ID:

dps_304

 Coordinate:

2:1827590-1827740 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.5 -9.7 -9.7 -9.7

Flybase annnotation

CDS [Dpse\GA26954-cds]; exon [Dpse\GA26954:1]; intron [Dpse\GA26954-in]

No Repeatable elements found

mature
  1. dps_304  2:1827606-1827626 +
  2. Unknown_group_744:10177-10197 +
  3. Unknown_singleton_58:359-379 +
star
  1. dps_304  2:1827690-1827710 +
  2. Unknown_group_744:10261-10281 +
  3. Unknown_singleton_58:443-463 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCAAAGAATCCCTACACCAAAGCCAACTGCTTCTCACAATGGACATTCTGGTAAGTCTTTATCATAATCATAACCATACTATCGGCTCTGCCGTCCGTGCCTCTTATTATCATTAGTCATGTGCACATTATTTACGGTAAATTACATACTTTTTTTCTTTTTGTTGTCTCTGCGACTGTCTATGCCCATCCACATCAGATGTGTCTAGCACGTGTTGTACCATATTGTAGTGATATAGTGTGTATATGTAC
******************************************************************.................((...((((((..((((.....((((....)))).....)))).......))))))...........................))...******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902011
testis
 M059
embryo
 M022
male body		 M062
head
 GSM444067
head
 GSM343916
embryo
........................AACTGCTTCTCACAATGGACA.............................................................................................................................................................................................................. 21 0 3 12.67 38 35 0 2 0 1 0 0 0
..............................TTCTCACAATGGACATTCTGG........................................................................................................................................................................................................ 21 0 3 8.33 25 25 0 0 0 0 0 0 0
.............................CTTCTCACAATGGACATTCTG......................................................................................................................................................................................................... 21 0 3 5.33 16 13 0 3 0 0 0 0 0
.......................CAACTGCTTCTCACAATGGAC............................................................................................................................................................................................................... 21 0 3 4.00 12 12 0 0 0 0 0 0 0
...............................TCTCACAATGGACATTCTGGT....................................................................................................................................................................................................... 21 0 3 3.67 11 8 3 0 0 0 0 0 0
..................................................................ATCATAACCATACTATCGGCT.................................................................................................................................................................... 21 0 3 1.67 5 3 0 1 1 0 0 0 0
......................................................................................................................................................TTTTTTCTTTTTGTTGTCTCT................................................................................ 21 0 3 1.33 4 1 2 1 0 0 0 0 0
......................................................................................................................................................................TCTCTGCGACTGTCTATGCCC................................................................ 21 0 3 1.33 4 3 0 1 0 0 0 0 0
............................................................................................................................................................................CGACTGTCTATGCCCATCCAC.......................................................... 21 0 3 1.33 4 4 0 0 0 0 0 0 0
......................................................................................................................ATGTGCACATTATTTACGGTA................................................................................................................ 21 0 3 1.33 4 4 0 0 0 0 0 0 0
..............................................................................CTATCGGCTCTGCCGTCCGTG........................................................................................................................................................ 21 0 3 1.33 4 3 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATATTGTAGTGATATAGTGTG......... 21 0 3 1.33 4 2 2 0 0 0 0 0 0
.......................................................................................................................................................TTTTTCTTTTTGTTGTCTCTG............................................................................... 21 0 3 1.33 4 3 0 1 0 0 0 0 0
..AAAGAATCCCTACACCAAAGC.................................................................................................................................................................................................................................... 21 0 3 1.33 4 4 0 0 0 0 0 0 0
.....................................................................................CTCTGCCGTCCGTGCCTCTTA................................................................................................................................................. 21 0 3 1.33 4 3 1 0 0 0 0 0 0
..............................................................................................................................................................................................CACATCAGATGTGTCTAGCAC........................................ 21 0 3 1.33 4 2 0 2 0 0 0 0 0
.............................................................................ACTATCGGCTCTGCCGTCCGT......................................................................................................................................................... 21 0 3 1.33 4 4 0 0 0 0 0 0 0
....AGAATCCCTACACCAAAGCCA.................................................................................................................................................................................................................................. 21 0 3 1.00 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................TAGTGATATAGTGTGTATATG... 21 0 3 1.00 3 1 1 1 0 0 0 0 0
..............................TTCTCACAATGGACATTCTG......................................................................................................................................................................................................... 20 0 3 1.00 3 3 0 0 0 0 0 0 0
...............................................................................TATCGGCTCTGCCGTCCGTGC....................................................................................................................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0
........................................................................................................................................................TTTTCTTTTTGTTGTCTCTGC.............................................................................. 21 0 3 1.00 3 3 0 0 0 0 0 0 0
.....................................................................ATAACCATACTATCGGCTCTG................................................................................................................................................................. 21 0 3 1.00 3 3 0 0 0 0 0 0 0
.........................ACTGCTTCTCACAATGGACA.............................................................................................................................................................................................................. 20 0 3 1.00 3 3 0 0 0 0 0 0 0
.................................TCACAATGGACATTCTGGTAA..................................................................................................................................................................................................... 21 0 3 1.00 3 2 0 1 0 0 0 0 0
.....................GCCAACTGCTTCTCACAATGG................................................................................................................................................................................................................. 21 0 3 1.00 3 3 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATTGTAGTGATATAGTGTGT........ 21 0 3 1.00 3 2 1 0 0 0 0 0 0
...............................................................................................................................................................TTTGTTGTCTCTGCGACTGTC....................................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0
..AAAGAATCCCTACACCAAAG..................................................................................................................................................................................................................................... 20 0 3 1.00 3 3 0 0 0 0 0 0 0
...................................................................................................................................................................TTGTCTCTGCGACTGTCTATG................................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0
............TACACCAAAGCCAACTGCTTC.......................................................................................................................................................................................................................... 21 0 3 1.00 3 2 0 1 0 0 0 0 0
................................................................................................................................................................................................................................TTGTAGTGATATAGTGTGTAT...... 21 0 3 1.00 3 0 3 0 0 0 0 0 0
................................................................................................................................................................................................................CACGTGTTGTACCATATTGTA...................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0
..........................................................................................................TTATCATTAGTCATGTGCACA............................................................................................................................ 21 0 3 1.00 3 3 0 0 0 0 0 0 0
............................................................................................................................................................................................................CTAGCACGTGTTGTACCATAT.......................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................GCACGTGTTGTACCATATTGT....................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTTGTACCATATTGTAGTGAT................. 21 0 3 0.67 2 1 0 0 1 0 0 0 0
.....................................................................................................................................................................................................GATGTGTCTAGCACGTGTTGT................................. 21 0 3 0.67 2 1 1 0 0 0 0 0 0
.............................CTTCTCACAATGGACATTCTGG........................................................................................................................................................................................................ 22 0 3 0.67 2 2 0 0 0 0 0 0 0
.............ACACCAAAGCCAACTGCTTCT......................................................................................................................................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
..................................................................................CGGCTCTGCCGTCCGTGCCT..................................................................................................................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGTGTTGTACCATATTGTAGT.................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
...............................................................................................................................TTATTTACGGTAAATTACATA....................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
............................................ATTCTGGTAAGTCTTTATCA........................................................................................................................................................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TGTGTCTAGCACGTGTTGTAC............................... 21 0 3 0.67 2 0 2 0 0 0 0 0 0
........................................................................GCCATGCTATCGGCTCTGCCG.............................................................................................................................................................. 21 2 3 0.67 2 2 0 0 0 0 0 0 0
........................................................................................................................................................................TCTGCGACTGTCTATGCCCAT.............................................................. 21 0 3 0.67 2 1 0 1 0 0 0 0 0
....................................................................................................................................................................................................AGATGTGTCTAGCACGTGTTG.................................. 21 0 3 0.67 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CCATATTGTAGTGATATAGTG........... 21 0 3 0.67 2 1 0 0 0 0 0 1 0
.................................TCACAATGGACATTCTGGT....................................................................................................................................................................................................... 19 0 3 0.67 2 0 1 1 0 0 0 0 0
....................................................................................................................................................................TGTCTCTGCGACTGTCTATG................................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................CTGCGACTGTCTATGCCCATC............................................................. 21 0 3 0.67 2 1 0 1 0 0 0 0 0
.........................ACTGCTTCTCACAATGGACAT............................................................................................................................................................................................................. 21 0 3 0.67 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................TTTTTTTCTTTTTGTTGTCTC................................................................................. 21 0 3 0.67 2 2 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTGTACCATATTGTAGTGATA................ 21 0 3 0.67 2 1 1 0 0 0 0 0 0
.CAAAGAATCCCTACACCAAAG..................................................................................................................................................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
....GGAATCCCTACACCAAGGCCA.................................................................................................................................................................................................................................. 21 2 3 0.67 2 2 0 0 0 0 0 0 0
..........................................................................................................................................................TTCTTTTTGTTGTCTCTGCGA............................................................................ 21 0 3 0.67 2 2 0 0 0 0 0 0 0
............................................................................................................................................................CTTTTTGTTGTCTCTGCGACT.......................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
.................................................................................................................................................................TGTTGTCTCTGCGACTGTCT...................................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0
....................................................................CATAACCATACTATCGGCTCT.................................................................................................................................................................. 21 0 3 0.67 2 2 0 0 0 0 0 0 0
....................................CAATGGACATTCTGGTAAGTC.................................................................................................................................................................................................. 21 0 3 0.67 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................TTTCTTTTTGTTGTCTCTGCG............................................................................. 21 0 3 0.67 2 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................................ACGTGTTGTACCATATTGTAG..................... 21 0 3 0.67 2 1 0 1 0 0 0 0 0
........................................................................................................................................................................TCTGCGACTGTCTATGCCCA............................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATTGTAGTGATGTGGTGTGT........ 21 2 3 0.67 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................CCATCCACATCAGATGTGTCT............................................. 21 0 3 0.67 2 1 1 0 0 0 0 0 0
................................................................................................................................................................TTGTTGTCTCTGCGACTGTC....................................................................... 20 0 3 0.67 2 0 1 1 0 0 0 0 0
........................GGCTGCTTCTCACAATGGACA.............................................................................................................................................................................................................. 21 2 3 0.67 2 2 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATGTTGTAGTGATATAGTGTG......... 21 1 3 0.67 2 0 2 0 0 0 0 0 0
..........................................................................................................................................................................TGCGACTGTCTATGCCCATCC............................................................ 21 0 3 0.67 2 2 0 0 0 0 0 0 0
............................................................................TACTATCGGCTCTGCCGTCCG.......................................................................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
.......................................................................................................................................................................CTCTGCGACTGTCTATGCCCA............................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
.......ATCCCTACACCAAAGCCAACT............................................................................................................................................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0
..................................................................ATCATAACCATACTATCGG...................................................................................................................................................................... 19 0 3 0.67 2 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................TGTCTAGCACGTGTTGTACC.............................. 20 0 3 0.67 2 2 0 0 0 0 0 0 0
...........................................................................................................................................................................................................TCTAGCACGTGTTGTACCATA........................... 21 0 3 0.67 2 0 2 0 0 0 0 0 0
..............CACCAAGGCCAACTGCTTCTC........................................................................................................................................................................................................................ 21 1 3 0.67 2 2 0 0 0 0 0 0 0
........................AACTGCTTCTCACAATGGAC............................................................................................................................................................................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0
.......................CAACTGCTTCTCACAATGGACA.............................................................................................................................................................................................................. 22 0 3 0.67 2 2 0 0 0 0 0 0 0
.................................................................................TCGGCTCTGCCGTCCGTGCC...................................................................................................................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0
....GGAGTCCCTACACCAAGGCCA.................................................................................................................................................................................................................................. 21 3 4 0.50 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AGTGATATAGTGTGTATATGT.. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................ATCATGACCATACTATCGGCT.................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................TTCTCTGCGACTGTCTATGCC................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
....GGAGTCCCTACACCAAAGCCA.................................................................................................................................................................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0 0
......................CCAACTGCTTCTCACAATGGA................................................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................ACCATGCTATCGGCTCTGCCT.............................................................................................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................GCGACTGTCTATGCCCATCCA........................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GTACCATATTGTAGTGATAT............... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................................................................AAATTACATACTTTTTTTCTT............................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................GTTGTACCATATTGTAGTGA.................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATTGTAGTGATATAGTGTG......... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................GATCATAACCATACTATCGGC..................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................ATACTATCGGCTCTGCCGTCC........................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
............................................ATTCTGGTAAGTCTTTATC............................................................................................................................................................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................CTCTGCCGTCCGTGCCTCTT.................................................................................................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................TTCTTTTTGTTGTCTCTGCG............................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................AACCATACTATCGGCTCTGCC............................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................................................CTTATTATCATTAGTCATGTG................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................CTGTCTATGCCCATCCACATC....................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................TGTCTCTGCGACTGTCTGTGC.................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTGTACCATATTGTAGTGATT................ 21 1 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................GTTAGTCATGTGCACATTATT....................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................TCCGTGCCTCTTATTATCATT......................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
........................AGCTGCTTCTCACAATGGAC............................................................................................................................................................................................................... 20 1 3 0.33 1 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................ATTGTAGTGATATGGTGTGTA....... 21 1 3 0.33 1 0 1 0 0 0 0 0 0
..............CACCAAAGCCAACTGCTTCTCA....................................................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................CTCTGCGACTGTCTATGCCC................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATTGTAGTGATATGGTGTGT........ 21 1 3 0.33 1 1 0 0 0 0 0 0 0
..............CACCAAAGCCAACTGCTTCTC........................................................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................................TCATGTGCACATTGTTTACGG.................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
..........................CTGCTTCTCACAATGGACATTCT.......................................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................AATCATAACCATACTATCGGC..................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
............TACACCAAGGCCAACTGCTTC.......................................................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
........................AGCTGCTTCTCACAATGGACAT............................................................................................................................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TGTTGTAGTGATATGGTGTGT........ 21 2 3 0.33 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................CTGCGACTGTCTATGCCCAT.............................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................TGTTGTCTCTGCGACTGTCTA..................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................TCTTTTTGTTGTCTCTGCGA............................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0
........................GACTGCTTCTCACAATGGACA.............................................................................................................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................CTGCGACTGTCTGTGCCCATC............................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.......................CAACTGCTTCTCACAATGGA................................................................................................................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................ATCATAACCATACTATCGGCTC................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
......AGTCCCTACACCAAGGCCAAC................................................................................................................................................................................................................................ 21 2 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................GTCTATGCCCATCCACATCAG..................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
................CCAAAGCCAACTGCTTCTCACC..................................................................................................................................................................................................................... 22 1 3 0.33 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................TATGCCCATCCACATCAGAT................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................TCGGCTCTGCCGTCCGTGCCTC.................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
............................................................................TACTATCGGCTCTGCCGTC............................................................................................................................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................TCGGCTCTGCCGTCCGTGC....................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................GTTGTCTCTGCGACTGTCTATG................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................TGCTTCTCACAATGGACA.............................................................................................................................................................................................................. 18 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGTAGTGATATGGTGTGTATC..... 21 2 3 0.33 1 1 0 0 0 0 0 0 0
..................AAAGCCAACTGCTTCTCA....................................................................................................................................................................................................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................GTGTCTAGCACGTGTTGTAC............................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.............................CTTCTCACAATGGACATT............................................................................................................................................................................................................ 18 0 3 0.33 1 1 0 0 0 0 0 0 0
CCAAAGAATCCCTACACCAAA...................................................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...AGGAATCCCTACACCAAAGCC................................................................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................................TATTATCATTAGTCATGTGCA.............................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................TCTCACAATGGACATTCTGG........................................................................................................................................................................................................ 20 0 3 0.33 1 0 0 1 0 0 0 0 0
.....GAGTCCCTACACCAGAGCCAA................................................................................................................................................................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0 0
................CCAAGGCCAACTGCTTCTCACC..................................................................................................................................................................................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0
..................................CACAATGGACATTCTGGTAA..................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATGTTGTAGTGATATGGTGTG......... 21 2 3 0.33 1 0 1 0 0 0 0 0 0
..................................................................ATCATAACCATACTATCGGC..................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................CCATACTATCGGCTCTGCCGT............................................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................CAGATGTGTCTAGCACGTGTT................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ATTGTAGTGATATAGTGTGTAA...... 22 1 3 0.33 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TGTAGTGATATGGTGTGTATA..... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................ATAACCATACTATCGGCTCTGC................................................................................................................................................................ 22 0 3 0.33 1 0 0 0 0 0 1 0 0
...................................................................................................................................................ACTTTTTTTCTTTTTGTTGTC................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
....AGAATCCCTACACCAAAGCCC.................................................................................................................................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
...........CTACACCAAAGCCAACTGCTT........................................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..AGGGAGTCCCTACACCAAAGC.................................................................................................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0
................CCAAGGCCAACTGCTTCTCAC...................................................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................GCCATACTATCGGCTCTGCCG.............................................................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TTGTAGTGATATGGTGTGTAT...... 21 1 3 0.33 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................TCTTTTTGTTGTCTCTGCGAC........................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................................CGGCTCTGCCGTCCGTGCC...................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................CTGCTTCTCACAATGGAC............................................................................................................................................................................................................... 18 0 3 0.33 1 0 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................ATTGTAGTGATATAGTGTGTA....... 21 0 3 0.33 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................CATCGGATGTGTCTAGCACGT...................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................TTTTTGTTGTCTCTGCGACTG......................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................AATGGACATTCTGGTAAGTC.................................................................................................................................................................................................. 20 0 3 0.33 1 0 0 1 0 0 0 0 0
............................................................................TACTATCGGCTCTGCCGTCC........................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.......GTCCCTACACCAAGGCCAACT............................................................................................................................................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................TAACCATACTATCGGCTCTGC................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..............CACTAAGGCCAACTGCTTCTC........................................................................................................................................................................................................................ 21 2 3 0.33 1 0 0 0 1 0 0 0 0
...................................................................................GGCTCTGCCGTCCGTGCCTCTT.................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0
..................AAGGCCAACTGCTTCTCACA..................................................................................................................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CTGTTGTACCATATTGTAGTGA.................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0
................................................................TAATCATAACCATACTATCGGT..................................................................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0 0
..........................CTGCTTCTCACAATGGACATTC........................................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TGTTGTACCATATTGTAGTG................... 20 0 3 0.33 1 0 0 1 0 0 0 0 0
...........................................................................................................TATCATTAGTCATGTGCACAT........................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................ATACTATCGGCTCTGCCGTC............................................................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................GTCTCTGCGACTGTCTATGCC................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................GCTTTCTCACAATGGACATTCTGG........................................................................................................................................................................................................ 24 3 3 0.33 1 1 0 0 0 0 0 0 0
..............................TTCTCACGATGGACATTCTGG........................................................................................................................................................................................................ 21 1 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................CAGATGTGTCTGGCACGTGTT................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
..........................CTGCTTCTCACAATGGACA.............................................................................................................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................TCGGCTCTGCCGTCCGTGCCT..................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...............ACCAAGGCCAACTGCTTCTC........................................................................................................................................................................................................................ 20 1 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................ATCGGCTCTGCCGTCCGTGCC...................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................TCTGCGACTGTCTATGCCC................................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................TTTTTCTTTTTGTTGTCTCTGT.............................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................CCCATCCACATCAGATGTG................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................ATGGACATTCTGGTAAGTCTT................................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................................TCATGTGCACATTATTTACGG.................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.............................CTTCTCACAATGGACATTCT.......................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................TTTCTTTTTGTTGTCTCTGC.............................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................TCTCACAATGGACATTCTG......................................................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0
......AATCCCTACACCAAAGCCAAC................................................................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................CATACTATCGGCTCTGCCGTC............................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AGTGATATGGTGTGTATATGT.. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATATTGTAGTGATATGGTGTG......... 21 1 3 0.33 1 0 1 0 0 0 0 0 0
............................................................................................GTCCGTGCCTCTTATTATCAT.......................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................GTCTAGCACGTGTTGTACCAT............................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.CAAAGAATCCCTACACCAAA...................................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................TGTCTCTGCGACTGTCTATGC.................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..AAAGAGTCCCTACACCAAAGC.................................................................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
..................................CACAATGGACATTCTGGTAAGT................................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................................CATGTGCGCATTATCGACGGTA................................................................................................................ 22 3 3 0.33 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................TCTGCGACTGTCTATGCCCATCC............................................................ 23 0 3 0.33 1 1 0 0 0 0 0 0 0
............TACACCAAAGCCGGCTGCTTC.......................................................................................................................................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TGTTGTACCGTATTGTAGTGA.................. 21 1 3 0.33 1 0 1 0 0 0 0 0 0
...........................................................................................CGCCCGTCGCTCTTATTATC............................................................................................................................................ 20 3 3 0.33 1 0 1 0 0 0 0 0 0
...................................................................TCATAACCATACTATCGGCTC................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................CATCGGATGTGTCTGGCACGT...................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................CTATCGGCTCTGCCGTCCCTG........................................................................................................................................................ 21 1 3 0.33 1 0 0 0 0 0 0 1 0
........................................................................ACCATACTATCGGCTCTGC................................................................................................................................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0
............................................................................................................................................................CTTTTTGTTGTCTCTGCGAC........................................................................... 20 0 3 0.33 1 0 0 1 0 0 0 0 0
......................................................................TAACCATACTATCGGCTCTGCCG.............................................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0 0 0 0
.....GAATCCCTACACCAAAGCCA.................................................................................................................................................................................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................................................................................TTTTCTTTTTGTTGTCTCTGCG............................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0
............................................................ATCATAATCATAACCATACT........................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
................................................................................................................................................CATACTTTTTTTCTTTTTGTT...................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................TGTGCACATTATTTACGGTAA............................................................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................ACTGTCTATGCCCATCCACAT........................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................TGCTTCTCACAATGGACATTCT.......................................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0
........................................................................................................TATTATCATTGGTCATGTGCA.............................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.........CCCTACACCAAAGCCAACTGC............................................................................................................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
....AGAATCCCTACACCAAAGCC................................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................TGCACATTATTTACGGTAAAT............................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................................................................................................TACTTTTTTTCTTTTTGTTGT.................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GTGTTGTACCATATTGTAG..................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0
....GGAATCCCTACACCAAAGCCGG................................................................................................................................................................................................................................. 22 3 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................TCGGCTCTGCCGTCCGTGCTT..................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.......................................TGGACATTCTGGTAAGTCTT................................................................................................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................CTAGCGCGTGTTGTGCCATAT.......................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0
................CCAAGGCCAACTGCTTCTC........................................................................................................................................................................................................................ 19 1 3 0.33 1 1 0 0 0 0 0 0 0
..........................................ACATTCTGGTAAGTCTTTATC............................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TGTACCATATTGTAGTGATAT............... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................CGACTGTCTATGCCCATCCA........................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
.................................................................................TCGGCTCTGCCGTCCGTGCCTT.................................................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TACCATATTGTAGTGATATAG............. 21 0 3 0.33 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................CTATGCCCATCCACATCGGAT................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
........................AGCTGCTTCTCACAATGGACA.............................................................................................................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
.................................TCACAATGGACATTCTGGTAAA.................................................................................................................................................................................................... 22 1 3 0.33 1 0 0 1 0 0 0 0 0
.....GAATCCCTACACCAAGGCC................................................................................................................................................................................................................................... 19 1 3 0.33 1 1 0 0 0 0 0 0 0
.....................................AATGGACATTCTGGTAAGTCT................................................................................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
.........................................................................................................ATTATCATTAGTCATGTGCAC............................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CCATGTTGTAGTGATATAGTG........... 21 1 3 0.33 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................CGACTGTCTATGCCCATCCC........................................................... 20 1 3 0.33 1 0 0 0 0 0 0 0 1
..............................................................CATAATCATAACCATACTAT......................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................................TCTGCCGTCCGTGCCTCTTAT................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................................ATTAGTCATGTGCACATTATT....................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................CATCCACATCAGATGTGTCTA............................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................................GCTCTGCCGTCCGTGCCTCTT.................................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0
................................CTCACAATGGACATTCTGGT....................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................TCTCTGCGACTGTCTATGCC................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0
....................................................................CATGACCATACTATCGGCTCT.................................................................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TATTGTAGTGATGTAGTGTGT........ 21 1 3 0.33 1 0 1 0 0 0 0 0 0
................................................................................................................................................................TTGTTGTCTCTGCGACTGTCT...................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
................CCAAAGCCAACTGCTTCTCAC...................................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GTAGTGATATGGTGTGTATATTT.. 23 2 3 0.33 1 1 0 0 0 0 0 0 0
.....................GCCGGCTGCTTCTCACAATGG................................................................................................................................................................................................................. 21 2 4 0.25 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................TTGTGCCATGTTGTAGTGATA................ 21 2 4 0.25 1 0 1 0 0 0 0 0 0
........................................................................................................TGTTATCATTGGTCATGTGC............................................................................................................................... 20 2 4 0.25 1 1 0 0 0 0 0 0 0
............TACACCAAGGCCGGCTGCTTC.......................................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................................................................ATTGTTTACGGTAAATTGCAT........................................................................................................ 21 2 4 0.25 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATATTGTAGTGGTGTAGTGTG......... 21 2 4 0.25 1 1 0 0 0 0 0 0 0
..................GAGGCCGACTGCTTCTCACAA.................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 1 0 0 0 0 0
...........CTACACCGGGGCCAACTGCTT........................................................................................................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0 0 0 0
...........CTACACCAAGGCCAGCTGCTT........................................................................................................................................................................................................................... 21 2 4 0.25 1 1 0 0 0 0 0 0 0
..................................................................ATCGTGACCATACTGTCGGCT.................................................................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0
..........................................................................................CCGCCCGTCGCTCTTATTAT............................................................................................................................................. 20 3 6 0.17 1 1 0 0 0 0 0 0 0
..AAGGAGTCCCTACACCAAGG..................................................................................................................................................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0 0 0
.....................................................................GTGGCCATACTATCGGCTCTG................................................................................................................................................................. 21 3 6 0.17 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................TTCTTTTTGTTGTCTCTGT.............................................................................. 19 1 6 0.17 1 0 0 1 0 0 0 0 0
...........................................................................................CGCCCGTCGCTCTTATTAT............................................................................................................................................. 19 3 11 0.09 1 0 0 1 0 0 0 0 0
..................GGGGCCAACTGCTTCTCACA..................................................................................................................................................................................................................... 20 3 14 0.07 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................GTATTGTAGTGATGTGGTGT.......... 20 3 19 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................TACCACGTGTTGTAGGAT............................ 18 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

GGTTTCTTAGGGATGTGGTTTCGGTTGACGAAGAGTGTTACCTGTAAGACCATTCAGAAATAGTATTAGTATTGGTATGATAGCCGAGACGGCAGGCACGGAGAATAATAGTAATCAGTACACGTGTAATAAATGCCATTTAATGTATGAAAAAAAGAAAAACAACAGAGACGCTGACAGATACGGGTAGGTGTAGTCTACACAGATCGTGCACAACATGGTATAACATCACTATATCACACATATACATG
********************************************************************************.................((...((((((..((((.....((((....)))).....)))).......))))))...........................))...****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902011
testis
 GSM444067
head
 M022
male body		 GSM343916
embryo
 M059
embryo
 SRR902010
ovaries
 SRR902012
CNS imaginal disc
................................................................................................................................................................................ACAGATACGTTGAGGTGTAG....................................................... 20 3 14 13.86 194 89 103 0 2 0 0 0 0 0
GGTTTCTTAGGGATGTGGTTT...................................................................................................................................................................................................................................... 21 0 3 7.00 21 17 1 2 0 0 1 0 0 0
........AGGGATGTGGTTTCGGTTGAC.............................................................................................................................................................................................................................. 21 0 3 6.00 18 16 1 0 1 0 0 0 0 0
....TCTTAGGGATGTGGTTTCGGT.................................................................................................................................................................................................................................. 21 0 3 6.00 18 17 1 0 0 0 0 0 0 0
.....................CGGTTGACGAAGAGTGTTAC.................................................................................................................................................................................................................. 20 0 3 5.67 17 15 2 0 0 0 0 0 0 0
.........GGGATGTGGTTTCGGTTGAC.............................................................................................................................................................................................................................. 20 0 3 5.67 17 8 5 3 1 0 0 0 0 0
..........GGATGTGGTTTCGGTTGACGA............................................................................................................................................................................................................................ 21 0 3 5.67 17 12 0 4 0 1 0 0 0 0
GGTTTCTTAGGGATGTGGTT....................................................................................................................................................................................................................................... 20 0 3 5.00 15 11 2 2 0 0 0 0 0 0
..........GGATGTGGTTTCGGTTGAC.............................................................................................................................................................................................................................. 19 0 3 5.00 15 10 3 2 0 0 0 0 0 0
...........GATGTGGTTTCGGTTGACGA............................................................................................................................................................................................................................ 20 0 3 4.67 14 10 0 3 0 0 1 0 0 0
......TTAGGGATGTGGTTTCGGTTG................................................................................................................................................................................................................................ 21 0 3 4.00 12 11 1 0 0 0 0 0 0 0
........AGGGATGTGGTTTCGGTTGA............................................................................................................................................................................................................................... 20 0 3 4.00 12 9 3 0 0 0 0 0 0 0
....................TCGGTTGACGAAGAGTGTTAC.................................................................................................................................................................................................................. 21 0 3 3.33 10 9 1 0 0 0 0 0 0 0
...........................................................................................................................................................................CGCTGACAGATACGGGTAGGT........................................................... 21 0 3 3.33 10 9 1 0 0 0 0 0 0 0
.................GTTTCGGTTGACGAAGAGTGT..................................................................................................................................................................................................................... 21 0 3 3.33 10 7 3 0 0 0 0 0 0 0
..........GGATGTGGTTTCGGTTGACG............................................................................................................................................................................................................................. 20 0 3 3.33 10 9 1 0 0 0 0 0 0 0
...................................................................................CCGAGACGGCAGGCACGGA..................................................................................................................................................... 19 0 3 3.00 9 8 0 0 0 1 0 0 0 0
...................TTCGGTTGACGAAGAGTGTTA................................................................................................................................................................................................................... 21 0 3 3.00 9 6 3 0 0 0 0 0 0 0
.GTTTCTTAGGGATGTGGTTTC..................................................................................................................................................................................................................................... 21 0 3 3.00 9 7 1 0 0 0 0 0 1 0
...............................................................................................................................................................................GACAGATACGTTGAGGTGTAG....................................................... 21 3 7 2.71 19 10 9 0 0 0 0 0 0 0
.GTTTCTTAGGGATGTGGTTT...................................................................................................................................................................................................................................... 20 0 3 2.67 8 8 0 0 0 0 0 0 0 0
..........GGATGTGGTTTCGGTTGA............................................................................................................................................................................................................................... 18 0 3 2.67 8 8 0 0 0 0 0 0 0 0
........AGGGATGTGGTTTCGGTTG................................................................................................................................................................................................................................ 19 0 3 2.67 8 7 1 0 0 0 0 0 0 0
...........GATGTGGTTTCGGTTGACGAA........................................................................................................................................................................................................................... 21 0 3 2.67 8 5 0 2 0 0 0 0 1 0
.......TAGGGATGTGGTTTCGGTTG................................................................................................................................................................................................................................ 20 0 3 2.33 7 5 2 0 0 0 0 0 0 0
....TCTTAGGGATGTGGTTTCGG................................................................................................................................................................................................................................... 20 0 3 2.33 7 7 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GATACGGGTAGGTGTAGTCTA................................................... 21 0 3 2.33 7 4 2 0 0 1 0 0 0 0
....................................................................................CGAGACGGCAGGCACGGAGAA.................................................................................................................................................. 21 0 3 2.33 7 5 1 0 0 1 0 0 0 0
................GGTTTCGGTTGACGAAGAGTG...................................................................................................................................................................................................................... 21 0 3 2.00 6 6 0 0 0 0 0 0 0 0
...........................................GTAAGACCATTCAGAAATAGT........................................................................................................................................................................................... 21 0 3 2.00 6 6 0 0 0 0 0 0 0 0
...................TTCGGTTGACGAAGAGTGTT.................................................................................................................................................................................................................... 20 0 3 2.00 6 4 2 0 0 0 0 0 0 0
...TTCTTAGGGATGTGGTTTCGG................................................................................................................................................................................................................................... 21 0 3 2.00 6 6 0 0 0 0 0 0 0 0
.....................CGGTTGACGGAGAGTGTTAC.................................................................................................................................................................................................................. 20 1 3 2.00 6 4 2 0 0 0 0 0 0 0
............................CGAAGAGTGTTACCTGTAAGA.......................................................................................................................................................................................................... 21 0 3 2.00 6 5 1 0 0 0 0 0 0 0
...................................................................................CCGAGACGGCAGGCACGGAGG................................................................................................................................................... 21 1 3 1.67 5 4 1 0 0 0 0 0 0 0
...............................................................................................GCACGGAGAATAATAGTAATC....................................................................................................................................... 21 0 3 1.67 5 5 0 0 0 0 0 0 0 0
.......................GTTGACGAAGAGTGTTACCTG............................................................................................................................................................................................................... 21 0 3 1.67 5 5 0 0 0 0 0 0 0 0
....................................................................................CGAGACGGCAGGCACGGAGA................................................................................................................................................... 20 0 3 1.67 5 4 1 0 0 0 0 0 0 0
............ATGTGGTTTCGGTTGACGA............................................................................................................................................................................................................................ 19 0 3 1.67 5 5 0 0 0 0 0 0 0 0
.......................................................................................................................................................................GAGACGCTGACAGATACGGGT............................................................... 21 0 3 1.67 5 4 1 0 0 0 0 0 0 0
.....................................................................TATTGGTATGATAGCCGAGAC................................................................................................................................................................. 21 0 3 1.67 5 0 5 0 0 0 0 0 0 0
....................................................................................................................................................................................ATACGGGTAGGTGTAGTCTA................................................... 20 0 3 1.67 5 2 2 0 0 0 1 0 0 0
...................................................................................CCGAGACGGCAGGCACGGAG.................................................................................................................................................... 20 0 3 1.67 5 5 0 0 0 0 0 0 0 0
GGTTTCTTAGGGATGTGGT........................................................................................................................................................................................................................................ 19 0 3 1.67 5 4 0 1 0 0 0 0 0 0
.....CTTAGGGATGTGGTTTCGGT.................................................................................................................................................................................................................................. 20 0 3 1.67 5 3 0 2 0 0 0 0 0 0
......................GGTTGACGAAGAGTGTTACC................................................................................................................................................................................................................. 20 0 3 1.67 5 5 0 0 0 0 0 0 0 0
.........................................................................................CGGCAGGCACGGAGAATAATA............................................................................................................................................. 21 0 3 1.67 5 4 1 0 0 0 0 0 0 0
......TTAGGGATGTGGTTTCGGTT................................................................................................................................................................................................................................. 20 0 3 1.67 5 5 0 0 0 0 0 0 0 0
....................................................................................CGAGACGGCAGGCACGGAGGG.................................................................................................................................................. 21 2 3 1.33 4 4 0 0 0 0 0 0 0 0
.....CTTAGGGATGTGGTTTCGGTT................................................................................................................................................................................................................................. 21 0 3 1.33 4 4 0 0 0 0 0 0 0 0
.........GGGATGTGGTTTCGGTTGA............................................................................................................................................................................................................................... 19 0 3 1.33 4 3 1 0 0 0 0 0 0 0
.................................................................................................................................................................................CAGATACGGGTAGGTGTAGTC..................................................... 21 0 3 1.33 4 1 3 0 0 0 0 0 0 0
.............TGTGGTTTCGGTTGACGGAGA......................................................................................................................................................................................................................... 21 1 3 1.33 4 4 0 0 0 0 0 0 0 0
..TTTCTTAGGGATGTGGTTTC..................................................................................................................................................................................................................................... 20 0 3 1.33 4 2 1 1 0 0 0 0 0 0
.........................TGACGAAGAGTGTTACCTGTA............................................................................................................................................................................................................. 21 0 3 1.33 4 4 0 0 0 0 0 0 0 0
.....................CGGTTGACGAAGAGTGTTACC................................................................................................................................................................................................................. 21 0 3 1.00 3 2 1 0 0 0 0 0 0 0
.........GGGGTGTGGTTTCGGTTGA............................................................................................................................................................................................................................... 19 1 3 1.00 3 1 2 0 0 0 0 0 0 0
.......TAGGGATGTGGTTTCGGTTGA............................................................................................................................................................................................................................... 21 0 3 1.00 3 2 1 0 0 0 0 0 0 0
..................................................................................................CGGAGAATAATAGTAATCAGT.................................................................................................................................... 21 0 3 1.00 3 2 0 1 0 0 0 0 0 0
...........GATGTGGTTTCGGTTGACG............................................................................................................................................................................................................................. 19 0 3 1.00 3 3 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AGATACGGGTAGGTGTAGT...................................................... 19 0 3 1.00 3 2 1 0 0 0 0 0 0 0
.......TAGGGGTGTGGTTTCGGTTG................................................................................................................................................................................................................................ 20 1 3 1.00 3 3 0 0 0 0 0 0 0 0
........AGGGATGTGGTTTCGGTT................................................................................................................................................................................................................................. 18 0 3 1.00 3 3 0 0 0 0 0 0 0 0
..............GTGGTTTCGGTTGACGAAGA......................................................................................................................................................................................................................... 20 0 3 1.00 3 3 0 0 0 0 0 0 0 0
................................................................................................CACGGAGAATAATAGTAATCA...................................................................................................................................... 21 0 3 1.00 3 1 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................TGTAGTCTGCACAGATCGTGC....................................... 21 1 3 1.00 3 3 0 0 0 0 0 0 0 0
................GGTTTCGGTTGACGAAGAGT....................................................................................................................................................................................................................... 20 0 3 1.00 3 3 0 0 0 0 0 0 0 0
..........................................................................................GGCAGGCACGGAGAATAATA............................................................................................................................................. 20 0 3 1.00 3 1 0 2 0 0 0 0 0 0
...........................................................................................GCAGGCACGGAGAATAATAGT........................................................................................................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CTGACAGATACGGGTAGGTGT......................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0 0
..........................GACGAAGAGTGTTACCTGTA............................................................................................................................................................................................................. 20 0 3 1.00 3 3 0 0 0 0 0 0 0 0
.........TGGATGTGGTTTCGGTTGAC.............................................................................................................................................................................................................................. 20 1 3 1.00 3 2 1 0 0 0 0 0 0 0
.............................................................................................AGGCACGGAGAATAATAGTAA......................................................................................................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................TACACAGATCGTGCACAACAT................................ 21 0 3 1.00 3 3 0 0 0 0 0 0 0 0
.........GGGATGTGGTTTCGGTTG................................................................................................................................................................................................................................ 18 0 3 1.00 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GGTGTAGTCTACACAGATCGT......................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GGGTAGGTGTAGTCTACACAG.............................................. 21 0 3 1.00 3 3 0 0 0 0 0 0 0 0
........................................................................................ACGGCAGGCACGGAGAATAAT.............................................................................................................................................. 21 0 3 1.00 3 2 0 1 0 0 0 0 0 0
.............................GAAGAGTGTTACCTGTAAGAC......................................................................................................................................................................................................... 21 0 3 1.00 3 1 2 0 0 0 0 0 0 0
.......................................................................................................................................................................................CGGGTAGGTGTAGTCTACACA............................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0 0
.................................................................................AGCCGAGACGGCAGGCACGGA..................................................................................................................................................... 21 0 3 1.00 3 3 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGCACAACATGGTATAACATC..................... 21 0 3 1.00 3 0 2 0 1 0 0 0 0 0
.....................................................................................GAGACGGCAGGCACGGAGGG.................................................................................................................................................. 20 2 4 0.75 3 2 1 0 0 0 0 0 0 0
...............................................................................................................TAATCAGTACACGTGTAATAA....................................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
................................................................................................................................................................................ACAGATACGGGTAGGTGTAGT...................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
GGTTTCTTAGGGGTGTGGT........................................................................................................................................................................................................................................ 19 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................GCTGACAGATACGGGTAGGT........................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.......................................................................................GACGGCAGGCACGGAGAATA................................................................................................................................................ 20 0 3 0.67 2 1 1 0 0 0 0 0 0 0
...........................................................................................TCAGGCACGGAGAATAATAGT........................................................................................................................................... 21 1 3 0.67 2 2 0 0 0 0 0 0 0 0
........................................................................................................ATAATAGTGGTCAGTACACGT.............................................................................................................................. 21 2 3 0.67 2 2 0 0 0 0 0 0 0 0
..........GGATGTGGTTTCGGTTGACGG............................................................................................................................................................................................................................ 21 1 3 0.67 2 1 1 0 0 0 0 0 0 0
.....................................................................................GAGACGGCAGGCACGGAGA................................................................................................................................................... 19 0 3 0.67 2 1 1 0 0 0 0 0 0 0
........................TTGACGAAGAGTGTTACCTGT.............................................................................................................................................................................................................. 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
........TGGGATGTGGTTTCGGTTGA............................................................................................................................................................................................................................... 20 1 3 0.67 2 2 0 0 0 0 0 0 0 0
...................................................................................................GGAGAATAATAGTAATCAGTA................................................................................................................................... 21 0 3 0.67 2 1 0 1 0 0 0 0 0 0
..................................GTGTTACCTGTAAGACCATTC.................................................................................................................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ACGGGTAGGTGTAGTCTACGC................................................ 21 1 3 0.67 2 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................CAGATACGGGTAGGTGTAGT...................................................... 20 0 3 0.67 2 1 1 0 0 0 0 0 0 0
....................TCGGTTGACGAAGAGTGTTA................................................................................................................................................................................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.......................................................TGAAATAGTATTAGTATTGGTA.............................................................................................................................................................................. 22 1 3 0.67 2 0 2 0 0 0 0 0 0 0
.........................TGACGAAGAGTGTTACCTGT.............................................................................................................................................................................................................. 20 0 3 0.67 2 2 0 0 0 0 0 0 0 0
..............................GAGAGTGTTACCTGTAAGACC........................................................................................................................................................................................................ 21 1 3 0.67 2 2 0 0 0 0 0 0 0 0
......TTAGGGATGTGGTTTCGGT.................................................................................................................................................................................................................................. 19 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.....................................................................................GAGACGGCAGGCACGGAGAA.................................................................................................................................................. 20 0 3 0.67 2 1 0 1 0 0 0 0 0 0
.................GTTTCGGTTGACGGAGAGTGT..................................................................................................................................................................................................................... 21 1 3 0.67 2 1 1 0 0 0 0 0 0 0
............................CGAAGAGTGTTACCTGTAAG........................................................................................................................................................................................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0 0
GGTTTCTTAGGGGTGTGGTT....................................................................................................................................................................................................................................... 20 1 3 0.67 2 2 0 0 0 0 0 0 0 0
...................................................................................CCGAGACGGCAGGCACGGAGA................................................................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GTGCACAACATGGTATAAC........................ 19 0 3 0.67 2 2 0 0 0 0 0 0 0 0
....TCTTAGGGGTGTGGTTTCGGTT................................................................................................................................................................................................................................. 22 1 3 0.67 2 2 0 0 0 0 0 0 0 0
..............GTGGTTTCGGTTGACGGAGA......................................................................................................................................................................................................................... 20 1 3 0.67 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................ACACAGATCGTGCACAACATG............................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCACAACATGGTATGACGTCACT.................. 23 2 3 0.67 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GACGCTGACAGATACGGGTA.............................................................. 20 0 3 0.67 2 0 0 2 0 0 0 0 0 0
.......TAGGGATGTGGTTTCGGT.................................................................................................................................................................................................................................. 18 0 3 0.67 2 2 0 0 0 0 0 0 0 0
..................................GTGTTACCTGTGAGACCGTTC.................................................................................................................................................................................................... 21 2 3 0.67 2 2 0 0 0 0 0 0 0 0
........................................................................................................................CACGTGTAATAAATGCCATTT.............................................................................................................. 21 0 3 0.67 2 1 0 0 0 0 0 1 0 0
.......TAGGGATGTGGTTTCGGTT................................................................................................................................................................................................................................. 19 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.....................................................................................GAGACGGCAGGCACGGAGGA.................................................................................................................................................. 20 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............ATGTGGTTTCGGTTGACGG............................................................................................................................................................................................................................ 19 1 3 0.67 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................................................ATACGGGTAGGTGTAGTCTAC.................................................. 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.GTTTCTTAGGGGTGTGGTTTC..................................................................................................................................................................................................................................... 21 1 3 0.67 2 2 0 0 0 0 0 0 0 0
..................................................................TAGTATTGGTGTGATAGCCG..................................................................................................................................................................... 20 1 3 0.67 2 2 0 0 0 0 0 0 0 0
....................................................TTCAGAAATAGTATTAGTATT.................................................................................................................................................................................. 21 0 3 0.67 2 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................TGACAGATACGGGTAGGTGTA........................................................ 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.......................................................................................GACGGCAGGCACGGAGGGTA................................................................................................................................................ 20 2 4 0.50 2 1 1 0 0 0 0 0 0 0
.....................CGGTTGACGGAGGGTGTTAC.................................................................................................................................................................................................................. 20 2 4 0.50 2 2 0 0 0 0 0 0 0 0
..............................................................................................GGCACGGAGAATAATAGTA.......................................................................................................................................... 19 0 3 0.33 1 0 0 1 0 0 0 0 0 0
..........................................................................................GGCAGGCACGGAGGGTAAT.............................................................................................................................................. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................AGAGACGCTGACAGATGCGG................................................................. 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..........................................TGTAAGACCATTCAGGAATA............................................................................................................................................................................................. 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
............ATGTGGTTTCGGTTGACGAAG.......................................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................TTCGGTTGACGGAGAGTGTTA................................................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
TTTTTCTTAGGGATGTGGT........................................................................................................................................................................................................................................ 19 2 6 0.33 2 0 0 2 0 0 0 0 0 0
...................TTCGGTTGACGGAGAGTGTT.................................................................................................................................................................................................................... 20 1 3 0.33 1 0 1 0 0 0 0 0 0 0
..............................................................................................GGCACGGAGGATGATAGTAAT........................................................................................................................................ 21 2 3 0.33 1 0 1 0 0 0 0 0 0 0
.............TGTGGTTTCGGTTGACGA............................................................................................................................................................................................................................ 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...TTCTTAGGGATGTGGTTTCG.................................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GATCGTGCACAACATGGTATA.......................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GGGTAGGTGTAGTCTACAC................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGTGCACAACATGGTATAACA....................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
....TCTTAGGGGTGGGGTTTCGGT.................................................................................................................................................................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................TAGGTGTAGTCTACACAGATC........................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................................................TTGAGACGGCAGGCACGGA..................................................................................................................................................... 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0
......................................................................................AGACGGCAGGCACGGAGAATA................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................................................................................GGCACGGAGAATAATAGTAA......................................................................................................................................... 20 0 3 0.33 1 0 0 1 0 0 0 0 0 0
..............................AAGAGTGTTACCTGTAAGAC......................................................................................................................................................................................................... 20 0 3 0.33 1 0 0 0 1 0 0 0 0 0
.GTTTCTTAGGGATGTGGT........................................................................................................................................................................................................................................ 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................CGGCAGGCACGGAGAGTGATA............................................................................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................................................GGCGGCAGGCACGGAGAATA................................................................................................................................................ 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GGTAGGTGTAGTCTACACAGA............................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................GTAAGACCATTCAGAAGTAGT........................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CTGACAGGTACGGGTAGGTG.......................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................................AGACCATTCAGGGATAGTATTA....................................................................................................................................................................................... 22 2 3 0.33 1 0 0 0 0 1 0 0 0 0
.........................TGACGAAGAGTGTTGCCTGTG............................................................................................................................................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
........AGGGATGTGGTTTCGGTTGACG............................................................................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................GTGTTACCTGTAAGACCGTTC.................................................................................................................................................................................................... 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................ACAACAGAGACGCTGACAGAT..................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................TGGCAGGCACGGAGAATAGTA............................................................................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................CAACAGAGACGCTGACAGAT..................................................................... 20 0 3 0.33 1 0 0 0 0 0 1 0 0 0
....................TTGGTTGACGAAGAGTGTTA................................................................................................................................................................................................................... 20 1 3 0.33 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGTAGTCTACACAGGTCGTGC....................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ACGGGTAGGTGTAGTCTACAC................................................ 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................AGATACGGGTAGGTGTAGTCT.................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0
..........................................................................................GGCAGGCACGGAGAATAAT.............................................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................TTTCGGTTGACGAAGAGTGT..................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.....TTTAGGGATGTGGTTTCGGTT................................................................................................................................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TACACGTGTAATAAATGCCAT................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................AAGAGTGTTACCTGTAAGA.......................................................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................CGGCAGGCACGGAGAATGGT.............................................................................................................................................. 20 2 3 0.33 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................GTAGGTGTAGTCTACACAGGT............................................ 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................GTGCACAACATGGTATAACAT...................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................TTTCGGTTGGCGAAGAGTGTT.................................................................................................................................................................................................................... 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0
..........GGGTGTGGTTTCGGTTGACG............................................................................................................................................................................................................................. 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................TAGTATTAGTGTTGGTATGGT.......................................................................................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................ACGAAGAGTGTTACCTGTA............................................................................................................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................CGGGTAGGTGTAGTCTACA................................................. 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................TGATACGGGTAGGTGTAGT...................................................... 19 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................ACGAAGAGTGTTACCTGTAA............................................................................................................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................GTAAGACCATTCAGAAATAG............................................................................................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................CGTGCACAACGTGGTATAAC........................ 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........AATGTGGTTTCGGTTGACGAA........................................................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................TGTATGAAAAAAAGAAAAACA....................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GACGCTGACAGATACGGGTAG............................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..........GGGTGTGGTTTCGGTTGAC.............................................................................................................................................................................................................................. 19 1 3 0.33 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................ATGCGCGACATGGTATAACATC..................... 22 3 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................GTGTTACCTGTGAGGCCATTC.................................................................................................................................................................................................... 21 2 3 0.33 1 0 1 0 0 0 0 0 0 0
..............GTGGTTTCGGTTGACGGAGAG........................................................................................................................................................................................................................ 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................ATTCAGAAATAGTATTAGTAT................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................GTGTTACCTGTAAGACCATT..................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................AGACGGCAGGCACGGAGGATA................................................................................................................................................ 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................AGAGACGCTGGCGGATACGGG................................................................ 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................AAGAGTGTTACCTGTAAGACC........................................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................TTCGGTTGGCGGAGAGTGTT.................................................................................................................................................................................................................... 20 2 3 0.33 1 0 1 0 0 0 0 0 0 0
................GGTTTCGGTTGACGGAGGGTG...................................................................................................................................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................................GTCAGTACACGTGTAATAAAT..................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..........TGATGTGGTTTCGGTTGACGA............................................................................................................................................................................................................................ 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0
...........GATGTGGTTTCGGTTGACGG............................................................................................................................................................................................................................ 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................GTGAGACCATTCAGAAATAGT........................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................ATTCAGAAATAGTATTAGTATT.................................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................................................................................GAGACGGCAGGCACGGAGAAT................................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................GTTGACGAAGAGTGTTACCT................................................................................................................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..........................................................................................GGCAGGCACGGAGAATAATAG............................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CACTATATCACACATATACAT. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................AGACGGCAGGCACGGAGAATAC............................................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0
................GGTTTCGGTTGGCGGAGAGTG...................................................................................................................................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
...TTCTTAGGGGTGTGGTTTCGGT.................................................................................................................................................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................GGTTGACGAAGAGTGTTAC.................................................................................................................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.........GGGATGTGGTTTCGGTTGACG............................................................................................................................................................................................................................. 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0
...................TTCGGTTGACGAAGAGTGTTAC.................................................................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..........AGATGTGGTTTCGGTTGAC.............................................................................................................................................................................................................................. 19 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................AGATACGGGTAGGTGTAGTC..................................................... 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0
.................................................................................................ACGGGGAATAATAGTGATCAGT.................................................................................................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................GTTACCTGTAAGACCATTCA................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..TTTCTTAGGGATGTGGTTT...................................................................................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.......TAGGGATGTGGTTTCGGTTGAC.............................................................................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................................................ATAGCCGAGACGGCAGGCACG....................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................CCCGAGACGGCAGGCACGGA..................................................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................GTATTGGTATGATAGCCGAGA.................................................................................................................................................................. 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0
....................................................................................TGAGACGGCAGGCACGGAGA................................................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CATCACTATATCACACATATA.... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ACGGGTAGGTGTAGTCTAC.................................................. 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CTGACAGATACGGGTAGGTG.......................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................GGTTGGCGGAGAGTGTTAC.................................................................................................................................................................................................................. 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0
........AGGGATGTGGTTTCGGTTC................................................................................................................................................................................................................................ 19 1 3 0.33 1 0 1 0 0 0 0 0 0 0
................................................................................................................AATCAGTACACGTGTAATAAA...................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
................................GAGTGTTACCTGTAAGACCAT...................................................................................................................................................................................................... 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0
...................................................................................CCGAGGCGGCAGGCACGGAGG................................................................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..........GGATGTGGTTTCGATTGACGG............................................................................................................................................................................................................................ 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................................................................................GGCACGGAGAATGATAGTAAT........................................................................................................................................ 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................GTTGACGGAGAGTGTTACCTGT.............................................................................................................................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................TAGATACGGGTAGGTGTAGT...................................................... 20 1 3 0.33 1 0 1 0 0 0 0 0 0 0
.......................GTTGGCGAAGAGTGTTACCTG............................................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................GACCATTCAGAGATAGTATT........................................................................................................................................................................................ 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................GGGTAGGTGTAGTCTACGC................................................ 19 1 3 0.33 1 1 0 0 0 0 0 0 0 0
................................................................................TAGCCGAGACGGCAGGCACGGAG.................................................................................................................................................... 23 0 3 0.33 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................AACGGGTAGGTGTAGTCTGCAC................................................ 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0
............................CGAAGAGTGTTACCTGTAAGAC......................................................................................................................................................................................................... 22 0 3 0.33 1 0 0 0 0 0 0 1 0 0
....................................................................................CGAGACGGCAGGCACGGAGG................................................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
....................TCGGTTGACGGAGAGTGTT.................................................................................................................................................................................................................... 19 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................AAGATACGGGTAGGTGTAGT...................................................... 20 1 3 0.33 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................TACGGGTAGGTGTAGTCTA................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................TGGTTGACGAAGAGTGTTACCTG............................................................................................................................................................................................................... 23 1 3 0.33 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................GATACGGGTAGGTGTAGTCT.................................................... 20 0 3 0.33 1 0 0 1 0 0 0 0 0 0
...TTCTTAGGGATGTGGTTTCGGG.................................................................................................................................................................................................................................. 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.............TGTGGTTTCGGTTGACGAAG.......................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................AGACGCTGACAGATACGGGTA.............................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
GGTTTCTTAGGGATGTGGTTTG..................................................................................................................................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0
................GGTTTCGGTTGACGGAGAGTG...................................................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..............GTGGTTTCGGTTGACGAAGAG........................................................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................GGTAGGTGTAGTCTACACAG.............................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................TGTAGTCTACGCAGATCGTTC....................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................GGTACGGGTAGGTGTAGTC..................................................... 19 1 3 0.33 1 0 1 0 0 0 0 0 0 0
............................................................................................CAGGCACGGAGAATAATAGTA.......................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................AGAAATAGTATTAGTATTGGT............................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................TCACTATATCACACATATACA.. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................................................................GGAGGGTAATAGTAATCAGTACACGT.............................................................................................................................. 26 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................AGGCACGGAGAATAATAGTA.......................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ACGGGTAGGTGTAGTCTACG................................................. 20 1 3 0.33 1 0 0 0 1 0 0 0 0 0
.....CTTAGGGGTGTGGTTTCGGT.................................................................................................................................................................................................................................. 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................................................................GCACGGAGAATAATAGTGGTC....................................................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..........................................................................GTATGATAGCCGAGACGGCAG............................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................TGCACAACGTGGTATGACATC..................... 21 2 3 0.33 1 0 1 0 0 0 0 0 0 0
.....................................................TCAGAAATAGTATTAGTATT.................................................................................................................................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................CATTCAGAAATAGTATTAGTA.................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................AGAAATAGTATTAGTCTTGGT............................................................................................................................................................................... 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0
................GGTTTCGGTTGACGAAGAGTGT..................................................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................ACGTGTAATAAATGCCGTTT.............................................................................................................. 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........GATGTGGTTTCGGTTGGCGGA........................................................................................................................................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................CGAGACGGCAGGCACGGA..................................................................................................................................................... 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................................................GACGGCAGGCACGGAGAATG................................................................................................................................................ 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................................................CCGAGACGGCAGGCACGGAGGATA................................................................................................................................................ 24 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................AGGCGGCAGGCACGGAGGATA................................................................................................................................................ 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................TGTTACCTGTAAGACCGTTCA................................................................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................CGGTTGACGGGGAGTGTTACC................................................................................................................................................................................................................. 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................AAGAGTGTTACCTGTAAGACCAT...................................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................ATTGGTATGATAGCCGAGACG................................................................................................................................................................ 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0
............................................................................................CAGGCACGGAGAATAATAGT........................................................................................................................................... 20 0 3 0.33 1 0 0 0 0 1 0 0 0 0
.....................CGGTTGACGGAGAGTGTTACC................................................................................................................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................ATAGTGGTCAGTACACGTGTA........................................................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................GCAGGCACGGAGGGTAATAG............................................................................................................................................ 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..........................................................................................GGCAGGCACGGAGGATAAT.............................................................................................................................................. 19 1 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................................................ACGGCAGGCACGGAGAATA................................................................................................................................................ 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................GCCGAGACGGCAGGCACGGA..................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................CGGTTGACGAAGAGTGTTACCT................................................................................................................................................................................................................ 22 0 3 0.33 1 0 0 0 1 0 0 0 0 0
...........................................................................................GCAGGCACGGAGAATGGTAG............................................................................................................................................ 20 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................GCCGAGACGGCAGGCACGGAGAA.................................................................................................................................................. 23 0 3 0.33 1 0 0 0 0 0 0 0 0 1
.........................................................AAATAGTATTAGTATTGGTAT............................................................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.................GTTTCGGTTGACGAAGAGTG...................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..........................................................................................GGCAGGCACGGAGGATAATA............................................................................................................................................. 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................................ATCAGTACACGTGTAATAAA...................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................................................TCGAGACGGCAGGCACGGA..................................................................................................................................................... 19 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..TTTCTTAGGGGTGTGGTTTCG.................................................................................................................................................................................................................................... 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................GCTGACAGATACGGGTAGGTG.......................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................GTGTTACCTGTAAGACCAT...................................................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...............................................................................GTAGCCGAGACGGCAGGCACG....................................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.........TGGATGTGGTTTCGGTTGACGA............................................................................................................................................................................................................................ 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0
....TCTTAGGGGTGTGGTTTCGG................................................................................................................................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................ACGGAGGGTAATAGTAATCAGTACACGT.............................................................................................................................. 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................CGGATACGGGTAGGTGTAGT...................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................................................GACGGCAGGCACGGAGGATAA............................................................................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 2:1827540-1827790 + dps_304 CCAAAGAATCCCTACACCAAAGCCAACTGCTTCTCACAATGGACATTCTGGTAAGTCTT-----------------TATCATAATCATA--------------------------------------ACCATACTATCG--GCTCTG---------------------CCGTCCGTGCCTCTTA-----------------TTATCATTAGTCATG------------TGCAC-ATTATTTACGGTAAATTACATACTTTTTTTCTTTTTGTTGTCT-CTGCGACTGTCTATGCCCATCCACATCAGATGTGTCTAGCACGTGTTG-TACCATATTGTAGTG----------ATATAGTGTGTATATG-TAC
droPer2 scaffold_7:1991089-1991340 + CCAAAGAATCCCTACACCAAAGCCAACTGCTTCTCACAATGGACATTCTGGTAAGTCTT-----------------TATCATAATCATA--------------------------------------ACCATACTATCG--GCTCTG---------------------CCGTCCCCGCCTCTTA-----------------TTATCATTAGTCATG------------TGCAC-ATTATTTACGGTAAATTACATACTTTTTTTCTTTTTGTTGTCTACTGCGACTGTCTATGCCTATCCACATCAGATGTGTCTAGCACGTGTTG-TACCATATTGTAGTG----------ATATAGTATGTATGTA-TAT
droWil2 scf2_1100000004921:1675207-1675354 + CCAAAGAATCCTTACACAGAAGCAAATGCCTTCTCACATTGGACTTTCTGGTAAGCAA-------------------------------------------------------GAAAACAACA-AAAA--AT-----C---------------------------CCC----------------CCACACCCGCTACAAGTTTAGCATTAGTCATACGTAGACAAACTCACAT-ATTATTTACGGTAAATTAAAT---------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12822:2250577-2250632 + CCAAAAAATCCCTACACAAATGCAAATCTATTCTCACAATGGAGTTTCTGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:26385551-26385606 + CCAAAAAATCTTTACTCAAGTGCAAATGTATTTTCACGATGGACCTTTTGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13340:14257350-14257405 - CCAAAGAATCCCTACACCAAGGCGAATATCTTCTCACAATGGAGCTTCTGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395971:907208-907312 + CCAAAGAATCCCTACACCAAGGCGAATATCTTCTCACAATGGAGCTTCTGGTAAGTATC----------CTTG---GATCCGAACAATA--------------------------------------ACC------------------------------------------------------------------------------------------------------C-TCTGTTCTCTATGAATTATAT------------------------------------------------------------------------------------------------TTTC-----------------
droKik1 scf7180000302466:496288-496472 - CCCAAGAATCCCTACACCGAGGCCAGCTTCTTCTCACAATGGAGCTTCTGGTGAGTGTC--------------------------------CCCAAAAAC-----------------------------C-------CCCA------GTG---------------CTCCCGAACCCTC--CCTA-----------------TTTGCGTTAGTCATG------------AGCCCCATTATTTACGGTAAATTATATA----------GT-----------T-------------------------------TTGTAGCACGTGCTCAGACCATATTG-AGCGAGCAAGTAGTATCAG--------------T
droFic1 scf7180000453776:279522-279729 + CCAAAGAACCCATACACCAAAGCTAGCTACTTCTCACAATGGACCTTCTGGTAAGTGTT--------------------------------ACGAAAAA--------------------------------T-----C---------GTGTTATAGAAATCGGAATAG----------------CCATACATATAGTCACT----CATTAGTCATG------------AGCAAATTTTTTTACGGTAAATCACAC----------CTT-----------ACAG----------------------AGTTCAATGTAGCACGTGTTCTGACCATATTGTA-----------GTATCAGGTCTTTATCAGGTTC
droEle1 scf7180000491280:1166871-1166926 + CCAAAGAATCCCTACACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779516:29450-29633 - CCAAAGAATCCCTACACCAAGGCCAACTTCTTCTCACAATGGAGTTTCTGGTAAGTTTGCTGACATTATACCCCTTTATAGGAAA-AGGAATGCG--------------------------------A------------------------------------ATAG----------------CCAGA----------------CATTACATACG------------AGCAC-ATTATTTACGGTAAATTATAT----------CTT-----------TGCG----------------------GTTTCCAAATAGCACGTGTTTTGACCATATTGTA-----------GT--------------------
droBia1 scf7180000302136:3158972-3159157 - CCAAAGAATCCCTACACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGTGTA--------------------------------CCCGAAGAG-------------------------------C---------------------------------CGG----------------CCAGACATGGAGTCATTC----CTTAGTCATG------------GGCCC-ATTATTTACGGTAAATTATATG----TGTACCCT-----------G-------------------------------CTGTAGCACGTGTTCCTACCATATTGTA-----------GTATCAGGTTCTTATTGGGTTC
droTak1 scf7180000415310:240221-240403 + CCAAAGAATCCCTATACCAAAGCAAACTTCTTCTCACAATGGAGCTTTTGGTAAGTTAC----------ACC----------AATTACG--------------------------------------A------------------------------------ACAT----------------CCAGAC--GTAGTCACTTTTCCATTAGTCATG------------AGCAC-ATTATTTACGGTAAATCGTATA----TGTTCCTC-----------T-------------------------------ATGTAGCACGTGTTCTTACCATATTGTA-----------GTATCAGGTTTTTAT-------
droEug1 scf7180000409787:590237-590434 - CCAAAGAATCCATACACCAAAGCCAATTTCTTCTCACAATGGAGCTTCTGGTGAGTTTT-----------------TCCCTTGAAATGT--------------------------------------ACCTTAA--------------------------------AG----------------CCAGACATGCAGTCACTCCTCCATTAGTCATG------------AGAAC-ATTATTTACGGTAAATCATAC--TTTTGTACCTT-----------G---------------------------GTGCAGCTAGCACGTGTTCTTAACATATTGTA-----------GTATCAGGTTTTTAT-------
dm3 chr3R:24984363-24984578 + CCAAAGAATCCCTTCACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGTTTA--------------------------------ACTACAAACGTGTGGATATGTAGAATTAATCA-A--AACATGAAA------------------------------------------------ACAGACTTGGAGTCACTCCTGTATTAGTCATG------------AGAAT-ATCACTTACGGTAAATCAAAT------GTACTAT-----------T-------------------------------CTGTAGCACGTGTTCTCACCATATTGTA-----------GTATCAGGTTCGTATCAGG-GC
droSim2 3r:24344148-24344363 + CCAAAGAATCCCTTCACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGCTTA--------------------------------ACCACAAACGTGTGCATGTGTAGAATTAATGA-A--AACATGAAA------------------------------------------------ACAGACTTGGAGTCACTCCTTTATTAGTCATG------------AGAAT-ACCACTTACGGTAAATCAAAT------GTACTAT-----------T-------------------------------CTGTAGCACGTGTTCTCACCATATTGTA-----------GTATCAGGTTTATATCAGG-GC
droSec2 scaffold_4:3848850-3848925 + CCAAAGAATCCCTTCACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGTTTA--------------------------------ACCACAAACGTGTGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3R:21513648-21513867 - CCAAAGAATCCCTACACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGTTCA--------------------------------CCC---AACTTGTGCATATGAAGAAAATATCAGA--AACATCAGA---------------------AA-CAGAACTT----------------CCAGACTTGGAGTCACTCCTTCATTAGTCACG--------------CAC-AGAACTTACGGTAAATCAGAT------GTACCTT-----------T-------------------------------CAGTAGCACGTGTTCTCACCATATTGTA-----------GTATCAGGTTT--ACTTA-TAT
droEre2 scaffold_4820:3047063-3047230 - CCAAAGAATCCTTTCACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGTTGT--------------------------------CCC---AACCTGTGCATGTTTAGAAAATATCA-GA-AA-------------------------------CAGAATTT----------------TCAGACTTGGAGTCACTCCTTCATTAGTCATG------------AGCAC-ATTATTTACGGTAAATCATAT------GTACCTT-----------T-------------------------------TT-----------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CCAAAGAATCCCTACACCAAAGCCAACTGCTTCTCACAATGGACATTCTGGTAAGTCTT-----------------TATCATAATCATA--------------------------------------ACCATACTATCG--GCTCTG---------------------CCGTCCGTGCCTCTTA-----------------TTATCATTAGTCATG------------TGCAC-ATTATTTACGGTAAATTACATACTTTTTTTCTTTTTGTTGTCT-CTGCGACTGTCTATGCCCATCCACATCAGATGTGTCTAGCACGTGTTG-TACCATATTGTAGTG----------ATATAGTGTGTATATG-TACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................AACTGCTTCTCACAATGGACA.......................................................................................................................................................................................................................................................................................................................................21312.673813500000020
..............................TTCTCACAATGGACATTCTGG.................................................................................................................................................................................................................................................................................................................................2138.332502500000000
.............................CTTCTCACAATGGACATTCTG..................................................................................................................................................................................................................................................................................................................................2135.331601300000030
.......................CAACTGCTTCTCACAATGGAC........................................................................................................................................................................................................................................................................................................................................2134.001201200000000
...............................TCTCACAATGGACATTCTGGT................................................................................................................................................................................................................................................................................................................................2133.67110800003000
...................................................................................ATCATA--------------------------------------ACCATACTATCG--GCT....................................................................................................................................................................................................................................2131.6750310000010
..................................................................................................................................................................................................................................................................TTTTTTCTTTTTGTTGTCT-CT............................................................................................2131.3340100002010
..................................................................................................................................................................................................................................................................................TCT-CTGCGACTGTCTATGCCC............................................................................2131.3340300000010
.........................................................................................................................................................................................................................................................................................CGACTGTCTATGCCCATCCAC......................................................................2131.3340400000000
.....................................................................................................................................................................................................................ATG------------TGCAC-ATTATTTACGGTA.............................................................................................................................2131.3340400000000
.....................................................................................................................................CTATCG--GCTCTG---------------------CCGTCCGTG...................................................................................................................................................................................................2131.3340300001000
...........................................................................................................................................................................................................................................................................................................................................ATATTGTAGTG----------ATATAGTGTG..........2131.3340200002000
...................................................................................................................................................................................................................................................................TTTTTCTTTTTGTTGTCT-CTG...........................................................................................2131.3340300000010
..AAAGAATCCCTACACCAAAGC.............................................................................................................................................................................................................................................................................................................................................................2131.3340400000000
..............................................................................................................................................CTCTG---------------------CCGTCCGTGCCTCTTA-----------------...........................................................................................................................................................................2131.3340300001000
...........................................................................................................................................................................................................................................................................................................CACATCAGATGTGTCTAGCAC....................................................2131.3340200000020
....................................................................................................................................ACTATCG--GCTCTG---------------------CCGTCCGT....................................................................................................................................................................................................2131.3340400000000
....AGAATCCCTACACCAAAGCCA...........................................................................................................................................................................................................................................................................................................................................................2131.0030300000000
.................................................................................................................................................................................................................................................................................................................................................TAGTG----------ATATAGTGTGTATATG-...2131.0030100001010
..............................TTCTCACAATGGACATTCTG..................................................................................................................................................................................................................................................................................................................................2031.0030300000000
......................................................................................................................................TATCG--GCTCTG---------------------CCGTCCGTGC..................................................................................................................................................................................................2131.0030300000000
....................................................................................................................................................................................................................................................................TTTTCTTTTTGTTGTCT-CTGC..........................................................................................2131.0030300000000
......................................................................................ATA--------------------------------------ACCATACTATCG--GCTCTG---------------------............................................................................................................................................................................................................2131.0030300000000
.........................ACTGCTTCTCACAATGGACA.......................................................................................................................................................................................................................................................................................................................................2031.0030300000000
.................................TCACAATGGACATTCTGGTAA..............................................................................................................................................................................................................................................................................................................................2131.0030200000010
.....................GCCAACTGCTTCTCACAATGG..........................................................................................................................................................................................................................................................................................................................................2131.0030300000000
............................................................................................................................................................................................................................................................................................................................................TATTGTAGTG----------ATATAGTGTGT.........2131.0030200001000
...........................................................................................................................................................................................................................................................................TTTGTTGTCT-CTGCGACTGTC...................................................................................2131.0030300000000
..AAAGAATCCCTACACCAAAG..............................................................................................................................................................................................................................................................................................................................................................2031.0030300000000
...............................................................................................................................................................................................................................................................................TTGTCT-CTGCGACTGTCTATG...............................................................................2131.0030300000000
............TACACCAAAGCCAACTGCTTC...................................................................................................................................................................................................................................................................................................................................................2131.0030200000010
..............................................................................................................................................................................................................................................................................................................................................TTGTAGTG----------ATATAGTGTGTAT.......2131.0030000003000
.............................................................................................................................................................................................................................................................................................................................CACGTGTTG-TACCATATTGTA.................................2131.0030300000000
.........................................................................................................................................................................................................TTATCATTAGTCATG------------TGCAC-A.........................................................................................................................................2131.0030300000000
.........................................................................................................................................................................................................................................................................................................................CTAGCACGTGTTG-TACCATAT.....................................2130.6720200000000
............................................................................................................................................................................................................................................................................................................................GCACGTGTTG-TACCATATTGT..................................2130.6720200000000
..................................................................................................................................................................................................................................................................................................................................GTTG-TACCATATTGTAGTG----------AT..................2130.6720110000000
..................................................................................................................................................................................................................................................................................................................GATGTGTCTAGCACGTGTTG-T............................................2130.6720100001000
.............................CTTCTCACAATGGACATTCTGG.................................................................................................................................................................................................................................................................................................................................2230.6720200000000
.............ACACCAAAGCCAACTGCTTCT..................................................................................................................................................................................................................................................................................................................................................2130.6720200000000
.........................................................................................................................................CG--GCTCTG---------------------CCGTCCGTGCCT................................................................................................................................................................................................2030.6720200000000
...............................................................................................................................................................................................................................................................................................................................CGTGTTG-TACCATATTGTAGT...............................2130.6720200000000
...........................................................................................................................................................................................................................................TTATTTACGGTAAATTACATA....................................................................................................................2130.6720200000000
............................................ATTCTGGTAAGTCTT-----------------TATCA...................................................................................................................................................................................................................................................................................................2030.6720200000000
....................................................................................................................................................................................................................................................................................................................TGTGTCTAGCACGTGTTG-TAC..........................................2130.6720000002000
....................................................................................................................................................................................................................................................................................T-CTGCGACTGTCTATGCCCAT..........................................................................2130.6720100000010
.................................................................................................................................................................................................................................................................................................................AGATGTGTCTAGCACGTGTTG-.............................................2130.6720200000000
.........................................................................................................................................................................................................................................................................................................................................CCATATTGTAGTG----------ATATAGTG............2130.6720100010000
.................................TCACAATGGACATTCTGGT................................................................................................................................................................................................................................................................................................................................1930.6720000001010
................................................................................................................................................................................................................................................................................TGTCT-CTGCGACTGTCTATG...............................................................................2030.6720200000000
......................................................................................................................................................................................................................................................................................CTGCGACTGTCTATGCCCATC.........................................................................2130.6720100000010
.........................ACTGCTTCTCACAATGGACAT......................................................................................................................................................................................................................................................................................................................................2130.6720200000000
.................................................................................................................................................................................................................................................................TTTTTTTCTTTTTGTTGTCT-C.............................................................................................2130.6720200000000
...................................................................................................................................................................................................................................................................................................................................TTG-TACCATATTGTAGTG----------ATA.................2130.6720100001000
.CAAAGAATCCCTACACCAAAG..............................................................................................................................................................................................................................................................................................................................................................2130.6720200000000
......................................................................................................................................................................................................................................................................TTCTTTTTGTTGTCT-CTGCGA........................................................................................2130.6720200000000
........................................................................................................................................................................................................................................................................CTTTTTGTTGTCT-CTGCGACT......................................................................................2130.6720200000000
.............................................................................................................................................................................................................................................................................TGTTGTCT-CTGCGACTGTCT..................................................................................2030.6720200000000
.....................................................................................CATA--------------------------------------ACCATACTATCG--GCTCT..................................................................................................................................................................................................................................2130.6720200000000
....................................CAATGGACATTCTGGTAAGTC...........................................................................................................................................................................................................................................................................................................................2130.6720200000000
.....................................................................................................................................................................................................................................................................TTTCTTTTTGTTGTCT-CTGCG.........................................................................................2130.6720100000010
..............................................................................................................................................................................................................................................................................................................................ACGTGTTG-TACCATATTGTAG................................2130.6720100000010
....................................................................................................................................................................................................................................................................................T-CTGCGACTGTCTATGCCCA...........................................................................2030.6720200000000
......................................................................................................................................................................................................................................................................................................CCATCCACATCAGATGTGTCT.........................................................2130.6720100001000
............................................................................................................................................................................................................................................................................TTGTTGTCT-CTGCGACTGTC...................................................................................2030.6720000001010
.......................................................................................................................................................................................................................................................................................TGCGACTGTCTATGCCCATCC........................................................................2130.6720200000000
...................................................................................................................................TACTATCG--GCTCTG---------------------CCGTCCG.....................................................................................................................................................................................................2130.6720200000000
...................................................................................................................................................................................................................................................................................CT-CTGCGACTGTCTATGCCCA...........................................................................2130.6720200000000
.......ATCCCTACACCAAAGCCAACT........................................................................................................................................................................................................................................................................................................................................................2130.6720200000000
...................................................................................ATCATA--------------------------------------ACCATACTATCG--G......................................................................................................................................................................................................................................1930.6720200000000
......................................................................................................................................................................................................................................................................................................................TGTCTAGCACGTGTTG-TACC.........................................2030.6720200000000
........................................................................................................................................................................................................................................................................................................................TCTAGCACGTGTTG-TACCATA......................................2130.6720000002000
........................AACTGCTTCTCACAATGGAC........................................................................................................................................................................................................................................................................................................................................2030.6720200000000
.......................CAACTGCTTCTCACAATGGACA.......................................................................................................................................................................................................................................................................................................................................2230.6720200000000
........................................................................................................................................TCG--GCTCTG---------------------CCGTCCGTGCC.................................................................................................................................................................................................2030.6720200000000
..................................................................................................................................................................................................................................................................................................................................................AGTG----------ATATAGTGTGTATATG-T..2130.3310100000000
......................CCAACTGCTTCTCACAATGGA.........................................................................................................................................................................................................................................................................................................................................2130.3310100000000
........................................................................................................................................................................................................................................................................................GCGACTGTCTATGCCCATCCA.......................................................................2130.3310100000000
.....................................................................................................................................................................................................................................................................................................................................G-TACCATATTGTAGTG----------ATAT................2030.3310100000000
......................................................................................................................................................................................................................................................AAATTACATACTTTTTTTCTT.........................................................................................................2130.3310100000000
..................................................................................................................................................................................................................................................................................................................................GTTG-TACCATATTGTAGTG----------A...................2030.3310100000000
............................................................................................................................................................................................................................................................................................................................................TATTGTAGTG----------ATATAGTGTG..........2030.3310100000000
..................................................................................................................................ATACTATCG--GCTCTG---------------------CCGTCC......................................................................................................................................................................................................2130.3310100000000
............................................ATTCTGGTAAGTCTT-----------------TATC....................................................................................................................................................................................................................................................................................................1930.3310100000000
..............................................................................................................................................CTCTG---------------------CCGTCCGTGCCTCTT.............................................................................................................................................................................................2030.3310100000000
......................................................................................................................................................................................................................................................................TTCTTTTTGTTGTCT-CTGCG.........................................................................................2030.3310100000000
........................................................................................A--------------------------------------ACCATACTATCG--GCTCTG---------------------CC..........................................................................................................................................................................................................2130.3310100000000
....................................................................................................................................................................................CTTA-----------------TTATCATTAGTCATG------------TG..............................................................................................................................................2130.3310100000000
............................................................................................................................................................................................................................................................................................CTGTCTATGCCCATCCACATC...................................................................2130.3310100000000
...................................................................................................................................................................................................................................................................................................................................TTG-TACCATATTGTAGTG----------ATT.................2130.3310100000000
...........................................................................................................................................................................TCCGTGCCTCTTA-----------------TTATCATT...................................................................................................................................................................2130.3310100000000
..............CACCAAAGCCAACTGCTTCTCA................................................................................................................................................................................................................................................................................................................................................2230.3310100000000
...................................................................................................................................................................................................................................................................................CT-CTGCGACTGTCTATGCCC............................................................................2030.3310100000000
..............CACCAAAGCCAACTGCTTCTC.................................................................................................................................................................................................................................................................................................................................................2130.3310100000000
..........................CTGCTTCTCACAATGGACATTCT...................................................................................................................................................................................................................................................................................................................................2330.3310100000000
..................................................................................AATCATA--------------------------------------ACCATACTATCG--GC.....................................................................................................................................................................................................................................2130.3310100000000
......................................................................................................................................................................................................................................................................................CTGCGACTGTCTATGCCCAT..........................................................................2030.3310100000000
.............................................................................................................................................................................................................................................................................TGTTGTCT-CTGCGACTGTCTA.................................................................................2130.3310100000000
.......................................................................................................................................................................................................................................................................TCTTTTTGTTGTCT-CTGCGA........................................................................................2030.3310100000000
.......................CAACTGCTTCTCACAATGGA.........................................................................................................................................................................................................................................................................................................................................2030.3310100000000
...................................................................................ATCATA--------------------------------------ACCATACTATCG--GCTC...................................................................................................................................................................................................................................2230.3310100000000
..............................................................................................................................................................................................................................................................................................GTCTATGCCCATCCACATCAG.................................................................2130.3310100000000
................CCAAAGCCAACTGCTTCTCACC..............................................................................................................................................................................................................................................................................................................................................2230.3310010000000
.................................................................................................................................................................................................................................................................................................TATGCCCATCCACATCAGAT...............................................................2030.3310100000000
........................................................................................................................................TCG--GCTCTG---------------------CCGTCCGTGCCTC...............................................................................................................................................................................................2230.3310100000000
...................................................................................................................................TACTATCG--GCTCTG---------------------CCGTC.......................................................................................................................................................................................................1930.3310100000000
........................................................................................................................................TCG--GCTCTG---------------------CCGTCCGTGC..................................................................................................................................................................................................1930.3310100000000
..............................................................................................................................................................................................................................................................................GTTGTCT-CTGCGACTGTCTATG...............................................................................2230.3310100000000
...........................TGCTTCTCACAATGGACA.......................................................................................................................................................................................................................................................................................................................................1830.3310100000000
..................AAAGCCAACTGCTTCTCA................................................................................................................................................................................................................................................................................................................................................1830.3310100000000
.....................................................................................................................................................................................................................................................................................................................GTGTCTAGCACGTGTTG-TAC..........................................2030.3310100000000
.............................CTTCTCACAATGGACATT.....................................................................................................................................................................................................................................................................................................................................1830.3310100000000
CCAAAGAATCCCTACACCAAA...............................................................................................................................................................................................................................................................................................................................................................2130.3310100000000
......................................................................................................................................................................................TA-----------------TTATCATTAGTCATG------------TGCA............................................................................................................................................2130.3310100000000
...............................TCTCACAATGGACATTCTGG.................................................................................................................................................................................................................................................................................................................................2030.3310000000010
..................................CACAATGGACATTCTGGTAA..............................................................................................................................................................................................................................................................................................................................2030.3310100000000
...................................................................................ATCATA--------------------------------------ACCATACTATCG--GC.....................................................................................................................................................................................................................................2030.3310100000000
................................................................................................................................CCATACTATCG--GCTCTG---------------------CCGT........................................................................................................................................................................................................2130.3310100000000
................................................................................................................................................................................................................................................................................................................CAGATGTGTCTAGCACGTGTT...............................................2130.3310100000000
.............................................................................................................................................................................................................................................................................................................................................ATTGTAGTG----------ATATAGTGTGTAA.......2230.3310000001000
......................................................................................ATA--------------------------------------ACCATACTATCG--GCTCTG---------------------C...........................................................................................................................................................................................................2230.3310001000000
...............................................................................................................................................................................................................................................................ACTTTTTTTCTTTTTGTTGTC................................................................................................2130.3310100000000
....AGAATCCCTACACCAAAGCCC...........................................................................................................................................................................................................................................................................................................................................................2130.3310100000000
...........CTACACCAAAGCCAACTGCTT....................................................................................................................................................................................................................................................................................................................................................2130.3310100000000
.......................................................................................................................................................................................................................................................................TCTTTTTGTTGTCT-CTGCGAC.......................................................................................2130.3310100000000
.........................................................................................................................................CG--GCTCTG---------------------CCGTCCGTGCC.................................................................................................................................................................................................1930.3310100000000
..........................CTGCTTCTCACAATGGAC........................................................................................................................................................................................................................................................................................................................................1830.3311000000000
.............................................................................................................................................................................................................................................................................................................................................ATTGTAGTG----------ATATAGTGTGTA........2130.3310000001000
.........................................................................................................................................................................................................................................................................TTTTTGTTGTCT-CTGCGACTG.....................................................................................2130.3310100000000
.....................................AATGGACATTCTGGTAAGTC...........................................................................................................................................................................................................................................................................................................................2030.3310000000010
...................................................................................................................................TACTATCG--GCTCTG---------------------CCGTCC......................................................................................................................................................................................................2030.3310100000000
.......................................................................................TA--------------------------------------ACCATACTATCG--GCTCTG---------------------C...........................................................................................................................................................................................................2130.3310100000000
..........................................................................................................................................G--GCTCTG---------------------CCGTCCGTGCCTCTT.............................................................................................................................................................................................2230.3310100000000
.................................................................................TAATCATA--------------------------------------ACCATACTATCG--GT.....................................................................................................................................................................................................................................2230.3310100000000
..........................CTGCTTCTCACAATGGACATTC....................................................................................................................................................................................................................................................................................................................................2230.3310100000000
.................................................................................................................................................................................................................................................................................................................................TGTTG-TACCATATTGTAGTG----------....................2030.3310000000010
..........................................................................................................................................................................................................TATCATTAGTCATG------------TGCAC-AT........................................................................................................................................2130.3310100000000
..................................................................................................................................ATACTATCG--GCTCTG---------------------CCGTC.......................................................................................................................................................................................................2030.3310100000000
.................................................................................................................................................................................................................................................................................GTCT-CTGCGACTGTCTATGCC.............................................................................2130.3310100000000
..........................CTGCTTCTCACAATGGACA.......................................................................................................................................................................................................................................................................................................................................1930.3310100000000
........................................................................................................................................TCG--GCTCTG---------------------CCGTCCGTGCCT................................................................................................................................................................................................2130.3310100000000
.......................................................................................................................................ATCG--GCTCTG---------------------CCGTCCGTGCC.................................................................................................................................................................................................2130.3310100000000
....................................................................................................................................................................................................................................................................................T-CTGCGACTGTCTATGCCC............................................................................1930.3310100000000
...................................................................................................................................................................................................................................................................TTTTTCTTTTTGTTGTCT-CTGT..........................................................................................2230.3310100000000
.....................................................................................................................................................................................................................................................................................................CCCATCCACATCAGATGTG............................................................1930.3310100000000
......................................ATGGACATTCTGGTAAGTCTT-----------------........................................................................................................................................................................................................................................................................................................2130.3310100000000
...................................................................................................................................................................................................................TCATG------------TGCAC-ATTATTTACGG...............................................................................................................................2130.3310100000000
.............................CTTCTCACAATGGACATTCT...................................................................................................................................................................................................................................................................................................................................2030.3310100000000
.....................................................................................................................................................................................................................................................................TTTCTTTTTGTTGTCT-CTGC..........................................................................................2030.3310100000000
...............................TCTCACAATGGACATTCTG..................................................................................................................................................................................................................................................................................................................................1930.3310100000000
......AATCCCTACACCAAAGCCAAC.........................................................................................................................................................................................................................................................................................................................................................2130.3310100000000
.................................................................................................................................CATACTATCG--GCTCTG---------------------CCGTC.......................................................................................................................................................................................................2130.3310100000000
..........................................................................................................................................................................GTCCGTGCCTCTTA-----------------TTATCAT....................................................................................................................................................................2130.3310100000000
.......................................................................................................................................................................................................................................................................................................................GTCTAGCACGTGTTG-TACCAT.......................................2130.3310100000000
.CAAAGAATCCCTACACCAAA...............................................................................................................................................................................................................................................................................................................................................................2030.3310100000000
................................................................................................................................................................................................................................................................................TGTCT-CTGCGACTGTCTATGC..............................................................................2130.3310100000000
..................................CACAATGGACATTCTGGTAAGT............................................................................................................................................................................................................................................................................................................................2230.3310100000000
....................................................................................................................................................................................................................................................................................T-CTGCGACTGTCTATGCCCATCC........................................................................2330.3310100000000
....................................................................................TCATA--------------------------------------ACCATACTATCG--GCTC...................................................................................................................................................................................................................................2130.3310100000000
...............................................................................................................................ACCATACTATCG--GCTCTG---------------------C...........................................................................................................................................................................................................1930.3310100000000
........................................................................................................................................................................................................................................................................CTTTTTGTTGTCT-CTGCGAC.......................................................................................2030.3310000000010
.......................................................................................TA--------------------------------------ACCATACTATCG--GCTCTG---------------------CCG.........................................................................................................................................................................................................2330.3310100000000
.....GAATCCCTACACCAAAGCCA...........................................................................................................................................................................................................................................................................................................................................................2030.3310100000000
....................................................................................................................................................................................................................................................................TTTTCTTTTTGTTGTCT-CTGCG.........................................................................................2230.3310100000000
.............................................................................ATCATAATCATA--------------------------------------ACCATACT.............................................................................................................................................................................................................................................2030.3310100000000
............................................................................................................................................................................................................................................................CATACTTTTTTTCTTTTTGTT...................................................................................................2130.3310100000000
......................................................................................................................................................................................................................TG------------TGCAC-ATTATTTACGGTAA............................................................................................................................2130.3310000001000
...........................................................................................................................................................................................................................................................................................ACTGTCTATGCCCATCCACAT....................................................................2130.3310100000000
...........................TGCTTCTCACAATGGACATTCT...................................................................................................................................................................................................................................................................................................................................2230.3310100000000
.........CCCTACACCAAAGCCAACTGC......................................................................................................................................................................................................................................................................................................................................................2130.3310100000000
....AGAATCCCTACACCAAAGCC............................................................................................................................................................................................................................................................................................................................................................2030.3310100000000
....................................................................................................................................................................................................................................TGCAC-ATTATTTACGGTAAAT..........................................................................................................................2130.3310100000000
..............................................................................................................................................................................................................................................................TACTTTTTTTCTTTTTGTTGT.................................................................................................2130.3310100000000
................................................................................................................................................................................................................................................................................................................................GTGTTG-TACCATATTGTAG................................1930.3310100000000
.......................................TGGACATTCTGGTAAGTCTT-----------------........................................................................................................................................................................................................................................................................................................2030.3310100000000
..........................................ACATTCTGGTAAGTCTT-----------------TATC....................................................................................................................................................................................................................................................................................................2130.3310100000000
....................................................................................................................................................................................................................................................................................................................................TG-TACCATATTGTAGTG----------ATAT................2130.3310100000000
.........................................................................................................................................................................................................................................................................................CGACTGTCTATGCCCATCCA.......................................................................2030.3310100000000
........................................................................................................................................TCG--GCTCTG---------------------CCGTCCGTGCCTT...............................................................................................................................................................................................2230.3310100000000
.......................................................................................................................................................................................................................................................................................................................................TACCATATTGTAGTG----------ATATAG..............2130.3310000000010
.................................TCACAATGGACATTCTGGTAAA.............................................................................................................................................................................................................................................................................................................................2230.3310000000010
.....................................AATGGACATTCTGGTAAGTCT..........................................................................................................................................................................................................................................................................................................................2130.3310100000000
.......................................................................................................................................................................................A-----------------TTATCATTAGTCATG------------TGCAC-..........................................................................................................................................2130.3310100000000
.........................................................................................................................................................................................................................................................................................CGACTGTCTATGCCCATCCC.......................................................................2030.3310000100000
...............................................................................CATAATCATA--------------------------------------ACCATACTAT...........................................................................................................................................................................................................................................2030.3310100000000
...............................................................................................................................................TCTG---------------------CCGTCCGTGCCTCTTA-----------------T..........................................................................................................................................................................2130.3310100000000
..............................................................................................................................................................................................................ATTAGTCATG------------TGCAC-ATTATT....................................................................................................................................2130.3310100000000
.......................................................................................................................................................................................................................................................................................................CATCCACATCAGATGTGTCTA........................................................2130.3310100000000
.............................................................................................................................................GCTCTG---------------------CCGTCCGTGCCTCTT.............................................................................................................................................................................................2130.3310100000000
................................CTCACAATGGACATTCTGGT................................................................................................................................................................................................................................................................................................................................2030.3310100000000
..................................................................................................................................................................................................................................................................................TCT-CTGCGACTGTCTATGCC.............................................................................2030.3310100000000
............................................................................................................................................................................................................................................................................TTGTTGTCT-CTGCGACTGTCT..................................................................................2130.3310100000000
................CCAAAGCCAACTGCTTCTCAC...............................................................................................................................................................................................................................................................................................................................................2130.3310100000000
......................................................................................................................................................................................................................................................................TTCTTTTTGTTGTCT-CTGT..........................................................................................1960.1710000000010
droPer2
CCAAAGAATCCCTACACCAAAGCCAACTGCTTCTCACAATGGACATTCTGGTAAGTCTT-----------------TATCATAATCATA--------------------------------------ACCATACTATCG--GCTCTG---------------------CCGTCCCCGCCTCTTA-----------------TTATCATTAGTCATG------------TGCAC-ATTATTTACGGTAAATTACATACTTTTTTTCTTTTTGTTGTCTACTGCGACTGTCTATGCCTATCCACATCAGATGTGTCTAGCACGTGTTG-TACCATATTGTAGTG----------ATATAGTATGTATGTA-TATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................CAACTGCTTCTCACAATGGAC........................................................................................................................................................................................................................................................................................................................................2111.001100000
droWil2
CCAAAGAATCCTTACACAGAAGCAAATGCCTTCTCACATTGGACTTTCTGGTAAGCAA-------------------------------------------------------GAAAACAACA-AAAA--AT-----C---------------------------CCC----------------CCACACCCGCTACAAGTTTAGCATTAGTCATACGTAGACAAACTCACAT-ATTATTTACGGTAAATTAAAT---------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................CTCACATTGGACTTTCTG..................................................................................................................................................................................................................................................................................................................................1812.00220000
droVir3
CCAAAAAATCCCTACACAAATGCAAATCTATTCTCACAATGGAGTTTCTGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................CAAATCTATTCTCACAATGGA.........................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
CCAAAAAATCTTTACTCAAGTGCAAATGTATTTTCACGATGGACCTTTTGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droAna3
CCAAAGAATCCCTACACCAAGGCGAATATCTTCTCACAATGGAGCTTCTGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........CCCTACACCAAGGCGAATATCTTCTCAC...............................................................................................................................................................................................................................................................................................................................................2811.001010000
droBip1
CCAAAGAATCCCTACACCAAGGCGAATATCTTCTCACAATGGAGCTTCTGGTAAGTATC----------CTTG---GATCCGAACAATA--------------------------------------ACC------------------------------------------------------------------------------------------------------C-TCTGTTCTCTATGAATTATAT------------------------------------------------------------------------------------------------TTTC-----------------SizeHit CountTotal NormTotal
No Reads
droKik1
CCCAAGAATCCCTACACCGAGGCCAGCTTCTTCTCACAATGGAGCTTCTGGTGAGTGTC--------------------------------CCCAAAAAC-----------------------------C-------CCCA------GTG---------------CTCCCGAACCCTC--CCTA-----------------TTTGCGTTAGTCATG------------AGCCCCATTATTTACGGTAAATTATATA----------GT-----------T-------------------------------TTGTAGCACGTGCTCAGACCATATTG-AGCGAGCAAGTAGTATCAG--------------TSizeHit CountTotal NormTotal
No Reads
droFic1
CCAAAGAACCCATACACCAAAGCTAGCTACTTCTCACAATGGACCTTCTGGTAAGTGTT--------------------------------ACGAAAAA--------------------------------T-----C---------GTGTTATAGAAATCGGAATAG----------------CCATACATATAGTCACT----CATTAGTCATG------------AGCAAATTTTTTTACGGTAAATCACAC----------CTT-----------ACAG----------------------AGTTCAATGTAGCACGTGTTCTGACCATATTGTA-----------GTATCAGGTCTTTATCAGGTTCSizeHit CountTotal NormTotal
No Reads
droEle1
CCAAAGAATCCCTACACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCAAAGAATCCCTACACCAAGGCCAACTTCTTCTCACAATGGAGTTTCTGGTAAGTTTGCTGACATTATACCCCTTTATAGGAAA-AGGAATGCG--------------------------------A------------------------------------ATAG----------------CCAGA----------------CATTACATACG------------AGCAC-ATTATTTACGGTAAATTATAT----------CTT-----------TGCG----------------------GTTTCCAAATAGCACGTGTTTTGACCATATTGTA-----------GT--------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CCAAAGAATCCCTACACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGTGTA--------------------------------CCCGAAGAG-------------------------------C---------------------------------CGG----------------CCAGACATGGAGTCATTC----CTTAGTCATG------------GGCCC-ATTATTTACGGTAAATTATATG----TGTACCCT-----------G-------------------------------CTGTAGCACGTGTTCCTACCATATTGTA-----------GTATCAGGTTCTTATTGGGTTCSizeHit CountTotal NormTotal
No Reads
droTak1
CCAAAGAATCCCTATACCAAAGCAAACTTCTTCTCACAATGGAGCTTTTGGTAAGTTAC----------ACC----------AATTACG--------------------------------------A------------------------------------ACAT----------------CCAGAC--GTAGTCACTTTTCCATTAGTCATG------------AGCAC-ATTATTTACGGTAAATCGTATA----TGTTCCTC-----------T-------------------------------ATGTAGCACGTGTTCTTACCATATTGTA-----------GTATCAGGTTTTTAT-------SizeHit CountTotal NormTotal
No Reads
droEug1
CCAAAGAATCCATACACCAAAGCCAATTTCTTCTCACAATGGAGCTTCTGGTGAGTTTT-----------------TCCCTTGAAATGT--------------------------------------ACCTTAA--------------------------------AG----------------CCAGACATGCAGTCACTCCTCCATTAGTCATG------------AGAAC-ATTATTTACGGTAAATCATAC--TTTTGTACCTT-----------G---------------------------GTGCAGCTAGCACGTGTTCTTAACATATTGTA-----------GTATCAGGTTTTTAT-------SizeHit CountTotal NormTotal
No Reads
dm3
CCAAAGAATCCCTTCACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGTTTA--------------------------------ACTACAAACGTGTGGATATGTAGAATTAATCA-A--AACATGAAA------------------------------------------------ACAGACTTGGAGTCACTCCTGTATTAGTCATG------------AGAAT-ATCACTTACGGTAAATCAAAT------GTACTAT-----------T-------------------------------CTGTAGCACGTGTTCTCACCATATTGTA-----------GTATCAGGTTCGTATCAGG-GCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................TCTGGTGAGTTTA--------------------------------ACTACAA..................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..................................CACAATGGAGCTTCTGGTGAG.............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000
..AAAGAATCCCTTCACCAAAGCC............................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GTATCAGGTTCGTATCAGG-G.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................CTTCTTCTCACAATGGAGCTTCTGG.................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTTTA--------------------------------ACTACAAACGTGTGG..........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ATCCCTTCACCAAAGCCAACTTCTTCTC.................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTCTTCTCACAATGGAGCTTCTGGTG...............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAGAATCCCTTCACCAAAGCCAAC.........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACAATGGAGCTTCTGGTGAGT............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................ACTTACGGTAAATCAAAT------GTACTAT-----------T-------------------------------CT...........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTCTCACAATGGAGCTTCTGGTGGA.............................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAACTTCTTCTCACAATGGAGCTTCTGGA................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CCAAAGAATCCCTTCACCAAAGCCAAC.........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCCAACTTCTTCTCACAATGGAGCT......................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCAACTTCTTCTCACAATGG..........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ACAATGGAGCTTCTGGTGG..............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........TCCCTTCACCAAAGCCAACTTCTTCTCA................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ATCCCTTCACCAAAGCCAACT........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................ACGTGTTCTCACCATATTGTA-----------GTATC.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CCAAAGAATCCCTTCACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGCTTA--------------------------------ACCACAAACGTGTGCATGTGTAGAATTAATGA-A--AACATGAAA------------------------------------------------ACAGACTTGGAGTCACTCCTTTATTAGTCATG------------AGAAT-ACCACTTACGGTAAATCAAAT------GTACTAT-----------T-------------------------------CTGTAGCACGTGTTCTCACCATATTGTA-----------GTATCAGGTTTATATCAGG-GCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................TCTCACAATGGAGCTTCTGGTG...............................................................................................................................................................................................................................................................................................................................2211.00100000010000000000
..............................TTCTCACAATGGAGCTTCTGGTGG..............................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.....................................AATGGAGCTTCTGGTGG..............................................................................................................................................................................................................................................................................................................................1740.25100000010000000000
droSec2
CCAAAGAATCCCTTCACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGTTTA--------------------------------ACCACAAACGTGTGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................CTTCTCACAATGGAGCTTCTGGTG...............................................................................................................................................................................................................................................................................................................................2411.0011000
droYak3
CCAAAGAATCCCTACACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGTTCA--------------------------------CCC---AACTTGTGCATATGAAGAAAATATCAGA--AACATCAGA---------------------AA-CAGAACTT----------------CCAGACTTGGAGTCACTCCTTCATTAGTCACG--------------CAC-AGAACTTACGGTAAATCAGAT------GTACCTT-----------T-------------------------------CAGTAGCACGTGTTCTCACCATATTGTA-----------GTATCAGGTTT--ACTTA-TATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................CTTCTCACAATGGAGCTTCTGGTGA..............................................................................................................................................................................................................................................................................................................................2511.00101000000000
droEre2
CCAAAGAATCCTTTCACCAAAGCCAACTTCTTCTCACAATGGAGCTTCTGGTGAGTTGT--------------------------------CCC---AACCTGTGCATGTTTAGAAAATATCA-GA-AA-------------------------------CAGAATTT----------------TCAGACTTGGAGTCACTCCTTCATTAGTCATG------------AGCAC-ATTATTTACGGTAAATCATAT------GTACCTT-----------T-------------------------------TT-----------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................T----------------TCAGACTTGGAGTCACTCCT........................................................................................................................................................................2111.0011000000

Generated: 05/17/2015 at 10:10 PM