ID:

dps_3114

 Coordinate:

XR_group6:9778013-9778309 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.4 -15.0 -14.9 -14.6

Flybase annnotation

CDS [Dpse\GA17196-cds]; exon [dpse_GLEANR_12230:1]; CDS [Dpse\GA17196-cds]; exon [dpse_GLEANR_12230:2]; intron [Dpse\GA17196-in]

No Repeatable elements found

Sense Strand Reads

---------------------------#######################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATTAACAAATGCAACATTAATAACAAAATGGTTAGCAGAAGCGTAGAAAGGTGAGTTTTCCCCCAATTTAGAACGAGGCGTGAGCGGCATAGATTACGCAAGACGCACGTACGGCCAGCGAGTGCAGCGGAGTTCTGGAATTCCCAGGGCACCTGGTCTGGTTATGCAATTTGTTTCGCGGCTTTCTTTATTTATTTGCATCAGACCATGGCTTCTGTGAAGGCAGCTGCAGTCGGGAACTATCGCGCCTACGTCGCGACCTTAACCTTGGTAGCGACTGCGGCTCCGTCTGCAGATAACTGTGATTGATGCATGCCCCATTACGCTTGAATTCTTTCTTTATGCAGTACGAGTAAAGTGCCGACATTCCATGTCATAAGGGAGGTATACGACAGCT
*******************************************************************************************************************************************************************************************************************************************************************...........((((((...(((((((.(((.((((....))))))).)).)).))).......))))..............))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 V112
male body		 GSM444067
head
 SRR902011
testis
...................................................................................................................................................................................................................................................................CCTTAACCTTGGTAGCGACT...................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.....................AACAAAATGGTTAGCAGAAGCGTAGAAA............................................................................................................................................................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 1 0 0
..................................................................................................................................................................................................................................................................................................................................................................................ATGTCATAAGGGAGGTATACGACAGCT 27 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................ACGCTTGAATTCTTTCTTTAT...................................................... 21 0 1 1.00 1 1 0 0 0 0
......................................................GTTTTCCCCCAATTTAGAACGAG................................................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................................................GCGCCTACGTCGCGACCTTAACC.................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
.....................................................AGTTTTCCCCCAATTTAGAACGAG................................................................................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0
.......................................................................AACGAGGCGTGAGCGGCA.................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
......................................................................GAACGAGGCGTGAGCGGCAT................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.........................................................................CGAGGCGTGAGCGGCATAGAT............................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...........................ATGGTTAGCAGAAGCGTAGAAAGG.......................................................................................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................GACCATGGCTTCTGTGAAGGCA............................................................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0
..................................................................................................................................................................................................TTTGCATCAGACCATGGCTTCTG.................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................CAGCTGCAGTCGGGAACTATCG........................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0
.................TAATAACAGAATAGTTAGCA........................................................................................................................................................................................................................................................................................................................................................................ 20 2 2 0.50 1 0 1 0 0 0
.................................................................................................................................GGGTTGTGGAATTCCCAGTG........................................................................................................................................................................................................................................................ 20 3 6 0.33 2 2 0 0 0 0
.........................................................................................................................................................................ATTGTTGCGCGGCTTTTTTT................................................................................................................................................................................................................ 20 3 20 0.10 2 0 0 0 0 2
.......................................................................AACGAGGCGTGAAGGGCTT................................................................................................................................................................................................................................................................................................................... 19 3 15 0.07 1 1 0 0 0 0
................................................................................................................................AGGGTTGTGGAATTCCCAG.......................................................................................................................................................................................................................................................... 19 3 19 0.05 1 1 0 0 0 0
..........................................................................................................................................................................................................................GAATGAAGTTGCAGTCGGG................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0
.......................................................................AACGAGGCGTAAGCGGAATG.................................................................................................................................................................................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TAATTGTTTACGTTGTAATTATTGTTTTACCAATCGTCTTCGCATCTTTCCACTCAAAAGGGGGTTAAATCTTGCTCCGCACTCGCCGTATCTAATGCGTTCTGCGTGCATGCCGGTCGCTCACGTCGCCTCAAGACCTTAAGGGTCCCGTGGACCAGACCAATACGTTAAACAAAGCGCCGAAAGAAATAAATAAACGTAGTCTGGTACCGAAGACACTTCCGTCGACGTCAGCCCTTGATAGCGCGGATGCAGCGCTGGAATTGGAACCATCGCTGACGCCGAGGCAGACGTCTATTGACACTAACTACGTACGGGGTAATGCGAACTTAAGAAAGAAATACGTCATGCTCATTTCACGGCTGTAAGGTACAGTATTCCCTCCATATGCTGTCGA
******************************************************...........((((((...(((((((.(((.((((....))))))).)).)).))).......))))..............))******************************************************************************************************************************************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V112
male body		 M040
female body
 GSM444067
head
 M059
embryo
 M022
male body		 GSM343916
embryo
..................................................CACTCAAAAGGGGGTTGAATC...................................................................................................................................................................................................................................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.....................................................................................................................................................................................GAAAGAAATAAAGAAAGGTAGTC................................................................................................................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................................TTCACGGCTGTAAGGTACAGT..................... 21 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................CGGTCGCTCACGTCGCCTC......................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................ACGGTGTAATCCGAACTTAAG............................................................... 21 2 2 0.50 1 0 0 1 0 0 0
.............................................................................................................................................................................................................................................................AGCACTGGAGTTGGAACCGT............................................................................................................................ 20 3 4 0.50 2 2 0 0 0 0 0
..................................................................................................................................................................................................................................................AGCGCGGCTGCAGCGGTGTA....................................................................................................................................... 20 3 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................................AGCGCGGCTGCAGAGGTGGA....................................................................................................................................... 20 3 6 0.17 1 0 0 0 1 0 0
..................................................................................................................................................................................................................................................AGCGCGGTTGCAGAGCTGTA....................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0
.......................................................................................................................................................................................TAGATATAAATAAACGTGGT.................................................................................................................................................................................................. 20 3 20 0.05 1 0 0 0 0 0 1
.........................................................................................................................................................................................................................................................................GGAACCCTGGCTGACGTCG................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................................AGCGCGGCTGCAGGGGTG......................................................................................................................................... 18 3 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................................................................................................AGCGCGGATGCAGAGGTGT........................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:9777963-9778359 - dps_3114 ATTAACAAATG---------CAACATTAATAACAAAATGGTTAGCAG-AAGCGTAGAAAGGTGAGTTTTCCCCC-AATTTAGA-AC---GAG-----GCGTG--AGCGGCA-TAGATTACGCAAGACGCACG------TACGGCCAGCGAGTGCAGCGGAGTTCTGGAATTCCCAGGGC--ACCTGGTCTGGTTATGCAATTTGTTTCGCGGCTT-----TCTTTATTTATTTG---------CATCAGACCATGGCTTCTGTGAAGGC----AGCTGCAGTCGGGAACTATC---GCGCCTACGTCG-------------CGACCTTAACCTTGGTAGCGACTGCGGCTCCGTCTGCAGATA---------ACTGTGATTGATGCATGCCCCA-T--------------------------------TACGCTTGAATTCTTTC---TTTATGCAGTACGAGTAAAGTGC-CGACATTCCATGTCATAAGGGAGGTATACGACAGCT
droPer2 scaffold_61:52997-53382 - ATTAACAAATG---------CAACATTAATAACAAAATGGTTAGCAG-AAGCGTAGAAAGGTGAGTTTTCCCCCCAATTTAGG-AC---GAG-----GCGTG--AGCGGCG-TAGATTACGCAAGACGCACG------TACGGCCAGCGAGTGCAGCGGAGTTCTGGAATTCCCAGGGC--ACCTGGTCTGGTTATGCAATTTGTTTCGCGGCTT-----TCTTTATTTATTTG---------ACTCAGACCATGGCTTCTGTGGAGGC----AGCTGCAGTCG-------GG----A----ACGTCG-------------CGACCTTAACCTTGGTAGCGACTGCGGCTCCGTCTGCAGATA---------ACTGTGATTGATGCATGCCCCA-T--------------------------------TACGCTTGAATTCTTTC---TTTATGCAGTACGAGTAAAGTGC-CGACATTCCATGTCATAAGGGAGGTATACGACAGCT
droWil2 scf2_1100000004511:3743245-3743378 - A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATA---------ACTGTGATTGATAACTTTT--CTCCTTCCCTCTCTCTCTCTCACTCCTTTTCTCTTTCTCTCT-CTTTCTCAT---CTCTTTCAGCACCAACAAAGTGC-CCACTTTTCATGTGATTCGTGAGGTTTACGACAGTT
droVir3 scaffold_13049:8323779-8323850 + GTTTGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTG---TTTGTACAGTACAGGCAAGCAGC-CAACATTTCATGTGATACGTGAAGTCTACGACAGTT
droMoj3 scaffold_6680:11978141-11978195 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGTACAGGCAAGCAGC-CAACATTTCATGTCATTCGAGAAGTCTACGACAGTT
droGri2 scaffold_15110:7352580-7352652 + GCCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATACACTT---TATTTACAGTGCAGGCAAGCAAC-CAACATTTCATGTCATACGTGAAGTCTATGACAGTT
droAna3 scaffold_13337:12767382-12767779 - dan_2602 AACAAAATAAAAAAAAAAAACAAATACTTTGCAAAAATGGTTAGCAG-GAACATAGAAAGGTAAATATTGCGGATGAATTTGA-GCTCT---GA-----GTTGCTGCAGTG-GAGATTATGCAACGCACTTTTTCTCAAACTGCAAGCTGCTTCAGTCAGCGTCTGG----CTTAGTGC--ACCTGATCGGGTTATGCAATTTTGTTTGCGGCT---------TTATTTATCTGCTCTGGACCGACCGGACAATGACTTCGGGGGTATCT---CTCCACTGCAC-------T---GAC-GCTTAATCTCAGAGGGCCTCCATGAACTTAACCTTGC-----------TCT--GCTGTCTGATA---------GCCGTGATTGATGTACTC-----------------------------------------------TTCTTTTTTCTTGGTCGCAGCACGAGTAAAGTGC-CGACTTTCCATGTAATCCGAGAGGTGTACGATAGCT
droBip1 scf7180000396589:1255245-1255638 + ACAAAATAAAAAAAAAACAA---AAACTTTGCGAAAATGGTTAGCAG-GAACATAGAAAGGTAAGTATTGCGGACGAATTGGA-ACTCT---AA-----GATACAGCAGTG-TGGATTATGCAACGTACTCTTCCTCAAGCTGCAAGCTACTTGAGTCGGCGTCTGG----CTTAGTGC--ACCTGATCGGGTTATGCAATTTTTTATGCGGCT---------TTATTTATCTGCACTGGAC-AGCCGGACAATGACTTCTGGGGTATCTCTCCACTGCAGT-------------GGG-GCTTAATCTCTGAGGGCGGCCATGAACTTAACCTTG-------------CTCCGCAGTCAGATA---------GCCGTGATTGATGGAGTCTTCT-T-----------------------------------------T-TCTC-T---TGTTTGCAGCACGAGTAAAGTTC-CGACTTTCCATGTAATCCGAGAGGTATACGACAGCT
droKik1 scf7180000302686:70848-71232 + ATTAACAAAAAAAAA---AACAAA-TTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATATTACGGAAAA-TTCTAACCGCC---TA----CTTGGCTGT-GTG--AGATTATGCAACGCCCTCGAGCT------CTGGTCTACATCAGTGGAGCTCCGGATCTTGGCGTGC--ACCTTTCCCGGTTATGCAATTTGA-----------------TTTATTTATCTTCTG------CGCCGGACAATGGCTTCTGTGACGGC-CCCAACTGCAGT-------------GCG-GCATAATCTC-------CAGCTTGACCTTAACCTTGGA-CTGACT---GCTCCAG-CAGAGATAAAGGCCTGAGCAGTGATTGATGTCCCC---------------------------------------A------AATCTTTGA---CCTTTCCAGCACGAGTAAAGTGC-CGACTTTCCATGTCATCCGGGAGGTGTACGACAGCT
droFic1 scf7180000453929:1842981-1843332 - ATTAACAAAATAAAAAACAACAAATTGATTAGCAAAATGGTTAGCAG-AAACTTAGAAAGGTAAATATTGCTCC------------------GGGTGACGATAATGCAGTTGGTTATTACGCAACGAGTTCCACCT----------GTGGGCGCAGCCAAATCCCAGATCTAGAAGTTC--ATCTGTTTCTGTTATGCAATTTACCAGGCGGCT------TCTTTATTTAT---------------CGGACAATGGCTTTTC------------------------------GAGGAG-GCTTAATCT-------------TGAACTTAACCTTGG-----------GCTGCCGATCATGATA---------GTCTTGATTAATGATTTCT---TT--------------------------------TAAATAATGT-AACGCT---CCTTTTCAGCACGAGTAAAGTTC-CGACTTTCCATGTAATTCGCGAGGTCTATGACAGTT
droEle1 scf7180000491268:1269786-1270148 + ATTAACAAAATAAAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATATTGGTCC------------------GAGAATCGCTAACGCA-----GGATTACGCAACTAGTCCTATCT----------GTGGGTGCAGCCGTATCCCAGATTGTGGAGTGCACACCTGTTTTGGTTATGCAATTTACCAGGCGGCTTCGGCTTCTACA-TTATCTC---------CGCCGGACAATGGTTTCCC------------------------------GCGGAG-GCTTAATCT-------------TGACCTTAACCTTGAA----------AGTCCAGATCCAGATA---------GCCTTGATTAATGGCTTCC--ATT--------------------------------CACATATTTCTCCTCCT---CTTGTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTCATCCGCGAGGTTTACGACAGTT
droRho1 scf7180000768851:61636-61990 + -----CAAAATAAAAACAAAAAAATTTATTAGCAAAATGGTTAGCAGTAAACATAGAAAGGTAAATATTGGTAATTATCC------------GG----TAATAATGCAGTC-GAAATTACGCAACGAGCTCTCCCT----------GTGGGTGCAACCGCAACCCAGATCTTCGAGTGG--ACCTGTTTTGGTTATGCAATTTAGCAGGCGGCT------TCTTTAT-TATCTC---------CGCCGGACAATGGTTTTCC------------------------------AAGGAG-GCTTAATCT-------------CGACCTTAACCTTGGA----------AGTCCAGGTCAAGATA---------GACGTGATTAATGGCTTCC--ATT--------------------------------TATATAT-AT-TTTCCT---CTTCTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTTATCCGCGAGGTATACGACAGTT
droBia1 scf7180000302193:3275995-3276345 + ATTAACAAAATAAAAAACAACAAATTTATTAGTAAAATGGTTAGCAG-AAACATAGAAAGGTAAATATTACTGC------------------GAGCGGCGTTGATGCAGTG-AGGATTACGCAACGAGCTGTGCCT------------GGGCGCAGCCCAGTTCCAGATCGCGAAGTGC--ACCTTCTCTGGTTATGCAATTTACCAGGCGGCT------TCTTTATTTATCTC---------C-CCGCACAATGGCTTCTGCC---------------CGTTT-----------GGA-GCTTAATCT-------------CGACCTTAACCTTGG-----------ATTCCACACCCAGATA---------GCCGCGATTGAT-----------T--------------------------------TGTTTGTTTTCGGGCTC---TTTCTGCAGCACGAGTAAGGTGC-CCACGTTCCATGTCATCCGCGAGGTCTACGACAGCT
droTak1 scf7180000415868:477292-477654 + ATTAACAAAATAAAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAACATTGAAAGGTAAATACTATTCC------------------GAGAGACGTTGATGCAGTG-CGGATTACGCAACTAGTTAAAT------------GCGGGTGCGGCACAGTTCCAGATCTTAAAGTGC--ACCTTTTCTGGTTATGCAATTTAGCAGGCGGCT------TCTGTATTTATCTC---------CGCCGGACAATGGCTTCTGCTTCTGC----TTCTGCCGATT-----------GGG-ACTTAATCT-------------CGACCTTAACCTTGG-----------TTTCCAGATCAAGATA---------GCCATGATTGAT-----------T--------------------------------TATACACGACTCCTCTC---TCTTTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGTT
droEug1 scf7180000409466:3542931-3543280 + ATTAACA---TAAAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAACTTAGAAAGGTAAATAAGACTCG------------------GAGTGACGTTGGTGTAGTG-GGTATTACGCAACGAATTCTGCCT------------AGTTTCGGGCGTATCCCAGATCTTAAAGTGC--ACCTGTTCTGATTATGCAATTTACCAGGCGGCT------TCTTTATTTATCTCCC-------CCCCGGACAATGGCTTCTGCG----------------GTTT-----------GGG-GCTTAATCT-------------CGACCTTAACCTTAT-----------GTTTCTGATCAAGATA---------GCCATGATTGAT-----------T--------------------------------TATATGTTTTTCGTCTA---CTTTCGCAGCACGAGTAAAGTTC-CGACTTTCCATGTCATCCGAGAAGTCTACGACAGTT
dm3 chr3L:5773175-5773533 + ATGAACAACATAGAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCC------------------TAGTTACGTGAATGCAGTG--GGATTACGCAACACATTCCACCT------------GGGTGCAGCCAAATCCCAGTTC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTCATTTATCTC---------GTCTGCACAATGGCTTCTCTG----C----TTCGGTTGTTC-------TGA--GC-GCTTGATCT-------------TGACCTTAACCTTGA-----------GTTCCACATCAAGATA---------ACCATGATTGAT-----------T--------------------------------CGTGTATTGTTGTTCTA---ATTGTGCAGCACGAGTAAGGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGCT
droSim2 3l:5686181-5686539 + dsi_9414 ATTAACAACATAGAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCC------------------CAGTTACGCGGATGCAGTG--GGATTACGCAACGCATTCCATCT------------GGGTGCAGCCAAATCGCAGTTC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTAGTAGGCGGCT------TCTTCATTTATCTC---------GTCCGGACAATGGCTTCTCTG----C----TTCGGTTGTTC-------TGA--GC-GCTTGATCT-------------TGACCTTAACCTTGA-----------GCTCCACATCAAGATA---------ACCATGATTGAT-----------T--------------------------------CGTGTATTGTTGTTCTA---CTTGTGCAGCACCAGTAAGGTGC-CAACTTTCCATGTCATCCGCGAGGTCTACGACAGCT
droSec2 scaffold_2:5710356-5710469 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCTTAACCTTGA-----------GCT-CACATC-AGATA---------ACCATGAT-GAT-----------T--------------------------------CGTGTAT-GT-GTTCTA----CTGTGCAGCACCAGTAAGGTGCCCCACTTTCCATGTCATTCGCGAGGTCTACGACAGCT
droYak3 3L:6342661-6343017 + ATTAACAACATAGAAAACAACAAATTTATTAGCAAAATGGTTAGCAA-AAATATAGAAAGGTAAATACGGCGCC------------------CAGTTACGTAGATGCACTG--GGATTACGCAACGCACTCGACCT------------GGGTGCAGCCGAATTCCAGATC-ACAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTTATTTATCTC---------GACTGGACAATGGCTTCTGTG----C----TTCTGTTGTTC-------TC----A-GCTTAATCT-------------TGACCTTAACCTTGA-----------GCTGCACATCCAGATA---------ACCGTGATTGAT-----------T--------------------------------TGTGTGTTGTTCTTCTA---CTTGTCCAGCACGAGTAAGGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGTT
droEre2 scaffold_4784:8463813-8464170 + ATTAACAACATAGAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCC------------------CAGTTACGTGGATGCAGTG--GGATTGCGCAACGCATTCTACAT----------G-GGGTGCAGCCGAATTCCAGTGC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTTATTTATCTC---------GCCTGGACAATGGCTTCTGTG----C----TTCTGTTGTTC-------TG----A-GCTTAGTCT-------------TGACCTTAACCTTGA-----------GTTTCACATGAAGATA---------ACCGCGATTGAT-----------T--------------------------------TGTGTATTGTTCTTGTA---CTTGCCCAGCACGAGTAAGGTGC-ACACTTTCCATGTCATCCGCGAGGTCTACGACAGTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ATTAACAAATG---------CAACATTAATAACAAAATGGTTAGCAG-AAGCGTAGAAAGGTGAGTTTTCCCCC-AATTTAGA-AC---GAG-----GCGTG--AGCGGCA-TAGATTACGCAAGACGCACG------TACGGCCAGCGAGTGCAGCGGAGTTCTGGAATTCCCAGGGC--ACCTGGTCTGGTTATGCAATTTGTTTCGCGGCTT-----TCTTTATTTATTTG---------CATCAGACCATGGCTTCTGTGAAGGC----AGCTGCAGTCGGGAACTATC---GCGCCTACGTCG-------------CGACCTTAACCTTGGTAGCGACTGCGGCTCCGTCTGCAGATA---------ACTGTGATTGATGCATGCCCCA-T--------------------------------TACGCTTGAATTCTTTC---TTTATGCAGTACGAGTAAAGTGC-CGACATTCCATGTCATAAGGGAGGTATACGACAGCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................CCTTAACCTTGGTAGCGACT....................................................................................................................................................................2011.0010100000000
..............................AACAAAATGGTTAGCAG-AAGCGTAGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCATAAGGGAGGTATACGACAGCT2711.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCTTGAATTCTTTC---TTTAT.......................................................2111.0010100000000
................................................................GTTTTCCCCC-AATTTAGA-AC---GAG-----...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
........................................................................................................................................................................................................................................................................................................GCGCCTACGTCG-------------CGACCTTAACC................................................................................................................................................................................2311.0010100000000
...............................................................AGTTTTCCCCC-AATTTAGA-AC---GAG-----...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
..................................................................................A-AC---GAG-----GCGTG--AGCGGCA-............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.................................................................................GA-AC---GAG-----GCGTG--AGCGGCA-T...........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................C---GAG-----GCGTG--AGCGGCA-TAGAT.......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................................ATGGTTAGCAG-AAGCGTAGAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................................................................................................................................................................................................................................................GACCATGGCTTCTGTGAAGGC----A..........................................................................................................................................................................................................................................2211.0010000010000
......................................................................................................................................................................................................................................TTTG---------CATCAGACCATGGCTTCTG......................................................................................................................................................................................................................................................2311.0010100000000
............................................................................................................................................................................................................................................................................C----AGCTGCAGTCGGGAACTATC---G...................................................................................................................................................................................................................2211.0010000001000
droPer2
ATTAACAAATG---------CAACATTAATAACAAAATGGTTAGCAG-AAGCGTAGAAAGGTGAGTTTTCCCCCCAATTTAGG-AC---GAG-----GCGTG--AGCGGCG-TAGATTACGCAAGACGCACG------TACGGCCAGCGAGTGCAGCGGAGTTCTGGAATTCCCAGGGC--ACCTGGTCTGGTTATGCAATTTGTTTCGCGGCTT-----TCTTTATTTATTTG---------ACTCAGACCATGGCTTCTGTGGAGGC----AGCTGCAGTCG-------GG----A----ACGTCG-------------CGACCTTAACCTTGGTAGCGACTGCGGCTCCGTCTGCAGATA---------ACTGTGATTGATGCATGCCCCA-T--------------------------------TACGCTTGAATTCTTTC---TTTATGCAGTACGAGTAAAGTGC-CGACATTCCATGTCATAAGGGAGGTATACGACAGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................G-AAGCGTAGAAAGGTGAGTTTTCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000002
................................................................................................................................................................................................................................................................................................................................................TAGCGACTGCGGCTCCGTCTG.......................................................................................................................................................2111.001000001
..................................................GCGTAGAAAGGTGAGTTTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
................................................................................................................................................................................................................................................................................................................................................TAGCGACTGCGGCTCCGTCT........................................................................................................................................................2011.001010000
.......................................GTTAGCAG-AAGCGTAGAAAGGTGAGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
................................................................................................................................................................................................................................................................CTTCTGTGGAGGC----AGCTGCAG...................................................................................................................................................................................................................................2111.001010000
................................CAAAATGGTTAGCAG-AAGCGTAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
droWil2
A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATA---------ACTGTGATTGATAACTTTT--CTCCTTCCCTCTCTCTCTCTCACTCCTTTTCTCTTTCTCTCT-CTTTCTCAT---CTCTTTCAGCACCAACAAAGTGC-CCACTTTTCATGTGATTCGTGAGGTTTACGACAGTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGC-CCACTTTTCATGT.......................1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTCATGTGATTCGTGAGGT...........2211.00101000
droVir3
GTTTGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTG---TTTGTACAGTACAGGCAAGCAGC-CAACATTTCATGTGATACGTGAAGTCTACGACAGTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTG---TTTGTACAGTACAGGA............................................2012.002000000000000000000000000000000000200000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATACGTGAAGTCTACGAC....2111.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGATACGTGAAGTCTACGACAG..2411.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTGATACGTGAAGTCTACGACA...2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAAGCAGC-CAACATTTCATGTG......................2711.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAGTACAGGCAAGCAGC-CAACATTTCATGTCATTCGAGAAGTCTACGACAGTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GCCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATACACTT---TATTTACAGTGCAGGCAAGCAAC-CAACATTTCATGTCATACGTGAAGTCTATGACAGTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AACAAAATAAAAAAAAAAAACAAATACTTTGCAAAAATGGTTAGCAG-GAACATAGAAAGGTAAATATTGCGGATGAATTTGA-GCTCT---GA-----GTTGCTGCAGTG-GAGATTATGCAACGCACTTTTTCTCAAACTGCAAGCTGCTTCAGTCAGCGTCTGG----CTTAGTGC--ACCTGATCGGGTTATGCAATTTTGTTTGCGGCT---------TTATTTATCTGCTCTGGACCGACCGGACAATGACTTCGGGGGTATCT---CTCCACTGCAC-------T---GAC-GCTTAATCTCAGAGGGCCTCCATGAACTTAACCTTGC-----------TCT--GCTGTCTGATA---------GCCGTGATTGATGTACTC-----------------------------------------------TTCTTTTTTCTTGGTCGCAGCACGAGTAAAGTGC-CGACTTTCCATGTAATCCGAGAGGTGTACGATAGCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................CAATGACTTCGGGGGTATCT---C..........................................................................................................................................................................................................................................2111.001100000
.......................ATACTTTGCAAAAATGGTTAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
droBip1
ACAAAATAAAAAAAAAACAA---AAACTTTGCGAAAATGGTTAGCAG-GAACATAGAAAGGTAAGTATTGCGGACGAATTGGA-ACTCT---AA-----GATACAGCAGTG-TGGATTATGCAACGTACTCTTCCTCAAGCTGCAAGCTACTTGAGTCGGCGTCTGG----CTTAGTGC--ACCTGATCGGGTTATGCAATTTTTTATGCGGCT---------TTATTTATCTGCACTGGAC-AGCCGGACAATGACTTCTGGGGTATCTCTCCACTGCAGT-------------GGG-GCTTAATCTCTGAGGGCGGCCATGAACTTAACCTTG-------------CTCCGCAGTCAGATA---------GCCGTGATTGATGGAGTCTTCT-T-----------------------------------------T-TCTC-T---TGTTTGCAGCACGAGTAAAGTTC-CGACTTTCCATGTAATCCGAGAGGTATACGACAGCTSizeHit CountTotal NormTotal
No Reads
droKik1
ATTAACAAAAAAAAA---AACAAA-TTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATATTACGGAAAA-TTCTAACCGCC---TA----CTTGGCTGT-GTG--AGATTATGCAACGCCCTCGAGCT------CTGGTCTACATCAGTGGAGCTCCGGATCTTGGCGTGC--ACCTTTCCCGGTTATGCAATTTGA-----------------TTTATTTATCTTCTG------CGCCGGACAATGGCTTCTGTGACGGC-CCCAACTGCAGT-------------GCG-GCATAATCTC-------CAGCTTGACCTTAACCTTGGA-CTGACT---GCTCCAG-CAGAGATAAAGGCCTGAGCAGTGATTGATGTCCCC---------------------------------------A------AATCTTTGA---CCTTTCCAGCACGAGTAAAGTGC-CGACTTTCCATGTCATCCGGGAGGTGTACGACAGCTSizeHit CountTotal NormTotal
No Reads
droFic1
ATTAACAAAATAAAAAACAACAAATTGATTAGCAAAATGGTTAGCAG-AAACTTAGAAAGGTAAATATTGCTCC------------------GGGTGACGATAATGCAGTTGGTTATTACGCAACGAGTTCCACCT----------GTGGGCGCAGCCAAATCCCAGATCTAGAAGTTC--ATCTGTTTCTGTTATGCAATTTACCAGGCGGCT------TCTTTATTTAT---------------CGGACAATGGCTTTTC------------------------------GAGGAG-GCTTAATCT-------------TGAACTTAACCTTGG-----------GCTGCCGATCATGATA---------GTCTTGATTAATGATTTCT---TT--------------------------------TAAATAATGT-AACGCT---CCTTTTCAGCACGAGTAAAGTTC-CGACTTTCCATGTAATTCGCGAGGTCTATGACAGTTSizeHit CountTotal NormTotal
No Reads
droEle1
ATTAACAAAATAAAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATATTGGTCC------------------GAGAATCGCTAACGCA-----GGATTACGCAACTAGTCCTATCT----------GTGGGTGCAGCCGTATCCCAGATTGTGGAGTGCACACCTGTTTTGGTTATGCAATTTACCAGGCGGCTTCGGCTTCTACA-TTATCTC---------CGCCGGACAATGGTTTCCC------------------------------GCGGAG-GCTTAATCT-------------TGACCTTAACCTTGAA----------AGTCCAGATCCAGATA---------GCCTTGATTAATGGCTTCC--ATT--------------------------------CACATATTTCTCCTCCT---CTTGTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTCATCCGCGAGGTTTACGACAGTTSizeHit CountTotal NormTotal
No Reads
droRho1
-----CAAAATAAAAACAAAAAAATTTATTAGCAAAATGGTTAGCAGTAAACATAGAAAGGTAAATATTGGTAATTATCC------------GG----TAATAATGCAGTC-GAAATTACGCAACGAGCTCTCCCT----------GTGGGTGCAACCGCAACCCAGATCTTCGAGTGG--ACCTGTTTTGGTTATGCAATTTAGCAGGCGGCT------TCTTTAT-TATCTC---------CGCCGGACAATGGTTTTCC------------------------------AAGGAG-GCTTAATCT-------------CGACCTTAACCTTGGA----------AGTCCAGGTCAAGATA---------GACGTGATTAATGGCTTCC--ATT--------------------------------TATATAT-AT-TTTCCT---CTTCTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTTATCCGCGAGGTATACGACAGTTSizeHit CountTotal NormTotal
No Reads
droBia1
ATTAACAAAATAAAAAACAACAAATTTATTAGTAAAATGGTTAGCAG-AAACATAGAAAGGTAAATATTACTGC------------------GAGCGGCGTTGATGCAGTG-AGGATTACGCAACGAGCTGTGCCT------------GGGCGCAGCCCAGTTCCAGATCGCGAAGTGC--ACCTTCTCTGGTTATGCAATTTACCAGGCGGCT------TCTTTATTTATCTC---------C-CCGCACAATGGCTTCTGCC---------------CGTTT-----------GGA-GCTTAATCT-------------CGACCTTAACCTTGG-----------ATTCCACACCCAGATA---------GCCGCGATTGAT-----------T--------------------------------TGTTTGTTTTCGGGCTC---TTTCTGCAGCACGAGTAAGGTGC-CCACGTTCCATGTCATCCGCGAGGTCTACGACAGCTSizeHit CountTotal NormTotal
No Reads
droTak1
ATTAACAAAATAAAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAACATTGAAAGGTAAATACTATTCC------------------GAGAGACGTTGATGCAGTG-CGGATTACGCAACTAGTTAAAT------------GCGGGTGCGGCACAGTTCCAGATCTTAAAGTGC--ACCTTTTCTGGTTATGCAATTTAGCAGGCGGCT------TCTGTATTTATCTC---------CGCCGGACAATGGCTTCTGCTTCTGC----TTCTGCCGATT-----------GGG-ACTTAATCT-------------CGACCTTAACCTTGG-----------TTTCCAGATCAAGATA---------GCCATGATTGAT-----------T--------------------------------TATACACGACTCCTCTC---TCTTTGCAGCACGAGTAAAGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGTTSizeHit CountTotal NormTotal
No Reads
droEug1
ATTAACA---TAAAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAACTTAGAAAGGTAAATAAGACTCG------------------GAGTGACGTTGGTGTAGTG-GGTATTACGCAACGAATTCTGCCT------------AGTTTCGGGCGTATCCCAGATCTTAAAGTGC--ACCTGTTCTGATTATGCAATTTACCAGGCGGCT------TCTTTATTTATCTCCC-------CCCCGGACAATGGCTTCTGCG----------------GTTT-----------GGG-GCTTAATCT-------------CGACCTTAACCTTAT-----------GTTTCTGATCAAGATA---------GCCATGATTGAT-----------T--------------------------------TATATGTTTTTCGTCTA---CTTTCGCAGCACGAGTAAAGTTC-CGACTTTCCATGTCATCCGAGAAGTCTACGACAGTTSizeHit CountTotal NormTotal
No Reads
dm3
ATGAACAACATAGAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCC------------------TAGTTACGTGAATGCAGTG--GGATTACGCAACACATTCCACCT------------GGGTGCAGCCAAATCCCAGTTC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTCATTTATCTC---------GTCTGCACAATGGCTTCTCTG----C----TTCGGTTGTTC-------TGA--GC-GCTTGATCT-------------TGACCTTAACCTTGA-----------GTTCCACATCAAGATA---------ACCATGATTGAT-----------T--------------------------------CGTGTATTGTTGTTCTA---ATTGTGCAGCACGAGTAAGGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................ATGATTGAT-----------T--------------------------------CGTGTATTGTT.....................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000010000000000
..........................................AGCAG-AAATATAGAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................ATGATTGAT-----------T--------------------------------CGTGTATTGTTGTTCT................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTAAGGTGC-CCACTTTCC...........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................GCAG-AAATATAGAAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000
......................................................................................................................................................................................................................................................................................................................................................................AGATA---------ACCATGATTGAT-----------T--------------------------------CGT.............................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TTGAT-----------T--------------------------------CGTGTATTGTTGTTC.................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
....................................................ATAGAAAGGTAAATACGGCGCC------------------TAGT............................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................GTTAGCAG-AAATATAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTAAGGTGC-CCACTTTCC...........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................AATATAGAAAGGTAAATACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TCTTCATTTATCTC---------GTCTGCA..................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCATGTCATCCGCGAGGT...........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AATGGTTAGCAG-AAATATAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AGTTACGTGAATGCAGTG--GGA........................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000
....................................ATGGTTAGCAG-AAATATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAAATTTATTAGCAAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AGTTACGTGAATGCAGTG--...........................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCACGAGTAAGGTGT-....................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................CATGATTGAT-----------T--------------------------------CGTGTATTGT......................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGTGC-CCACTTTCCATGTCAT....................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTAAGGTGC-CCACTTTCCATGTC......................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACAACATAGAAAACAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCCGCGAGGTCTACGACAGCT2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................GGTTAGCAG-AAATATAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGAGGTCTACGACA...1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................TGGTTAGCAG-AAATATAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATGTCATCCGCGAGGTC..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTATTAGCAAAATGGTTAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GCC------------------TAGTTACGTGAATGCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................AGTTACGTGAATGCAGTG--GGATT......................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................CGCC------------------TAGTTACGTGAATGCAGTG--GGA........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................AATATAGAAAGGTAAATACGGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.............................................................TAAATACGGCGCC------------------TAGTTACGTGAATGC.................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TTC-------TGA--GC-GCTTGATCT-------------TGACCTT....................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TATGCAATTTACTAGGCGGCT------TCTTC...........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGCAAAATGGTTAGCAG-AAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AATGGCTTCTCTG----C----TTCGGTT....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TTC-------TGA--GC-GCTTGATCT-------------TGACC......................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTA---ATTGTGCAGCACGAG.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AAAATGGTTAGCAG-AAATATAGAAAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TGA--GC-GCTTGATCT-------------TGACCTT....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AATGGTTAGCAG-AAATATAGAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATA---------ACCATGATTGAT-----------T--------------------------------CGTGTA..........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGTAAGGTGC-CCACT...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTTATTAGCAAAATGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.......................................GTTAGCAG-AAATATAGAAAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTTAGCAG-AAATATAGAAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTTCCATGTCATCCGCGAGGT...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGC-CCACTTTCCATGTCATC...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................ATTTATCTC---------GTCTGCACAATG.............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTTAGCAG-AAATATAGAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................AATGGTTAGCAG-AAATATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................ACTAGGCGGCT------TCTTCATTT.......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...........................ATTAGCAAAATGGTTAGCAG-AA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TGAT-----------T--------------------------------CGTGTATTGTTGTTCT................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................ATAGAAAGGTAAATACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................................................TGCAATTTACTAGGCGGCT------TCC.............................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................ATTAGCAAAATGGTTAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................TAAATACGGCGCC------------------TAGTTACG........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................ACAACAAATTTATTAGCAAAATGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................AAATGGTTAGCAG-AAATATAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCATCCGCGAGGTCTAT.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CAATTTACTAGGCGGCT------TCT.............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CAACACATTCCACCT------------GGGTGCA.................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TTACGTGAATGCAGTG--GGATT......................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTATTAGCAAAATGGTTAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TGCACAATGGCTTCTCTG----C----TTCGGT.....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ACCATGATTGAT-----------T--------------------------------CGTGTATTGTTGT...................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................TGAATGCAGTG--GGATTACGCAAA...............................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CTCTG----C----TTCGGTTGTTC-------TGA--G...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
................................................AAATATAGAAAGGTAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................C-------TGA--GC-GCTTGATCT-------------TGACCT.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCATCCGCGAGGTCTA........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................CT-------------TGACCTTAACCTTGA-----------GTTC.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................GTGAATGCAGTG--GGATTAC....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.................................................................................................ACGTGAATGCAGTG--GGAT.......................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................................................................TGCACAATGGCTTCTCTG----C----TT.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................ATATAGAAAGGTAAATACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................CGCC------------------TAGTTACGTGAATG..................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ATTGAT-----------T--------------------------------CGTGTATTGTTG....................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATCCGCGAGGTCTACGA.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATCCGCGAGGTCTACGAC....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................GCCAAATCCCAGTTC-CCAAGT...........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAGTAAGGTGC-CCACTTTCCATGT.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................A--GC-GCTTGATCT-------------TGACCTTAA..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................T-----------T--------------------------------CGTGTATTGTTGTTCTA---ATTGTG......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCAGCACGAGTAAGGTGC-C...................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCATGTCATCCGCGA..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TAGGCGGCT------TCTTCATTTATC....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GTTGTTC-------TGA--GC-GCTTGATCT-------------TGACCT.....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....................................................................................................................................................................................................................T------TCTTCATTTATCTC---------GTCTGCA..................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGTCATCCGCGAGGTCTA........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................TTACGTGAATGCAGTG--GGA........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..................................................................................................CGTGAATGCAGTG--GGATTA.....................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................GATTGAT-----------T--------------------------------CGTGTATTGTTG....................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................AAAATGGTTAGCAG-AAATATAGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAGCACGAGTAAGGTGC-....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................T-----------T--------------------------------CGTGTATTGTTGTTCTA---ATTG........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................ATGATTGAT-----------T--------------------------------CGTGTATTGTTG....................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................AATATAGAAAGGTAAATACGGCGCC------------------T...............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...............................GCAAAATGGTTAGCAG-AAATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TCTG----C----TTCGGTTGTTC-------TGA--GC-.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATCCGCGAGGTCTACGAC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATGTCATCCGCGAGGTC..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
........................................TTAGCAG-AAATATAGAAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................TTGTTC-------TGA--GC-GCTTGATCT-------------TG.........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droSim2
ATTAACAACATAGAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCC------------------CAGTTACGCGGATGCAGTG--GGATTACGCAACGCATTCCATCT------------GGGTGCAGCCAAATCGCAGTTC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTAGTAGGCGGCT------TCTTCATTTATCTC---------GTCCGGACAATGGCTTCTCTG----C----TTCGGTTGTTC-------TGA--GC-GCTTGATCT-------------TGACCTTAACCTTGA-----------GCTCCACATCAAGATA---------ACCATGATTGAT-----------T--------------------------------CGTGTATTGTTGTTCTA---CTTGTGCAGCACCAGTAAGGTGC-CAACTTTCCATGTCATCCGCGAGGTCTACGACAGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................TTTATCTC---------GTCCGGACAATGG............................................................................................................................................................................................................................................................2113.00300000000000003000
..............................................................................................................................................................................................................................TTCATTTATCTC---------GTCCGGACA................................................................................................................................................................................................................................................................2113.00300000000000003000
.................................................................................................................................................................................................................................ATTTATCTC---------GTCCGGACAATG.............................................................................................................................................................................................................................................................2113.00300000000000003000
..................................................................................................................................................................................................ATGCAATTTAGTAGGCGGCT------................................................................................................................................................................................................................................................................................................2012.00220000000000000000
..............................................................................................................................................................................................................................TTCATTTATCTC---------GTCCGGACAATGG............................................................................................................................................................................................................................................................2511.00110000000000000000
.................................................................................................ACGCGGATGCAGTG--GGATTACGCAAC...............................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
......................................................................................................................................................................................................AATTTAGTAGGCGGCT------TCTTTT..........................................................................................................................................................................................................................................................................................2211.00100000000000001000
............................................................................................................................................................................................................................................................................................................................................TTGA-----------GCTCCACATCAAGATA---------ACCATGA.................................................................................................................................2711.00100000010000000000
.................................................................................................................................................................TCGCAGTTC-CCAAGTGC--ACCT...................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCATCCGCGAGGTCTA........2111.00100000000001000000
.................................................................................................ACGCGGATGCAGTG--GGATTA.....................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCATGTCATCCGCGAGGTCTACGAC....2611.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTA---CTTGTGCAGCACCAG.............................................2111.00101000000000000000
..............................................................................................................................................................................................................................TTCATTTATCTC---------GTCCGGACAATGGC...........................................................................................................................................................................................................................................................2611.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................AAGATA---------ACCATGATTGAT-----------T--------------------------------CG..............................................................................2111.00100000000000001000
................................................................................................................................................................................................................................CATTTATCTC---------GTCCGGACAA...............................................................................................................................................................................................................................................................2011.00110000000000000000
............................................................................................................................................................................................................GTAGGCGGCT------TCTTCATTT.......................................................................................................................................................................................................................................................................................1911.00100000000000001000
..........................................................................................................................................................................................................TAGTAGGCGGCT------TCTTCATTT.......................................................................................................................................................................................................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................CACATCAAGATA---------ACCATGA.................................................................................................................................1911.00100001000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCATCCGCGAGGTCTACGAC....2111.00110000000000000000
...................................................................................................GCGGATGCAGTG--GGATTACG...................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.....................................................................................................................................................................................................................................ATCTC---------GTCCGGACAATGGCTT.........................................................................................................................................................................................................................................................2111.00100000000000001000
....................................................ATAGAAAGGTAAATACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
.............................TAGCAAAATGGTTAGCAG-AAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................TGACCTTAACCTTGA-----------GCTCCACATC.......................................................................................................................................................2511.00100000010000000000
......................................................................................................................................................................................................AATTTAGTAGGCGGCT------TCTTC...........................................................................................................................................................................................................................................................................................2111.00100000000000001000
droSec2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCTTAACCTTGA-----------GCT-CACATC-AGATA---------ACCATGAT-GAT-----------T--------------------------------CGTGTAT-GT-GTTCTA----CTGTGCAGCACCAGTAAGGTGCCCCACTTTCCATGTCATTCGCGAGGTCTACGACAGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATGTCATTCGCGAGGTCT.........2011.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCATTCGCGAGGTCTA........1911.0010100
droYak3
ATTAACAACATAGAAAACAACAAATTTATTAGCAAAATGGTTAGCAA-AAATATAGAAAGGTAAATACGGCGCC------------------CAGTTACGTAGATGCACTG--GGATTACGCAACGCACTCGACCT------------GGGTGCAGCCGAATTCCAGATC-ACAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTTATTTATCTC---------GACTGGACAATGGCTTCTGTG----C----TTCTGTTGTTC-------TC----A-GCTTAATCT-------------TGACCTTAACCTTGA-----------GCTGCACATCCAGATA---------ACCGTGATTGAT-----------T--------------------------------TGTGTGTTGTTCTTCTA---CTTGTCCAGCACGAGTAAGGTGC-CCACTTTCCATGTCATCCGCGAGGTCTACGACAGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTTGTTCTTCTA---CTTGTCCAG...................................................2611.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCATGTCATCCGCGAGGT...........2011.00101000000000
droEre2
ATTAACAACATAGAAAACAACAAATTTATTAGCAAAATGGTTAGCAG-AAATATAGAAAGGTAAATACGGCGCC------------------CAGTTACGTGGATGCAGTG--GGATTGCGCAACGCATTCTACAT----------G-GGGTGCAGCCGAATTCCAGTGC-CCAAGTGC--ACCTGCCCTGGTTATGCAATTTACTAGGCGGCT------TCTTTATTTATCTC---------GCCTGGACAATGGCTTCTGTG----C----TTCTGTTGTTC-------TG----A-GCTTAGTCT-------------TGACCTTAACCTTGA-----------GTTTCACATGAAGATA---------ACCGCGATTGAT-----------T--------------------------------TGTGTATTGTTCTTGTA---CTTGCCCAGCACGAGTAAGGTGC-ACACTTTCCATGTCATCCGCGAGGTCTACGACAGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................CGTGGATGCAGTG--GGATT......................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.....................................................................................................................................................................................................................................................CTGGACAATGGCTTCTGTG----C----TTCTG......................................................................................................................................................................................................................................2511.0010000010
.......................ATTTATTAGCAAAATGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.........................TTATTAGCAAAATGGTTAGCAG-AAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.....................................................................................................GGATGCAGTG--GGATTGCGCA.................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000
..................................................................................................................................CTACAT----------G-GGGTGCAGCCGAATTCCAGT....................................................................................................................................................................................................................................................................................................................................................2711.0010000010

Generated: 05/18/2015 at 06:08 AM