ID:

dps_3031

 Coordinate:

XR_group6:4143063-4143213 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.7 -21.1 -21.0

Flybase annnotation

exon [dpse_GLEANR_12498:1]; CDS [Dpse\GA19920-cds]; intron [Dpse\GA19920-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CACGCGATGCTGCTTCGAATCAATTGATCGACTACAAGAACACCCAAACGGTGAGTGGGAGTTCGATTGGGAGGGGAGTGAGAGGGAGCCGTATGATTGCATTTTTTTTTGTGTGTGTGCAAGTTGTTTGTGTGTGCGTGTGCAAGTGCCGGGCCCCGAAAAATGGAAGGAAAGGAGAAAAACAAAGAGAAAGGAAAGGCAAAGCGGAGTGCAAAAATAATTATTATTCAAAGCTCAAACAAAAAACAACA
**************************************************...........(((.(((....((((..((.......(((((((....((((.....(((((......)))))......))))))))).))........))..))))....))).))).................****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM343916
embryo
 V112
male body		 SRR902011
testis
.............................GACTACAAGAACACCCAAACGGT....................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
............................CGACTACAAGAACACCCAAACGGTGT..................................................................................................................................................................................................... 26 1 1 2.00 2 2 0 0 0 0
.......................TCGATCGACTACAAGAACACCCAAA........................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
..................................................GTGAGTGGGAGTTCGATTG...................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
....................................................GAGTGGGAGTTCGATTGGGAGGG................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................GAGAAAGGAAAGGCAAAGCGGAGTGC....................................... 26 0 1 1.00 1 1 0 0 0 0
..................ATCAATTGATCGACTACAAGAACAC................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
...................................................................................................................TGTGCAAGTTGTTTCTGTGT.................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0
.....................................................................................................................................................................GAAGGAAAGGAGAAAAACAA.................................................................. 20 0 1 1.00 1 1 0 0 0 0
........................TTATCGACTACAAGAACACCCAAAC.......................................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
..................................................................TTGGGAGGGGAGTGAGAGGG..................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0
...................TCAATTGATCGACTACAAGAA................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.........................GATCGACTACAAGAACACCC.............................................................................................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
........................TGATCGACTACAAGAACACCCAAACGG........................................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1
...............................CTACAAGAACACCCAAACGGTGT..................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0
...............................CTACAAGAACACCCAAACGGT....................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
....................CAATTGATCGACTACAAG..................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0
.............................................................................................................................................................GAAGAATGGAAGTAAAGTAGAA........................................................................ 22 3 3 0.33 1 0 0 1 0 0
..................................................................................................................GTGAGCAAGTTGTTCGTG....................................................................................................................... 18 2 4 0.25 1 1 0 0 0 0
.................................................................ATTGGGAGGGGATTTAGA........................................................................................................................................................................ 18 2 5 0.20 1 1 0 0 0 0
............................................................................................................................TGTTTGTGTGTGCGTGTGC............................................................................................................ 19 0 7 0.14 1 0 0 0 1 0
......................................................................GTGGGGAGTTTGAGGGAGCC................................................................................................................................................................. 20 3 8 0.13 1 1 0 0 0 0
TACGGGATGCTGCTTTGAA........................................................................................................................................................................................................................................ 19 3 16 0.06 1 0 0 0 1 0
..............................................AACGGTGAGTAAGGGTTCG.......................................................................................................................................................................................... 19 3 16 0.06 1 1 0 0 0 0
.............................................................................................................................GTTTGTGTGTGCGTGGGCGAG......................................................................................................... 21 2 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GTGCGCTACGACGAAGCTTAGTTAACTAGCTGATGTTCTTGTGGGTTTGCCACTCACCCTCAAGCTAACCCTCCCCTCACTCTCCCTCGGCATACTAACGTAAAAAAAAACACACACACGTTCAACAAACACACACGCACACGTTCACGGCCCGGGGCTTTTTACCTTCCTTTCCTCTTTTTGTTTCTCTTTCCTTTCCGTTTCGCCTCACGTTTTTATTAATAATAAGTTTCGAGTTTGTTTTTTGTTGT
******************************************************************...........(((.(((....((((..((.......(((((((....((((.....(((((......)))))......))))))))).))........))..))))....))).))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM444067
head
...................................................................................................GTAAAAAAAAACACACACACATT................................................................................................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................TGTAAAAAAAAACACACACACATT................................................................................................................................. 24 2 1 1.00 1 1 0 0
.................................................................................................ATGTAAAAAAAAACACACACACAT.................................................................................................................................. 24 2 1 1.00 1 1 0 0
......................................................................................TCGGCTTATTAGCGTAAAAAA................................................................................................................................................ 21 3 2 0.50 1 1 0 0
.................................................................................................AAGTAAAAAAAAACACACACACATT................................................................................................................................. 25 2 2 0.50 1 1 0 0
...................................................................................................GTAAAAAAAAACACACACACATTT................................................................................................................................ 24 2 3 0.33 1 0 1 0
................................................GCCTCTCAAACTCAAGCTAA....................................................................................................................................................................................... 20 3 15 0.07 1 1 0 0
..............................................................................................................................................................TGTTTACCTTTCTTTCCACTTT....................................................................... 22 3 18 0.06 1 0 0 1
......................................................................................................AAAAAAAACACGGACACGT.................................................................................................................................. 19 2 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:4143013-4143263 - dps_3031 CACGCGATGCTGCTTCGAATCAATTGATCGACTACAAGAACACCCAAACGGTGAGTGGG----------AGTT--------CGATTGGGAGGGGAGTGAGAGGGAGCCGTATGATTGCATTTTTT--TTTGTGTGTGTG---CAAG----TTGTT------TGT--GTGTG------------CGTGTGCAAGTGCCGGGCCC---------------------CGAAAAATGGAAGGAAAGGAGAA------------------------------------------------AAACAAAGAGAAAGGAA-------------------AGGCAAAGCGGAGTG---C-AAAAATAATTATTATTCAAAGCTCAAACAAAAAACAAC-----A
droPer2 scaffold_9:2433191-2433443 - CACGCGATGCTGCTTCGAATCAATTGATCGACTACAAGAACACCCAAACGGTGAGTGGG----------AGTT--------CGATTGGGAGGGGAGTGAGAGGGAGCCGTATGATTGCATTTTTTTTTTTTTGTGTGTG---CAAG----TTGTT------TGT--GTGTG------------TGTGTGCAAGTGCCGGGCCC---------------------CGAAAAATGGAAGGAAAGGAGAA------------------------------------------------AAACAAAGAGAAAGGAA-------------------AGGCAAAGCGGAGTG---C-AAAAATAATTATTATTCAAAGCTCAAACAAAAAACAAC-----A
droWil2 scf2_1100000004762:1680321-1680541 + CACGAGATGCCGCATCCAATCAATTAATTGACTACAAAAATTCCCAAACGGTAAGTGTG------C--GTA-A--------TGGTTGC--------------------------------------------GTAGGGA---CGAGGTTGTTGTGGGAGGGGTC--ATGGGCAAAAGCAAGGGGCAAAGAGCATGCCGGGCCC---------------------CGAAAAAAAGCAA--------AACAACAACAAGTAACAAAAAAGAGAAAGGCAAAAAGG------------A---AAAA-----------------A--AAAGAGA---------------------GAAACAAATTATA-------TTTCAGA-----------------
droVir3 scaffold_13049:18119989-18120044 - CACGCGATGCCGCTTCGAATCAACTGCTTGATTACAAGAACTCGCAAAAGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:23693088-23693141 - CACGCGATGCTGCTTCAAATCAATTGATTGATTATAAGAACTGCCAAAAGGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15110:24173964-24174019 - CGCGCGATGCCGCTTCAAACCAATTGCTTGATTATAAAAACTCTCAAAAGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:18619956-18620125 - CACGCGACGCCGCATCGAACCAGTTGATTGACTACAAAAACTCCCAAACGGTAAGTGGG------T--GTGTG--------CGAGAG----A-GAGG------------------------------------------CCA-------GACACAG------GT--GTATG------------TGTGTGTGTGAGCCGGCCTCTGAATGAGAAGA---G--------------------------AA-------------------------AGGTG-----------------------G-T-----------------G--GGGGGGA---------------------G-----AATCATT-------GTTCAAAATGAAATAAAC-----A
droBip1 scf7180000396741:1807556-1807730 - CACGCGACGCCGCATCGAACCAGTTGATTGACTACAAAAACTCCCAAACGGTAAGTGGG------T--GTGGG--------TGAGAGCC-----AGC------------------------------------------A-------------CAG----GTAT----ATG------------TGTGTTTGTTCGCCGGTAGGTGAATGAGAGGA---G--------------------------AA------------------------------------------------AGTCTGAGGGGGTGGT---------GCTGGCGGCA---------------------G-----AATCATT-------GTTCAAAATGAAATAAAC-----A
droKik1 scf7180000302248:157338-157521 - ACCGCGATGCCGCATCGAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGTG------TTGGTGTG--------TCTGTGTGCGA-G------------------------------------------------CAAG-------AA------TCT--GTGTG------------TGTGTGTGAGTGCCGGCCCGAAATTAGGGA-------------------------------------------------------------------------AAAAGAGAAAGGAAG-----------------------------------AAGAGGAGGGCAGCAGAAACAAAGCGTT-------GTTAAAAATAAAATAAAC------
droFic1 scf7180000453824:172055-172216 + AACGCGATGCGGCTTCAAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGCATAGGTATTGGTGTG--------C-AGCGCGAGA-GTGC------------------------------------------G-----------------------A--ATGTG------------CGTGTGTGTGTGCCGGCAGGAAAACA-----------------------------------------------------------------GA---------AA------------AAAG-----------------A--GAAGGGA---------------------G-----AAACATT-------GTTGAAAATAAAATAAAC------
droEle1 scf7180000490993:1727249-1727414 + AACGCGATGCGGCATCGAATCAGTTGATTGACTACAAAAACTGCCAAACGGTGAGTGCG------TTGGTGTG--------CGAGAGCGAGA-G--------------------------------------------------------GTGCGC----GTAT--ATGTG------------TGTTTGTGTCTGCCGGCAGGAAAATAAGA-------------------------------------------------------------GGA---------AA------------AAAG-----------------A--GAAGGGA---------------------G-----AAACATT-------GTTGAAAATAAAACAAAC------
droRho1 scf7180000779212:31548-31701 - AACGCGATGCTGCATCGAATCAGTTGATTGACTACAAAAATTCTCAAACGGTGAGTGTG------TTGGTGTG--------CGAGAGCGAGA-G--------------------------------------------------------CTGC--------------GCG------------TATGTGCGTGTGCCGGCAGGAAAATAAGA-------------------------------------------------------------GGC----------A------------AAAG-----------------A--GAAAGG----------------------------AAACATT-------GTCGAAAATAAAACAAA-------
droBia1 scf7180000302529:689048-689200 - AGCGCGATGCGGCTTCCAATCAGCTAATCGACTACAAGAACTCGCAGACGGTGAGTG--------TTGGTGTG--------CGGCAGCG--------------------------------------------------------------------------G--GCGCG------------CGTGTGTGCGTGCCGGCAGGAAAAAG-----------------------------------------------------------------AC---------------------GCAAAG-----------------A--GAAGGGA---------------------G-----AAACGTT-------GTTCAAAGTAAAATAAACAAAAAA
droTak1 scf7180000415184:240391-240548 - AACGCGATGCGGCTTCGAATCAGTTAATTGACTACAAAAACTCGCAGACGGTGAGTGTG------TTGGTGTG--------CGAGAGCGAGC-GAGC-------------------------------------------------------------------------G------------TATGTGTGTGTGCCGGCAGGAAAATAAGAAA-------------------------------AA------------------------------------------------ACACAAAG-----------------A--GAAGGGA---------------------G-----AAACATT-------GTTCAAAATAAAATAAAC------
droEug1 scf7180000409471:675377-675552 - CACGCGATGCGGCATCAAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGTG------TTGGTGTA--------CGGTCGCGAGA-GAGTGAGAGG---------------------------------------------TGGTGCGT----GCGT--GTGTG------------TGTCTGTGTGTACCGGCAGGGAAGAA-----------------------------------------------------------------AA---------------------TAAAAG-----------------A--GAAGGGAGA-----------------------CGAAACATT-------GTTCAAAATAAAATAAAC------
dm3 chr3L:18815893-18816081 + GACGCGATGCGGCTTCCAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGTG------TTGGTGTG--------CGAGCGCGAGA-GAGC------------------------------------------GCA-------ACTGCA--------T--GTGTG------------TGCGTGTGTGTGCCGGCAGGAAAATAAGAAAACAAG--------------------------AA-------------------------AGGCAAAAAAG------------ACAAAAAG-----------------A--GAAGGGA---------------------G-----AAGCATT-------GTACGAAATGAAATAAAC-----A
droSim2 3l:18435011-18435190 + GACGCGATGCGGCTTCCAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGCG------TTGGTGTG--------CGAGCGCGAGA-GAGC------------------------------------------GCA-------GCTGCAT------GT--GTGTG------------TGCGTGTGTGTGCCGGCAGGAAAATAAGAAAACAAG--------------------------AA-------------------------AGGC---------AA------------AAAG-----------------A--GAAGGGA---------------------G-----AAGCATT-------GTACGAAATAAAATAAA-------
droSec2 scaffold_19:780064-780243 + GACGCGATGCGGCTTCCAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGCG------TTGGTGTG--------CGAGCGCGAGA-GAGC------------------------------------------GCA-------GTTGCA--------T--GTGTG------------CGTGTGTGTGAGCCGGCAGGAAAATAAGAAAACAAG--------------------------AA-------------------------AGGC---------AA------------AAAG-----------------A--GAAGGGA---------------------G-----AAGCATT-------GTACGAAATAAAATAAAC-----A
droYak3 3L:15255233-15255455 - GACGCGATGCGGCTTCAAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGTG------CTGGTGTGTGTGTGTGTGAGCGCGCGA-GAGCGG------T------------------------------------------TGCTGCGTGCGTGTGT--GTGTG------------TGCGTGTGAGTGCCGGCAGGAAAATAAGAAAACAAGAAAACCGAAAAATAA---------------------------------------GACAAAAAAGGAAA------------AAAG-----------AGAAAGA--GAAGGGA---------------------G-----AAGCATT-------GTTCGAAATAAAATAAAC------
droEre2 scaffold_4784:15116358-15116551 - GACGCGATGCGGCTTCAAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGTG------TTGGAGTG--------CGAGCGCGCGA-GAGCGA------GG------------------------------------------GCTGCGT----GTGTATGTGTG------------CATGTGTGTGTGCCGGCAGGAAAGTAAAAA------------------------------ACAA---AA----------------------ACAAAA---------------------AAACGAACAAAAGAGGAAGA--GAAGGGA---------------------AA----AAACATT-------GTTCGAACAAAA------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CACGCGATGCTGCTTCGAATCAATTGATCGACTACAAGAACACCCAAACGGTGAGTGGG----------AGTT--------CGATTGGGAGGGGAGTGAGAGGGAGCCGTATGATTGCATTTTTT--TTTGTGTGTGTG---CAAG----TTGTT------TGT--GTGTG------------CGTGTGCAAGTGCCGGGCCC---------------------CGAAAAATGGAAGGAAAGGAGAA------------------------------------------------AAACAAAGAGAAAGGAA-------------------AGGCAAAGCGGAGTG---C-AAAAATAATTATTATTCAAAGCTCAAACAAAAAACAAC-----ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................GACTACAAGAACACCCAAACGGT.......................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
............................CGACTACAAGAACACCCAAACGGTGT.....................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
..................................................GTGAGTGGG----------AGTT--------CGATTG....................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................GAGTGGG----------AGTT--------CGATTGGGAGGG..............................................................................................................................................................................................................................................................................................................2311.0010100000000
..............................................................................................................................................................................................................................................................................................................GAGAAAGGAA-------------------AGGCAAAGCGGAGTG---C-............................................2611.0010100000000
..................ATCAATTGATCGACTACAAGAACAC................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.........................................................................................................................................................................................................................................GAAGGAAAGGAGAA------------------------------------------------AAACAA..............................................................................................2011.0010100000000
....................................................................................TTGGGAGGGGAGTGAGAGGG...................................................................................................................................................................................................................................................................................................2011.0010000001000
...................TCAATTGATCGACTACAAGAA...................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
.........................GATCGACTACAAGAACACCC..............................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
........................TGATCGACTACAAGAACACCCAAACGG........................................................................................................................................................................................................................................................................................................................................................2711.0010000000010
...............................CTACAAGAACACCCAAACGGTGT.....................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...............................CTACAAGAACACCCAAACGGT.......................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
....................CAATTGATCGACTACAAG.....................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
.......................................................................................................................................................TGTT------TGT--GTGTG------------CGTGTGC.............................................................................................................................................................................................................1970.1410000001000
droPer2
CACGCGATGCTGCTTCGAATCAATTGATCGACTACAAGAACACCCAAACGGTGAGTGGG----------AGTT--------CGATTGGGAGGGGAGTGAGAGGGAGCCGTATGATTGCATTTTTTTTTTTTTGTGTGTG---CAAG----TTGTT------TGT--GTGTG------------TGTGTGCAAGTGCCGGGCCC---------------------CGAAAAATGGAAGGAAAGGAGAA------------------------------------------------AAACAAAGAGAAAGGAA-------------------AGGCAAAGCGGAGTG---C-AAAAATAATTATTATTCAAAGCTCAAACAAAAAACAAC-----ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................ATCAATTGATCGACTACAAGA....................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.ACGCGATGCTGCTTCGAATCA.....................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.....GATGCTGCTTCGAATCAATTGATCGACT..........................................................................................................................................................................................................................................................................................................................................................................2812.002200000
.............................GACTACAAGAACACCCAAACGGT.......................................................................................................................................................................................................................................................................................................................................................2311.001010000
.....................AATTGATCGACTACAAGAACACCC..............................................................................................................................................................................................................................................................................................................................................................2411.001000010
....................................................................................TTGGGAGGGGAGTGAGAGGGA..................................................................................................................................................................................................................................................................................................2111.001000001
.......................TTGATCGACTACAAGAACACCCA.............................................................................................................................................................................................................................................................................................................................................................2311.001100000
............CTTCGAATCAATTGATCG.............................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..........................................................G----------AGTT--------CGATTGGGAGGGGAGT..........................................................................................................................................................................................................................................................................................................2111.001000001
.........................GATCGACTACAAGAACACC...............................................................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
CACGAGATGCCGCATCCAATCAATTAATTGACTACAAAAATTCCCAAACGGTAAGTGTG------C--GTA-A--------TGGTTGC--------------------------------------------GTAGGGA---CGAGGTTGTTGTGGGAGGGGTC--ATGGGCAAAAGCAAGGGGCAAAGAGCATGCCGGGCCC---------------------CGAAAAAAAGCAA--------AACAACAACAAGTAACAAAAAAGAGAAAGGCAAAAAGG------------A---AAAA-----------------A--AAAGAGA---------------------GAAACAAATTATA-------TTTCAGA-----------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................GA---CGAGGTTGTTGTGGGAGGGGTC--.....................................................................................................................................................................................................................................2411.00100100
........................TAATTGACTACAAAAATTC................................................................................................................................................................................................................................................................................................................................................................1911.00110000
.....................AATTAATTGACTACAAAAATTCCC..............................................................................................................................................................................................................................................................................................................................................................2411.00101000
CACGAGATGCCGCATCCAATC......................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
......................................................................................................................................................................................................................................AAAGCAA--------AACAACAACAAGTA........................................................................................................................................2111.00101000
...................................................................................................................................................................................AGGGGCAAAGAGCATGCCGGGCCC---------------------...........................................................................................................................................................................2411.00100001
..........................................................................................................................................................................................................................................................................................G------------A---AAAA-----------------A--AAAGAGA---------------------GAAACAA.....................................2120.50100010
......................................................................................................................................................................................................................................................................................AAAGG------------A---AAAA-----------------A--AAAGAGA---------------------............................................1820.50101000
droVir3
CACGCGATGCCGCTTCGAATCAACTGCTTGATTACAAGAACTCGCAAAAGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................ATCAACTGCTTGATTACAAGAACTCGC..............................................................................................................................................................................................................................................................................................................................................................2712.002001000000000000001000000000000000000000000000000000000000000000
....................CAACTGCTTGATTACAAGA....................................................................................................................................................................................................................................................................................................................................................................1912.002001000000000000001000000000000000000000000000000000000000000000
.ACGCGATGCCGCTTCGAA........................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000002000000000000000000000000000000000000
..........CGCTTCGAATCAACTGCTTGA............................................................................................................................................................................................................................................................................................................................................................................2112.002000000100000000000000000000001000000000000000000000000000000000
..................ATCAACTGCTTGATTACAAGAACT.................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
....................CAACTGCTTGATTACAAGAACTCGC..............................................................................................................................................................................................................................................................................................................................................................2511.001000000000000010000000000000000000000000000000000000000000000000
...GCGATGCCGCTTCGAATCAACTGCT...............................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
..............................ATTACAAGAACTCGCAAAAGGAAT.....................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
..............................ATTACAAGAACTCGCAAAAGGA.......................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
............CTTCGAATCAACTGCTTGATTA.........................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.....................AACTGCTTGATTACAAGAAC..................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
........GCCGCTTCGAATCAACTGCT...............................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000010000000000000000000000000000000000000
....................CAACTGCTTGATTACAAGAACT.................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
...............CGAATCAACTGCTTGATTACAAGA....................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........GCTTCGAATCAACTGCTTGATC..........................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.............................GATTACAAGAACTCGCAAAA..........................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.......TGCCGCTTCGAATCAACTGCTTG.............................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
CACGCGATGCCGCTTCGAATC......................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
................................TACAAGAACTCGCAAAAGG........................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
..................ATCAACTGCTTGATTACAAGA....................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.............................GATTACAAGAACTCGCAAAAGGAAT.....................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000001000000000000000000000000000000
...............................TTACAAGAACTCGCAAA...........................................................................................................................................................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000001000000
...........................TTGATTACAAGAACTCGCAAAA..........................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000001000000000000000000000000000000
droMoj3
CACGCGATGCTGCTTCAAATCAATTGATTGATTATAAGAACTGCCAAAAGGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........GCTTCAAATCAATTGATTGA............................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........................GATTGATTATAAGAACTGCC..............................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................ATCAATTGATTGATTATAAGAACTGCC..............................................................................................................................................................................................................................................................................................................................................................2711.001100000
..................ATCAATTGATTGATTATAAGAACTGC...............................................................................................................................................................................................................................................................................................................................................................2611.001100000
..............TCAAATCAATTGATTGATTATAAGAACTG................................................................................................................................................................................................................................................................................................................................................................2911.001100000
....................CAATTGATTGATTATAAGAACTGCC..............................................................................................................................................................................................................................................................................................................................................................2511.001000100
.....................AATTGATTGATTATAAGAACTGCC..............................................................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
CGCGCGATGCCGCTTCAAACCAATTGCTTGATTATAAAAACTCTCAAAAGGTGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................AAACCAATTGCTTGATTATA.......................................................................................................................................................................................................................................................................................................................................................................2011.00110
droAna3
CACGCGACGCCGCATCGAACCAGTTGATTGACTACAAAAACTCCCAAACGGTAAGTGGG------T--GTGTG--------CGAGAG----A-GAGG------------------------------------------CCA-------GACACAG------GT--GTATG------------TGTGTGTGTGAGCCGGCCTCTGAATGAGAAGA---G--------------------------AA-------------------------AGGTG-----------------------G-T-----------------G--GGGGGGA---------------------G-----AATCATT-------GTTCAAAATGAAATAAAC-----ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................GATTGACTACAAAAACTCCC..............................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................TTGACTACAAAAACTCCCAAAC..........................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............................GACTACAAAAACTCCCAAACGGT.......................................................................................................................................................................................................................................................................................................................................................2311.001010000
...GCGACGCCGCATCGAACCAGTT..................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
CACGCGACGCCGCATCGAACC......................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................................................................................................................................................CAG------GT--GTATG------------TGTGTGTGTGAGCCG.....................................................................................................................................................................................................2511.001010000
.....................AGTTGATTGACTACAAAA....................................................................................................................................................................................................................................................................................................................................................................1811.001100000
........GCCGCATCGAACCAGTTGTC...............................................................................................................................................................................................................................................................................................................................................................................2030.331000010
droBip1
CACGCGACGCCGCATCGAACCAGTTGATTGACTACAAAAACTCCCAAACGGTAAGTGGG------T--GTGGG--------TGAGAGCC-----AGC------------------------------------------A-------------CAG----GTAT----ATG------------TGTGTTTGTTCGCCGGTAGGTGAATGAGAGGA---G--------------------------AA------------------------------------------------AGTCTGAGGGGGTGGT---------GCTGGCGGCA---------------------G-----AATCATT-------GTTCAAAATGAAATAAAC-----ASizeHit CountTotal NormTotal
No Reads
droKik1
ACCGCGATGCCGCATCGAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGTG------TTGGTGTG--------TCTGTGTGCGA-G------------------------------------------------CAAG-------AA------TCT--GTGTG------------TGTGTGTGAGTGCCGGCCCGAAATTAGGGA-------------------------------------------------------------------------AAAAGAGAAAGGAAG-----------------------------------AAGAGGAGGGCAGCAGAAACAAAGCGTT-------GTTAAAAATAAAATAAAC------SizeHit CountTotal NormTotal
No Reads
droFic1
AACGCGATGCGGCTTCAAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGCATAGGTATTGGTGTG--------C-AGCGCGAGA-GTGC------------------------------------------G-----------------------A--ATGTG------------CGTGTGTGTGTGCCGGCAGGAAAACA-----------------------------------------------------------------GA---------AA------------AAAG-----------------A--GAAGGGA---------------------G-----AAACATT-------GTTGAAAATAAAATAAAC------SizeHit CountTotal NormTotal
No Reads
droEle1
AACGCGATGCGGCATCGAATCAGTTGATTGACTACAAAAACTGCCAAACGGTGAGTGCG------TTGGTGTG--------CGAGAGCGAGA-G--------------------------------------------------------GTGCGC----GTAT--ATGTG------------TGTTTGTGTCTGCCGGCAGGAAAATAAGA-------------------------------------------------------------GGA---------AA------------AAAG-----------------A--GAAGGGA---------------------G-----AAACATT-------GTTGAAAATAAAACAAAC------SizeHit CountTotal NormTotal
No Reads
droRho1
AACGCGATGCTGCATCGAATCAGTTGATTGACTACAAAAATTCTCAAACGGTGAGTGTG------TTGGTGTG--------CGAGAGCGAGA-G--------------------------------------------------------CTGC--------------GCG------------TATGTGCGTGTGCCGGCAGGAAAATAAGA-------------------------------------------------------------GGC----------A------------AAAG-----------------A--GAAAGG----------------------------AAACATT-------GTCGAAAATAAAACAAA-------SizeHit CountTotal NormTotal
No Reads
droBia1
AGCGCGATGCGGCTTCCAATCAGCTAATCGACTACAAGAACTCGCAGACGGTGAGTG--------TTGGTGTG--------CGGCAGCG--------------------------------------------------------------------------G--GCGCG------------CGTGTGTGCGTGCCGGCAGGAAAAAG-----------------------------------------------------------------AC---------------------GCAAAG-----------------A--GAAGGGA---------------------G-----AAACGTT-------GTTCAAAGTAAAATAAACAAAAAASizeHit CountTotal NormTotal
No Reads
droTak1
AACGCGATGCGGCTTCGAATCAGTTAATTGACTACAAAAACTCGCAGACGGTGAGTGTG------TTGGTGTG--------CGAGAGCGAGC-GAGC-------------------------------------------------------------------------G------------TATGTGTGTGTGCCGGCAGGAAAATAAGAAA-------------------------------AA------------------------------------------------ACACAAAG-----------------A--GAAGGGA---------------------G-----AAACATT-------GTTCAAAATAAAATAAAC------SizeHit CountTotal NormTotal
No Reads
droEug1
CACGCGATGCGGCATCAAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGTG------TTGGTGTA--------CGGTCGCGAGA-GAGTGAGAGG---------------------------------------------TGGTGCGT----GCGT--GTGTG------------TGTCTGTGTGTACCGGCAGGGAAGAA-----------------------------------------------------------------AA---------------------TAAAAG-----------------A--GAAGGGAGA-----------------------CGAAACATT-------GTTCAAAATAAAATAAAC------SizeHit CountTotal NormTotal
No Reads
dm3
GACGCGATGCGGCTTCCAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGTG------TTGGTGTG--------CGAGCGCGAGA-GAGC------------------------------------------GCA-------ACTGCA--------T--GTGTG------------TGCGTGTGTGTGCCGGCAGGAAAATAAGAAAACAAG--------------------------AA-------------------------AGGCAAAAAAG------------ACAAAAAG-----------------A--GAAGGGA---------------------G-----AAGCATT-------GTACGAAATGAAATAAAC-----ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................TCCCAAACGGTGAGTGTG------..........................................................................................................................................................................................................................................................................................................................................18110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000
.................................ACAAAAACTCCCAAACGGTGAGTGTG------T.........................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ACTCCCAAACGGTGAGTG..................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................GCATT-------GTACGAAATGAAATAAAC-----.2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTGTG------TTGGTGTG--------CGAG......................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000000000
..........................................................................................................................................................................................................................................................................................G------------ACAAAAAG-----------------A--GAAGGGA---------------------G-----......................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000001000000000000000000000000000000000000
......................................AACTCCCAAACGGTGAGTGTG------TTG.......................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ATTGACTACAAAAACTCCCAA............................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGTTGATTGACTACAAAAACTCCCA.............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTGTG------TTGGTGTG--------CGAGCG....................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................TGACTACAAAAACTCCCAAACGGTT......................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AATCAGTTGATTGACTACAAA.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................CGCGAGA-GAGC------------------------------------------GCA-------ACTGCA--------........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATGCGGCTTCCAATCAGTTGA................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........GCTTCCAATCAGTTGATTGACT..........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CA-------ACTGCA--------T--GTGTG------------TGCGTGT.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................G------------TGCGTGTGTGTGCCGGCAGGA...............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................GGTGTG--------CGAGCGCGAGA-GAGC------------------------------------------................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................TGTG--------CGAGCGCGAGA-GAG...........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........GGCTTCCAATCAGTTGAT...............................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGCGGCTTCCAATCAGTTGATTG.............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................AACGGTGAGTGTG------TTGGTGTG--------..........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................ACTCCCAAACGGTGAGTGTG------TTGGTGTG--------C.........................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
................................................CGGTGAGTGTG------TTGGTGTG--------CG........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GAAGGGA---------------------G-----AAGCATT-------GTACGAAATG..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................GAGC------------------------------------------GCA-------ACTGCA--------T--GTGTG------------TGCGTGTGTG..........................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GATGCGGCTTCCAATCAG....................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CTACAAAAACTCCCAAACGGTGAG....................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
........................................................GTG------TTGGTGTG--------CGAGCGCGAG................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................CCCAAACGGTGAGTGTG------TTGGTG....................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CGGCTTCCAATCAGTTGATTGAC...........................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................AACTCCCAAACGGTGAGTGTG------T.........................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................CAAACGGTGAGTGTG------TTGGTG....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CTCCCAAACGGTGAGTGTG------TTG.......................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................GCGAGA-GAGC------------------------------------------GCA-------ACTGCA--------T--GTG..................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...................................................................GGTGTG--------CGAGCGCGAGA-GAG...........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...GCGATGCGGCTTCCAATCA.....................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGATGCGGCTTCCAATCAGTTGATTGAC...........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CTCCCAAACGGTGAGTGTG------TTGGTG....................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACAAAAACTCCCAAACGGTT......................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GATGCGGCTTCCAATCAGTTGATTGAC...........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................GCGAGA-GAGC------------------------------------------GCA-------ACTGCA--------T--GTGTG------------TG..................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............................CTACAAAAACTCCCAAACGG........................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ACGGTGAGTGTG------TTGGTGT...................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................ACGGTGAGTGTG------TTGGTG....................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGTTGATTGACTACAAAAAC..................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................A--------T--GTGTG------------TGCGTGTGTGTGCCGGC...................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GATGCGGCTTCCAATCAGT...................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TTGACTACAAAAACTCCCTT............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................ATCAGTTGATTGACTACA.......................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTGTG------TTGGTGTG--------CG........................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................CTGCA--------T--GTGTG------------TGCGTGTGTG..........................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...................................................TGAGTGTG------TTGGTGTG--------CG........................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................CA--------T--GTGTG------------TGCGTGTGTGTG........................................................................................................................................................................................................20130.3850000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000300000000000000001000
......................................................................................................................................................CTGCA--------T--GTGTG------------TGCGTGTGT...........................................................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................T--GTGTG------------TGCGTGTGTGTGC.......................................................................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000100000000000
.......................................................................................................................................................TGCA--------T--GTGTG------------TGCGTGTGTGTG........................................................................................................................................................................................................2260.1710000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................T--GTGTG------------TGCGTGTGTGTG........................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000
.......................................................................................................................................................TGCA--------T--GTGTG------------TGCGTGTGTGT.........................................................................................................................................................................................................2180.1310000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................CA--------T--GTGTG------------TGCGTGTGTG..........................................................................................................................................................................................................18180.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000
........................................................................................................................................................GCA--------T--GTGTG------------TGCGTGTGTGTG........................................................................................................................................................................................................21100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................GCA--------T--GTGTG------------TGCGTGTG............................................................................................................................................................................................................17200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GCA--------T--GTGTG------------TGCGTGTGTG..........................................................................................................................................................................................................19150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droSim2
GACGCGATGCGGCTTCCAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGCG------TTGGTGTG--------CGAGCGCGAGA-GAGC------------------------------------------GCA-------GCTGCAT------GT--GTGTG------------TGCGTGTGTGTGCCGGCAGGAAAATAAGAAAACAAG--------------------------AA-------------------------AGGC---------AA------------AAAG-----------------A--GAAGGGA---------------------G-----AAGCATT-------GTACGAAATAAAATAAA-------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................TGATTGACTACAAAAACTCCC..............................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..CGCGATGCGGCTTCCAATCAGT...................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
...............................................ACGGTGAGTGCG------TTGGTGTG--------C.........................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
...........................TTGACTACAAAAACTCCCAAACGGT.......................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
....CGATGCGGCTTCCAATCAGTTGATTG.............................................................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
............................TGACTACAAAAACTCCCAAACGGTT......................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
......ATGCGGCTTCCAATCAGTTGATT..............................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
...................................................................................................................................................................T--GTGTG------------TGCGTGTGTGTG........................................................................................................................................................................................................18200.35700000000007000000
...................................AAAAACTCCCAAACGGTTT.....................................................................................................................................................................................................................................................................................................................................................1940.25100000001000000000
droSec2
GACGCGATGCGGCTTCCAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGCG------TTGGTGTG--------CGAGCGCGAGA-GAGC------------------------------------------GCA-------GTTGCA--------T--GTGTG------------CGTGTGTGTGAGCCGGCAGGAAAATAAGAAAACAAG--------------------------AA-------------------------AGGC---------AA------------AAAG-----------------A--GAAGGGA---------------------G-----AAGCATT-------GTACGAAATAAAATAAAC-----ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..CGCGATGCGGCTTCCAATCAGTTGAT...............................................................................................................................................................................................................................................................................................................................................................................2611.0011000
...................................................................GGTGTG--------CGAGCGCGAGA-GAGC------------------------------------------GCA-------GT....................................................................................................................................................................................................................................................2611.0010100
....................................................................GTGTG--------CGAGCGCGAGA-GAGC------------------------------------------G...............................................................................................................................................................................................................................................................2111.0010100
.......................................ACTCCCAAACGGTGAGTGCG------TTGGTGTG--------..........................................................................................................................................................................................................................................................................................................................2811.0010001
.................................................................TTGGTGTG--------CGAGCGCGAGA-GA............................................................................................................................................................................................................................................................................................................2111.0010100
...GCGATGCGGCTTCCAATCAGTTGATT..............................................................................................................................................................................................................................................................................................................................................................................2611.0010010
......ATGCGGCTTCCAATCAGTTGATTGA............................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.............................GACTACAAAAACTCCCAAACGGTTT.....................................................................................................................................................................................................................................................................................................................................................2511.0011000
.............................................................................................................................................A-------GTTGCA--------T--GTGTG------------CGTGTG..............................................................................................................................................................................................................1911.0010001
.....................................................................................................................................................................................................................................................AA-------------------------AGGC---------AA------------AAAG-----------------A--GAAGC...................................................................1840.2510001
droYak3
GACGCGATGCGGCTTCAAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGTG------CTGGTGTGTGTGTGTGTGAGCGCGCGA-GAGCGG------T------------------------------------------TGCTGCGTGCGTGTGT--GTGTG------------TGCGTGTGAGTGCCGGCAGGAAAATAAGAAAACAAGAAAACCGAAAAATAA---------------------------------------GACAAAAAAGGAAA------------AAAG-----------AGAAAGA--GAAGGGA---------------------G-----AAGCATT-------GTTCGAAATAAAATAAAC------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................CCCAAACGGTGAGTGTG------CTGGT.....................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.....GATGCGGCTTCAAATCAGTTGAT...............................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............................GACTACAAAAACTCCCAAACGGT.......................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
....................CAGTTGATTGACTACAAAAACTCCC..............................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...................................................................GGTGTGTGTGTGTGTGAGCGCGC.................................................................................................................................................................................................................................................................................................................2311.00100000010000
..........................................................................................................................................................................G------------TGCGTGTGAGTGCCGGCAGGA...............................................................................................................................................................................................2211.00100000010000
droEre2
GACGCGATGCGGCTTCAAATCAGTTGATTGACTACAAAAACTCCCAAACGGTGAGTGTG------TTGGAGTG--------CGAGCGCGCGA-GAGCGA------GG------------------------------------------GCTGCGT----GTGTATGTGTG------------CATGTGTGTGTGCCGGCAGGAAAGTAAAAA------------------------------ACAA---AA----------------------ACAAAA---------------------AAACGAACAAAAGAGGAAGA--GAAGGGA---------------------AA----AAACATT-------GTTCGAACAAAA------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................CAAAAGAGGAAGA--GAAGGGA---------------------............................................2011.0010000010
...GCGATGCGGCTTCAAATCAGTTGATT..............................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
......................................................GTGTG------TTGGAGTG--------CGAGCGC...................................................................................................................................................................................................................................................................................................................2011.0010000010
...............................................................................................................................................................................................................................................................................................................................GA--GAAGGGA---------------------AA----AAACATT-------........................1811.0011000000

Generated: 05/18/2015 at 05:59 AM