ID:

dps_3118

 Coordinate:

XR_group6:9790418-9790568 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.8 -5.7 -5.7 -5.6

Flybase annnotation

CDS [Dpse\GA18934-cds]; exon [dpse_GLEANR_12229:1]; intron [Dpse\GA18934-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAACGGGAGCAACTTTGGCAACAGCAAAGTTGTGGGAGCAAATGGACACGGTGAGTAGCGTAGGAGACGACGAAGAGGGGGAAGAGAAGTTGCCCCAATCGCTTAGTAGTTGGTTTTCTCCGTATCCGTGTCTCTCTCTCTCTCTTATGTTTCTTTGTGTCGCAATTTGAAAAATTTTCCATGTGCGTCTCTTGGTTTTGGTAGACAGACACAAGCACACACAGAAATACATGCATGTGTACATATATTTT
**************************************************************************************************************...((....(((....(((.................((.((((.((((...))))...)))).)).........))).....)))....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M062
head
 V112
male body		 GSM343916
embryo
..............................................................................................................TGGTTTTCTCCGTATCCGTG......................................................................................................................... 20 0 1 2.00 2 2 0 0 0
......................................................................................................................................................................................GTGCGTCTCTTGGTTTTGG.................................................. 19 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................TTTTCCATGTGCGTCTCTTGG........................................................ 21 0 1 1.00 1 1 0 0 0
..............TTGGCAACAGCAAAGTTGTGG........................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0
...................................GAGCAAATGGACACGGTGAGT................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................TTTTGGTAGACAGACACAAGC................................... 21 0 1 1.00 1 1 0 0 0
.............................................................AGGAGACGACGAAGAGGGGG.......................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
...............................GTGGGAGCAAATGGACACGG........................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0
.........................................................................GGAGGGGGAAGGGAAGTTGCC............................................................................................................................................................. 21 2 1 1.00 1 0 1 0 0
................................TGGGAGCAAATGGACACGGTGT..................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................................................................................................................ATGTTTCTTTGTGTCGCAATT.................................................................................... 21 0 1 1.00 1 1 0 0 0
..............................................CACGGTGAGTAGCGTAGGAGA........................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................CATGTGCGTCTCTTGGTTTTG................................................... 21 0 1 1.00 1 1 0 0 0
...............................................................................................................GGTTTTCTCCGTATCCGTGTC....................................................................................................................... 21 0 1 1.00 1 1 0 0 0
................................................................AGACGACGAAGAGGGGGAAGA...................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.....................................................................................................CTTAGTAGTTGGTTTTCTCCG................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.................GCAACAGCAAAGTTGTGGGA...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0
.............TTTGGCAACAGCAAAGTTGTG......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................CTTGGTTTTGGTAGACAGACAC....................................... 22 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................TTTGTGTCGCAATTTGAAAA.............................................................................. 20 0 1 1.00 1 1 0 0 0
..ACGGGAGCAACTTTGGCAAC..................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0
.................................................GGTGAGTAGCGTGGGAGACGT..................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0
.........................................................................AGAGGGGTAAGATAAGTT................................................................................................................................................................ 18 2 2 0.50 1 0 0 0 1
............................................................................................................................................TGTCTTATGTTTCTCTGTG............................................................................................ 19 2 11 0.18 2 2 0 0 0

Anti-sense strand reads

GTTGCCCTCGTTGAAACCGTTGTCGTTTCAACACCCTCGTTTACCTGTGCCACTCATCGCATCCTCTGCTGCTTCTCCCCCTTCTCTTCAACGGGGTTAGCGAATCATCAACCAAAAGAGGCATAGGCACAGAGAGAGAGAGAGAATACAAAGAAACACAGCGTTAAACTTTTTAAAAGGTACACGCAGAGAACCAAAACCATCTGTCTGTGTTCGTGTGTGTCTTTATGTACGTACACATGTATATAAAA
**************************************************...((....(((....(((.................((.((((.((((...))))...)))).)).........))).....)))....))************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 V112
male body		 GSM444067
head
..................................................................................................................................................TACAAAGAAACACAGCGTTAA.................................................................................... 21 0 1 1.00 1 1 0 0 0
....................................................................................................................AGAGGCATAGGCACAGAGGGAG................................................................................................................. 22 1 1 1.00 1 1 0 0 0
............................................................................................................................................................................................................................TGTCTTTATGTACGTACACAT.......... 21 0 1 1.00 1 1 0 0 0
..................................................................TGCTGCTTCTCCCCCTTCTCTT................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................................................................CCATCTGTCTGTGTTCGTG................................. 19 0 1 1.00 1 1 0 0 0
.........GTTGGAACCGTTGTCGTTTCA............................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0
.......................CGTTTCAACACCCTCGTTT................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................AACCAAAACCATCTGTCTGT........................................ 20 0 1 1.00 1 0 1 0 0
.........................TTTCAACACCCTCGTTTACCT............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.....................................................................................CTTCAACGGGGTTAGCGGG................................................................................................................................................... 19 2 5 0.20 1 1 0 0 0
.................................................................CTGCTGCTTCTCCCGCTTCTCC.................................................................................................................................................................... 22 2 6 0.17 1 1 0 0 0
................................................................CCTGCTGCTTCTCCCGCTTCT...................................................................................................................................................................... 21 2 8 0.13 1 1 0 0 0
....................................................................................TCACCAACGGGGTTAGCAAA................................................................................................................................................... 20 3 12 0.08 1 0 0 1 0
.......................................................................................TCAACGGGGTAAGAGATTC................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0
........................................................................................................................................................................................................................TGTTTGAATTTATGTACGTAC.............. 21 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:9790368-9790618 - dps_3118 CAAC----------GGGAGCAACTTT------------GGC---AACAGCAAAGTTGTGGGAGCAAATGGACACGGTGAGTAGC----------G-TA----G-G---------A--GACGACGA--------------------------A-G--------------AGG-----------GG---GAAGAGAAGTTGCCCC-------AATCGCTTAGTAGTTGGTTTTCTCCGTATCCGTGTCTCTCTCT------------CTCTCTTATGT---TT-----CTTTGTGTCGCAA-T----------------------------TTGAAAAATT-TTCCATGTGCG-T----CTCTTGGT-------------TTTGGTAGACAGACA----C-----AAGCACA--CACA---------GAAATACATG----CA-----------------------TG---TGT---------------------------------------------A-----------------CA----TATAT-TTT
droPer2 scaffold_61:65937-66185 - CAAC----------GGGAGCAACTTT------------GGC---AACAGCAAAGTTGTGGGAGCAAATGGACACGGTGAGTAGC----------G-TA----G-G---------A--GACGACGA--------------------------A-G--------------AGG-----------GG---GAAGAGAAGTTGCCCC-------AATCGCTTAGTAGTTGGTTTTCTCCGTATCCGTGTCTCTCTCT------------C--TCTTATGT---TT-----CTTTGTGTCGCAA-T----------------------------TTGAAAAATT-TTCCATGTGCG-T----CTCTTGGT-------------TTTGGTAGACAGACA----C-----AAGCACA--CACA---------GAAATACATG----CA-----------------------TG---TGT---------------------------------------------A-----------------CA----TATAT-TTT
droWil2 scf2_1100000004511:3791822-3791889 + CAACAAATAATGGTAACAGC---------------AACAGCGCCGGCAGCAAAATTTTGGGCGCAAATGGTCACGGTGAGTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:8312855-8313065 + dvi_18961 CAAC----------TGCAAT---------------TACAAAACAAATGGCAAGGCTGTGGGCTCCAATGGACATGGTGAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------TTGTTATTTTCCCCCTCTTTTTTT------------T---------TTT--TT---TAATT--GTGGCCA-CA-----T---------------------TTGCCCAAGC-ATCTACTTTGTAC----GTAT---------G----------------T----ATGTG-TG-----------------------T----GTGTGTG----CG-----------------------TG---TGTGTATGTGTATTAAAATTACATAAAGATGTATGTGCTGCTGTTTATG-----------------TTT----GTGT-TTC
droMoj3 scaffold_6540:31971103-31971339 + CAGC----------AGCAGC---------------AGTAGC---AGCGACGTCAGCGTCAACGTCAACGGCAGCG---------------------TC----A-G---------C--GTCGACGT--------------------------C-G--------------ACG-----------TC---GTAGTCAAGTTA-----------------------GTCGATT-TTGTTGTTTACGTATTAGTAA--AGTTGTCTGCGC----------------TTGTTGTTAGTGTCGGTG-TTTG---TTTGTTGTTGACGTTGGTCGCGGTGCGAAATT-TT-TATTTATTTT----CTGCTGCTG----------------CTACCAACACA----C-----ACACACA--CACA---------TATATACGTA----CA-----------------------TG---T--------------------------------------------------------------------------GT-ATA
droGri2 scaffold_15110:7341352-7341529 + CAAC----------GGCAGC---------------AACAAAACAAATGGCAAATTTGGTGCCGGAAATGGACACGGTAAGTGC---------------------------------------------------------------------------------------------------------------------TTG--------------ATGGTTATCGTCATCGACCTATCGGTTTAT------------------CGCGCCTATTTCCTTT-----TTTGATTTGGCAT-------------------------------TACATAAAT-TTGTGTGCACT-------TCT---------G---------------------------------------------------------------------------------------------------------------------------------------------TTTACATTTGCGTGTTGTCAATGTATTT---TTT-TCT
droAna3 scaffold_13337:12777715-12778001 - dan_2603 TACC----------GCCAACACCTTTGGGAATAAAAACAAT---GCTGGCAAAATTGTGGGCGCAAATGGACATGGTAAGTAGCC-----------A----AG-AAGAAGAAGAA--CACGACGAACAAGAGAATTCAAAAAAAAAAAAAAGAG--------------AGGGGGAGGAGCACATGAAGAAGAGAAGCTGCTGCCTGCCTGCCTGCTTGCCTCGTTGCTTTTCTTCGTCTCTGTCTTGGCCTGT------------G---------TTT--------CTTTGTGTCGCAA-T----------------------------TTGCGAAATT-TTCCATGCGCCCCCCAAGTCC---------CTGTCTTTTT-------TAATTC-----------------------CAAGCTGGC--------------------------------------------T--------------------------------------------------------------------------G--TTT
droBip1 scf7180000396589:1245289-1245585 + CAAC----------GCCACC---TTCCCGAATAAAAACAAC---GCTGGCAAAATTGTGGGCGCAAATGGACATGGTAAGTAGCGATGT-----GT-TGGAAG-AAGAAGAAGA--------------AGAGAATACAAAAAAAAAAA------GAGAGGAGAGTGGGAGGGGGAGGAGCACATGAAGAAGAGAAGCTGCCTC-----------------GCGTTGCTTTTCTTCGTCTCTGTCTTTGCCTGT------------G---------TTT--------CTTTGTGTCGCAA-T----------------------------TTGCGAAATT-TTCCATGCGCCCT----GTTCCCCGACATGA----------------T----GCCCG-TGGA-----------------CAT------CTAT--------ATGCT---CCTCCAAGAGCT------ACCT-----------------------------------------------G-----------------GT----TATAT-TTC
droKik1 scf7180000302686:60899-61127 + CAA-------------CAAA---------------AACAAT---GCTGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTATTC-----------A----AG-AAGAAGAGAA--------------GGAGAAGA-------GACAGAAAA-GGA-------------GAAGAAGTAGGAACTGCA-GAGAGAGGTTGCTGT-------A-----GCAAAAGTTAATTTTCTTCGCCTCCGTCTTGTTGTGT------------G---------TTTCTT-----CTTTGTGTCGCAA-TGCTGTAT---------------------TCGCAAAATT-TTACATGTGCCTT----ATGCTGATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGT---TAT-TTT
droFic1 scf7180000453929:1853389-1853588 - C----------------AAA---------------AACAAC---GCAGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--------G---------------------A--TAAAA----------------------------------------------------------AAAA---AACGAAAAGTTGCCTG--------------CAAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-T----------------------------TTGCGCAATTTTTCCATGTGCTAT----AAAT---------G----------------TATATA-----------------------TAATATAT----ATATGTA----CA-----------------------TG---T-----------------------------------------------G-----------------TA----TATAT-TAT
droEle1 scf7180000491268:1255219-1255439 + TGGT----------GGTAAA---------------AACAAC---ACAGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--------G---------------------C--TAAAAAA--------------------------------------------------------AAAA---AATCAAAAGTTGCCTG--------------CAAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-T----------------------------TTGCGCAATC-TTCCATGTGCTATACATATCT---------A------------------TGTATGT------------------------ATGT----ATATATA----TATGTGT-ATAT-------AT------ATAT-----------------------------------------------A-----------------GATAT----ATCCTC
droRho1 scf7180000768851:41449-41649 + TGGT----------GGCAAA---------------AACAAC---ACAGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--------G---CA----A-----------------AA----------------------------------------------------------AAAA---AACCAAGAGTTGC-TG--------------CAGAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTGT------------G---------TTTC-T-----CTTTGTATGGCAA-T----------------------------TTGCGCAATC-TTCCATGTGCTATACATATTT---------ATG--------------T----AT-------------------------------------------------------ATGTGAGGTAT------ATAT-----------------------------------------------G-----------------TATAT----ATCCTC
droBia1 scf7180000302193:3265700-3265933 + TGG-------------CAAA---------------AGCAAC---ACGGGCAAAGTTGTGGGCGCAAACGGACATGGTGAGTAGA--------G---CA----G-G--------------CGAGA---------------------------A-AC-------------------------GCAC---ACCGAAGAGTTGCCTG---C---AAGC--GCAAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAG-T------T---------------------TTGCGCAATT-TTCCATGTGCCAC----ATCC---------ATCTC------------TATGTA-----------------------CACGCTGTGCC------CC----TGTGCC-GCTGT-------ACATAC--ACAC-----------------------------------------------A-----------------TATGT----ATCCTG
droTak1 scf7180000415868:467119-467341 + TGGT----------GGCAAA---------------AACCAC---ACGGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--TGAGTGGGGT-A----AAA---------A--TAAAACGA--------------------------------------------T----------A-AA---ACCGAAAAGTTGCCTG--------------CAAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-T------T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCT---------A----------------T----ACATA-TGTA-----------------TAT------GTAT--------ATGCG---------------------ATAT-----------------------------------------------G-----------------TATTT----ATCCTC
droEug1 scf7180000409466:3532827-3533040 + TGGT----------GGAAAA---------------AACAAC---ACAGGCAAAGTTGTGGGCGCAAATGGGCATGGTGAGTAAA--------G---C-----------------A--TAAAA----------------------------------------------------------AAGA---AACGAAAAGTTGCCTG--------------TAAAAGTGGCTTTTCTTCGTCTCCACCTTCGTCTGT------------G---------TTT-TT-----CTTTGTGTGGCAA-T----------------------------TTGCGCAATT-TTCCATGTGCTAT----ATCT---------A----------------TATATA-----------------------TGAGATGTAT-----TAT------------ATTAT-------ATATAA--ACAT-----------------------------------------------A-----------------TATGT---AGT-TTT
dm3 chr3L:5762987-5763222 + TAGT----------GGCAAA---------------AACAAT---ACAGGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACA-CTGT-----GT-A----AAG---------A--TACAACAA--------------------------A-ATG-------------T----------A-AA---ATCCAAAAGTTGCTTG--------------CAAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-TT-----T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCTTCATAT--TA----------------TATATA-----------------------TAAGATGTAT----ATATACTTAAA-----------------------TG---TAT---------------------------------------------T-----------------TATGT----ATCGTC
droSim2 3l:5676020-5676239 + dsi_9043 TAGT----------GGCAAA---------------AACAAT---ACAGGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACA-CTGA-----GT-A----AAG---------ATATACAACAA--------------------------A--TA-------------T----------A-AA---ATCCAAAAGTTGCTTG--------------CAAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-TT-----T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCTTCATAT---A----------------TATA--------------------------------T----ATAT--A----TA-----------------------T----------------------------------------------------A-----------------TATGTATATGT-TTC
droSec2 scaffold_2:5699853-5700090 + TAGT----------GGCAAA---------------AACAAT---ACAGGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACA-CTGA-----GT-A----AAG---------A--TACAACAA--------------------------A--TT-------------T----------A-AA---ATCCAAAAGTTGCTTT--------------CAAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAC-TT-----T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCTTCGTAT---A----------------TATATA-----TA----------------T-ATATATAT----AT---------------ATAT-------ATATA-TA---TAT---------------------------------------------A-----------------TATGTATATGT-TTC
droYak3 3L:6332468-6332703 + TGGT----------GGCAAA---------------AACAAT---ACAGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--------GCGT-A----AAG---------A--TACAGCAA--------------------------A-ATA-------------T----------AAAA---ATCCAAAAGTTGCCTG--------------CAAAAGTGGCTTTTTTCCGTCTGCGTCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAACTT-----T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCTTCATAT---A----------------TATATA-----------------------TAAGATGTATATATATATA----CA-----------------------TT---TAT---------------------------------------------A-----------------TATGT----ATTATC
droEre2 scaffold_4784:8453580-8453825 + TGGT----------GGCAAA---------------AACAAT---ACAGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--------GAGT-A----AAG---------C--TACAACAA--------------------------A-GTA-------------T----------AAAA---ATCCAAAAGTTGCCTG--------------CAAAAGTGGCTTTTTTCCGTCTGCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-TTTT---T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCTTCTTAT---A----------------T----ACATG-TGTATATGTACATA----TAAGACGT----ATATATA----CA-----------------------TT---TAT---------------------------------------------A-----------------TATGT----AT-CAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CAAC----------GGGAGCAACTTT------------GGC---AACAGCAAAGTTGTGGGAGCAAATGGACACGGTGAGTAGC----------G-TA----G-G---------A--GACGACGA--------------------------A-G--------------AGG-----------GG---GAAGAGAAGTTGCCCC-------AATCGCTTAGTAGTTGGTTTTCTCCGTATCCGTGTCTCTCTCT------------CTCTCTTATGT---TT-----CTTTGTGTCGCAA-T----------------------------TTGAAAAATT-TTCCATGTGCG-T----CTCTTGGT-------------TTTGGTAGACAGACA----C-----AAGCACA--CACA---------GAAATACATG----CA-----------------------TG---TGT---------------------------------------------A-----------------CA----TATAT-TTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................TGGTTTTCTCCGTATCCGTG..................................................................................................................................................................................................................................................................................................................2012.0020200000000
..........................................................................................................................................................................................................................................................................................................................................................GTGCG-T----CTCTTGGT-------------TTTGG.......................................................................................................................................................................1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................TT-TTCCATGTGCG-T----CTCTTGG..........................................................................................................................................................................................2111.0010100000000
........................TT------------GGC---AACAGCAAAGTTGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................GAGCAAATGGACACGGTGAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................T-------------TTTGGTAGACAGACA----C-----AAGC...............................................................................................................................................2111.0010100000000
.................................................................................................A----G-G---------A--GACGACGA--------------------------A-G--------------AGG-----------GG---G..........................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................GTGGGAGCAAATGGACACGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................TGGGAGCAAATGGACACGGTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................ATGT---TT-----CTTTGTGTCGCAA-T----------------------------T............................................................................................................................................................................................................................2111.0010100000000
.......................................................................CACGGTGAGTAGC----------G-TA----G-G---------A--GA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................CATGTGCG-T----CTCTTGGT-------------TTTG........................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................GGTTTTCTCCGTATCCGTGTC................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................A--GACGACGA--------------------------A-G--------------AGG-----------GG---GAAGA......................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................CTTAGTAGTTGGTTTTCTCCG..........................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................GC---AACAGCAAAGTTGTGGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
.......................TTT------------GGC---AACAGCAAAGTTGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................CTTGGT-------------TTTGGTAGACAGACA----C-----...................................................................................................................................................2211.0010100000000
...............................................................................................................................................................................................................................................................................................TTTGTGTCGCAA-T----------------------------TTGAAAA......................................................................................................................................................................................................................2011.0010100000000
..AC----------GGGAGCAACTTT------------GGC---AAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000000
droPer2
CAAC----------GGGAGCAACTTT------------GGC---AACAGCAAAGTTGTGGGAGCAAATGGACACGGTGAGTAGC----------G-TA----G-G---------A--GACGACGA--------------------------A-G--------------AGG-----------GG---GAAGAGAAGTTGCCCC-------AATCGCTTAGTAGTTGGTTTTCTCCGTATCCGTGTCTCTCTCT------------C--TCTTATGT---TT-----CTTTGTGTCGCAA-T----------------------------TTGAAAAATT-TTCCATGTGCG-T----CTCTTGGT-------------TTTGGTAGACAGACA----C-----AAGCACA--CACA---------GAAATACATG----CA-----------------------TG---TGT---------------------------------------------A-----------------CA----TATAT-TTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................ACAGCAAAGTTGTGGGAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
CAACAAATAATGGTAACAGC---------------AACAGCGCCGGCAGCAAAATTTTGGGCGCAAATGGTCACGGTGAGTAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......TAATGGTAACAGC---------------AACAGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
...............................................AGCAAAATTTTGGGCGCAAATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..............AACAGC---------------AACAGCGCCGGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...........................................CGGCAGCAAAATTTTGGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
..............AACAGC---------------AACAGCGCCGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.00201010
......ATAATGGTAACAGC---------------AACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
.................AGC---------------AACAGCGCCGGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
droVir3
CAAC----------TGCAAT---------------TACAAAACAAATGGCAAGGCTGTGGGCTCCAATGGACATGGTGAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------TTGTTATTTTCCCCCTCTTTTTTT------------T---------TTT--TT---TAATT--GTGGCCA-CA-----T---------------------TTGCCCAAGC-ATCTACTTTGTAC----GTAT---------G----------------T----ATGTG-TG-----------------------T----GTGTGTG----CG-----------------------TG---TGTGTATGTGTATTAAAATTACATAAAGATGTATGTGCTGCTGTTTATG-----------------TTT----GTGT-TTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
CAAC----------TGCAAT---------------TACAAAACAAATGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
..............................................................TCCAATGGACATGGTGAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................................................CCAATGGACATGGTGAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000100000000000000000000000000000
...........................................AAATGGCAAGGCTGTGGGCTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
.................................................................AATGGACATGGTGAGTGTG-------------------------------------------------------------------------------------------------------------------------------------------------TT...............................................................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AT---------G----------------T----ATGTG-TG-----------------------T----GTGTGTG----...............................................................................................................19200.051000000001000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TG-----------------------T----GTGTGTG----CG-----------------------TG---TGTGTA...........................................................................20200.051000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................ATGTG-TG-----------------------T----GTGTGTG----CG-----------------------TG---TGT..............................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................................................................................ATGTG-TG-----------------------T----GTGTGTG----CG-----------------------TG---TG...............................................................................21200.051000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG----CG-----------------------TG---TGTGTATGTG.......................................................................18200.051000000000000000000000000100000000000000000000000000000000000000
droMoj3
CAGC----------AGCAGC---------------AGTAGC---AGCGACGTCAGCGTCAACGTCAACGGCAGCG---------------------TC----A-G---------C--GTCGACGT--------------------------C-G--------------ACG-----------TC---GTAGTCAAGTTA-----------------------GTCGATT-TTGTTGTTTACGTATTAGTAA--AGTTGTCTGCGC----------------TTGTTGTTAGTGTCGGTG-TTTG---TTTGTTGTTGACGTTGGTCGCGGTGCGAAATT-TT-TATTTATTTT----CTGCTGCTG----------------CTACCAACACA----C-----ACACACA--CACA---------TATATACGTA----CA-----------------------TG---T--------------------------------------------------------------------------GT-ATASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CAAC----------GGCAGC---------------AACAAAACAAATGGCAAATTTGGTGCCGGAAATGGACACGGTAAGTGC---------------------------------------------------------------------------------------------------------------------TTG--------------ATGGTTATCGTCATCGACCTATCGGTTTAT------------------CGCGCCTATTTCCTTT-----TTTGATTTGGCAT-------------------------------TACATAAAT-TTGTGTGCACT-------TCT---------G---------------------------------------------------------------------------------------------------------------------------------------------TTTACATTTGCGTGTTGTCAATGTATTT---TTT-TCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................AAATTTGGTGCCGGAAATGGACACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
droAna3
TACC----------GCCAACACCTTTGGGAATAAAAACAAT---GCTGGCAAAATTGTGGGCGCAAATGGACATGGTAAGTAGCC-----------A----AG-AAGAAGAAGAA--CACGACGAACAAGAGAATTCAAAAAAAAAAAAAAGAG--------------AGGGGGAGGAGCACATGAAGAAGAGAAGCTGCTGCCTGCCTGCCTGCTTGCCTCGTTGCTTTTCTTCGTCTCTGTCTTGGCCTGT------------G---------TTT--------CTTTGTGTCGCAA-T----------------------------TTGCGAAATT-TTCCATGCGCCCCCCAAGTCC---------CTGTCTTTTT-------TAATTC-----------------------CAAGCTGGC--------------------------------------------T--------------------------------------------------------------------------G--TTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................T---GCTGGCAAAATTGTGGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................................................AAGAAGAGAAGCTGCTGCCTG........................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................AATAAAAACAAT---GCTGGCAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................................................AAAAAAAAGAG--------------AGGGGGAGGAGC..................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.................................................................................................................................................AAAAAAGAG--------------AGGGGGAGGAGC..................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....................................................ATTGTGGGCGCAAATGGACAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.......................................................................................................................................................................................................................................CTTCGTCTCTGTCTTGGCCTG..........................................................................................................................................................................................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................TGTCTTGGCCTGT------------G---------TTT--------CTTTG...................................................................................................................................................................................................................................................................2211.001100000
..................................AAACAAT---GCTGGCAAAATTGTGGGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
................CAACACCTTTGGGAATAAAAACAAT---GC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.........................................................................................................................................AAAAAAAAAAAAAAGAG--------------A.............................................................................................................................................................................................................................................................................................................................................................................................18200.051000100
droBip1
CAAC----------GCCACC---TTCCCGAATAAAAACAAC---GCTGGCAAAATTGTGGGCGCAAATGGACATGGTAAGTAGCGATGT-----GT-TGGAAG-AAGAAGAAGA--------------AGAGAATACAAAAAAAAAAA------GAGAGGAGAGTGGGAGGGGGAGGAGCACATGAAGAAGAGAAGCTGCCTC-----------------GCGTTGCTTTTCTTCGTCTCTGTCTTTGCCTGT------------G---------TTT--------CTTTGTGTCGCAA-T----------------------------TTGCGAAATT-TTCCATGCGCCCT----GTTCCCCGACATGA----------------T----GCCCG-TGGA-----------------CAT------CTAT--------ATGCT---CCTCCAAGAGCT------ACCT-----------------------------------------------G-----------------GT----TATAT-TTCSizeHit CountTotal NormTotal
No Reads
droKik1
CAA-------------CAAA---------------AACAAT---GCTGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTATTC-----------A----AG-AAGAAGAGAA--------------GGAGAAGA-------GACAGAAAA-GGA-------------GAAGAAGTAGGAACTGCA-GAGAGAGGTTGCTGT-------A-----GCAAAAGTTAATTTTCTTCGCCTCCGTCTTGTTGTGT------------G---------TTTCTT-----CTTTGTGTCGCAA-TGCTGTAT---------------------TCGCAAAATT-TTACATGTGCCTT----ATGCTGATG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTGT---TAT-TTTSizeHit CountTotal NormTotal
No Reads
droFic1
C----------------AAA---------------AACAAC---GCAGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--------G---------------------A--TAAAA----------------------------------------------------------AAAA---AACGAAAAGTTGCCTG--------------CAAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-T----------------------------TTGCGCAATTTTTCCATGTGCTAT----AAAT---------G----------------TATATA-----------------------TAATATAT----ATATGTA----CA-----------------------TG---T-----------------------------------------------G-----------------TA----TATAT-TATSizeHit CountTotal NormTotal
No Reads
droEle1
TGGT----------GGTAAA---------------AACAAC---ACAGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--------G---------------------C--TAAAAAA--------------------------------------------------------AAAA---AATCAAAAGTTGCCTG--------------CAAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-T----------------------------TTGCGCAATC-TTCCATGTGCTATACATATCT---------A------------------TGTATGT------------------------ATGT----ATATATA----TATGTGT-ATAT-------AT------ATAT-----------------------------------------------A-----------------GATAT----ATCCTCSizeHit CountTotal NormTotal
No Reads
droRho1
TGGT----------GGCAAA---------------AACAAC---ACAGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--------G---CA----A-----------------AA----------------------------------------------------------AAAA---AACCAAGAGTTGC-TG--------------CAGAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTGT------------G---------TTTC-T-----CTTTGTATGGCAA-T----------------------------TTGCGCAATC-TTCCATGTGCTATACATATTT---------ATG--------------T----AT-------------------------------------------------------ATGTGAGGTAT------ATAT-----------------------------------------------G-----------------TATAT----ATCCTCSizeHit CountTotal NormTotal
No Reads
droBia1
TGG-------------CAAA---------------AGCAAC---ACGGGCAAAGTTGTGGGCGCAAACGGACATGGTGAGTAGA--------G---CA----G-G--------------CGAGA---------------------------A-AC-------------------------GCAC---ACCGAAGAGTTGCCTG---C---AAGC--GCAAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAG-T------T---------------------TTGCGCAATT-TTCCATGTGCCAC----ATCC---------ATCTC------------TATGTA-----------------------CACGCTGTGCC------CC----TGTGCC-GCTGT-------ACATAC--ACAC-----------------------------------------------A-----------------TATGT----ATCCTGSizeHit CountTotal NormTotal
No Reads
droTak1
TGGT----------GGCAAA---------------AACCAC---ACGGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--TGAGTGGGGT-A----AAA---------A--TAAAACGA--------------------------------------------T----------A-AA---ACCGAAAAGTTGCCTG--------------CAAAAGTGGCTTTTCTTCGTCTCCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-T------T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCT---------A----------------T----ACATA-TGTA-----------------TAT------GTAT--------ATGCG---------------------ATAT-----------------------------------------------G-----------------TATTT----ATCCTCSizeHit CountTotal NormTotal
No Reads
droEug1
TGGT----------GGAAAA---------------AACAAC---ACAGGCAAAGTTGTGGGCGCAAATGGGCATGGTGAGTAAA--------G---C-----------------A--TAAAA----------------------------------------------------------AAGA---AACGAAAAGTTGCCTG--------------TAAAAGTGGCTTTTCTTCGTCTCCACCTTCGTCTGT------------G---------TTT-TT-----CTTTGTGTGGCAA-T----------------------------TTGCGCAATT-TTCCATGTGCTAT----ATCT---------A----------------TATATA-----------------------TGAGATGTAT-----TAT------------ATTAT-------ATATAA--ACAT-----------------------------------------------A-----------------TATGT---AGT-TTTSizeHit CountTotal NormTotal
No Reads
dm3
TAGT----------GGCAAA---------------AACAAT---ACAGGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACA-CTGT-----GT-A----AAG---------A--TACAACAA--------------------------A-ATG-------------T----------A-AA---ATCCAAAAGTTGCTTG--------------CAAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-TT-----T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCTTCATAT--TA----------------TATATA-----------------------TAAGATGTAT----ATATACTTAAA-----------------------TG---TAT---------------------------------------------T-----------------TATGT----ATCGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................TGT------------G---------TTTCTT-----CTTTGTGTGGC.............................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000010
.........................................................TGGGCGCAAATGGACATGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000
......................................................TTGTGGGCGCAAATGGACATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000010
...........................................................GGCGCAAATGGACATGGTGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ACTTGTGGGCGCAAATGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000010000
...............................................GGCAAACTTGTGGGCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................TT-----T---------------------TTGCGCAATT-TTCCATGT..........................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................CTGT------------G---------TTTCTT-----CTTTGTGTGG..............................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................AGGCAAACTTGTGGGCGCAAATGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................ACAGGCAAACTTGTGGGCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
...............................................GGCAAACTTGTGGGCGCAAATGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AGGCAAACTTGTGGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............GGCAAA---------------AACAAT---ACAGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CCGTCTGCGCCTTCGTCTGT------------G---------...................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................................................GT------------G---------TTTCTT-----CTTTGTGTGGCA............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................................................................................T-TTTCCGTCTGCGCCTTCG..............................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTGGGCGCAAATGGACATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
.......................................AT---ACAGGCAAACTTGTGGGCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GCAAACTTGTGGGCGCAAATGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................CCTTCGTCTGT------------G---------TTTCTT-----CTT.....................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CAAATGGACATGGTGAGTACA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CGTCTGCGCCTTCGTCTGT------------G---------T..................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000
.......................................................TGTGGGCGCAAATGGACATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000
.......................................AT---ACAGGCAAACTTGTGGGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................CCGTCTGCGCCTTCGTCTGT------------G---------G..................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ATGGACATGGTGAGTACA-CTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................AAACTTGTGGGCGCAAATGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................AAAAGTTGCTTG--------------CAAAAGTGG....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................CAAACTTGTGGGCGCAAATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................TTTCTT-----CTTTGTGTGGCAA-TT-----T---------------------.............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................T---ACAGGCAAACTTGTGGGCGCAAATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................TCCGTCTGCGCCTTCGTCT...........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................TCTGT------------G---------TTTCTT-----CTTTGTGTG...............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................................................AAACTTGTGGGCGCAAATGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...T----------GGCAAA---------------AACAAT---ACAGGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ACTTGTGGGCGCAAATGGACATGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CAGGCAAACTTGTGGGCGCAAATGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................T-----CTTTGTGTGGCAA-TT-----T---------------------TTGC.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...........................................................................GTGAGTACA-CTGT-----GT-A----AAG---------A--T................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................T---ACAGGCAAACTTGTGGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................AGGCAAACTTGTGGGCGCAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TTGCTTG--------------CAAAAGTGGCTT-TT..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGCTAT----ATCTTCATAT--TA----------------TAT................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................ATGGTGAGTACA-CTGT-----GT-A----AA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................................................................................................................................................GTCTGCGCCTTCGTCTGT------------G---------TT.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AGGCAAACTTGTGGGCGCAAATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................AACTTGTGGGCGCAAATGGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................ACATGGTGAGTACA-CTGT-----GT-A----................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................ACAGGCAAACTTGTGGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................ACTTGTGGGCGCAAATGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................AAGTGGCTT-TTTCCGTCTGCG....................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.............................................................CGCAAATGGACATGGTGAGTACA-CTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CTTCGTCTGT------------G---------TTTCTT-----CTTT....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................TGGGCGCAAATGGACATGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................................CTTGTGGGCGCAAATGGACAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................AAAGTTGCTTG--------------CAAAAGTGGC...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................ATCCAAAAGTTGCTTG--------------CAAAA........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GT------------G---------TTTCTT-----CTTTGTGTGGC.............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................AAACTTGTGGGCGCAAATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TTTGTGTGGCAA-TT-----T---------------------TTGCG........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................GGACATGGTGAGTACA-CTGT-----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..............................................................................................................................................................................................................................GTGGCTT-TTTCCGTCTGCGCC..................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................TTTCTT-----CTTTGTGTGGCAA-TT-----...................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................GCAAATGGACATGGTGAGTAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................GTGGGCGCAAATGGACATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
....................................................ACTTGTGGGCGCAAATGGACATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
......................................AAT---ACAGGCAAACTTGTGGGCGCAAATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTGGGCGCAAATGGACATGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------TG---TAT---------------------------------------------T-----------------TATGT----ATCGTC1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................G--------------CAAAAGTGGCTT-TTTCCGTC........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................CCTTCGTCTGT------------G---------TTTCTT-----CTTT....................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TTGTGTGGCAA-TT-----T---------------------TTGCGCA......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAT---ACAGGCAAACTTGTGGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TAGT----------GGCAAA---------------AACAAT---ACAGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................TGAGTACA-CTGT-----GT-A----AAG---------A--T................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GTGGGCGCAAATGGACATGGTGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................AGGCAAACTTGTGGGCGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TAGT----------GGCAAA---------------AACAAT---ACAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
droSim2
TAGT----------GGCAAA---------------AACAAT---ACAGGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACA-CTGA-----GT-A----AAG---------ATATACAACAA--------------------------A--TA-------------T----------A-AA---ATCCAAAAGTTGCTTG--------------CAAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-TT-----T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCTTCATAT---A----------------TATA--------------------------------T----ATAT--A----TA-----------------------T----------------------------------------------------A-----------------TATGTATATGT-TTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................CCGTCTGCGCCTTCGTCTGT------------G---------...................................................................................................................................................................................................................................................................................2111.00100000001000000000
..............................................................................................................................................................................................................................GTGGCTT-TTTCCGTCTGCGCC..................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...........................................................................................................................................................A-------------T----------A-AA---ATCCAAAAGTTGCTTG--------------.............................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.........................................................................................................................................................................................................TG--------------CAAAAGTGGCTT-TTTCCGTT........................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
......................................................................ACATGGTGAGTACA-CTGA-----GT-A----................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
....................................................................................................................................................................................................TTGCTTG--------------CAAAAGTGGCA..................................................................................................................................................................................................................................................................................................................................1811.00100000000010000000
..................................................................ATGGACATGGTGAGTACA-CTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.......................................................................................................................................................................................................................................TTCCGTCTGCGCCTTCGTCTG..........................................................................................................................................................................................................................................................................................................2111.00110000000000000000
................................................GCAAACTTGTGGGCGCAAATGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
.......................................................................................................................................................................................................................................................GTCTGT------------G---------TTTCTT-----CTTTGTG.................................................................................................................................................................................................................................................................2011.00100000000001000000
............................................ACAGGCAAACTTGTGGGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
..................................................AAACTTGTGGGCGCAAATGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
......................................................................................................................................................................................................................................................CGTCTGT------------G---------TTTCTT-----CTTTGTG.................................................................................................................................................................................................................................................................2111.00100000010000000000
............................................ACAGGCAAACTTGTGGGCGCAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
droSec2
TAGT----------GGCAAA---------------AACAAT---ACAGGCAAACTTGTGGGCGCAAATGGACATGGTGAGTACA-CTGA-----GT-A----AAG---------A--TACAACAA--------------------------A--TT-------------T----------A-AA---ATCCAAAAGTTGCTTT--------------CAAAAGTGGCTT-TTTCCGTCTGCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAC-TT-----T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCTTCGTAT---A----------------TATATA-----TA----------------T-ATATATAT----AT---------------ATAT-------ATATA-TA---TAT---------------------------------------------A-----------------TATGTATATGT-TTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................TTT--------------CAAAAGTGGCTT-TTTCCG..........................................................................................................................................................................................................................................................................................................................2111.0011000
.....................................................CTTGTGGGCGCAAATGGACAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
........................................................................................................................................................................................................................................................................................T-----CTTTGTGTGGCAC-TT-----T---------------------TTGC.........................................................................................................................................................................................................................2111.0010001
droYak3
TGGT----------GGCAAA---------------AACAAT---ACAGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--------GCGT-A----AAG---------A--TACAGCAA--------------------------A-ATA-------------T----------AAAA---ATCCAAAAGTTGCCTG--------------CAAAAGTGGCTTTTTTCCGTCTGCGTCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAACTT-----T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCTTCATAT---A----------------TATATA-----------------------TAAGATGTATATATATATA----CA-----------------------TT---TAT---------------------------------------------A-----------------TATGT----ATTATCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................CAAAGTTGTGGGCGCAAATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................GGCTTTTTTCCGTCTGCGTCT.................................................................................................................................................................................................................................................................................................................2111.00101000000000
TGGT----------GGCAAA---------------AACAAT---ACAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
droEre2
TGGT----------GGCAAA---------------AACAAT---ACAGGCAAAGTTGTGGGCGCAAATGGACATGGTGAGTAAA--------GAGT-A----AAG---------C--TACAACAA--------------------------A-GTA-------------T----------AAAA---ATCCAAAAGTTGCCTG--------------CAAAAGTGGCTTTTTTCCGTCTGCGCCTTCGTCTGT------------G---------TTTCTT-----CTTTGTGTGGCAA-TTTT---T---------------------TTGCGCAATT-TTCCATGTGCTAT----ATCTTCTTAT---A----------------T----ACATG-TGTATATGTACATA----TAAGACGT----ATATATA----CA-----------------------TT---TAT---------------------------------------------A-----------------TATGT----AT-CATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................TGGCTTTTTTCCGTCTGCGC...................................................................................................................................................................................................................................................................................................................2011.0011000000
..................................................................ATGGACATGGTGAGTAAA--------GAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
...................................................................................................................................................................................................................................................CTTCGTCTGT------------G---------TTTCTT-----CTTTGTGT................................................................................................................................................................................................................................................................2511.0010000010
..................................................AAAGTTGTGGGCGCAAATGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.......................................AT---ACAGGCAAAGTTGTGGGCGCAAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
........................................................GTGGGCGCAAATGGACATGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100

Generated: 05/18/2015 at 06:08 AM