ID:

dps_3024

 Coordinate:

XR_group6:3895065-3895215 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.7 -7.6 -7.4

Flybase annnotation

exon [dpse_GLEANR_12520:9]; CDS [Dpse\GA23548-cds]; intron [Dpse\GA23548-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGAATTGGGTGATTGATACCCTCCTACTTGTCCCAGGAATAAGTTATATTTCCTTGGCAATAGGAAAGAGGTCTGGCAGTTGTTACCACAATACGTGATGCATGTAAAGTTTTCAATCTGATTTGACTGTTGTGGAATATCATTTTTTGTATCTTAATTTGAAGAATTGTGTAAAGTGAGATTTTCTTAAATACTTTGCAGTGACTGTCGGTTGCTTGGTGCTGCATCAGCGGTACAAGAAACGCTACGAG
******************************************************........(((..((((.((.(((...(((((........)))))...)))..)).))))..)))....******************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM343916
embryo
 M062
head
 SRR902012
CNS imaginal disc
 V112
male body		 GSM444067
head
..........GATTGATACCCTCCTACTTGTCCCAGGA..................................................................................................................................................................................................................... 28 0 1 13.00 13 12 1 0 0 0 0 0
.......................................................................................................GTAAAGTTTTCAATCTGATT................................................................................................................................ 20 0 1 12.00 12 8 2 2 0 0 0 0
..........GATTGATACCCTCCTACTTGTCCCAGG...................................................................................................................................................................................................................... 27 0 1 12.00 12 10 2 0 0 0 0 0
..........GATTGATACCCTCCTACTTGTCCC......................................................................................................................................................................................................................... 24 0 1 7.00 7 6 1 0 0 0 0 0
..........GATTGATACCCTCCTACTTGTCCCAG....................................................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0 0 0
.........................................................................................................AAAGTTTTCAATCTGATTT............................................................................................................................... 19 0 1 3.00 3 1 0 2 0 0 0 0
.......................................................................................................GTAAAGTTTTCAATCTGATTT............................................................................................................................... 21 0 1 2.00 2 1 0 1 0 0 0 0
...................................................................................TACCACAATACGTGATGCATGT.................................................................................................................................................. 22 0 1 2.00 2 1 0 1 0 0 0 0
......................................................TGGCAATAGGAAAGAGGT................................................................................................................................................................................... 18 0 1 2.00 2 0 0 2 0 0 0 0
........................................................................................................TAAAGTTTTCAATCTGATTT............................................................................................................................... 20 0 1 2.00 2 0 1 1 0 0 0 0
....................................................................................................CATGTAAAGTTTTCAATCTGATT................................................................................................................................ 23 0 1 2.00 2 0 1 0 1 0 0 0
.......................................................................................................GGAAAGTTTTCAATCTGATT................................................................................................................................ 20 1 1 2.00 2 0 2 0 0 0 0 0
.............................................ATATTTCCTTGGCAATAGGAAAGA...................................................................................................................................................................................... 24 0 1 2.00 2 1 0 1 0 0 0 0
...................................................................................TACCACAATACGTGATGCATGTAAAGT............................................................................................................................................. 27 0 1 2.00 2 1 1 0 0 0 0 0
...................................................CCTTGGCAATAGGAAAGAGGT................................................................................................................................................................................... 21 0 1 2.00 2 0 0 1 0 1 0 0
................................................................................................GATGCATGTAAAGTTTTCAATCTGATT................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0
...................................................................................................GCATGTAAAGTTTTCAATCTGATT................................................................................................................................ 24 0 1 2.00 2 1 0 0 1 0 0 0
........................................................................CTGGCAGTTGTTACCACAATACGTGAT........................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................GTAAAGTTTTCAATCTGATTTGAA............................................................................................................................ 24 1 1 2.00 2 1 0 1 0 0 0 0
..............GATACCCTCCTACTTGTCCCAGGA..................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0
................................................................................................GATGCATGTAAAGTTTTCAATCTGATTT............................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................CAAGTTCAGTTTTCAATCTGAT................................................................................................................................. 22 3 1 1.00 1 0 0 1 0 0 0 0
.................................................TTCCTTGGCAATAGGAAAGAGGT................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0 0
............TTGATACCCTCCTACTTGTCCCAGGA..................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................GACTGTCGGTTGCTTGGTGCT............................ 21 0 1 1.00 1 0 0 0 0 0 1 0
...........ATTGATACCCTCCTACTTGTCCCAGGA..................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..........GATTGATACCCTCCTACTTGTC........................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................ACTGTCGGTTGCTTGGGGGTGCATCA...................... 26 2 1 1.00 1 0 0 1 0 0 0 0
.............................................ATATTTCCTTGGCAATAGGAAAG....................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................GAGGACTGGCAGTTGTTACCACAATAC............................................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0
..........................................................AATAGGAAAGAGGTCTGGC.............................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
...........ATTGATACCCTCCTACTT.............................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0 0
...................................................CCTTGGCAATAGGAAAGAGGTCTGGC.............................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0
............................................................................................ACGTGATGCATGTAAAGTTTTCAA....................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0
...................................................CCTTGGCCATAGGAAAGAGGTCTGGC.............................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0 0 0
......................................ATAAGTTATATTTCCTTGGCAATAG............................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................TCATGTAAAGTTTTCAATCTGATT................................................................................................................................ 24 1 1 1.00 1 0 0 0 1 0 0 0
.......................................................................................................GAAAAGTTTTCAATCTGATTT............................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
................................................................................................GGTGCATGTAAAGTTTTCAATCTGATT................................................................................................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0
..............GATACCCTCCTACTTGTCCC......................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................TGTAAAGTTTTCAATCTGAGTT............................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0
.............................................................................................................................................................................................................TGTCGGTTGCTTGGTGCTGCA......................... 21 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................TCAATCTGATTTGACTGTTGTGG.................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
............TTGATACCCTCCTACTTGTCCCA........................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
..........GGTTGATACCCTCCTACTTGTCCCAGG...................................................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................GGGACTGTCGGTTGCTTGGTG.............................. 21 1 1 1.00 1 0 1 0 0 0 0 0
..........GATTGATACCCTCCTACTT.............................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0
..............GATACCCTCCTACTTGTCCCAGG...................................................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................AGGGAAAGTTTTCAATCTGATTT............................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0
......................................................TGGCAATAGGAAAGAGGTCTGG............................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0
.......................................................................................................GTAAAGGTTTCAATCTTATTT............................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0
.......................................................................................ACAATACGTGATGCATGT.................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0 0
...........ATTGATACCCTCCTACTTGTCCC......................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
.........GGATTGATACCCTCCTACTTGTCCC......................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0
....................................................CTTGGCAATAGGAAAGAG..................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................ATACGTGATGCATGTAAAGTT............................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 1
......................................................TGGCAATAGGAAAGAGGTCTGGC.............................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0 0 0
...............................................ATTTCCTTGGCAATAGGAAAGAGGT................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
....................................................CTTGGCAATAGGAAAGAGGT................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0
........GTGATTGATACCCTCCTACTTGTGCCAGG...................................................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................TACCACAATACGTGATGCATGTAAAGTTT........................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................................CAATACGTGATGCATGTAAAGTC............................................................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0 0
............TTGATACCCTCCTACTTGTCCCAGG...................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................AATACGTGATGCATGTAAAGTTTTC......................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................GGCAATAGGAAAGAGGTCTGGCA............................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0
.........................................................................................AATACGTGATGCATGTAAAGT............................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 1 0
....................................................CTTGGCAATAGGAAAGAGGTCT................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTGGCAATAGGAAAGAGGTCTGGCAGTT.......................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................ATGTAAAGTTTTCAATCTGATT................................................................................................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0
........GTGATTGATACCCTCCTACTTGTCCC......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................TTGGCAATAGGAAAGAGGT................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................TCAATCTGATTTGACTGTTGAAA.................................................................................................................... 23 3 2 0.50 1 0 0 0 1 0 0 0
............................................................TACGAAAGGGGTCTGGCAG............................................................................................................................................................................ 19 2 10 0.10 1 1 0 0 0 0 0 0
.............................................................................................................................................................................AAGTGCGATTTTCTTAAG............................................................ 18 2 11 0.09 1 0 0 1 0 0 0 0
...........................................................................................................................................................AATCTGGACAATTGTGTAAA............................................................................ 20 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

TCTTAACCCACTAACTATGGGAGGATGAACAGGGTCCTTATTCAATATAAAGGAACCGTTATCCTTTCTCCAGACCGTCAACAATGGTGTTATGCACTACGTACATTTCAAAAGTTAGACTAAACTGACAACACCTTATAGTAAAAAACATAGAATTAAACTTCTTAACACATTTCACTCTAAAAGAATTTATGAAACGTCACTGACAGCCAACGAACCACGACGTAGTCGCCATGTTCTTTGCGATGCTC
********************************************************************************************************************************........(((..((((.((.(((...(((((........)))))...)))..)).))))..)))....****************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM444067
head
 M040
female body
...................................................................CTCCAGACCGTCGACAAGGTT................................................................................................................................................................... 21 3 5 0.20 1 1 0
.........................................TCAAGCTAAAGGAACCGTTG.............................................................................................................................................................................................. 20 3 17 0.06 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:3895015-3895265 - dps_3024 AGAATTGGGTGATTGATACCCTCCTACTTGTC-CCAGGAATAAGTTATATTTCCTTGGCAATAGGAAAGAGGTCTGGCAGTTGTTACCACAATACGTGATGCATGTAAAGTTTTCAATCTGATTTGACTGT----------------------TG--------TGGAA-TATCATT------------TTTTGTATCTTAATTTGAAGAATTGTGTAAAG---------------------------------TGAGATTTT------------C---------------T--TAAA-----T-ACTTTGCAGTGACTGTCGGTTGCTTGGTGCTGCATCAGCGGTACAAGAAACGCTACGAG
droPer2 scaffold_9:2186647-2186896 - dpe_2167 AAAAGTGGGTAGTTGATACCCTCCTACTTGGCCCCAGGAATAAGTTATATTTCCTTGGCAATAGGAAAGAGGCCTGGCAGTTGTTACCACAATACGTGATGCATGTAAAGTTTTCAATCTGATTTGGCTGT----------------------TG--------TAAAA-TAT--TTTATT------------TTATCTTAATTTGAAGAATTTTGTAAAG---------------------------------TTAGATTTT------------C---------------T--TAAA-----T-ATTTTGCAGTGACTGTCGGTTGCTTGGTGCTGCATCAGCGGTACAAGAAACGCTACGAG
droWil2 scf2_1100000004762:1451217-1451274 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAAGTCACTGTGGGCTGTTTGGTTCTCCATCAACGTTATAAGAAACGCTACGAG
droVir3 scaffold_13049:6828918-6829058 - ------------------------------------------------------------------------------------------------TGATGCACCCAAAGTTTTCAATCTGAATACAAATT----------------------TG--------GCAGA-A----CCCA-------------------------------------------------------------------------------------AGTTTTCGCTGGTTGTTCAAAATCTAAT--CTAA-TT--G-CTTTTACAGTTACCGTGGGCTGCCTCGTGCTGCATCAACGCTACAAGAAGCGCTACGAA
droMoj3 scaffold_6680:5146356-5146496 - ------------------------------------------------------------------------------------------------TGATGCATTCAAAGTTTTCAATCTGATTCTAAAAC----------------------T----------TAAGATAA--GC------------AACAGAGT-----------------TTTGTT----------------------------------------------------------ATCATAAATCTAAT--TGAATCA--A-ATTTTACAGTTACTGTGGGTTGTCTCGTGCTGCATCAACGTTATAAGAAGCGCTATGAA
droGri2 scaffold_15110:5978563-5978622 + ------------------------------------------------------------------------------------------------TAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAGTTACTGTGGGCTGCTTGGTGCTGCATCAACGCTACAAGAAGCGCTATGAA
droAna3 scaffold_13337:14323421-14323602 + A-----------------------------------------------------------------AAAAGGTCTGTCCGGTTACG-------AAATGATTCACTCAAAGTTTTCAATCTGATAAAGCGCTTCACAAAATGCACATTGTACACCTCTTGCTAT---------GT-ATATATTAAAATATT----------------------------------------------------------------------CCTTG---------T---------------T--TTCATTT--T-ATTTTGTAGTAACCGTGGGCTGCCTGGTGCTACATCAGCGTTACAAAAAACGCTATGAA
droBip1 scf7180000396641:963851-964029 - ----------------------------------------------------------------GAAAAAGGTCTGCCAGGTTACA-------AAATGATTCCCTCAAAGTTTTCAATCTGATAAAGCTCCGTAAAGAATTCCCAT-----ACCTTTGTCTAT---------GT-ATATATTAAAATATT----------------------------------------------------------------------CTGTA---------T---------------T--TTAATTT--TATTTTTTTAGTAACCGTGGGCTGCCTGGTGCTACATCAGCGTTACAAGAAACGCTATGAA
droKik1 scf7180000302351:277851-278009 - ------------------------------------------------------------------------------------------------TGATGCTTGTGAAGTTTTCAATCTGATTTTATATG----------------------TA--------TTTAATTAA--TT------------AACTATAT-----------------TTTAACTTAATAATTTCTT-AACTAATCTTAA--------TCA------------------T---------------T--TCCTTTT--T-TAATTCTAGTCACCGTAGGCTGTTTGGTTTTGCATCAACGTTATAAGAAACGCTATGAA
droFic1 scf7180000454107:1201553-1201704 + ------------------------------------------------------------------------------------------------TGATGCGTATAAAGTTTTCAATCTGAAATAATTAC----------------------TG--------TTAGG-AAT--TGAATGCA---------------------------------------------GGTTTTTAATATAGTTTT----AAACTAATATTCT--------------------------------ACATTTAAT-ACGTTTCAGTCACTGTTGGTTGTTTGGTGCTGCATCAGCGTTATAAGAAACGCTACGAA
droEle1 scf7180000490993:546997-547150 + ------------------------------------------------------------------------------------------------TGATGCGTCAAAAGTTTTCAATCTGATAAAACAAC----------------------TT--------TTATG-AAT--TCTATGAA---------------------------------------------TTTCTTTCCTTAAATTTA----ACACTTATATCTTT-----------A---------------A--ATAATTT--T-ACATTTCAGTCACTGTTGGTTGCTTGGTCCTGCATCAGCGTTATAAGAAACGCTACGAA
droRho1 scf7180000778631:11079-11234 + ------------------------------------------------------------------------------------------------TGATGCGTGAAAAGTTTTCAATCTGATATAATCTT----------------------TG--------ACAAG-GAT--TTTATTAA---------------------------------------------CGTGTTTCATAAAGATTA----AGACTTATATCCTATT---------T---------------T--TTCAATT--T-AATTTTCAGTCACTGTTGGATGCTTAGTCCTGCATCAGCGTTATAAGAAACGCTTCGAA
droBia1 scf7180000302193:922857-923006 + ------------------------------------------------------------------------------------------------TGATGCGTGTAAAGTTTTCAATCTGATGTCATTTC----------------------TA--------CAAAA---G--TTTGTGAA---------------------------------------------AATATTTCATAAAATTGG----TAGCTAATATTCTT-----------T---------------G--TAAAT----T-AATTTTCAGTCACCGTTGGCTGCTTGGTGCTGCATCAGCGTTACAAGAAACGCTACGAA
droTak1 scf7180000415409:386675-386841 + A-------------------------------------------------------------------AAGATCTGCCAGGTG-TA-------CAATGATGCGTCAAAAGTTTTCAATCTGATAATTGAGA----------------------AG--------TTGAG-AAG--TTCGTGAA---------------------------------------------ACTCTTTTATAACATAAT----TAACAGATATATT--------------------------------TCA-------TTTTTTTAGTTACTGTCGGCTGCTTGGTGCTGCATCAGCGTTATAAGAAACGCTACGAA
droEug1 scf7180000409471:1943256-1943406 - ------------------------------------------------------------------------------------------------TGATGTGTCAAAAGTTTTCAATCTGATTTAATTTC----------------------TC--------TTAAG-AAC--TTTATGAA---------------------------------------------TTTCT-ACCTCAGTTTTATCACTAACTCGTATT------------------------------AATTACA-------TTTTTTCAGTTACTGTTGGTTGCTTGGTGCTGCATCAGCGTTATAAGAAACGCTACGAA
dm3 chr3L:17621276-17621428 + ------------------------------------------------------------------------------------------------TGATGTACCAAAAGTTTTCAATCTGATACAATTAA----------------------TGTTTCTTAT---------CT-CTATATAATCATATATAATG------------------TTTAAAC---------------------------------CTATATCCTG-----------C---------------C--TACATTT--A-ATTTTCTAGTAACCGTTGGCTGTTTGGTGCTGCATCAGCGTTATAAGAAACGATACGAA
droSim2 3l:17212084-17212236 + ------------------------------------------------------------------------------------------------TGATGTACCAAAAGTTTTCAATCTGATACAATCAA----------------------TGTTTCTTAT---------CT-CTATATAATCATATTTAATG------------------TTTAAAC---------------------------------TCATATCCTG-----------C---------------C--TACATTT--A-AATTTCCAGTAACCGTCGGCTGTTTGGTGCTGCATCAGCGTTATAAGAAACGCTACGAA
droSec2 scaffold_0:9667620-9667772 + ------------------------------------------------------------------------------------------------TGATGTAACAAAAGTTTTCAATCTGATACAATCAA----------------------TGTTTCTTAT---------CT-CTATATTATCATATTTAATG------------------TGTAAAC---------------------------------TTATATCCTG-----------C---------------C--TACATTT--A-ATTTTCCAGTAACCGTCGGCTGTTTGGTGCTGCATCAGCGTTATAAGAAACGCTACGAA
droYak3 3L:16434209-16434385 - ----------------------------------------------------------------------GGTCTGACAGGTCCTA-------AAATGATGCACCAAAAGTTTTCAATCTGATATAATCAA----------------------AGTTTGCTAT---------CT-CTATATTATTATAAACAATGT-----------------GTTAAGCTAAT-------------------------------ACATTTAG-----------GCT-------------G--TACATTT--A-ATTTTCCAGTAACCGTTGGCTGTTTGGTGCTGCATCAGCGATATAAGAAACGCTACGAA
droEre2 scaffold_4784:16233016-16233207 - ---------------------------------------------------TCCTGAGCTATCCTATAGGGGCCTGACAGGTCCTA-------AAATGATGCACCAAAAGTTTTCAATCTGATATAATCAA----------------------TGATTATTAC---------CT-GCATATAATCATGTACAATGT-----------------TTTAAAC---------------------------------TAATATACTG-----------C---------------C--TACATTT--T-ATTTTCCAGTAACCGTTGGCTGCTTGGTGCTGCACCAGCGATATAAGAAACGCTACGAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGAATTGGGTGATTGATACCCTCCTACTTGTC-CCAGGAATAAGTTATATTTCCTTGGCAATAGGAAAGAGGTCTGGCAGTTGTTACCACAATACGTGATGCATGTAAAGTTTTCAATCTGATTTGACTGT----------------------TG--------TGGAA-TATCATT------------TTTTGTATCTTAATTTGAAGAATTGTGTAAAG---------------------------------TGAGATTTT------------C---------------T--TAAA-----T-ACTTTGCAGTGACTGTCGGTTGCTTGGTGCTGCATCAGCGGTACAAGAAACGCTACGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........GATTGATACCCTCCTACTTGTC-CCAGGA....................................................................................................................................................................................................................................................................................................................................28113.001301210000000
........................................................................................................GTAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................20112.00120820200000
..........GATTGATACCCTCCTACTTGTC-CCAGG.....................................................................................................................................................................................................................................................................................................................................27112.001201020000000
..........GATTGATACCCTCCTACTTGTC-CC........................................................................................................................................................................................................................................................................................................................................2417.0070610000000
..........GATTGATACCCTCCTACTTGTC-CCAG......................................................................................................................................................................................................................................................................................................................................2614.0040400000000
..........................................................................................................AAAGTTTTCAATCTGATTT..............................................................................................................................................................................................................................................1913.0030100200000
........................................................................................................GTAAAGTTTTCAATCTGATTT..............................................................................................................................................................................................................................................2112.0020100100000
....................................................................................TACCACAATACGTGATGCATGT.................................................................................................................................................................................................................................................................2212.0020100100000
.......................................................TGGCAATAGGAAAGAGGT..................................................................................................................................................................................................................................................................................................1812.0020000200000
.........................................................................................................TAAAGTTTTCAATCTGATTT..............................................................................................................................................................................................................................................2012.0020010100000
.....................................................................................................CATGTAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2312.0020011000000
..............................................ATATTTCCTTGGCAATAGGAAAGA.....................................................................................................................................................................................................................................................................................................2412.0020100100000
....................................................................................TACCACAATACGTGATGCATGTAAAGT............................................................................................................................................................................................................................................................2712.0020110000000
....................................................CCTTGGCAATAGGAAAGAGGT..................................................................................................................................................................................................................................................................................................2112.0020000100001
.................................................................................................GATGCATGTAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2712.0020200000000
....................................................................................................GCATGTAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2412.0020101000000
.........................................................................CTGGCAGTTGTTACCACAATACGTGAT.......................................................................................................................................................................................................................................................................2712.0020200000000
........................................................................................................GTAAAGTTTTCAATCTGATTTGAA...........................................................................................................................................................................................................................................2412.0020100100000
..............GATACCCTCCTACTTGTC-CCAGGA....................................................................................................................................................................................................................................................................................................................................2412.0020200000000
.................................................................................................GATGCATGTAAAGTTTTCAATCTGATTT..............................................................................................................................................................................................................................................2811.0010010000000
..................................................TTCCTTGGCAATAGGAAAGAGGT..................................................................................................................................................................................................................................................................................................2311.0010000000001
............TTGATACCCTCCTACTTGTC-CCAGGA....................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................GACTGTCGGTTGCTTGGTGCT............................2111.0010000001000
...........ATTGATACCCTCCTACTTGTC-CCAGGA....................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..........GATTGATACCCTCCTACTTGTC-..........................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................ATATTTCCTTGGCAATAGGAAAG......................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................................................AATAGGAAAGAGGTCTGGC.............................................................................................................................................................................................................................................................................................1911.0010100000000
...........ATTGATACCCTCCTACTT..............................................................................................................................................................................................................................................................................................................................................1811.0010100000000
....................................................CCTTGGCAATAGGAAAGAGGTCTGGC.............................................................................................................................................................................................................................................................................................2611.0010010000000
.............................................................................................ACGTGATGCATGTAAAGTTTTCAA......................................................................................................................................................................................................................................................2411.0010000100000
.......................................ATAAGTTATATTTCCTTGGCAATAG...........................................................................................................................................................................................................................................................................................................2511.0010010000000
..............GATACCCTCCTACTTGTC-CC........................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................TGTCGGTTGCTTGGTGCTGCA.........................2111.0010100000000
.................................................................................................................TCAATCTGATTTGACTGT----------------------TG--------TGG.....................................................................................................................................................................................................2311.0010100000000
............TTGATACCCTCCTACTTGTC-CCA.......................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........GATTGATACCCTCCTACTT..............................................................................................................................................................................................................................................................................................................................................1911.0010010000000
..............GATACCCTCCTACTTGTC-CCAGG.....................................................................................................................................................................................................................................................................................................................................2311.0010010000000
.......................................................TGGCAATAGGAAAGAGGTCTGG..............................................................................................................................................................................................................................................................................................2211.0010000100000
........................................................................................ACAATACGTGATGCATGT.................................................................................................................................................................................................................................................................1811.0010000100000
...........ATTGATACCCTCCTACTTGTC-CC........................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....................................................CTTGGCAATAGGAAAGAG....................................................................................................................................................................................................................................................................................................1811.0010000100000
...........................................................................................ATACGTGATGCATGTAAAGTT...........................................................................................................................................................................................................................................................2111.0010000010000
.......................................................TGGCAATAGGAAAGAGGTCTGGC.............................................................................................................................................................................................................................................................................................2311.0010010000000
................................................ATTTCCTTGGCAATAGGAAAGAGGT..................................................................................................................................................................................................................................................................................................2511.0010000100000
.....................................................CTTGGCAATAGGAAAGAGGT..................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................................................................TACCACAATACGTGATGCATGTAAAGTTT..........................................................................................................................................................................................................................................................2911.0010010000000
.........................................................................................CAATACGTGATGCATGTAAAGTC...........................................................................................................................................................................................................................................................2311.0010010000000
............TTGATACCCTCCTACTTGTC-CCAGG.....................................................................................................................................................................................................................................................................................................................................2511.0010010000000
..........................................................................................AATACGTGATGCATGTAAAGTTTTC........................................................................................................................................................................................................................................................2511.0010010000000
........................................................GGCAATAGGAAAGAGGTCTGGCA............................................................................................................................................................................................................................................................................................2311.0010000100000
..........................................................................................AATACGTGATGCATGTAAAGT............................................................................................................................................................................................................................................................2111.0010000001000
.....................................................CTTGGCAATAGGAAAGAGGTCT................................................................................................................................................................................................................................................................................................2211.0010100000000
......................................................TTGGCAATAGGAAAGAGGTCTGGCAGTT.........................................................................................................................................................................................................................................................................................2811.0010100000000
......................................................................................................ATGTAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2211.0010001000000
........GTGATTGATACCCTCCTACTTGTC-CC........................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................TTGGCAATAGGAAAGAGGT..................................................................................................................................................................................................................................................................................................1911.0010100000000
.................................................................................................................TCAATCTGATTTGACTGT----------------------TG--------AAA.....................................................................................................................................................................................................2320.5010001000000
droPer2
AAAAGTGGGTAGTTGATACCCTCCTACTTGGCCCCAGGAATAAGTTATATTTCCTTGGCAATAGGAAAGAGGCCTGGCAGTTGTTACCACAATACGTGATGCATGTAAAGTTTTCAATCTGATTTGGCTGT----------------------TG--------TAAAA-TAT--TTTATT------------TTATCTTAATTTGAAGAATTTTGTAAAG---------------------------------TTAGATTTT------------C---------------T--TAAA-----T-ATTTTGCAGTGACTGTCGGTTGCTTGGTGCTGCATCAGCGGTACAAGAAACGCTACGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................GTAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2017.007250000
........GTAGTTGATACCCTCCTACTTGGCCCCAG......................................................................................................................................................................................................................................................................................................................................2916.006600000
..........................................................................................................................................................................................................................................................................................................................GACTGTCGGTTGCTTGGTGCTG...........................2214.004400000
..................................................................................GTTACCACAATACGTGATGCATG..................................................................................................................................................................................................................................................................2312.002020000
........GTAGTTGATACCCTCCTACTTGGCCC.........................................................................................................................................................................................................................................................................................................................................2612.002200000
.......................................................................................CACAATACGTGATGCATGTAAAGT............................................................................................................................................................................................................................................................2412.002011000
..........................................................................................................................................................................................................................................................................................................................GACTGTCGGTTGCTTGGT...............................1812.002200000
........GTAGTTGATACCCTCCTACTTGGCCCCA.......................................................................................................................................................................................................................................................................................................................................2812.002200000
..............................................................................................................................................................................................................................................................................................................T-ATTTTGCAGTGACTGTC..........................................1812.002200000
.....................................................................................ACCACAATACGTGATGCATGT.................................................................................................................................................................................................................................................................2111.001001000
..............................................ATATTTCCTTGGCAATAGGAAAG......................................................................................................................................................................................................................................................................................................2311.001010000
.................ACCCTCCTACTTGGCCCCAGGA....................................................................................................................................................................................................................................................................................................................................2211.001010000
........................................................GGCAATAGGAAAGAGGCCTGGCAGT..........................................................................................................................................................................................................................................................................................2511.001000001
..........................................................................................................................................................................................................................................................................................................................GACTGTCGGTTGCTTGGC...............................1811.001100000
......................................................................................................ATGTAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2211.001000100
.............................................................TAGGAAAGAGGCCTGGCAGTTGTTACC...................................................................................................................................................................................................................................................................................2711.001000001
....................................................................................TACCACAATACGTGATGCAT...................................................................................................................................................................................................................................................................2011.001010000
...........................................................................................ATACGTGATGCATGTAAAGT............................................................................................................................................................................................................................................................2011.001000010
..................................................TTCCTTGGCAATAGGAAAGAGGC..................................................................................................................................................................................................................................................................................................2311.001000001
........................................................................................................GTAAAGTTTTCAATCTGATTT..............................................................................................................................................................................................................................................2111.001001000
....................................................................................TACCACAATACGTGATGCATGTAAAGT............................................................................................................................................................................................................................................................2711.001001000
..........................................................................................................AAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................1811.001010000
................................................ATTTCCTTGGCAATAGGAAAGAGGCCTG...............................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................CATGTAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2311.001010000
..........AGTTGATACCCTCCTACTTGGCCCCAG......................................................................................................................................................................................................................................................................................................................................2711.001010000
.................................................................................................GATGCATGTAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2711.001010000
.................ACCCTCCTACTTGGCCCCA.......................................................................................................................................................................................................................................................................................................................................1911.001010000
..........AGTTGATACCCTCCTACTTGGCCC.........................................................................................................................................................................................................................................................................................................................................2411.001010000
..................................................................................................ATGCATGTAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2611.001010000
........GTAGTTGATACCCTCCTACTTGGCC..........................................................................................................................................................................................................................................................................................................................................2511.001100000
..............GATACCCTCCTACTTGGCCCCAGGA....................................................................................................................................................................................................................................................................................................................................2511.001010000
........GTAGTTGATACCCTCCTACTTGGCCCC........................................................................................................................................................................................................................................................................................................................................2711.001100000
..........................................................................................................AAAGTTTTCAATCTGATTT..............................................................................................................................................................................................................................................1911.001001000
.........................................................................................................TAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................1911.001010000
....................................................................................TACCACAATACGTGATGCATGTAAAGTT...........................................................................................................................................................................................................................................................2811.001010000
...........................................................AATAGGAAAGAGGCCTGGCAGTTGT.......................................................................................................................................................................................................................................................................................2511.001000001
.............................................................................................................GTTTTCAATCTGATTTGGCAAA----------------------..................................................................................................................................................................................................................2230.672200000
droWil2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTTAAGTCACTGTGGGCTGTTTGGTTCTCCATCAACGTTATAAGAAACGCTACGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................ACTGTGGGCTGTTTGGTTCTC...........................2111.00101000
........................................................................................................................................................................................................................................................................................................................GTCACTGTGGGCTGTTTGGTTCTCC..........................2511.00110000
droVir3
------------------------------------------------------------------------------------------------TGATGCACCCAAAGTTTTCAATCTGAATACAAATT----------------------TG--------GCAGA-A----CCCA-------------------------------------------------------------------------------------AGTTTTCGCTGGTTGTTCAAAATCTAAT--CTAA-TT--G-CTTTTACAGTTACCGTGGGCTGCCTCGTGCTGCATCAACGCTACAAGAAGCGCTACGAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................GATGCACCCAAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................27178.00780060500000000000202000020000000000100000000000000000000000000015
.....................................................................................................CACCCAAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................23165.00655344600000000001010010000000000000000000000000000000000000300010
.........................................................................................................CAAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................19111.0011006000000000000010100000000000001000000000000000000000010100000
......................................................................................................ACCCAAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................2218.008006000000000000001000000000000010000000000000000000000000000000
..................................................................................................ATGCACCCAAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................2617.007007000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................1816.006020000000000000010000000000000000000000000000000000000000000003
.................................................................................................GATGCACCCAAAGTTTTCAATCTGAATA..............................................................................................................................................................................................................................................2816.006005000000000000100000000000000000000000000000000000000000000000
.....................................................................................................CACCCAAAGTTTTCAATCTGAATA..............................................................................................................................................................................................................................................2415.005012100000000000010000000000000000000000000000000000000000000000
.......................................................................................................CCCAAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................2115.005002000000000000000000000000000000000000000000000000000000120000
........................................................................................................CCAAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................2014.004002100000000000000000000000000000000000000000000000000000010000
...................................................................................................TGCACCCAAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................2514.004002000000000000000000010000000000000000000000000000000000000001
....................................................................................................GCACCCAAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................2414.004002000000000001000000000000000000000000000000000000000000000001
.........................................................................................................CAAAGTTTTCAATCTGAATA..............................................................................................................................................................................................................................................2012.002001000000000000000000000000000000000000000000100000000000000000
.....................................................................................................CACCCAAAGTTTTCAATCTGAATC..............................................................................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACCCAAAGTTTTCAATCTGAATA..............................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CTGCCTCGTGCTGCATCAACGCT.................2311.001000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................AAAGTTTTCAATCTGAATA..............................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................ATCTGAATACAAATT----------------------TG--------GCAGA-A----CCCA-------------------------------------------------------------------------------------A...................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CAAAGTTTTCAATCTGAATAA.............................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000001000000000000000
.....................................................................................................CACCCAAAGTTTTCAATCTGAATG..............................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................GATGCACCCAAAGTTTTCAATCTG..................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TGCATCAACGCTACAAGAAGCGCTAC...2611.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GTGCTGCATCAACGCTACAAGAAGCGCT.....2811.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................GCACCCAAAGTTTTCAATC....................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................................................................................................GTTACCGTGGGCTGCCTCGTGCTGCA.........................2611.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................TGATGCACCCAAAGTTTTCAATCTGAAT...............................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................GATGCACCCAAAGTTTTCAATCT...................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................ATGCACCCAAAGTTTTCAATCTGAATA..............................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................CAAAGTTTTCAATCTGAATC..............................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................GATGCACCCAAAGTTTTCA.......................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................GATGCACCCAAAGTTTTCAAT.....................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................GTTTTCAATCTGAAT...............................................................................................................................................................................................................................................1520.501000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................GTTTTCAATCTGAATC..............................................................................................................................................................................................................................................16100.202000000000000000000000000000000000000000000000000000000000100001
droMoj3
------------------------------------------------------------------------------------------------TGATGCATTCAAAGTTTTCAATCTGATTCTAAAAC----------------------T----------TAAGATAA--GC------------AACAGAGT-----------------TTTGTT----------------------------------------------------------ATCATAAATCTAAT--TGAATCA--A-ATTTTACAGTTACTGTGGGTTGTCTCGTGCTGCATCAACGTTATAAGAAGCGCTATGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................GATGCATTCAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................271108.0010810800000
.....................................................................................................CATTCAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................23191.00918900020
......................................................................................................ATTCAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................22168.00686800000
....................................................................................................GCATTCAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................24125.00252500000
.......................................................................................................TTCAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................21115.00151200030
.........................................................................................................CAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................19114.00141200020
........................................................................................................TCAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................20113.00131200010
..................................................................................................ATGCATTCAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................26111.00111100000
..........................................................................................................AAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................1818.008800000
.................................................................................................GATGCATTCAAAGTTTTCAATCTGATTC..............................................................................................................................................................................................................................................2814.004400000
...................................................................................................TGCATTCAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2514.004400000
.................................................................................................GATGCATTCAAAGTTTTCAAT.....................................................................................................................................................................................................................................................2112.002200000
...........................................................................................................AAGTTTTCAATCTGATTC..............................................................................................................................................................................................................................................1812.002000020
......................................................................................................ATTCAAAGTTTTCAATCTGATTC..............................................................................................................................................................................................................................................2312.002200000
....................................................................................................GCATTCAAAGTTTTCAATCTG..................................................................................................................................................................................................................................................2112.002200000
..............................................................................................................................................................................................................................................................................................................................GTGGGTTGTCTCGTGCTGCATCA......................2311.001000001
.....................................................................................................CATTCAAAGTTTTCAATCTGAT................................................................................................................................................................................................................................................2211.001100000
.................................................................................................GATGCATTCAAAGTTTTCAATCT...................................................................................................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................................................................................................GGGTTGTCTCGTGCTGCATCAA.....................2211.001100000
.......................................................................................................TTCAAAGTTTTCAATCTGATC...............................................................................................................................................................................................................................................2111.001000010
......................................................................................................ATTCAAAGTTTTCAATCTG..................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................CATTCAAAGTTTTCAATCTGATTA..............................................................................................................................................................................................................................................2411.001100000
.........................................................................................................CAAAGTTTTCAATCTGATTC..............................................................................................................................................................................................................................................2011.001000001
................................................................................................TGATGCATTCAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2811.001100000
..................................................................................................ATGCATTCAAAGTTTTCAATCTGA.................................................................................................................................................................................................................................................2411.001100000
.................................................................................................GATGCATTCAAAGTTTTC........................................................................................................................................................................................................................................................1811.001100000
.................................................................................................GATGCATTCAAAGTTTTCAATC....................................................................................................................................................................................................................................................2211.001100000
.......................................................................................................TTCAAAGTTTTCAATCTGATTC..............................................................................................................................................................................................................................................2211.001000010
......................................................................................................ATTCAAAGTTTTCAATCTGA.................................................................................................................................................................................................................................................2011.001100000
..................................................................................................ATGCATTCAAAGTTTTCAATCTGATTC..............................................................................................................................................................................................................................................2711.001100000
..................................................................................................ATGCATTCAAAGTTTTCAAT.....................................................................................................................................................................................................................................................2011.001100000
droGri2
------------------------------------------------------------------------------------------------TAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCAGTTACTGTGGGCTGCTTGGTGCTGCATCAACGCTACAAGAAGCGCTATGAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
A-----------------------------------------------------------------AAAAGGTCTGTCCGGTTACG-------AAATGATTCACTCAAAGTTTTCAATCTGATAAAGCGCTTCACAAAATGCACATTGTACACCTCTTGCTAT---------GT-ATATATTAAAATATT----------------------------------------------------------------------CCTTG---------T---------------T--TTCATTT--T-ATTTTGTAGTAACCGTGGGCTGCCTGGTGCTACATCAGCGTTACAAAAAACGCTATGAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................GATTCACTCAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................27134.00342920030
.......................................................................................................CTCAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2115.005101003
.........................................................................................................CAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................1914.004000103
.......................................................................GTCTGTCCGGTTACG-------AAAT..........................................................................................................................................................................................................................................................................1913.003100020
.................................................................................................GATTCACTCAAAGTTTTCAATCTGATAA..............................................................................................................................................................................................................................................2813.003210000
..................................................................................................ATTCACTCAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2612.002110000
...................................................................AAAGGTCTGTCCGGTTACG-------AAATGATT......................................................................................................................................................................................................................................................................2712.002000002
......................................................................................................ACTCAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2212.002110000
.....................................................................................................CACTCAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2312.002000002
...............................................................................................ATGATTCACTCAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2912.002200000
........................................................................................................TCAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2011.001000001
......................................................................................................................................................................................................................................................................................................................TAGTAACCGTGGGCTGCCTGGTGC.............................2411.001100000
.......................................................................GTCTGTCCGGTTACG-------AAATGATT......................................................................................................................................................................................................................................................................2311.001000010
...................................................................AAAGGTCTGTCCGGTTACG-------AAAT..........................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................GATTCACTCAAAGTTTTCAATC....................................................................................................................................................................................................................................................2211.001001000
.................................................................................TTACG-------AAATGATTCACTCAAAGT............................................................................................................................................................................................................................................................2311.001010000
....................................................................................................TCACTCAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2411.001000001
......................................................................GGTCTGTCCGGTTACG-------AAAT..........................................................................................................................................................................................................................................................................2011.001010000
...........................................................................GTCCGGTTACG-------AAATGATTCAC...................................................................................................................................................................................................................................................................2211.001001000
....................................................................AAGGTCTGTCCGGTTACG-------AAAT..........................................................................................................................................................................................................................................................................2211.001000010
...................................................................................................TTCACTCAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2511.001010000
.............................................................................................................GTTTTCAATCTGATAAAGC...........................................................................................................................................................................................................................................1911.001000001
droBip1
----------------------------------------------------------------GAAAAAGGTCTGCCAGGTTACA-------AAATGATTCCCTCAAAGTTTTCAATCTGATAAAGCTCCGTAAAGAATTCCCAT-----ACCTTTGTCTAT---------GT-ATATATTAAAATATT----------------------------------------------------------------------CTGTA---------T---------------T--TTAATTT--TATTTTTTTAGTAACCGTGGGCTGCCTGGTGCTACATCAGCGTTACAAGAAACGCTATGAASizeHit CountTotal NormTotal
No Reads
droKik1
------------------------------------------------------------------------------------------------TGATGCTTGTGAAGTTTTCAATCTGATTTTATATG----------------------TA--------TTTAATTAA--TT------------AACTATAT-----------------TTTAACTTAATAATTTCTT-AACTAATCTTAA--------TCA------------------T---------------T--TCCTTTT--T-TAATTCTAGTCACCGTAGGCTGTTTGGTTTTGCATCAACGTTATAAGAAACGCTATGAASizeHit CountTotal NormTotal
No Reads
droFic1
------------------------------------------------------------------------------------------------TGATGCGTATAAAGTTTTCAATCTGAAATAATTAC----------------------TG--------TTAGG-AAT--TGAATGCA---------------------------------------------GGTTTTTAATATAGTTTT----AAACTAATATTCT--------------------------------ACATTTAAT-ACGTTTCAGTCACTGTTGGTTGTTTGGTGCTGCATCAGCGTTATAAGAAACGCTACGAASizeHit CountTotal NormTotal
No Reads
droEle1
------------------------------------------------------------------------------------------------TGATGCGTCAAAAGTTTTCAATCTGATAAAACAAC----------------------TT--------TTATG-AAT--TCTATGAA---------------------------------------------TTTCTTTCCTTAAATTTA----ACACTTATATCTTT-----------A---------------A--ATAATTT--T-ACATTTCAGTCACTGTTGGTTGCTTGGTCCTGCATCAGCGTTATAAGAAACGCTACGAASizeHit CountTotal NormTotal
No Reads
droRho1
------------------------------------------------------------------------------------------------TGATGCGTGAAAAGTTTTCAATCTGATATAATCTT----------------------TG--------ACAAG-GAT--TTTATTAA---------------------------------------------CGTGTTTCATAAAGATTA----AGACTTATATCCTATT---------T---------------T--TTCAATT--T-AATTTTCAGTCACTGTTGGATGCTTAGTCCTGCATCAGCGTTATAAGAAACGCTTCGAASizeHit CountTotal NormTotal
No Reads
droBia1
------------------------------------------------------------------------------------------------TGATGCGTGTAAAGTTTTCAATCTGATGTCATTTC----------------------TA--------CAAAA---G--TTTGTGAA---------------------------------------------AATATTTCATAAAATTGG----TAGCTAATATTCTT-----------T---------------G--TAAAT----T-AATTTTCAGTCACCGTTGGCTGCTTGGTGCTGCATCAGCGTTACAAGAAACGCTACGAASizeHit CountTotal NormTotal
No Reads
droTak1
A-------------------------------------------------------------------AAGATCTGCCAGGTG-TA-------CAATGATGCGTCAAAAGTTTTCAATCTGATAATTGAGA----------------------AG--------TTGAG-AAG--TTCGTGAA---------------------------------------------ACTCTTTTATAACATAAT----TAACAGATATATT--------------------------------TCA-------TTTTTTTAGTTACTGTCGGCTGCTTGGTGCTGCATCAGCGTTATAAGAAACGCTACGAASizeHit CountTotal NormTotal
No Reads
droEug1
------------------------------------------------------------------------------------------------TGATGTGTCAAAAGTTTTCAATCTGATTTAATTTC----------------------TC--------TTAAG-AAC--TTTATGAA---------------------------------------------TTTCT-ACCTCAGTTTTATCACTAACTCGTATT------------------------------AATTACA-------TTTTTTCAGTTACTGTTGGTTGCTTGGTGCTGCATCAGCGTTATAAGAAACGCTACGAASizeHit CountTotal NormTotal
No Reads
dm3
------------------------------------------------------------------------------------------------TGATGTACCAAAAGTTTTCAATCTGATACAATTAA----------------------TGTTTCTTAT---------CT-CTATATAATCATATATAATG------------------TTTAAAC---------------------------------CTATATCCTG-----------C---------------C--TACATTT--A-ATTTTCTAGTAACCGTTGGCTGTTTGGTGCTGCATCAGCGTTATAAGAAACGATACGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................................................................................AAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................19112.00120000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000020000000000000000000000000000000000000000010003100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................GTACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................24110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000100000001000030000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2317.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000030000000000000000000000000000000000000000020001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100010000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ATGTACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................GATGTACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................AAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................AAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCGTTATAAGAAACGATACG..2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TGATGTACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GTTTGGTGCTGCATCAGCGTT.................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
......................................................................................................ACCAAAAGTTTTCAATCTGATAC..............................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................ACCGTTGGCTGTTTGGTGCTG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CAAAAGTTTTCAATCTGA.................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TGTACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ACATTT--A-ATTTTCTAGTAACCGT...........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CCAAAAGTTTTCAATCTGATAC..............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................TCAATCTGATACAATTAA----------------------TGTTTCT...........................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCGTTATAAGAAACGATAC...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TGTACCAAAAGTTTTCAA......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AGTAACCGTTGGCTGTTTGGT...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.................................................................................................................TCAATCTGATACAATTAA----------------------TGTT..............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTGGTGCTGCATCAGCGTTATAAGA...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................TTTGGTGCTGCATCAGCGTTAT...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TAGTAACCGTTGGCTGTTTGG................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TAGTAACCGTTGGCTGTTTGGTGC.............................2411.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CATTT--A-ATTTTCTAGTAACT.............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................TGTACCAAAAGTTTTCAATCTGATAA..............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................ATTT--A-ATTTTCTAGTAACT.............................................1930.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................ATATATAATG------------------TTTAAAG---------------------------------T.............................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
droSim2
------------------------------------------------------------------------------------------------TGATGTACCAAAAGTTTTCAATCTGATACAATCAA----------------------TGTTTCTTAT---------CT-CTATATAATCATATTTAATG------------------TTTAAAC---------------------------------TCATATCCTG-----------C---------------C--TACATTT--A-AATTTCCAGTAACCGTCGGCTGTTTGGTGCTGCATCAGCGTTATAAGAAACGCTACGAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................GTACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................24113.0013010120000000000000
.................................................................................................GATGTACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................27111.0011000110000000000000
.........................................................................................................AAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................1916.00600060000000000000
...................................................................................................TGTACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2515.00510030000000100000
.....................................................................................................TACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2314.00400040000000000000
..................................................................................................ATGTACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2613.00302010000000000000
........................................................................................................CAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2013.00300030000000000000
.............................................................................................................GTTTTCAATCTGATA...............................................................................................................................................................................................................................................1512.00200000011000000000
......................................................................................................ACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2212.00200020000000000000
.......................................................................................................CCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2112.00200010000000100000
................................................................................................TGATGTACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2812.00200020000000000000
..................................................................................................................................................................................................G------------------TTTAAAC---------------------------------TCATATCCTG-----------C---------------C--......................................................................2011.00110000000000000000
...................................................................................................TGTACCAAAAGTTTTCAATCTG..................................................................................................................................................................................................................................................2211.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................TCAGCGTTATAAGAA..........1511.00100000001000000000
.......................................................................................................CCAAAAGTTTTCAATCTG..................................................................................................................................................................................................................................................1811.00101000000000000000
.....................................................................................................TACCAAAAGTTTTCAATCTG..................................................................................................................................................................................................................................................2011.00100010000000000000
....................................................................................................GTACCAAAAGTTTTCAATCTG..................................................................................................................................................................................................................................................2111.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................AACCGTCGGCTGTTTGGT...............................1811.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................TAACCGTCGGCTGTTTGGTGCTGC..........................2411.00100000001000000000
....................................................................................................GTACCAAAAGTTTTCAATCTGATAC..............................................................................................................................................................................................................................................2511.00100010000000000000
..........................................................................................................AAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................1811.00100010000000000000
droSec2
------------------------------------------------------------------------------------------------TGATGTAACAAAAGTTTTCAATCTGATACAATCAA----------------------TGTTTCTTAT---------CT-CTATATTATCATATTTAATG------------------TGTAAAC---------------------------------TTATATCCTG-----------C---------------C--TACATTT--A-ATTTTCCAGTAACCGTCGGCTGTTTGGTGCTGCATCAGCGTTATAAGAAACGCTACGAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................CAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2014.0042020
......................................................................................................AACAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2214.0044000
.......................................................................................................ACAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2113.0031101
....................................................................................................GTAACAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2411.0011000
......................................................................................................AACAAAAGTTTTCAATCTG..................................................................................................................................................................................................................................................1911.0011000
.........................................................................................................AAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................1911.0011000
.......................................................................................................................................................................................................................................................................................................................AGTAACCGTCGGCTGTTTGGTGC.............................2311.0010010
.................................................................................................GATGTAACAAAAGTTTTCAATCTGATT...............................................................................................................................................................................................................................................2711.0010010
......................................................................................................AACAAAAGTTTTCAATCTGA.................................................................................................................................................................................................................................................2011.0011000
..........................................................................................................................................................................................................................................................................................................................AACCGTCGGCTGTTTGGTGCTG...........................2211.0010100
droYak3
----------------------------------------------------------------------GGTCTGACAGGTCCTA-------AAATGATGCACCAAAAGTTTTCAATCTGATATAATCAA----------------------AGTTTGCTAT---------CT-CTATATTATTATAAACAATGT-----------------GTTAAGCTAAT-------------------------------ACATTTAG-----------GCT-------------G--TACATTT--A-ATTTTCCAGTAACCGTTGGCTGTTTGGTGCTGCATCAGCGATATAAGAAACGCTACGAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................CACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................23120.0020117000110000
....................................................................................................GCACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................24114.0014011000030000
......................................................................................................ACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2218.00806110000000
.................................................................................................GATGCACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2715.00505000000000
.........................................................................................................AAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................1912.00202000000000
.............................................................................CAGGTCCTA-------AAATGATGCACC..................................................................................................................................................................................................................................................................2112.00202000000000
....................................................................................TA-------AAATGATGCACCAAAAGTT...........................................................................................................................................................................................................................................................2111.00101000000000
..........................................................................................................................................................................................................................................................................................................TT--A-ATTTTCCAGTAACCGTTGGCT......................................2411.00100001000000
....................................................................................................................................................................................................................................................................................................................................TGTTTGGTGCTGCATCAGC....................1911.00101000000000
...............................................................................................................TTTCAATCTGATATAATCAA----------------------AGTTT.............................................................................................................................................................................................................2511.00101000000000
.............................................................................................AAATGATGCACCAAAAGTTT..........................................................................................................................................................................................................................................................2011.00101000000000
....................................................................................................GCACCAAAAGTTTTCAATCTG..................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................CCTA-------AAATGATGCACCAA................................................................................................................................................................................................................................................................1811.00100010000000
........................................................................................................................................................................................................................................................................................................................GTAACCGTTGGCTGTTTGGC...............................2011.00100100000000
................................................................................GTCCTA-------AAATGATGCACC..................................................................................................................................................................................................................................................................1811.00100100000000
.........................................................................................................................................................................................................................................................................................................................TAACCGTTGGCTGTTTGGT...............................1911.00101000000000
.......................................................................................................CCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2111.00101000000000
...............................................................................GGTCCTA-------AAATGATGCACCAAAA..............................................................................................................................................................................................................................................................2311.00101000000000
...................................................................................................TGCACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2511.00101000000000
..................................................................................CCTA-------AAATGATGCACCAAAAGT............................................................................................................................................................................................................................................................2211.00101000000000
................................................................................GTCCTA-------AAATGATGCACCAA................................................................................................................................................................................................................................................................2011.00101000000000
..............................................................................AGGTCCTA-------AAATGATGCACC..................................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................CAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2011.00101000000000
...............................................................................GGTCCTA-------AAATGATGCACCAAAAGT............................................................................................................................................................................................................................................................2511.00101000000000
...................................................................................CTA-------AAATGATGCACCAAAAGT............................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................ATGCACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2611.00101000000000
droEre2
---------------------------------------------------TCCTGAGCTATCCTATAGGGGCCTGACAGGTCCTA-------AAATGATGCACCAAAAGTTTTCAATCTGATATAATCAA----------------------TGATTATTAC---------CT-GCATATAATCATGTACAATGT-----------------TTTAAAC---------------------------------TAATATACTG-----------C---------------C--TACATTT--T-ATTTTCCAGTAACCGTTGGCTGCTTGGTGCTGCACCAGCGATATAAGAAACGCTACGAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................AAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................1917.0070000070
.....................................................................................................CACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2315.0053001010
........................................................................................................CAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2015.0050000230
..........................................................................................................AAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................1814.0040300010
............................................................ATCCTATAGGGGCCTGACA............................................................................................................................................................................................................................................................................................1914.0041100110
....................................................................................................GCACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2413.0030101010
..................................................................................................ATGCACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2612.0020000020
.................................................................................................GATGCACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2712.0021000100
...........................................................TATCCTATAGGGGCCTGACA............................................................................................................................................................................................................................................................................................2012.0021010000
................................................................................................................................................................................................................................................................................................................................TGGCTGCTTGGTGCTGCACCAGC....................2311.0010100000
.........................................................................................................................................................................................................................................................................................................................................GGTGCTGCACCAGCGATATAA.............2111.0011000000
...........................................................TATCCTATAGGGGCCTGACAG...........................................................................................................................................................................................................................................................................................2111.0010000010
...................................................................................CTA-------AAATGATGCACCAAAAGTTTT.........................................................................................................................................................................................................................................................2411.0010100000
..........................................................................................................................................................................................................................................................................................................................AACCGTTGGCTGCTTGGTGCTGCACCA......................2711.0010100000
..............................................................................................AATGATGCACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................3011.0010000001
........................................................................................................................................................................................................................................................................................................................GTAACCGTTGGCTGCTTGGT...............................2011.0010000010
...................................................................................................TGCACCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2511.0011000000
...............................................................................GGTCCTA-------AAATGATGCACCAAAAGTTTTC........................................................................................................................................................................................................................................................2911.0010100000
...................................................................................CTA-------AAATGATGCACCAAAA..............................................................................................................................................................................................................................................................1911.0010100000
.....................................................................................................CACCAAAAGTTTTCAATCTGATAT..............................................................................................................................................................................................................................................2411.0010001000
.......................................................................................................CCAAAAGTTTTCAATCTGATA...............................................................................................................................................................................................................................................2111.0011000000
........................................................................................................................................................................................................................................................................................................................GTAACCGTTGGCTGCTTGT................................1911.0010000010
..........................................................................................................................................................................................................................................................................................................................AACCGTTGGCTGCTTGGTGCTGCACCAGC....................2911.0010100000
..........................................................CTATCCTATAGGGGCCTGACA............................................................................................................................................................................................................................................................................................2111.0011000000
.............................................................................................................GTTTTCAATCTGATA...............................................................................................................................................................................................................................................1520.5010000001

Generated: 05/18/2015 at 05:58 AM