ID:

dps_3029

Coordinate:

XR_group6:4050160-4050310 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.2 -7.1 -7.0 -6.8

Flybase annnotation

CDS [Dpse\GA11778-cds]; exon [dpse_GLEANR_12508:4]; intron [Dpse\GA11778-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-
mature
star
  1. 4_group3:8666471-8666490 +
  2. dps_3029  XR_group6:4050280-4050299 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAACGAGCAGCCTATTATATACGGTACTCACAGAGTTTACGGATATATTAGTTTTGTAGTAGATGTGGATGTGTGTAACGCCCAGAAGAAAGCGCTTTCGACCCCGTGAAGTAAATTGATCGTATCGGCTATCGATATAGCTTTGTTTGTCTGTCCGTCTGTCCATTCACGTCTACATCTCAGAGACTATAAGAGCTAGAGCAAGCACAATTTCGCCCCGCCTCCAGAATGAAGAGAATCATTTAGAGTGT
*************************************************************...((............((....((..((...(((((((....)).)))))...))..))....))))**************************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
SRR902012
CNS imaginal disc
SRR902011
testis
M040
female body
V112
male body
GSM444067
head
......................................................................................................................................................................................GAGACTATAAGAGCTAGAGCAAGC............................................. 24 0 3 4.00 12 7 0 5 0 0 0
..............................................................................................................GTAAATTGATCGTATCGGC.......................................................................................................................... 19 0 1 3.00 3 0 3 0 0 0 0
...................................................................................................................................................................................TCAGAGACTATAAGAGCTAGAGC................................................. 23 0 20 0.80 16 16 0 0 0 0 0
.............................................................GATGTGGATGTGTGTAACGC.......................................................................................................................................................................... 20 0 2 0.50 1 0 0 1 0 0 0
......................................................................................................................................................................................GAGACTATAAGAGCTAGAGCAAGCA............................................ 25 0 2 0.50 1 1 0 0 0 0 0
......................................................................................................................................................................................GAGACTATAAGAGCTAGAGCAAG.............................................. 23 0 4 0.50 2 2 0 0 0 0 0
......................................................................................................................................................................................GAGACTATAAGAGCTGGAGCAAACACA.......................................... 27 2 15 0.40 6 3 0 3 0 0 0
.............................................................GAGGTGGATGTGTGTAACGCC......................................................................................................................................................................... 21 1 3 0.33 1 0 0 0 0 0 1
....................................................................................................................................................................................CAGAGACTATAAGAGCTAGAGCAAGC............................................. 26 0 3 0.33 1 1 0 0 0 0 0
...........................................................TAGGGGTGGATGTGTGTAACG........................................................................................................................................................................... 21 2 8 0.25 2 0 0 0 1 1 0
........................................................................................................................................................................................................GCAAGCTAAATTTCGCCTCG............................... 20 3 4 0.25 1 0 0 0 1 0 0
...............................................................................................................................................................................CATCTCAGAGACTATAAGGGCT...................................................... 22 1 5 0.20 1 0 0 0 1 0 0
.......................................................................................................................................................................................AGACTATAAGAGCTAGAGCAAG.............................................. 22 0 10 0.20 2 0 0 2 0 0 0
...........................................................TAGAGGTGGATGTGTGTAACG........................................................................................................................................................................... 21 1 5 0.20 1 0 0 0 1 0 0
..........................................................GTAGAGGTGGATGTGTGTAAC............................................................................................................................................................................ 21 1 5 0.20 1 0 0 0 1 0 0
.........................................................................................................................................................................................................CGAGCGCAATTTCACCCCGC.............................. 20 3 6 0.17 1 0 0 0 0 1 0
..........................................................GTAGGGGTGGATGTGTGTAA............................................................................................................................................................................. 20 2 10 0.10 1 0 0 0 0 1 0
......................................................................................................................................................................................AAGACTATAAGAGCTAGAGCAAGCAG........................................... 26 2 20 0.10 2 0 0 2 0 0 0
......................................................................................................................................................................................GAGACTATAAGAACTAGAGAAAGC............................................. 24 2 20 0.10 2 0 0 2 0 0 0
..........................................................GTAGAGGTGGGTGTGTGTAAC............................................................................................................................................................................ 21 2 11 0.09 1 0 0 0 1 0 0
.........................................................................TGTAACGCCCAGCACAATGC.............................................................................................................................................................. 20 3 15 0.07 1 0 0 0 1 0 0
......................................................................................................................................................................................GAGACTATAAGAGCTGGAGCAAACAC........................................... 26 2 17 0.06 1 0 0 1 0 0 0
....................................................................................................................................................................................CAGAGACTATAAGAACTAGAGAAAGC............................................. 26 2 19 0.05 1 0 0 1 0 0 0
......................................................................................................................................................................................AAGACTCTAAGAGCTAGAGCAAGCAG........................................... 26 3 20 0.05 1 0 0 1 0 0 0
....................................................................................................................................................................................CAGAGACTATAAGAGCTAGAG.................................................. 21 0 20 0.05 1 0 0 0 1 0 0
............................................................AGGAGTGGATGTGTGTAACGC.......................................................................................................................................................................... 21 2 20 0.05 1 0 0 0 0 1 0

Anti-sense strand reads

CTTGCTCGTCGGATAATATATGCCATGAGTGTCTCAAATGCCTATATAATCAAAACATCATCTACACCTACACACATTGCGGGTCTTCTTTCGCGAAAGCTGGGGCACTTCATTTAACTAGCATAGCCGATAGCTATATCGAAACAAACAGACAGGCAGACAGGTAAGTGCAGATGTAGAGTCTCTGATATTCTCGATCTCGTTCGTGTTAAAGCGGGGCGGAGGTCTTACTTCTCTTAGTAAATCTCACA
**************************************************************************************************************************...((............((....((..((...(((((((....)).)))))...))..))....))))*************************************************************
Read size # Mismatch Hit Count Total Norm Total M040
female body
M062
head
SRR902011
testis
GSM343916
embryo
...............................................................................CGGGTCTTCTTTCGCGAAGG........................................................................................................................................................ 20 1 5 0.20 1 1 0 0 0
.....................................................................................................................CGATCATAGCCGATTGCTA................................................................................................................... 19 3 11 0.18 2 2 0 0 0
..............................................................................TCGGGTCTTCTTTCGCGAAG......................................................................................................................................................... 20 2 12 0.08 1 1 0 0 0
...............................................................................................AAAGTAGGGGCGCTTCATT......................................................................................................................................... 19 3 19 0.05 1 1 0 0 0
......................................................................................................................................................................................CTCTGATATTCTCGATCTCGT................................................ 21 0 20 0.05 1 0 1 0 0
........................................................................................................................................................................................CTGATATTCTCGATCTCGTT............................................... 20 0 20 0.05 1 1 0 0 0
......................................................................................................................................................................................CTCTGATATTCTCGATCTCGTT............................................... 22 0 20 0.05 1 0 0 1 0
...................................................................................................................................................................................AGTCTCTGATATTCTCGAT..................................................... 19 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................................................TCTCTGATATTCTCGATCTCG................................................. 21 0 20 0.05 1 0 0 0 1
..................................................................CCTACACACATTGCGGGTCTT.................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:4050110-4050360 - dps_3029 GAACGAGCAGC--CTATTATATACGGTACTCACAGA------G-TTTAC-GGAT--ATATTAGTTTTGTAGTAGATGTGGATGTGTGTAACGCCCAGAAGAAAGCGCTTTCGACCCCGTGAAGTA--------AAT-------TGATCG-TATC---G---GCT--ATCGATATAGCTTTGTTT--------------------GTCTGTCCGTC----TGTC----CATT--CA----------CGTCTACATCTCAGAGACTATAAGAGCTAGAGCA--AGCACAATT-------------------TCGCCCCGCC---------TCCAGAATGAAGAGAATCATTTAGAGTGT
droPer2 scaffold_9:2339506-2339756 - GAACGAGCAGC--CTATTATATACGGTACTCACAGA------G-TTTAC-GGAT--ATATTAGTTTTGTAGTAGATGTGGATGTGTGTAACGCCCAGAAGAAAGCGCTTCCGACCCCGTGAAGTA--------AAT-------TGATCG-TATC---G---GCT--ATCGATATAGCTTTGTTT--------------------GTCTGTCCATC----TGTC----CATT--CA----------CGTCTAGATCTCAGAGACTATAAGAGCTAGAGCA--AGCAAAATT-------------------TCGCCCCGCC---------TCCAGAATGAAGAGAATCATTTAGAGTGG
droWil2 scf2_1100000003932:1053-1304 + A---------------TTATACCATACACCCATAGG------G-TGAAA-TGGT--ATATTAAAGTCGCCA-------AAATGTATGTAACAGACAGAAGGAAGCATCTCCGACCCCACAAAGTA--------TATATATTCTTGATCAGGATC---AACAACCGATTCGATCTAGCCATGTCC--------------------GTCTGTCCGTC----TGTC----CGTATGAA----------CACCCAGATCTCGGAGACTATAAGAGCTAGAGCC--ACCAAATTTGGTACGCAGTCTCGT-------------G---------TAGTATGTACAGTTATTTGTTTCAAATTT
droVir3 scaffold_12936:395644-395875 - ----------------TTATACACTGAACACATTAAAAATGGG-TATAA-GGGT--ATATTTTATTTGTGCAATATCCAAATGTATGTAACAGGCAGAAGGAAGCATCTCGGACCCCATAAAGTA--------TATATATTCTTGATCAGCATC---AATAGCTGAGTCGATCTAGCCATGTCC--------------------GTCTGTCTGTC----CGTC----CGTCAGC----------------AAATTGGGTAAATAATAAGAGCTAGAGCC--ACCAAGCATGATATGTTGCTTCTA---------------------------GA-------AT--------------
droMoj3 scaffold_6540:15372005-15372238 - A--------AC--TTATTATACCCTGAACCCATTGAAAATGGGAAATCA-GGGT--ATAATGGTTTTGTGA-------AAAAGTATGTAACGGGCAGAAGGAGGCGTGGCAGACCCCACAAAGTA--------TATATATTCTTGATCAGCGCG---ATGAGCTGAGTCGATATAGCCCTGTCC--------------------GTCTGTCCGTC----CGTC----CGTCCGTC--CGTATGAGTGCGTCGATCTCAGAAGTTATAAGAGCTAGAAAG--CTGAAATTTGGCATGC------------------------------------------------------------
droGri2 scaffold_14822:674234-674421 + A-------------------ACCCATTACAAATGGT--------TAAAA-GGGT--ATAATGGTTTTGTGC-------AAATGTATATAACAGGCAGAAGGACGCATCTCCGACCCTATGAAGTA--------AATATATTCTTGATCAGGGTCTACAACCGATAAGTCGATATAGCC--------------------------GTCTGTCCGTT----TCTC----TGTACGAA----------CACGCAGATCTCAGAGACTATATAAGCTAGAG--------------------------------------------------------------------------------
droAna3 scaffold_13034:2146784-2146963 + G------------------------GTACTCGTAG----------------CGT--ATGTTGTAGTCGTGT-------GAATGTATGTAACAGCGAAAAGGAATCATCTCCGACCCCATAAAGAA--------TATATATTTTTGATCAACATC---AACAGCTAAGGCGATATAGCCATGTCC--------------------GTCTGATCGTC----TGTC----CGAATAAT----------CGCTTGGATCTCAAAGACTATATAAGATAAGGC-------------------------------------------------------------------------------
droBip1 scf7180000396710:151761-151964 - GATCGAAACAC--TTTTTATAAACGGTACTCGTAGA------A-TAGAG-GGGT--ATATTGCAGTCGTGTTA-----CATACATTCTAACATAGAGAGGGGATCATCTCCTCTCCCATAAAGTA--------TATATATTCTTGATCATTATC---AACAGCCGAGTCGATATAAACATGTCC--------------------GTCTGT------------C----CGTATGAA----------CGTGTGGATCTCAGAGACTATAAGAGATAGAGC-------------------------------------------------------------------------------
droKik1 scf7180000298847:1292-1434 - G-------------------------------------------------------------------------------AAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTA--------TATATATTCTTGATCAGCATC---AACAGCCGAGTCGATATAGCCATGTCC--------------------GTCTGTCCGTC----TGTC----CGTCTGTC----------C----ACCTGTCTGTTTCTACGCAAACTAG----------------------------------------------------------------------------------
droEle1 scf7180000490526:51884-52164 + ----------------TTATACCCGTTACTTGTTGA------G-TGAAA-GGGT--ATATTGTAATCGTTG-------AAATGTATGTAATAGGTAGAAGAAAGCGTTTCCGACCCTATAAAGTA--------TATATATTCTTGATCAGGTTC---AATAGCCGAGTCGGTCTAGCCATGTCCTTCGGTCTGACCATCTGTCTGTCCGTCCGTC----TGTC----CGTC--CGTTAGTATAG-GGTCGAGATCTCGTAAACTATAAAAGCAAGGGAT--TTCAAAACG-------------------GAGCCACGCCCACTGTAACTCCCACAAATCGCGAATCACTAAACACGT
droRho1 scf7180000779193:5586-5822 + ----------------TTATACCCGTTACTCGTAGA------G-TAAAA-GGGT--ATATTGTATTCATGC-------AAAAGTATGAAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAGGTA--------TATATATTCTTGATCAGGGTC---ACTAGCCGAGTCGATATAGCCATGTCC--------------------GTCTGTCCGTC----TGTTCGTCCGTATGAA----------CGCTGAGATCTCGGAAACTATAAAAGCTAGAAGA--TTGGCATTTTGCATGCAGATTCTA---------------------------GG-------AGTTCATTTA------
droBia1 scf7180000302521:51067-51290 + GGACAGGGAGCTATTTTTATACCCGTTACTCGTAAA------G-TAAAA-GGGTATATACTAGATTCGTCG-------CAAAGTGTGTAACAGGTAAAAGAAGCCGTTTCCGACCCCATAAAGTA--------TATGTAATCTGAATCAGGATC---ACTTGCCGAGTCGATATAGCCATGTTC--------------------GTCTGTCCGTC----CGTC----CGTATGAA----------CGCTGAGATCTCGGAAACTATAAAAGCTAAAACA--ACCAAACTT-------------------------------------------------------------------
droTak1 scf7180000414069:20348-20589 + A---------------TTATACCCGTTACTCGTAGA------G-TTT-A-GGGT--ATATTGTATTCGTGC-------AAAAGTATGTAACAGCTAGAAGGAAGCAATTCCGACCCTATAAAGTA--------TATATATTCTTGATCAGGGAGCCGAGGAGCCGAGTCGATATAGCCATGTCC--------------------GTCTGTCTGTC----CGTC----CGTATGAA----------CGCTGAGATCTCGGAAACTATAAAAGCTAGAAGA--TTGACATTTTGCATGCAGATTCTA---------------------------AG-------AGTTCCTACGCAGCGC
droEug1 scf7180000408780:23884-24091 - G------CGGC--TCTTTATACCCGTTACTCGTAGA------C-TAAAA-GGGT--ATACTAAATTCGTTG-------AAAAGTATGTAACAGATAGAAGGAAGCGTTTTGGACCCTGTAAAGTAAATACATATATATATTCTTG-------------------------------CCATGTCC--------------------GT----CCGTC----TGTC----CGTATGAA----------CGCTGAGATCTCAGGAACCATAAGAGATGAAT-A---------------CGCAGCCC--AAGTTTATTTCCGCA---------TCCGG------------------------
dm3 chr3L:24178096-24178312 - ----------------TTATACCCCTTACTCGTAGA------G-TAAAA-GGGT--AAACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAACGGA--------TAAATATTCTTGATCAGCATC---AATAGCTAAGTCGATCTGACCGTGTCC--------------------GCCT------------GTC----CGTAAGAA----------CGTCAACATCTCGGAAACTATAAAAGCTAGAAGG--TTCAGATTCCGCATATAGAGTCTA---------------------------GA-------GA--------------
droSim2 3l:22899908-22900120 - --------------TGTTATACCCGTTACTCGTAGA------G-AAAAA-GGGA--ATAGTAGAATAGAGG-------AAAAGTATGCAACATGCAGAAGGACGCGTTTCCGACCATAAAAAGTA--------TATATATTCTTAATCAGGATC---AATTGCCGAGTCGGTCTAGCCGTGTCC--------------------------------------------GTATGAA----------CGTCGAGATCTCAGGAACTATAAAAGCTAGAATAGGTTGAGATACCGCATTCAGATTCTA---------------------------GA-------GA--------------
droSec2 scaffold_55:41698-41920 + ----------------TTATACCCGTTACTTGTAGA------G-CGAAATGGGA--ATACTAGATTCGTTG-------AAAAGTATGTAACAGGTAGAAGGAAGCGTTTCCCACCATAAAAAGTA--------AATATATTCTTGATCGAGATC---ACTAGACGAGTCGACCTGGCCACATCG--------------------GTCTGTCACTC----CGTC----CGTATGAA----------CGTCGGGATCTCAGGTACTATAAAAGCTAGAATA--TTAATATTT-TCATGCAGCTTCCA---------------------------GA-----------------------
droYak3 v2_chrUn_1574:664-886 - ----------C--TTTTTATACACATTACTCGTAGA------G-TAA-A-GGGT--ATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTA--------CATATATTCTTGATCAGGAAC---AATAGCCGAGTCGATCTGGCCATGTCC--------------------GTCTGTCCGT--------C----CGTATGAA----------CGTCGAGATCTCAGGAACTACAAAAGCTAGAAAG--CTGAGATTCAGCATACAGACTCCA---------------------------GA-------A---------------
droEre2 scaffold_4929:26482921-26483116 + ----------------TTATATCCATTACTCATAGA------G-TAAGA-GGGT--ATACTAGATTCGTTG-------AAAAGTATGTAACACGCAGAAGGAAACGTTTCCGACCATATAAAGTA--------TATATATTCTTGATCAGCATC---AATAGCCGAGTCGATCTAGCCATGTCC--------------------GT--GTCCGTCCGTCTGTC----CGATAGAA----------CGCCTCGATCTCAGAAACTACAAAAGCTAGA---------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GAACGAGCAGC--CTATTATATACGGTACTCACAGA------G-TTTAC-GGAT--ATATTAGTTTTGTAGTAGATGTGGATGTGTGTAACGCCCAGAAGAAAGCGCTTTCGACCCCGTGAAGTA--------AAT-------TGATCG-TATC---G---GCT--ATCGATATAGCTTTGTTT--------------------GTCTGTCCGTC----TGTC----CATT--CA----------CGTCTACATCTCAGAGACTATAAGAGCTAGAGCA--AGCACAATT-------------------TCGCCCCGCC---------TCCAGAATGAAGAGAATCATTTAGAGTGTSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................GAGACTATAAGAGCTAGAGCA--AGC.........................................................................2434.00120000000750
..........................................................................................................................GTA--------AAT-------TGATCG-TATC---G---GC..................................................................................................................................................................................................1913.0030000000003
...............................................................................................................................................................................................................................................................TCAGAGACTATAAGAGCTAGAGC...............................................................................23200.801600000001600
.........................................................................GATGTGGATGTGTGTAACGC........................................................................................................................................................................................................................................................................2020.5010000000010
..................................................................................................................................................................................................................................................................GAGACTATAAGAGCTAGAGCA--AGCA........................................................................2520.5010000000100
..................................................................................................................................................................................................................................................................GAGACTATAAGAGCTAGAGCA--AG..........................................................................2340.5020000000200
................................................................................................................................................................................................................................................................CAGAGACTATAAGAGCTAGAGCA--AGC.........................................................................2630.3310000000100
...................................................................................................................................................................................................................................................................AGACTATAAGAGCTAGAGCA--AG..........................................................................22100.2020000000020
................................................................................................................................................................................................................................................................CAGAGACTATAAGAGCTAGAG................................................................................21200.0510100000000
droPer2
GAACGAGCAGC--CTATTATATACGGTACTCACAGA------G-TTTAC-GGAT--ATATTAGTTTTGTAGTAGATGTGGATGTGTGTAACGCCCAGAAGAAAGCGCTTCCGACCCCGTGAAGTA--------AAT-------TGATCG-TATC---G---GCT--ATCGATATAGCTTTGTTT--------------------GTCTGTCCATC----TGTC----CATT--CA----------CGTCTAGATCTCAGAGACTATAAGAGCTAGAGCA--AGCAAAATT-------------------TCGCCCCGCC---------TCCAGAATGAAGAGAATCATTTAGAGTGGSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...................................................................................TGTGTAACGCCCAGAAGAAAG.............................................................................................................................................................................................................................................................2130.331000001
..................................................................................GTGTGTAACGCCCAGAAGAAAGCG...........................................................................................................................................................................................................................................................2430.331010000
.................................................................................................................................................................................................................................................................AGAGACTATAAGAGCTAGAGCA--AGA.........................................................................25180.061010000
......................................................................................................................................................................................................................................................GTCTAGATCTCAGAGACT.............................................................................................18200.051100000
droWil2
A---------------TTATACCATACACCCATAGG------G-TGAAA-TGGT--ATATTAAAGTCGCCA-------AAATGTATGTAACAGACAGAAGGAAGCATCTCCGACCCCACAAAGTA--------TATATATTCTTGATCAGGATC---AACAACCGATTCGATCTAGCCATGTCC--------------------GTCTGTCCGTC----TGTC----CGTATGAA----------CACCCAGATCTCGGAGACTATAAGAGCTAGAGCC--ACCAAATTTGGTACGCAGTCTCGT-------------G---------TAGTATGTACAGTTATTTGTTTCAAATTTSizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...............................................................................................................................................................................................................................................................................................TTTGGTACGCAGTCTCGT-------------G---------TA...........................2130.33100010
.............................................................AAAGTCGCCA-------AAATGTATGTA............................................................................................................................................................................................................................................................................21200.25505000
..........................................................................................................................................................................................................................................................................AAGAGCTAGAGCC--ACCAAATTTGGT................................................................25200.20404000
...............................................................................................................................................................................................................................................................................CTAGAGCC--ACCAAATTTGGTA...............................................................21200.10200002
...................................................................................................................................................................................TGTCC--------------------GTCTGTCCGTC----TGTC----CGTA..............................................................................................................................24200.10200020
........................................................................................................................................................................CGATCTAGCCATGTCC--------------------GTCTGTCCGT...............................................................................................................................................26200.10202000
......................................................................................................................................................................................................................................................................CTATAAGAGCTAGAGCC--ACCAAATT....................................................................25200.10200020
............................................................TAAAGTCGCCA-------AAATGTATGTAACAGA.......................................................................................................................................................................................................................................................................27200.10200020
.............................................................................................................................................................................................................................TC----CGTATGAA----------CACCCAGATCTCGGAG................................................................................................26120.08101000
.................................................................................TGTATGTAACAGACAGAAGGAAGCA...........................................................................................................................................................................................................................................................25160.06100010
.........................................................................................................................................................................................................................................AA----------CACCCAGATCTCGGAGACT.............................................................................................21170.06110000
............................................................................................GACAGAAGGAAGCATCTCCGA....................................................................................................................................................................................................................................................21170.06100010
.....................................................................................................................................................................................................................................................CACCCAGATCTCGGAGACT.............................................................................................19170.06110000
.........................................................................................................................................................................................................................................AA----------CACCCAGATCTCGGAGAC..............................................................................................20180.06110000
........................................................................................................................................................................CGATCTAGCCATGTCC--------------------GTCTGTCCGTC----T.........................................................................................................................................28200.05100100
........................................................................................................................................................................CGATCTAGCCATGTCC--------------------GTC......................................................................................................................................................19200.05101000
........................................................................................................................................................................................................................................................................................................CAGTCTCGT-------------G---------TAGTATGTACA..................21200.05100010
..........................................................ATTAAAGTCGCCA-------AAATGTATGTAA...........................................................................................................................................................................................................................................................................25200.05100100
.............................................................................................................................................................................................................................................................TCTCGGAGACTATAAGAGCTAGAGC...............................................................................25200.05101000
....................................................................................ATGTAACAGACAGAAGGAAGC............................................................................................................................................................................................................................................................21200.05100100
.....................................................................................................................................................................................TCC--------------------GTCTGTCCGTC----TGTC----CGTATGA...........................................................................................................................25200.05101000
..................................................................................................AGGAAGCATCTCCGACCCC................................................................................................................................................................................................................................................19200.05100010
..............................................................................................................................................................................AGCCATGTCC--------------------GTCTGTCCGTC----TG........................................................................................................................................23200.05100001
...........................................................................................................................................................................................................................................................GATCTCGGAGACTATAAGAGCT....................................................................................22200.05101000
.............................................................................................................................................................................................................................................................................AGCTAGAGCC--ACCAAATTTGG.................................................................21200.05100010
......................................................................................................AGCATCTCCGACCCCACAAAGTA--------TATA............................................................................................................................................................................................................................27200.05101000
droVir3
----------------TTATACACTGAACACATTAAAAATGGG-TATAA-GGGT--ATATTTTATTTGTGCAATATCCAAATGTATGTAACAGGCAGAAGGAAGCATCTCGGACCCCATAAAGTA--------TATATATTCTTGATCAGCATC---AATAGCTGAGTCGATCTAGCCATGTCC--------------------GTCTGTCTGTC----CGTC----CGTCAGC----------------AAATTGGGTAAATAATAAGAGCTAGAGCC--ACCAAGCATGATATGTTGCTTCTA---------------------------GA-------AT--------------SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
...................................................................................TATGTAACAGGCAGAAGGAAGCATC.........................................................................................................................................................................................................................................................25201.80360000000000000000000000000000360000000000000000000000000000000000
................................TTAAAAATGGG-TATAA-GGGT--ATATTT.......................................................................................................................................................................................................................................................................................................26110.9110000000001000100000000000221000001010010000000000000000000000000
..................................................................................GTATGTAACAGGCAGAAGGAAGCAT..........................................................................................................................................................................................................................................................25200.50100000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................ATATTCTTGATCAGCATC---AATAGC..................................................................................................................................................................................................24200.357000004000000000000000000000000000003000000000000000000000000000
..................................................................................GTATGTAACAGGCAGAAGGAAGCA...........................................................................................................................................................................................................................................................24200.306000000000000000000000000600000000000000000000000000000000000000
.................................................................................................AAGGAAGCATCTCGGACCCC................................................................................................................................................................................................................................................2090.222000000000000100000000000000000000000000000000000000000000000001
..............................................................................................................................................................................................................................................................................GCTAGAGCC--ACCAAGCATGATATGTTG..........................................................2750.201000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TAAGAGCTAGAGCC--ACCAAGCATG..................................................................2450.201000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................TGGGTAAATAATAAGAGCTAGAGCC--ACC.........................................................................28200.204000000000000000000000000000000000040000000000000000000000000000
....................................................................................................................................................................GAGTCGATCTAGCCATGTCC--------------------GTCT.....................................................................................................................................................24200.204000000000000000000000000000000400000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AAGAGCTAGAGCC--ACCAAGCATC..................................................................2360.171100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATTGGGTAAATAATAAGAGCTAGAGC...............................................................................26200.153000000003000000000000000000000000000000000000000000000000000000
..............................................................................................CAGAAGGAAGCATCTCGGACC..................................................................................................................................................................................................................................................2180.131010000000000000000000000000000000000000000000000000000000000000
................................TTAAAAATGGG-TATAA-GGGT--ATATTTT......................................................................................................................................................................................................................................................................................................2790.111000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................TCGATCTAGCCATGTCC--------------------GTCTGTCTG................................................................................................................................................26200.102000000000000000000002000000000000000000000000000000000000000000
.......................................................................................................................................TATATTCTTGATCAGCATC---AATAG...................................................................................................................................................................................................24200.102000000000000000000002000000000000000000000000000000000000000000
...........................................................................TCCAAATGTATGTAACAGG.......................................................................................................................................................................................................................................................................19200.102000002000000000000000000000000000000000000000000000000000000000
.......................................................................AATATCCAAATGTATGTAACAGGCAGA...................................................................................................................................................................................................................................................................27150.071000000000000000000000000000100000000000000000000000000000000000
..............................................................TATTTGTGCAATATCCAAATGTATG..............................................................................................................................................................................................................................................................................25160.061000000000000000000000000001000000000000000000000000000000000000
.......................................TGGG-TATAA-GGGT--ATATTTTATTTG.................................................................................................................................................................................................................................................................................................25170.061000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................TCAGCATC---AATAGCTGAGTCGATCTAG.....................................................................................................................................................................................27190.051000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GTAAATAATAAGAGCTAGAGCC--ACCAA.......................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................TAGCTGAGTCGATCTAGCCATGTCC--------------------GT.......................................................................................................................................................27200.051000000000000000000000000000000000000100000000000000000000000000
................................TTAAAAATGGG-TATAA-GGGT--ATATTTC......................................................................................................................................................................................................................................................................................................27200.051000000000000100000000000000000000000000000000000000000000000000
...........................................................................TCCAAATGTATGTAACAGGCAGAAGGAA..............................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................GTCGATCTAGCCATGTCC--------------------GTC......................................................................................................................................................21200.051000000010000000000000000000000000000000000000000000000000000000
................................TTAAAAATGGG-TATAA-GGG................................................................................................................................................................................................................................................................................................................19200.051000001000000000000000000000000000000000000000000000000000000000
...................................................................................TATGTAACAGGCAGAAGGAAGCA...........................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.........................GAACACATTAAAAATGGG-TATAA-GGG................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................ATTGGGTAAATAATAAGAGCTAG..................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TAATAAGAGCTAGAGCC--ACCAA.......................................................................22200.051000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AAATTGGGTAAATAATAAGAGCTAGAGC...............................................................................28200.051000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TTGGGTAAATAATAAGAGCTAGAGCC--............................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................TA--------TATATATTCTTGATCAGCA.............................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TAAATAATAAGAGCTAGAGCC--ACC.........................................................................24200.051000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................TCAGCATC---AATAGCTGAGTCGATC........................................................................................................................................................................................24200.051100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TGGGTAAATAATAAGAGCTAGAGCC--............................................................................25200.051000000001000000000000000000000000000000000000000000000000000000
droMoj3
A--------AC--TTATTATACCCTGAACCCATTGAAAATGGGAAATCA-GGGT--ATAATGGTTTTGTGA-------AAAAGTATGTAACGGGCAGAAGGAGGCGTGGCAGACCCCACAAAGTA--------TATATATTCTTGATCAGCGCG---ATGAGCTGAGTCGATATAGCCCTGTCC--------------------GTCTGTCCGTC----CGTC----CGTCCGTC--CGTATGAGTGCGTCGATCTCAGAAGTTATAAGAGCTAGAAAG--CTGAAATTTGGCATGC------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
.......................................TGGGAAATCA-GGGT--ATAATGGTTT...................................................................................................................................................................................................................................................................................................24202.30460000460
............................................................................................GGCAGAAGGAGGCGTGGCAG.....................................................................................................................................................................................................................................................20200.306600000
.......................................................................................................................................................................................C--------------------GTCTGTCCGTC----CGTC----CGTCC.............................................................................................................................21200.153000003
.......................................................................................TAACGGGCAGAAGGAGGCGTGG........................................................................................................................................................................................................................................................22200.102200000
.........................................................................................................................................TATTCTTGATCAGCGCG---ATGG....................................................................................................................................................................................................21200.051100000
...........................................................ATGGTTTTGTGA-------AAAAGTATGT.............................................................................................................................................................................................................................................................................22200.051100000
..............................................................................................................................................................................................................CTGTCCGTC----CGTC----CGTCCGTC--C.......................................................................................................................22200.051100000
.....................................................................................TGTAACGGGCAGAAGGAGGC............................................................................................................................................................................................................................................................20200.051000001
..................................GAAAATGGGAAATCA-GGGT--ATAAT........................................................................................................................................................................................................................................................................................................24200.051100000
droGri2
A-------------------ACCCATTACAAATGGT--------TAAAA-GGGT--ATAATGGTTTTGTGC-------AAATGTATATAACAGGCAGAAGGACGCATCTCCGACCCTATGAAGTA--------AATATATTCTTGATCAGGGTCTACAACCGATAAGTCGATATAGCC--------------------------GTCTGTCCGTT----TCTC----TGTACGAA----------CACGCAGATCTCAGAGACTATATAAGCTAGAG--------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads
droAna3
G------------------------GTACTCGTAG----------------CGT--ATGTTGTAGTCGTGT-------GAATGTATGTAACAGCGAAAAGGAATCATCTCCGACCCCATAAAGAA--------TATATATTTTTGATCAACATC---AACAGCTAAGGCGATATAGCCATGTCC--------------------GTCTGATCGTC----TGTC----CGAATAAT----------CGCTTGGATCTCAAAGACTATATAAGATAAGGC-------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
No Reads
droBip1
GATCGAAACAC--TTTTTATAAACGGTACTCGTAGA------A-TAGAG-GGGT--ATATTGCAGTCGTGTTA-----CATACATTCTAACATAGAGAGGGGATCATCTCCTCTCCCATAAAGTA--------TATATATTCTTGATCATTATC---AACAGCCGAGTCGATATAAACATGTCC--------------------GTCTGT------------C----CGTATGAA----------CGTGTGGATCTCAGAGACTATAAGAGATAGAGC-------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
G-------------------------------------------------------------------------------AAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTA--------TATATATTCTTGATCAGCATC---AACAGCCGAGTCGATATAGCCATGTCC--------------------GTCTGTCCGTC----TGTC----CGTCTGTC----------C----ACCTGTCTGTTTCTACGCAAACTAG----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
----------------TTATACCCGTTACTTGTTGA------G-TGAAA-GGGT--ATATTGTAATCGTTG-------AAATGTATGTAATAGGTAGAAGAAAGCGTTTCCGACCCTATAAAGTA--------TATATATTCTTGATCAGGTTC---AATAGCCGAGTCGGTCTAGCCATGTCCTTCGGTCTGACCATCTGTCTGTCCGTCCGTC----TGTC----CGTC--CGTTAGTATAG-GGTCGAGATCTCGTAAACTATAAAAGCAAGGGAT--TTCAAAACG-------------------GAGCCACGCCCACTGTAACTCCCACAAATCGCGAATCACTAAACACGTSizeHit CountTotal NormTotal
No Reads
droRho1
----------------TTATACCCGTTACTCGTAGA------G-TAAAA-GGGT--ATATTGTATTCATGC-------AAAAGTATGAAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAGGTA--------TATATATTCTTGATCAGGGTC---ACTAGCCGAGTCGATATAGCCATGTCC--------------------GTCTGTCCGTC----TGTTCGTCCGTATGAA----------CGCTGAGATCTCGGAAACTATAAAAGCTAGAAGA--TTGGCATTTTGCATGCAGATTCTA---------------------------GG-------AGTTCATTTA------SizeHit CountTotal NormTotal
No Reads
droBia1
GGACAGGGAGCTATTTTTATACCCGTTACTCGTAAA------G-TAAAA-GGGTATATACTAGATTCGTCG-------CAAAGTGTGTAACAGGTAAAAGAAGCCGTTTCCGACCCCATAAAGTA--------TATGTAATCTGAATCAGGATC---ACTTGCCGAGTCGATATAGCCATGTTC--------------------GTCTGTCCGTC----CGTC----CGTATGAA----------CGCTGAGATCTCGGAAACTATAAAAGCTAAAACA--ACCAAACTT-------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
A---------------TTATACCCGTTACTCGTAGA------G-TTT-A-GGGT--ATATTGTATTCGTGC-------AAAAGTATGTAACAGCTAGAAGGAAGCAATTCCGACCCTATAAAGTA--------TATATATTCTTGATCAGGGAGCCGAGGAGCCGAGTCGATATAGCCATGTCC--------------------GTCTGTCTGTC----CGTC----CGTATGAA----------CGCTGAGATCTCGGAAACTATAAAAGCTAGAAGA--TTGACATTTTGCATGCAGATTCTA---------------------------AG-------AGTTCCTACGCAGCGCSizeHit CountTotal NormTotal
No Reads
droEug1
G------CGGC--TCTTTATACCCGTTACTCGTAGA------C-TAAAA-GGGT--ATACTAAATTCGTTG-------AAAAGTATGTAACAGATAGAAGGAAGCGTTTTGGACCCTGTAAAGTAAATACATATATATATTCTTG-------------------------------CCATGTCC--------------------GT----CCGTC----TGTC----CGTATGAA----------CGCTGAGATCTCAGGAACCATAAGAGATGAAT-A---------------CGCAGCCC--AAGTTTATTTCCGCA---------TCCGG------------------------SizeHit CountTotal NormTotal
No Reads
dm3
----------------TTATACCCCTTACTCGTAGA------G-TAAAA-GGGT--AAACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAACGGA--------TAAATATTCTTGATCAGCATC---AATAGCTAAGTCGATCTGACCGTGTCC--------------------GCCT------------GTC----CGTAAGAA----------CGTCAACATCTCGGAAACTATAAAAGCTAGAAGG--TTCAGATTCCGCATATAGAGTCTA---------------------------GA-------GA--------------SizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................TCGGAAACTATAAAAGCTAGAAGG--TT..........................................................................26115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208300000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................T------------GTC----CGTAAGAA----------CGTCAACATCTCGGA.................................................................................................27113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000100030000000000000000000000000000000000000001000000000000000000000100000000020000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000
......................................................................................................................................................................................................................................................GTCAACATCTCGGAAACTATAAAAGC.....................................................................................2619.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000300000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................TCGGAAACTATAAAAGCTAGAAGG--T...........................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400200000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TCTCGGAAACTATAAAAGCTAGAAGG--T...........................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000010003100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TC---AATAGCTAAGTCGATCTGACCGTG................................................................................................................................................................................2616.0060000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AACTATAAAAGCTAGAAGG--TTCAGAT.....................................................................2616.0060000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AACTATAAAAGCTAGAAGG--TTCAGA......................................................................2525.50110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200200000000000000000000000000000000000000000000000000001000000000000010200000000000000000000000000000000000000000000000010000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................GCCT------------GTC----CGTAAGAA----------CGTCAACATC......................................................................................................2515.0050000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGCGTTTCCGACCATATAACGGA--------TA..............................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................T------------GTC----CGTAAGAA----------CGTCAACATCTCGG..................................................................................................2614.0040000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................TAACGGA--------TAAATATTCTTGATCAGCAGA---........................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TCAACATCTCGGAAACTATAAAAGC.....................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.....................................................................................................................................................................................TCC--------------------GCCT------------GTC----CGTAAGAA----------CGTCAACATC......................................................................................................2814.0040000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TCTCGGAAACTATAAAAGCTAGAAGG--............................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TAGCTAAGTCGATCTGACCGT.................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TCC--------------------GCCT------------GTC----CGTAAGAA----------CGTCAACA........................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000
................................................................................................................................................................................CCGTGTCC--------------------GCCT------------GTC----CGTAAGAA----------CG..............................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GCTAAGTCGATCTGACCGTGTCC--------------------GC.......................................................................................................................................................2513.0030000000000000000000000000000000000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................TCGTTG-------AAAAGTATGTAACAGGC......................................................................................................................................................................................................................................................................23202.755500000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000040010100003900000000000000000000000000
.................................................................TCGTTG-------AAAAGTATGTAACAGGCAGA...................................................................................................................................................................................................................................................................26202.1042000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000090010000000000000000000000000000000000000000000000000000000000000000000011000000017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................TTG-------AAAAGTATGTAACAGGCAGAAG.................................................................................................................................................................................................................................................................25202.054100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000020000000000000000000000000902007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AGGAAGCGTTTCCGACCATATAACG..........................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
...............................................................................................................................................................TAGCTAAGTCGATCTGAC....................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TAGCTAAGTCGATCTGACCGTGTCC--------------------G........................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TAAGTCGATCTGACCGTGTCC--------------------.........................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TAAGAA----------CGTCAACATCTCGGAAAC..............................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TAAGTCGATCTGACCGTGTCC--------------------GCCT------------.........................................................................................................................................2512.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AACATCTCGGAAACTATAAAAGCT....................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AACATCTCGGAAACTATAAAAGCTA...................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................TC----CGTAAGAA----------CGTCAACATCTCGG..................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................C---AATAGCTAAGTCGATCTGACCGTG................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................ATAGCTAAGTCGATCTGACCGTGT...............................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TAGCTAAGTCGATCTGACC...................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................GTCC--------------------GCCT------------GTC----CGTAAGAA----------CGT.............................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TGTCC--------------------GCCT------------GTC----CGTAAGAA----------CGTCAA..........................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CAACATCTCGGAAACTATAAAAGC.....................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................TCAACATCTCGGAAACTATAAAAGCT....................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GCTAGAAGG--TTCAGATTCCGCAT..............................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................CGTCAACATCTCGGAAACTATAAAAGC.....................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AACTATAAAAGCTAGAAGG--TTCAG.......................................................................2431.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.................................................................................................................................................................................................................................................................................AGAAGG--TTCAGATTCCGCATATAGA.........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TCAGCATC---AATAGCTAAGTCGATCTGA.....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................CTAAGTCGATCTGACCGTGTC..............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TAACGGA--------TAAATATTCTTGATCAGCT.............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GTC----CGTAAGAA----------CGTCAACATCTCGG..................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................TAAGAA----------CGTCAACATCTCGGAAACTA............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
--------------TGTTATACCCGTTACTCGTAGA------G-AAAAA-GGGA--ATAGTAGAATAGAGG-------AAAAGTATGCAACATGCAGAAGGACGCGTTTCCGACCATAAAAAGTA--------TATATATTCTTAATCAGGATC---AATTGCCGAGTCGGTCTAGCCGTGTCC--------------------------------------------GTATGAA----------CGTCGAGATCTCAGGAACTATAAAAGCTAGAATAGGTTGAGATACCGCATTCAGATTCTA---------------------------GA-------GA--------------SizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
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........................GTTACTCGTAGA------G-AAAAA-GGGA--ATAGT........................................................................................................................................................................................................................................................................................................2711.00100000010000000000
............................................................................................................................................................................CTAGCCGTGTCC--------------------------------------------GTATGAA----------C...............................................................................................................2011.00100100000000000000
................................................................ATAGAGG-------AAAAGTATGCAACATGCAGA...................................................................................................................................................................................................................................................................2711.00100000000000010000
...............................................................................................................................................................................GCCGTGTCC--------------------------------------------GTATGAA----------CGTCGAGATC......................................................................................................2611.00100000000010000000
....................................................................................................................................................AGGATC---AATTGCCGAGTCGGTCTA......................................................................................................................................................................................2411.00100000000000001000
..............................................................................AAAAGTATGCAACATGCAGAAGGACGCGTT.........................................................................................................................................................................................................................................................3011.00100000010000000000
.........................................................................................................................................................C---AATTGCCGAGTCGGTCTAGCCGTGT...............................................................................................................................................................................2611.00100010000000000000
..............................................................................................................................................TTAATCAGGATC---AATTGCCGAGTCGGTCA.......................................................................................................................................................................................2911.00100000000000010000
........................................................ATAGTAGAATAGAGG-------AAAAGTATGCAA...........................................................................................................................................................................................................................................................................2711.00100000000000010000
...............................................................................................................................................................................................................................................................TCAGGAACTATAAAAGCTAGAATAGGTA..........................................................................2811.00100000000000010000
..................................................................................................................................................TCAGGATC---AATTGCCGAGTCGGTCTAG.....................................................................................................................................................................................2711.00100000000000010000
................................................................................................................................................................................................................................................................CAGGAACTATAAAAGCTAGAATAGA............................................................................2511.00100000000000010000
.................................................................................................................................................................................CGTGTCC--------------------------------------------GTATGAA----------CGTCGAGATC......................................................................................................2411.00100000000000010000
..........................TACTCGTAGA------G-AAAAA-GGGA--ATAG.........................................................................................................................................................................................................................................................................................................2411.00100000000000010000
.................................................................TAGAGG-------AAAAGTATGCAACATGCAGAA..................................................................................................................................................................................................................................................................2711.00100000000000010000
.................................................................TAGAGG-------AAAAGTATGCAACATGC......................................................................................................................................................................................................................................................................2311.00100000000001000000
..............................................................................................................................................................................................................................................................CTCAGGAACTATAAAAGCTAGAATAGGT...........................................................................2811.00100000010000000000
..............................................................................AAAAGTATGCAACATGCAGAAGGACGC............................................................................................................................................................................................................................................................2711.00100000000001000000
................................TAGA------G-AAAAA-GGGA--ATA..........................................................................................................................................................................................................................................................................................................1711.00100000000001000000
.........................................................................................................................................................C---AATTGCCGAGTCGGTCTAGCCGT.................................................................................................................................................................................2411.00100000000001000000
................................................................ATAGAGG-------AAAAGTATGCAACATGC......................................................................................................................................................................................................................................................................2411.00100000000000010000
...............................................................................................................................................................................................................................................................TCAGGAACTATAAAAGCTAGAATAGGTT..........................................................................2811.00100000010000000000
.....................................................................................................................................................................................TCC--------------------------------------------GTATGAA----------CGTCGAGATCTCAGGAA...............................................................................................27200.8016000000000000160000
..........................................................................................................................GTA--------TATATATTCTTAATCAGGATC---AAT.....................................................................................................................................................................................................2750.60300110000100000000
...............................................................................................................................................................................GCCGTGTCC--------------------------------------------GTATGAA----------CG..............................................................................................................1820.50100010000000000000
................................................................................................................................................................................................................................................................CAGGAACTATAAAAGCTAGAA................................................................................21200.5010000000000000010000
............................................................................................................................................................................................................................................................ATCTCAGGAACTATAAAAGCTAGAATA..............................................................................2720.50100000000100000000
........................................................................................................................................................................................................................................................CGAGATCTCAGGAACTATAAAAGCT....................................................................................25200.40800800000000000000
..........................................................................................................................GTA--------TATATATTCTTAATCAGGATC---A.......................................................................................................................................................................................................2550.40200000000000020000
................TTATACCCGTTACTCGTAGA------G-AAAA.....................................................................................................................................................................................................................................................................................................................2530.33100000000100000000
.................TATACCCGTTACTCGTAGA------G-AAAAA-GG.................................................................................................................................................................................................................................................................................................................2730.33100000010000000000
...........................................................................................................................................................................................................................................................GATCTCAGGAACTATAAAAGCTAGA.................................................................................25200.25500050000000000000
........................................................................................................................................................................................................................................................CGAGATCTCAGGAACTATAAAAG......................................................................................23200.25500000000050000000
........................................................................................................................AAGTA--------TATATATTCTTAATCAGGA.............................................................................................................................................................................................................2440.25100000010000000000
..................................................................................................................................................................................GTGTCC--------------------------------------------GTATGAA----------CGT.............................................................................................................1690.22200000011000000000
........................................................................................................................................................................................................................................................CGAGATCTCAGGAACTATAAAAGCTA...................................................................................26200.20400000000004000000
................................................................................................................................................................................................................................................................CAGGAACTATAAAAGCTAGAAT...............................................................................22150.20300000000000012000
.............................................................................................GCAGAAGGACGCGTTT........................................................................................................................................................................................................................................................1660.17100000000001000000
...................................................................................................................................................................................TGTCC--------------------------------------------GTATGAA----------CGTCGAGATCTCAG..................................................................................................26200.15300100020000000000
...................................................................................................................................................................................TGTCC--------------------------------------------GTATGAA----------CGTCGAGATCTCAGGA................................................................................................28200.15300300000000000000
.....................................................................................................................................................................................TCC--------------------------------------------GTATGAA----------CGTCGAGATCTCAGG.................................................................................................25200.15301000000000002000
.......................................................................................................................................................................................................................................TGAA----------CGTCGAGATCTCAGGAACTATA..........................................................................................26200.15300010020000000000
.....................................................................................................................................................................................TCC--------------------------------------------GTATGAA----------CGTCGAGATCTCAGGA................................................................................................26200.15300200000001000000
...........................................................................................................TTCCGACCATAAAAAGTA--------TATATA..........................................................................................................................................................................................................................2470.14100000000010000000
...........................................................................................................................................................................................................................................................GATCTCAGGAACTATAAAAGCTAGAAT...............................................................................2780.13100000000001000000
.....................................................................................................................................................................................TCC--------------------------------------------GTATGAA----------CGTCGAGATCT.....................................................................................................21200.10220000000000000000
.....................................................................................................................................................................................TCC--------------------------------------------GTATGAA----------CGTCGAGATCTCAGGT................................................................................................26200.10200000000000020000
........................................................................................................................................................................................................................................................CGAGATCTCAGGAACTATAAAAGCC....................................................................................25200.10200000000200000000
...........................................................................................................................................................................................................................................................GATCTCAGGAACTATAAAAGCTAG..................................................................................24200.10200020000000000000
.....................................................................................................................................................................................TCC--------------------------------------------GTATGAA----------CGTCGAGATCTCAGGAAC..............................................................................................28200.10200000000200000000
..............TGTTATACCCGTTACTCGTAGA------G-.........................................................................................................................................................................................................................................................................................................................23110.09100000000100000000
............................................................................................................................A--------TATATATTCTTAATCAGGATC---AAC.....................................................................................................................................................................................................25120.08100000000000010000
..........................................................................................................................................ATTCTTAATCAGGATC---AAT.....................................................................................................................................................................................................19130.08100000000001000000
............................................................................................................................................................................................................................................................ATCTCAGGAACTATAAAAGCTAGA.................................................................................24200.05100000000100000000
........................................................................................................................................................................................................................................................CGAGATCTCAGGAACTATAAAAGCTAGA.................................................................................28200.05100000000000010000
.......................................................................................................................................TATATTCTTAATCAGG..............................................................................................................................................................................................................16200.05100000000010000000
......................................................................................................................................................................................................................................................GTCGAGATCTCAGGAACTATAAAAGC.....................................................................................26200.05100000000010000000
.....................................................................................................................................................................................TCC--------------------------------------------GTATGAA----------CGTCGAGATCTC....................................................................................................22200.05100000000100000000
.....................................................................................................................................................................................................................................TATGAA----------CGTCGAGATCTCAGGAACTA............................................................................................26200.05100100000000000000
....................................................................................................................................................................................GTCC--------------------------------------------GTATGAA----------CGTCGAGATCTCAGG.................................................................................................26200.05100000001000000000
.......................................................................................................................................................................................................................................TGAA----------CGTCGAGATCTCAGGAACTAT...........................................................................................25200.05100000000100000000
...................................................................................................................................................................................TGTCC--------------------------------------------GTATGAA----------CGTCGAGATC......................................................................................................22200.05100000010000000000
..........................................................................................................................................................................................................................................A----------CGTCGAGATCTCAGGAAC..............................................................................................19200.05110000000000000000
............................................................................................................................................................................................................................................................ATCTCAGGAACTATAAAAGCTA...................................................................................22200.05100000000001000000
...........................................................................................................................................................................................................................................................GATCTCAGGAACTATAAAAGCT....................................................................................22200.05100000010000000000
.......................................................................................................................................................................................................................................................TCGAGATCTCAGGAACTATAAAAG......................................................................................24200.05100000000001000000
droSec2
----------------TTATACCCGTTACTTGTAGA------G-CGAAATGGGA--ATACTAGATTCGTTG-------AAAAGTATGTAACAGGTAGAAGGAAGCGTTTCCCACCATAAAAAGTA--------AATATATTCTTGATCGAGATC---ACTAGACGAGTCGACCTGGCCACATCG--------------------GTCTGTCACTC----CGTC----CGTATGAA----------CGTCGGGATCTCAGGTACTATAAAAGCTAGAATA--TTAATATTT-TCATGCAGCTTCCA---------------------------GA-----------------------SizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
................................................................................................................................................................................CCACATCG--------------------GTCTGTCACTC----CG........................................................................................................................................2111.0010001
................................................................TTCGTTG-------AAAAGTATGTAACAGGT......................................................................................................................................................................................................................................................................24200.2044000
................................................................TTCGTTG-------AAAAGTATGTAACAGGTA.....................................................................................................................................................................................................................................................................25180.1733000
..................................................................CGTTG-------AAAAGTATGTAACAGGTAGA...................................................................................................................................................................................................................................................................25190.0510001
................................................................TTCGTTG-------AAAAGTATGTAACAGGTAGT...................................................................................................................................................................................................................................................................27190.0511000
..........................................................................................CAGGTAGAAGGAAGCGTTTCC......................................................................................................................................................................................................................................................21200.0510100
................................................................TTCGTTG-------AAAAGTATGTAACAGG.......................................................................................................................................................................................................................................................................23200.0510001
........................................................ATACTAGATTCGTTG-------AAAAGT.................................................................................................................................................................................................................................................................................21200.0511000
droYak3
----------C--TTTTTATACACATTACTCGTAGA------G-TAA-A-GGGT--ATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTA--------CATATATTCTTGATCAGGAAC---AATAGCCGAGTCGATCTGGCCATGTCC--------------------GTCTGTCCGT--------C----CGTATGAA----------CGTCGAGATCTCAGGAACTACAAAAGCTAGAAAG--CTGAGATTCAGCATACAGACTCCA---------------------------GA-------A---------------SizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
.............................TCGTAGA------G-TAA-A-GGGT--ATACTAGA.....................................................................................................................................................................................................................................................................................................2490.11101000000000
.............................................................................................................................................................................................................TCTGTCCGT--------C----CGTATGAA----------CGTCGAGA........................................................................................................26200.10200020000000
.....................................................................................................................................................GGAAC---AATAGCCGAGTCGATCTGGCC...................................................................................................................................................................................26190.05100100000000
........................................................................................................................................ATATTCTTGATCAGGAAC---AATAGCC.................................................................................................................................................................................................25200.05100010000000
............................................................................................................................................TCTTGATCAGGAAC---AATAGCCGAGT.............................................................................................................................................................................................25200.05100100000000
.................................................................................................................................................ATCAGGAAC---AATAGCCGAGTC............................................................................................................................................................................................21200.05100000100000
...........................................................................................................................................TTCTTGATCAGGAAC---AATAGCC.................................................................................................................................................................................................22200.05100100000000
................................................................................AAGTATGTAACAGGCAGAAGGA...............................................................................................................................................................................................................................................................22200.05100000000001
...............................................................................AAAGTATGTAACAGGCAGA...................................................................................................................................................................................................................................................................19200.05100000100000
..................................................................................................................................................................CCGAGTCGATCTGGCCATGTCC--------------------GTCTGTC..................................................................................................................................................29200.05100100000000
...........................................................................................................................................TTCTTGATCAGGAAC---AATAGCCGAGT.............................................................................................................................................................................................26200.05100100000000
.................................................................................................................................................................GCCGAGTCGATCTGGCCATGTCC--------------------GT.......................................................................................................................................................25200.05100100000000
droEre2
----------------TTATATCCATTACTCATAGA------G-TAAGA-GGGT--ATACTAGATTCGTTG-------AAAAGTATGTAACACGCAGAAGGAAACGTTTCCGACCATATAAAGTA--------TATATATTCTTGATCAGCATC---AATAGCCGAGTCGATCTAGCCATGTCC--------------------GT--GTCCGTCCGTCTGTC----CGATAGAA----------CGCCTCGATCTCAGAAACTACAAAAGCTAGA---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
............................................................................................................................................TCTTGATCAGCATC---AATAGCCGAGTCG...........................................................................................................................................................................................2770.5744000000
..............................................................................................................................................TTGATCAGCATC---AATAGCCGAGT.............................................................................................................................................................................................23110.2733000000
....................................................................................................................................................................................................................GTCCGTCTGTC----CGATAGAA----------CGC.............................................................................................................2240.2510100000
............................................................................................................................................TCTTGATCAGCATC---AATAGCCGAGT.............................................................................................................................................................................................2590.2222000000
............................................................................................................................................TCTTGATCAGCATC---AATAGCCGAG..............................................................................................................................................................................................2490.2222000000
..............................................................................................................................................TTGATCAGCATC---AATAGCCGAGTCGA..........................................................................................................................................................................................2680.1311000000
.............................................................................................................................................CTTGATCAGCATC---AATAGCCGAGT.............................................................................................................................................................................................24100.1011000000
..............................................................................................................................................TTGATCAGCATC---AATAGCCGAGTCGC..........................................................................................................................................................................................26100.1011000000
..............................................................................................................................................TTGATCAGCATC---AATAGCCGAG..............................................................................................................................................................................................22110.0911000000
..............................................................................................................................................TTGATCAGCATC---AATAGCCGA...............................................................................................................................................................................................21120.0811000000
........................................................................................................................................................................................................................................GAA----------CGCCTCGATCTCAGAAACT.............................................................................................22170.0610000010
................................................................................................................................................GATCAGCATC---AATAGCCGAGC.............................................................................................................................................................................................21200.0510100000
..................................................GGGT--ATACTAGATTCGTTG-------AAAAGT.................................................................................................................................................................................................................................................................................25200.0510100000

Generated: 05/18/2015 at 06:01 AM