCCCGCTTTTCCAGC-----CA--------------A---------------------------A-AACCAAT---GTACCAATGTATATAGAACACA----------------------------------------------------C-----------------A---CTATA-TA------------------GTCGATAGT-T--TC---------------GT--GTGC-----------G----------------------TCGAGTGTAAATAT--AAATGTATACTGCC--A-------CTGC------CACAAATTG--TTGCTCA---------------------TC-CGGTGGGG--CATTAAAACG----------------CCATGTA-------CATAGCA---T--T---TGG-------AGGT-------------------------------CCA---ACT--CCGCA---------------------CTTCGCACTC---------------------------------CACACTCCCAT---------------------------------------TCCC-CAGCCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAGCCACCA------------------------CAAAATGCCTACC
droEre2 scaffold_4784:9812645-9812943 + ATCCGCAGGGCCA---------------CG---------------------------CCCCC-----ACAGCAG------CGGCTGCC---GCTCCACCTCAGGTAATT-GC-C------ATACC----------------CG---------------C-T----TTTCCA-----------GTT-A-AGCCAAT---GAT---TTGTATATAGAACACA--------------------------------------------------------------------------CTATA-TA------------------GTCG--AGT-T--TC---------------GT--GTAC-----------G----------------------TCGAGTGTAAATAT--AAATGTAT-CT-------------------------CAACTTG--TATCTCA---------------------TC-CGGTGGGG--CATTAAAACG----------------CCATGTA-------CATAGCA---T--C---TGG-------AGAC-------------------------------CCA---ACT--CCGT--------------------------------------------------------------------ACTCCCAT---------------------------------------TTCC-CAGCCTAACC--ACACTGA----------------------CAAC-TTGCAGGGCCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCAC--------------------------------------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ATCCCCAGCCAACG---GCAGCTGCTC-------CA--------------------C---AGC-----------------CAAGTGCT---GTTCCAGCTCAGGTAATTTGC-G------ATATC----------------CGT-------------AGGT----GTTT-------------------AATTCCT---GGA---TTGTATATA---------------------G-----------------------------------------------------------------TA------------------GTAA--AGA----------------------------------------------------------------CTTGTGTAAATAT--AATTGTAT-CTGCA--A-------CTGT------CACAACTAG--TGTCTCCGTCTCCAAATCCGTCTCCGTCTC-CACTG---------------------------------ATGTA-------CATAGCC---A--T---ACT-------C---C-----------------TACACAGAGACACACAC-----------A---------------------CACACACACTTATACACTCC---------------TAGCA---------------------------------------------------------CATACCTAACTACGCACTGACC--------------------TAAC-TTTCAGGGTCCCATTTATAACAACGTCCAGCCACGATCCACTCCAACACC------------------------TCA--------GCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.TCCCCAGCCAACG---GCAGCTGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010000
....CCAGCCAACG---GCAGCTGCTC-------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
.....CAGCCAACG---GCAGCTGCTC-------CA--------------------C---A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
.....................CTGCTC-------CA--------------------C---AGC-----------------CAAGTGCT---GTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....CAGCCAACG---GCAGCTGCTC-------CA--------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
droPer2
ATCCCCAGCCAACG---GCAGCTGCTC-------CA--------------------C---AGC-----------------CAAGTGCT---GTTCCAGCTCAGGTAATTTGC-G------ATATC----------------CGT-------------AGCT----GTTT-------------------AATTCCT---GGA---TTGTACATA---------------------T-------------------------------------------------------------ATAGTA------------------GTCA--AGA----------------------------------------------------------------CTTGTGTAAATAT--AATTGTAT-CTGCA--A-------CTGT------CACAACTAG--TGTCTCCGTCTCCGATTCCGTCTCCGTCTC-CACTG---------------------------------ATGTA-------CATAGCC---A--T---ACT-------C---C-----------------TACACAGAGACACACAC-----------A---------------------CACACACACTTATACACTCC---------------TAGCA-----------CAT---------------------------------------A-CCTATACATAACTACGCACTGACC--------------------TAAC-TTTCAGGGTCCCATTTATAACAACGTCCAGCCACGATCCACTCCAACACC------------------------TCA--------GCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................GCAGCTGCTC-------CA--------------------C---AGC-----------------CAAGTGCT---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003300000
..........AACG---GCAGCTGCTC-------CA--------------------C---A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droWil2
ATCCCCAGCAACAGGCTGC---AGCTG-C--------AGTTCCAGT---------TGCCC--------CAGCAG------CAACTGCTCCACCATCAGTTCAGGTAATTTGT-G------T--------------------------------------------TCTAAA-TTAA------G-----TTCGAAT---TAT---TTGTATATA---------------------T-----------------------------------------------------------TTGTT-TA------------------GTCACAAGA-TTTTT---------------GT--ATAT-----------ATCAA------------------ATGTGTGTAAATATATAATTGTTT-TTGTA--ATGTACATATAT------AT----ATGGATAT--------------------------A-TA--------------------------------TGTCAGATGTTTAGTATATCTACTCGTATT---TCAAGTGGTAAAAAAAAATCA-CACACACCCACACACAGAGACA-------ACT--TACA-------------ACTTACATACATACATACAT--------AAATACATATGTACAT-----------A----TAC-------ACCCAGCCA-------------------------TAAACACATAACC--ACACTGA----------------------CAAC-TTACAGGGTCCCATTTATAACAACGTTCAGCCACGAACT---CAACCACC---ACC-----------------------------ACCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................GTTCCAGT---------TGCCC--------CAGCAG------CAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100001
.......GCAACAGGCTGC---AGCTG-C--------AGTTCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
droVir3
ATCCACAGTCTGC---------------CG---------------------------GCCAG-----CCAGTGT------CCAGTGCT---GCTCCAGCTCAGGTAATTGTGCC------A--------------GC-----CAAGCAACCA-------------GCCCTA-----------ATC-A-GACCCTT---G-A---TTGTATATA---------------------TATATA--------------------------------AATATACGCAAA----------------TA-----CTTAATTAGTTTATCAACTTGA-CTTTT---------------GT--AC----------------------------ATACTGTGTAAATTGTAAATAT--AATTGTTA-CTCA---ATCTGCAACTGT------CA----TTGGGTAT--------------------------C-TGGTGAGG--CACAT-----------------------TTGTA-------AATACAA---T--GCATACT-------C---C----CTA----------AGCACACAAACGCACAC-----------A---------------------TACATTCACC---------------------------------CACACACCCA-------------------------------------------------CTAAC----------------AAGGAATACCCACTGCCAAC-TTGCAGGGTCCCATTTATAACAACGTTCAGCCTCGAACCC---AGCCTCAA-CAGC-----------------------------ACCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................GTGT------CCAGTGCT---GCTCCAGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....CAGTCTGC---------------CG---------------------------GCCAG-----CCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
....ACAGTCTGC---------------CG---------------------------GCCAG-----CCAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAACCC---AGCCTCAA-CAGC-----------------------------ACC2311.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................TGT------CCAGTGCT---GCTCCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.002020000000000000000000000000000000000000000000000000000000000000
.......GTCTGC---------------CG---------------------------GCCAG-----CCAGTGT------CCAGTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
......AGTCTGC---------------CG---------------------------GCCAG-----CCAGTGT------CCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000100
......AGTCTGC---------------CG---------------------------GCCAG-----CCAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCGAACCC---AGCCTCAA-CAGC-----------------------------...2311.001000100000000000000000000000000000000000000000000000000000000000
.........CTGC---------------CG---------------------------GCCAG-----CCAGTGT------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
ATCCACAGTCTGC---------------CG---------------------------GCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000100000
............................................................AG-----CCAGTGT------CCAGTGCT---GCTCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................GTGCT---GCTCCAGCTCAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.TCCACAGTCTGC---------------CG---------------------------GCCAG-----CC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...CACAGTCTGC---------------CG---------------------------GCCAG-----CCAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GCATACT-------C---C----CTA----------AGCACAC...................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
droMoj3
ACCCACAGCCAGCT---GC---CAGCCAGG---------------------------C--AGCCA-----G-CG------CGAATGCT---GCTCCAGCTCAGGTAATTGTGCC------A--------------GC-----ACAGCTGCCA-------------GCCCCA-----------CTA-A-GACTCGT---G-A---TTGTATATA---------------------A-------------------------------------------------------------ATA-TATCTCACT---CT-----AG---------------TGTATAT---------AT----AG-----------CTAATCTGTGTAAATACTGTGTAAATTGTAAATAT--AATTGTTA-ATCT---GTCTGCAATTGT------CA----TTGGGTAT--------------------------C-TGGTGAGG--CATTAC---T----------------GTATATA-------TATA-------------TGC-------ACA-------------------------CAA----ACAC-----------A---------------------CACACACACCTACACACTTA---------------CAGCAACCCACCCACCCAC------------------------------------------------------------TCAGCTAACAAAGAATACTCACTACACAC-TTGCAGGGCCCCATTTATAACAACGTTCAACCACGAACCCAGCAACACCC------------------------ACA--------ACCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....ACAGCCAGCT---GC---CAGCCAGG---------------------------C--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004300010
.....CAGCCAGCT---GC---CAGCCAGG---------------------------C--AGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002101000
......AGCCAGCT---GC---CAGCCAGG---------------------------C--AGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................AGCCAGG---------------------------C--AGCCA-----G-CG------CGAATGCT---GCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.....CAGCCAGCT---GC---CAGCCAGG---------------------------C--.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACCCAGCAACACCC------------------------ACA--------AC.2111.001010000
............................................................AGCCA-----G-CG------CGAATGCT---GCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....ACAGCCAGCT---GC---CAGCCAGG---------------------------C--AGCCA-----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
........................GCCAGG---------------------------C--AGCCA-----G-CG------CGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
....ACAGCCAGCT---GC---CAGCCAGG---------------------------C--AGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....CAGCCAGCT---GC---CAGCCAGG---------------------------C--A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATA-------TATA-------------TGC-------ACA-------------------------CA..................................................................................................................................................................................................................................................................................18200.051100000
droGri2
ATCCACAGTCAGCT---GCAAC------TGCCCCCACAGCCCCCGTTCCCTCGCATC---AGC--------CAT------CGAATGCT---GCTGCACCACAGGTAAATTGT-G------ATGCC----------------T-----------------------GCCTCAAAC-A------GA--T-ACTTGAT---ATT---TTGTATATA---------------------T----ACAAACACACATACACACACACACACACACACAAATAAACACCAA------T---CTAT----------T---TT-----AGTTG--AAT-T--TA-------TCAAGTTTGT--AA----------------------------ATATTGTGTATATTGTAAATAT--AATTGTAA-CTGTA--A-CTGCAACTGT------C---ATTTG--GG--TAA---------------------AC-TGGTGAGG--CGCACA---T----------------C--TGTA-------TATATAT---A-TT---TAA-------AACA--------CACACACACACACGCATACACA--CAC-----------ACACACACAACACACT------CACACACACTCACACACACATAGACACATGCACAT-----------AGT-CC------------------------------------------------ACCTAAC----------------AGAGAAAACTCACTGCGAACATTGCAGGGTCCCATTTATAACAACGTTCAGCCTCGCAACCAACAACAACC---AATACAACAACAGCAACAACACCA--------GCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAACAACAGCAACAACA..............20190.05110
droAna3
ATCCGCAATCGGTC---GC---TGCTC-CG---------------------------CCCAGCCA-------TG------CTGCTGCA---GCCCCACCCCAGGTAATTTTT-A---------------------GT-----TT-------------AAG----------A----TTCGTTGTT---------CTG--AAA---CTGTATATA---------------------G-------------------------------------------------------------ATA-AT------------------ATCG--TGT-C--CTGTGTACAT---------AC----ATCCTTTGGAGA----------------------TCTTGTGTAAATATATA-----AT-CTGCC--A-------CTAC------------TGG-CTAC--------------------------C--GAT--------TTCACACC----------------ACATGTA-------CATACTA---T--A---TAT-------AAACCAAATCTA------------------A--GCCCTC-----------A---------------------TATCCTGG----------------CACATGC---------------ACACACAT----------------------------------------TCC-TAACCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAATAACGTCCAGCCACGCACCACCCAACCACCATCAGCA---------------CCACG--------GCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......ATCGGTC---GC---TGCTC-CG---------------------------CCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1917.007700000
....GCAATCGGTC---GC---TGCTC-CG---------------------------CCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.007700000
ATCCGCAATCGGTC---GC---TGCTC-CG---------------------------CCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004300001
...CGCAATCGGTC---GC---TGCTC-CG---------------------------CCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.004300001
.TCCGCAATCGGTC---GC---TGCTC-CG---------------------------CCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003300000
.......ATCGGTC---GC---TGCTC-CG---------------------------CCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
........TCGGTC---GC---TGCTC-CG---------------------------CCCAGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
........TCGGTC---GC---TGCTC-CG---------------------------CCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
ATCCGCAATCGGTC---GC---TGCTC-CG---------------------------CCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000002
..........GGTC---GC---TGCTC-CG---------------------------CCCAGCCA-------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
......AATCGGTC---GC---TGCTC-CG---------------------------CCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
......................TGCTC-CG---------------------------CCCAGCCA-------TG------CTGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
.......ATCGGTC---GC---TGCTC-CG---------------------------CCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
ATCCGCAATCGGTC---GC---TGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
..CCGCAATCGGTC---GC---TGCTC-CG---------------------------CCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002100001
...CGCAATCGGTC---GC---TGCTC-CG---------------------------CCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002100001
............................................................AGCCA-------TG------CTGCTGCA---GCCCCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
ATCCGCAATCGGTC---GC---TGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........GGTC---GC---TGCTC-CG---------------------------CCCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........CGGTC---GC---TGCTC-CG---------------------------CCCAGCCA-------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..CCGCAATCGGTC---GC---TGCTC-CG---------------------------CCCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.TCCGCAATCGGTC---GC---TGCTC-CG---------------------------CCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAACGTCCAGCCACGCACCACCCA............................................2611.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAACCACCATCAGCA---------------CCACG--------GC.2611.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATAACGTCCAGCCACGCAC..................................................2211.001010000
......AATCGGTC---GC---TGCTC-CG---------------------------CCCAGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...............................................................CA-------TG------CTGCTGCA---GCCCCACCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
...CGCAATCGGTC---GC---TGCTC-CG---------------------------CCCAGCCA-------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
................................................................A-------TG------CTGCTGCA---GCCCCACCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..CCGCAATCGGTC---GC---TGCTC-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...CGCAATCGGTC---GC---TGCTC-CG---------------------------CC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......AATCGGTC---GC---TGCTC-CG---------------------------CC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................................CA-------TG------CTGCTGCA---GCCCCACCCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
....GCAATCGGTC---GC---TGCTC-CG---------------------------CCCAGCCA-------T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
........TCGGTC---GC---TGCTC-CG---------------------------CCCAGCCA-------TG------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..CCGCAATCGGTC---GC---TGCTC-CG---------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................................................A-------TG------CTGCTGCA---GCCCCACCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
........TCGGTC---GC---TGCTC-CG---------------------------CCCAGCCA-------TG------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
ATCCGCAATCGGTC---GC---TGCTC-C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............................................................AGCCA-------TG------CTGCTGCA---GCCCCACCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................................TG------CTGCTGCA---GCCCCACCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................AGCCA-------TG------CTGCTGCA---GCCCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...CGCAATCGGTC---GC---TGCTC-CG---------------------------CCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.......ATCGGTC---GC---TGCTC-CG---------------------------CCCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........GGTC---GC---TGCTC-CG---------------------------CCCAGCCA-------TG------CT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..CCGCAATCGGTC---GC---TGCTC-CG---------------------------CCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTCCAGCCACGCACCACCCA............................................2211.001100000
.................................................................................TGCTGCA---GCCCCACCCCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.................GC---TGCTC-CG---------------------------CCCAGCCA-------TG------CTGCTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.TCCGCAATCGGTC---GC---TGCTC-CG---------------------------CCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.........CGGTC---GC---TGCTC-CG---------------------------CCCAGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................AGCCA-------TG------CTGCTGCA---GCCCCACCCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....CAATCGGTC---GC---TGCTC-CG---------------------------CCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................GCCA-------TG------CTGCTGCA---GCCCCACCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......ATCGGTC---GC---TGCTC-CG---------------------------CCCAGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
droBip1
ATCCGCAATCGGTC---GC---TGCCC-CG---------------------------CCCAGCCA-------TG------CTGCTGCA---GCCCCACCACAGGTAATTTTT-G------TT----------------------------------------------CGA----TTCTTTCTTGAT-AA-TCCTGATG-----CTGTATATA---------------------G-------------------------------------------------------------ATA-AT------------------ATCG--TGT-C--CTGTGTACAT---------AA----ATCCTTTGGAGA----------------------TCTTGTGTAAATATATAATTGTCA-TA-------------------------C----------------------------------------------------------T-ACATGTACATATAAGCCATGTA-------TAAACCA---A--A---TCT-------AAGC------------------------------CCCTC-----------A---------------------CATCCCGG----------------CACAAGC---------------ACACACAT----------------------------------------TCC-TAACCTAACC--AAACTGA----------------------CAAC-TTGCAGGGACCCATTTATAATAACGTCCAGCCCCGCACCACCCAACCATC---AGCA---------------CCACA--------GCASizeHit CountTotal NormTotal
No Reads
droKik1
ATCCCCAGGCCAGT---GCC---------G---------------CCTCCGCGCCGC---AGC-----------------CAGCTGCT---GCCCCAGCTCAGGTAATTAAACCTTTTCGACA-C----------------CGC-------------AAAT----TTTC-------------------CACCAAT---GAA---CTGTATATAGTAAATAGCAAATAGTATATAG---------------------------------------------TAAATACTGTATATATATA-TA------------------GTAG--AGT-T--GT---------------GT--GT-CGTCCCCCG-------------------------GTGATGTGTAAATAT--AATTGTGT-CCGA------------------------AATTTG--CGTCTCA---------------------AT-CGGTGAGG--CGTGCA---T------------------CTGTA-------CATAGCA---A--T---AGC-------A----------------------------------------------------------------------------------------------------------------------------TTCCAG--------CCACGAAAGCCACATCCAAACACCATCCCCCTAACCACACC--GCACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCCCGCCCCGC-----CAC--------------------------------------CSizeHit CountTotal NormTotal
No Reads
droFic1
ATCCGCAGAGCCACG---CC------CCCG---------------------------CTCCC-----GCAGCCGCCCACTCTGCTGCC---CCACCACCACAGGTAATTCTC-G------C----------------------------------------------TCCG-----------ATT-T-AACCGAT---GAA---TTGTACATACCACATA----------------------------------------------------CATATAC--------TATA---CTATA-TA------------------GTCG--AGT-------------------------GTA------------------------------------CCAATGTAAATAT--AATTGTAT-CCGCA--A-------CTGC------CACAATTTG--TATCTCG---------------------TC-CGGTGAGAGGCACAAA---G----------------CCATGTA-------CATAGCA---T--A------------------------------------------------------------------------------------------------------------------------------------CACACATTCCTGTCCCCCCTCCC-------------------------CAAAAACCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCGCGCAGC-------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATCCGCAGGCCCA---------------CG---------------------------CCCCC-----TCACCTG------CTGCTGC-------CCACCACAGGTAAGGCAT----------ATC----------------CA------CCAACCCTCTGGCCCTGACC-----CT------TTG-AAAACCGAT---GAA---TTGTACATA---------------------C------------------------------------------------------------TATA-TA------------------GTCA--TGT-T--TC---------------GT--GTAC-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGC------CACAATTTG--TATCTCA---------------------TC-CGGTGAGG--CATAAA---G----------------CCATGTA-------CATAGCA---T--T---TGG-------AACA------------------------CCA--CCCCCC-----------A---------------------CCACCCCC----------------CACCAGC--------ACACAA--CAGACAT---------------------------------------CACCCCCACCTAACC--GCACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCGCCCAACCAC--------------------------------------CSizeHit CountTotal NormTotal
No Reads
droRho1
ATCCGCAGGGCCAGG---GC------CACG---------------------------CCCCC-----------G------CAGCTGCT---GCCCCACCCCAGGTAATGCAC-C------C---------------------CC----------CCTC-GC--CTGCC------CT------TTG-T-AACCGAT---GAA---TTGTACATA---------------------C------------------------------------------------------------TATA-TA------------------GTCA--AGT-T--TC---------------GT--GTAC-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGC------CACAATTTG--TATCTCA---------------------TC-CGGTGAGG--CATAAA---G----------------CCATGTA-------CATAGCA---T--T---CGG-------ACAC-------------------------------CCAC-----------A---------------------TACCCCAGCC---------------------------------CAAACACCCAA--------------------------------------TCTCC--CACCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCGCCCAACCACCA------------------------CAAAATG---TCTSizeHit CountTotal NormTotal
No Reads
droBia1
ATCCCCAGGCTCCGG---CCCA------GGCCC----AGGCCC-----------ATGCGCCC-----------G------CGGCAGCT---GCCCCACCCCAGGTAATTGCC-C------ATG--------------------G-------------AAGC----CCCCCA-----------CTA-T-AGCCAAT---GAA---CTGTACATA---------------------C-------------------------------------------------------------ATA-TA------------------GTCA--AGT-T--A----------------------------------------------------------CCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGCCGCACACACAATTCG--TATCTCA---------------------TC-CGGTGAGG--CATAAA---G----------------CCATGTA-------CATAGCA---T--T---TGG-------AGAC-----------------------------C-CCA---ACC----------------------------CACCCA---------AGGCC---------------CAG-------------CAT---------------------------------------CTCCCACACCTAACC--AAACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCACC---AGC-----------------------------ACCSizeHit CountTotal NormTotal
No Reads
droTak1
ATCCGCAGGCTCAGG---CACA------GGCCC-AC--------------------C--------------TAC------CCGCTACT---GCCCCACCCCAGGTAATTTCC-C------AAA---------------AACCCC-----------------------CCCC---CT------TT----GACCGAT---GAA---TTGTACATACTACA-----------------------------------------------------------------------------TATA-TA------------------GTCA--AGT-T-AAC---------------GTACGTAC-----------G----------------------TCGAGTGTAAATAT--AATTGTAC-CCGCCACA-------CTGC------CACAATTCG--TATCTCA---------------------TT-CGGTGAGG--CATAAA---G----------------CCATGTA-------CATAGCA---T--T---TGG-------AAGT-----------------------------C-CCA---ACACACCG------------------------------------------------------------------------CCCAT---------------------------------------CTCCCGCACCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCACCA-----------------------------------CASizeHit CountTotal NormTotal
No Reads
droEug1
ATCCTCAGGCCCA---------------CG---------------------------CACCC-----ACC---G------CAGCTGCT---GCCCCACCTCAGGTAATTTTC-C------CCA-------------AAAGC-CC----------CCTAAGT-----CTCAA-CCCA------GTT-T-AACCGAT---GAA---TTGTACATACAACATAGTA-----TATATAG-----------------------------------------------------ATATATATATA-TA------------------GTCA--AGTAT--TC---------------GT--GTAT-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGC------CACAATTTG--TATCTCA---------------------TC-CGGTGAGG--CAGAAA---GC---------------ACATGTA-------CATAGCA---T--T---TGG-------ACAA-----------------------------C-CCAGAAACC--C---A---------------------------------------------------------------------TCACCT---------------------------------------CTCC-CAACCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCACCA-----------------------------------CASizeHit CountTotal NormTotal
No Reads
dm3
ATCCGCAGGCCCA---------------CG---------------------------CTCCC-----ACAGCAG------CAGCTGCC---GCTCCACCTCAGGTAAATTGC-C------A--------------AC-----CC-------------AAGT----GCTCAA-----------TTG-A-AACCAAT---GAA---TTGTATATA---------------------C-----------------------------------------------------------ATATA-TA------------------GTCA--AGT-T--TC---------------GT--GTGC-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGA------CACAATTTG--TATCTCA---------------------TCCCGGTGGGG--CATTAA-ACG----------------CCATGTA-------CATAGCA---T--T---TGG-------AGAC-------------------------------CCA---ACT--CTGC--------------------------------------------------------------------ACTCCCAT--------------------------------------TTTCC-CAGCCTAACC--ACACTGA----------------------CAAC-TTTCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAAACAC--------------------------------------CSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................GCAG------CAGCTGCC---GCTCCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002500000100000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GCAG------CAGCTGCC---GCTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001600000200000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACAGCAG------CAGCTGCC---GCTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................AGCTGCC---GCTCCACCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACAGCAG------CAGCTGCC---GCTCCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................G------CAGCTGCC---GCTCCACCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................................................................AG------CAGCTGCC---GCTCCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCAGGCCCA---------------CG---------------------------CTCCC-----ACAGCAG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................AG------CAGCTGCC---GCTCCACCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CCC-----ACAGCAG------CAGCTGCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AGCAG------CAGCTGCC---GCTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GCAG------CAGCTGCC---GCTCCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................G------CAGCTGCC---GCTCCACCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CG---------------------------CTCCC-----ACAGCAG------CAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GCAG------CAGCTGCC---GCTCCACCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CG---------------------------CTCCC-----ACAGCAG------CAGCTGCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CAGCAG------CAGCTGCC---GCTCCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AGCAG------CAGCTGCC---GCTCCACCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AGCAG------CAGCTGCC---GCTCCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................AG------CAGCTGCC---GCTCCACCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CA---------------CG---------------------------CTCCC-----ACAGCAG------CAGCTGCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GGCCCA---------------CG---------------------------CTCCC-----ACAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CAGCAG------CAGCTGCC---GCTCCACCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CCC-----ACAGCAG------CAGCTGCC---GCTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGCCCA---------------CG---------------------------CTCCC-----ACAGCAG------CAGCTGCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCCGCAGGCCCA---------------CG---------------------------CTCCC-----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................G------CAGCTGCC---GCTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCA---------------CG---------------------------CTCCC-----ACAGCAG------CAGCTGCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCAGGCCCA---------------CG---------------------------CTCCC-----ACAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCCGCAGGCCCA---------------CG---------------------------CTCCC-----ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGCAGGCCCA---------------CG---------------------------CTCCC-----ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CAGCAG------CAGCTGCC---GCTCCACCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CCGCAGGCCCA---------------CG---------------------------CTCCC-----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............A---------------CG---------------------------CTCCC-----ACAGCAG------CAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CTCAA-----------TTG-A-AACCAAT---GAA---TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCCC-----ACAGCAG------CAGCTGCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACAACGTCCAGCCAC......................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................AGCTGCC---GCTCCACCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATTTATAACAACGTCCA...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGG-------AGAC-------------------------------CCA---ACT--CTGC--------------------------------------------------------------------ACTCCCA...................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCCC-----ACAGCAG------CAGCTGCC---GCTCCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CGCAGGCCCA---------------CG---------------------------CTCCC-----AC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GCAG------CAGCTGCC---GCTCCACCTCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................C-----ACAGCAG------CAGCTGCC---GCTCCACCTCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................C-----ACAGCAG------CAGCTGCC---GCTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CCC-----ACAGCAG------CAGCTGCC---GCTCCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CA---------------CG---------------------------CTCCC-----ACAGCAG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................GCAG------CAGCTGCC---GCTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CAGCAG------CAGCTGCC---GCTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............A---------------CG---------------------------CTCCC-----ACAGCAG------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGCCCA---------------CG---------------------------CTCCC-----ACAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCAGGCCCA---------------CG---------------------------CTCCC-----AC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCCGCAGGCCCA---------------CG---------------------------CTCCC-----A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................AG------CAGCTGCC---GCTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACAACGTCCAGCCACG.....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................AGCAG------CAGCTGCC---GCTCCACCTCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CCGCAGGCCCA---------------CG---------------------------CTCCC-----ACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATTTATAACAACGTCCAGCCAC......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
......................................................................GCAG------CAGCTGCC---GCTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1841.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGCCCA---------------CG---------------------------CTCCC-----ACAGCAG------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................AGCAG------CAGCTGCC---GCTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCAGGCCCA---------------CG---------------------------CTCCC-----ACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CAGGCCCA---------------CG---------------------------CTCCC-----ACAGCAG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACAGCAG------CAGCTGCC---GCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACAGCAG------CAGCTGCC---GCTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................ACAGCAG------CAGCTGCC---GCTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
ATCCGCAGGCCCA---------------CG---------------------------CTCCC-----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................C-----ACAGCAG------CAGCTGCC---GCTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................G---------------------------CTCCC-----ACAGCAG------CAGCTGCC---GCTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............A---------------CG---------------------------CTCCC-----ACAGCAG------CAGCTGCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CTCCC-----ACAGCAG------CAGCTGCC---GCTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............A---------------CG---------------------------CTCCC-----ACAGCAG------CAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AGGCCCA---------------CG---------------------------CTCCC-----ACAGCAG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CCGCAGGCCCA---------------CG---------------------------CTCCC-----A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CG---------------------------CTCCC-----ACAGCAG------CAGCTGCC---GCTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CAGCAG------CAGCTGCC---GCTCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCCCA---------------CG---------------------------CTCCC-----ACAGCAG------CAGCTGCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CC-----ACAGCAG------CAGCTGCC---GCTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CCCA---------------CG---------------------------CTCCC-----ACAGCAG------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCCAGCCACGCACC.................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................CAG------CAGCTGCC---GCTCCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CCC-----ACAGCAG------CAGCTGCC---GCTCCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GCC---GCTCCACCTCAGGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATCCGCAGGCCCA---------------CG---------------------------CCCCC-----ACAGCAG------CAGCTGCC---GCTCCACCTCAGGTAAATTGC-C------A--------------GC-----CC-------------AAGT----GCTCAA-----------TTG-A-AACCAAT---GAA---TTGTATATA---------------------C-------------------------------------------------------------ATA-TA------------------GTCA--AGT-T--TC---------------GT--GTGC-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGA------CACAATTTG--TATCTCA---------------------TCCCGGTGGGG--CATTAA-ACG----------------CCATGTA-------CATAGCA---T--T---TGG-------AGAC-------------------------------CCG---ACT--CCGC--------------------------------------------------------------------ACTCCCAT---------------------------------------TTCC-CAGCCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCAC--------------------------------------CSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTAACC--ACACTGA----------------------CAAC-TTGCA...................................................................................2311.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTTATAACAACGTCCAGC.........................................................2111.00100100000000000000
...................................................................ACAGCAG------CAGCTGCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15110.09100000000001000000
droSec2
ATCCGCAGGCCCA---------------CG---------------------------CCCCC-----ACAGCAG------CAGCTGCC---GCTCCACCTCAGGTAAATTGC-C------A--------------GC-----CC-------------AAGT----GCTCAA-----------TTG-A-AACCAAT---GAA---TTGTATATA---------------------C-------------------------------------------------------------ATA-TA------------------GTCA--AGT-T--TC---------------GT--GTGC-----------G----------------------TCGAGTGTAAATAT--AATTGTAT-CCGCC--A-------CTGA------CACAATTTG--TATCTCA---------------------TCCCGGTGGGG--CATTAA-ACG----------------CCATGTA-------CATAGCA---T--T---TGG-------AGAC-------------------------------CCA---ACT--CCGC--------------------------------------------------------------------ACTCCCAT---------------------------------------TTCC-CAGCCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCAC--------------------------------------CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..CCGCAGGCCCA---------------CG---------------------------CCCCC-----A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
droYak3
ATCCCCAGGCCCAGG---CC------CACG---------------------------CCCCC--AGCACAGCAG------CGGCTGCC---GCGCCACCTCAGGTAAATGAT-G----CAATGCCCGCTTTTCCAGC-----CA--------------A---------------------------A-AACCAAT---GTACCAATGTATATAGAACACA----------------------------------------------------C-----------------A---CTATA-TA------------------GTCGATAGT-T--TC---------------GT--GTGC-----------G----------------------TCGAGTGTAAATAT--AAATGTATACTGCC--A-------CTGC------CACAAATTG--TTGCTCA---------------------TC-CGGTGGGG--CATTAAAACG----------------CCATGTA-------CATAGCA---T--T---TGG-------AGGT-------------------------------CCA---ACT--CCGCA---------------------CTTCGCACTC---------------------------------CACACTCCCAT---------------------------------------TCCC-CAGCCTAACC--ACACTGA----------------------CAAC-TTGCAGGGTCCCATTTATAACAACGTCCAGCCACGCACCACCCAGCCACCA------------------------CAAAATGCCTACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................CC--AGCACAGCAG------CGGCTGCC---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
................................................................AGCACAGCAG------CGGCTGCC---GCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
......AGGCCCAGG---CC------CACG---------------------------CCCCC--AGCACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.....CAGGCCCAGG---CC------CACG---------------------------CCCCC--AGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...........CAGG---CC------CACG---------------------------CCCCC--AGCACAGCAG------CG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
....CCAGGCCCAGG---CC------CACG---------------------------CCCCC--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
...........CAGG---CC------CACG---------------------------CCCCC--AGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEre2
ATCCGCAGGGCCA---------------CG---------------------------CCCCC-----ACAGCAG------CGGCTGCC---GCTCCACCTCAGGTAATT-GC-C------ATACC----------------CG---------------C-T----TTTCCA-----------GTT-A-AGCCAAT---GAT---TTGTATATAGAACACA--------------------------------------------------------------------------CTATA-TA------------------GTCG--AGT-T--TC---------------GT--GTAC-----------G----------------------TCGAGTGTAAATAT--AAATGTAT-CT-------------------------CAACTTG--TATCTCA---------------------TC-CGGTGGGG--CATTAAAACG----------------CCATGTA-------CATAGCA---T--C---TGG-------AGAC-------------------------------CCA---ACT--CCGT--------------------------------------------------------------------ACTCCCAT---------------------------------------TTCC-CAGCCTAACC--ACACTGA----------------------CAAC-TTGCAGGGCCCCATTTATAACAACGTCCAGCCACGCACCACCCAACCAC--------------------------------------CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................G------CGGCTGCC---GCTCCACCTCAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.......................................................................CAG------CGGCTGCC---GCTCCACCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
....................................................................CAGCAG------CGGCTGCC---GCTCCACCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
...CGCAGGGCCA---------------CG---------------------------CCCCC-----AC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
......................................................................GCAG------CGGCTGCC---GCTCCACCTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
......................................................................GCAG------CGGCTGCC---GCTCCACC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000

Generated: 05/18/2015 at 06:11 AM