ID:

dps_2988

 Coordinate:

XR_group6:2023657-2023807 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -8.3

Flybase annnotation

exon [dpse_GLEANR_12643:3]; CDS [Dpse\GA23600-cds]; intron [Dpse\GA23600-in]

Repeatable elements

NameClassFamilyStrand
(CTG)nSimple_repeatSimple_repeat+
mature
  1. XL_group1e:5384838-5384861 -
  2. 3:2660579-2660602 -
  3. 3:7335428-7335451 +
  4. 3:11298579-11298602 +
  5. 3:14987710-14987733 -
  6. 3:17662308-17662331 +
  7. 2:13902402-13902425 +
  8. 2:27573043-27573066 -
  9. XR_group8:1467470-1467493 +
  10. 4_group1:752253-752276 -
  11. dps_2988  XR_group6:2023753-2023776 -
  12. XL_group1a:3750079-3750102 -
  13. XL_group1a:4023222-4023245 -
  14. Unknown_singleton_1849:5381-5404 +
star
  1. Unknown_singleton_957:6895-6918 -
  2. Unknown_singleton_957:6943-6966 -
  3. 3:14604872-14604895 +
  4. 2:30746248-30746271 +
  5. Unknown_singleton_2584:5896-5919 -
  6. Unknown_group_476:604-627 +
  7. Unknown_group_476:652-675 +
  8. Unknown_group_667:14086-14109 +
  9. dps_2988  XR_group6:2023724-2023747 -
  10. Unknown_singleton_1776:1126-1149 -
  11. Unknown_singleton_535:211-234 -
  12. Unknown_singleton_535:1229-1252 -
  13. Unknown_group_549:530-553 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAACGACAACGGCCGCGTCCGCCTGCTTTGCCGGCACCGGTCGTCCCACTGTGCACTCGAGTGCCAGCTCCTTGCACCATCATCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCACCAGCATCAGCAGAACCAAAAGCACCCACAGCAGCCTGCCATGGCTGCCATGGCTGCCACGGCTGGCACGGCGGCCACGAGTAGTTGCACCAGTGCCACCAGTGGCACAGCGACAACTCATTCGATACCC
*********************************************************************************.......((....((.((.((.((....)).)).)).))....))........********************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM444067
head
 GSM343916
embryo
 M059
embryo
 SRR902012
CNS imaginal disc
...................................................TGCACTGGAGTGGCTGCTCCTTG................................................................................................................................................................................. 23 3 3 0.33 1 1 0 0 0 0
...................................................TGCACTGGAGTGGCTGCTCCTT.................................................................................................................................................................................. 22 3 4 0.25 1 1 0 0 0 0
................................................................................................................................................................................................................CACCAGGGCCACCAGTAGC........................ 19 2 9 0.11 1 0 1 0 0 0
.............................................................................................................................................................................................................................AATGGCACAGGAACAACTCA.......... 20 3 12 0.08 1 0 1 0 0 0
.................................................................................ATCAGCAGCAACAGCAGCAGCAGC.................................................................................................................................................. 24 0 14 0.07 1 0 0 1 0 0
..............................................................................................................CAGCAGCAGCACCAGCATCAGCAG..................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0
................................................................................................................GCAGCAGCACCAGCATCAGCAG..................................................................................................................... 22 0 14 0.07 1 1 0 0 0 0
.................................................................................ATCAGCAGCACCAGCAGCAGCAGCAACA.............................................................................................................................................. 28 1 16 0.06 1 1 0 0 0 0
.............................................................................................................GCAGCAGCAGCACCAGCATCAGCA...................................................................................................................... 24 0 17 0.06 1 1 0 0 0 0
...........................................................................................................CAGCAGCAGCAGCACCAGCATCAGC....................................................................................................................... 25 0 17 0.06 1 0 0 0 1 0
.............................GCCGGCACTGGTGGTCGCAC.......................................................................................................................................................................................................... 20 3 17 0.06 1 1 0 0 0 0
..........................................................................................................ACAGCAGGAGCAGCACCATAAT........................................................................................................................... 22 3 20 0.05 1 1 0 0 0 0
.....................................................................................................CAGCAACAGCAGCAGCAGCAC................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
....................................................................................................GCAGCAACAGCAGCAGCAGCAC................................................................................................................................. 22 0 20 0.05 1 0 0 1 0 0
......................................................................................................................................................................TTCCATGCCCGCCACGGCT.................................................................. 19 3 20 0.05 1 1 0 0 0 0
................................................................................CATCAGCAGCAACAGCAGC........................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0
.................................................................................................................CAGCAGCACCAGCATCAGCAGT.................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0
.......................................................................................AGCAACCGCAGCAGCAGCAACCGCAGC......................................................................................................................................... 27 2 20 0.05 1 1 0 0 0 0
.....................................................................................GCAGCAACAGCAGCAGCAGCAACAGCA........................................................................................................................................... 27 0 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

ATTGCTGTTGCCGGCGCAGGCGGACGAAACGGCCGTGGCCAGCAGGGTGACACGTGAGCTCACGGTCGAGGAACGTGGTAGTAGTCGTCGTTGTCGTCGTCGTCGTTGTCGTCGTCGTCGTGGTCGTAGTCGTCTTGGTTTTCGTGGGTGTCGTCGGACGGTACCGACGGTACCGACGGTGCCGACCGTGCCGCCGGTGCTCATCAACGTGGTCACGGTGGTCACCGTGTCGCTGTTGAGTAAGCTATGGG
*********************************************************************************************************************.......((....((.((.((.((....)).)).)).))....))........********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 GSM444067
head
 SRR902010
ovaries
.....................................................................................................................................................GTTGTGGGACGGTACCGTCGGT................................................................................ 22 3 2 0.50 1 0 0 1 0
.................................................................TCGCGGAAGGTGGTGGTAGTCG.................................................................................................................................................................... 22 3 2 0.50 1 0 1 0 0
.............GCGCAGGCGTACGGAACG............................................................................................................................................................................................................................ 18 2 3 0.33 1 1 0 0 0
.............................................................................................................CGTCGTCGTCGTGGTCGTAGT......................................................................................................................... 21 0 20 0.20 4 4 0 0 0
..............................................................................................................GTCGTCGTCGTGGTCGTAGT......................................................................................................................... 20 0 20 0.20 4 4 0 0 0
..................................................................................................................TCGTCGTGGTCGTAGTCGT...................................................................................................................... 19 0 20 0.20 4 4 0 0 0
.......................................................GAGCGCACGGTGGAGGAAC................................................................................................................................................................................. 19 2 5 0.20 1 1 0 0 0
...........................................................................................................GTCGTCGTCGTCGTGGTCGTAGT......................................................................................................................... 23 0 20 0.15 3 3 0 0 0
.............................................................................................................CGTCGTCGTCGTGGTCGTAGTC........................................................................................................................ 22 0 17 0.12 2 2 0 0 0
.............................................................................................................................................................................CGAGGGTGGCGACCGTGC............................................................ 18 2 9 0.11 1 1 0 0 0
.................................................................................................................GTCGTCGTGGTCGTAGTC........................................................................................................................ 18 0 20 0.10 2 2 0 0 0
...............................................................................................................TCGTCGTCGTGGTCGTAGTC........................................................................................................................ 20 0 20 0.10 2 2 0 0 0
..............................................................................................................GTCGTCGTCGTGGTCGT............................................................................................................................ 17 0 20 0.10 2 0 0 0 2
..........CCGGCCCCGGCGGACGAA............................................................................................................................................................................................................................... 18 2 14 0.07 1 1 0 0 0
..................................................................................................................TCGTCGTGGTCGTAGTCGTC..................................................................................................................... 20 0 14 0.07 1 1 0 0 0
...........................................................................................................GTCGTCGTCGTCGTGGTCGTAGTC........................................................................................................................ 24 0 17 0.06 1 1 0 0 0
.............................................................................................................CGTCGTCGTCGTGGTCGTAGTCGT...................................................................................................................... 24 0 17 0.06 1 1 0 0 0
............................................................................................................TCGTCGTCGTCGTGGTCGTAGTC........................................................................................................................ 23 0 17 0.06 1 1 0 0 0
................................................................................................................CGTCGTCGTGGTCGTAGTCGT...................................................................................................................... 21 0 18 0.06 1 1 0 0 0
.........................................................................................................................................GTTTTCGTGGGGGTCGAC................................................................................................ 18 2 18 0.06 1 0 1 0 0
...............................................................................................................TCGTCGTCGTGGTCGTAGTCGT...................................................................................................................... 22 0 18 0.06 1 1 0 0 0
..............................................................................................................GTCGTCGTCGTGGTCGTAGTCGT...................................................................................................................... 23 0 18 0.06 1 1 0 0 0
................................................................................................................CGTCGTCGTGGTCGTAGTCG....................................................................................................................... 20 0 19 0.05 1 1 0 0 0
..............................................................................................................GTCGTCGTCGTGGTCGTAGTCG....................................................................................................................... 22 0 19 0.05 1 1 0 0 0
...........................................................................................TGTCGTCGTCGTGGTTGTCGTCGTCGTC.................................................................................................................................... 28 1 20 0.05 1 1 0 0 0
...................................................................................................................CGTCGTGGTCGTAGTCGT...................................................................................................................... 18 0 20 0.05 1 1 0 0 0
..............................................................................................CGTCGTCGTCGTTGTCGTCGT........................................................................................................................................ 21 0 20 0.05 1 1 0 0 0
..............................................................................................................GTCGTCGTCGTGGTCGTAGTC........................................................................................................................ 21 0 20 0.05 1 1 0 0 0
.............................................................................GTAATAGTCGTCGTTGTC............................................................................................................................................................ 18 1 20 0.05 1 0 1 0 0
......................................................................................................................................TTGTCTTACGTGGGTGTCGT................................................................................................. 20 3 20 0.05 1 0 0 0 1
.................................................................................................................GTCGTCGTGGTCGTAGTCG....................................................................................................................... 19 0 20 0.05 1 1 0 0 0
................................................................................................................CGTCGTCGTGGTCGTAGTC........................................................................................................................ 19 0 20 0.05 1 1 0 0 0
................................................................................................................CGTCGTCGTGGTCGTAGT......................................................................................................................... 18 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:2023607-2023857 - dps_2988 TAA-C--GAC-AACGG---CC---G---CGTCC----G------CC-TGCTT----TGC-------------------------CGGCACCG----GTCGTCCCAC----TGTGCACTCGA-------------------------------------------------------------------GTGCCA---------------------------GCTCCTTGCACCATCATCAG----CAGC---------AACAGCAG------CAGC---A------------GC------------AACAGCAGCAGCAG---------------CACCAGCATCAGCAGAACC---------------AAAA---------------------------------------------------------------GCACCCACAGCAGC---------------------------------------------------------------------------------------------------CTGCCAT------------------------------------------------GGCTGCCATGGCTGCC--------------------------------------------------ACGGC---TG------GCACG-GCGGCCACGAGTAG------------------------------------------------------------------------------------------------------TTGCACCAGTGCCACCAGTG--------G------------CACAGC-----GA----CAACTCAT---------------------------------------------------------------TCGA---TAC--CC
droPer2 scaffold_9:316775-316992 - TAA-C--GAC-AACGG---CC---G---CGTCC----G------CC-TGCTT----TGC-------------------------CGGCACCG----GTCGTCCCAC----TGTGCACTCGA-------------------------------------------------------------------GTGCCA---------------------------GCTCCTTGCACCATCATCAG----C---------------AG---------CAGC---A------------GC------------------------------------------ACCAGCATCAGCAGAACC---------------AAAA---------------------------------------------------------------GCACCCACAGCAGC---------------------------------------------------------------------------------------------------CTGCCAT------------------------------------------------GGCTGCCATGGCTGCC--------------------------------------------------AC---G----------------GCGGCCACGAGTAG------------------------------------------------------------------------------------------------------TTGCACCAGTGCCACCAGTG--------G------------CACAGC-----GA----CAACTCAT---------------------------------------------------------------TCGA---TAC--CC
droWil2 scf2_1100000004515:4215982-4216247 + A--ATAC--CA-ACGG---CT---A---CC---------------C-TG--T----TGC----------------------AGGCAACAGCG----GCAAG----TCAAGTGCAAACTCAA---GTAGCTG------CTG---CT--------CAACTG----------------------------------------------------------------------CAACAAGTCCAGCAAA----CGCA------ACAGC---------AGCAGCA------------ACAA------CAAC------AACAGCAA------------------------CAGCAGC------ACCA------------------------------------------------------------------------------TCATCATCA---------------------------------------TGTACAAAACACTCAAATTCAACACATTCAAGTGCAATCGGCACC-------------------G------------------------------------------------------CC------ACAACCACAACAACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACCGCCCCAACAACA--------GCAG-----------CAGC-----AA----CAACAAAC---------------------------------------------------------------ACAA---AA---CC
droVir3 scaffold_12875:17516207-17516469 - GCA-C--TGC-AAAAG---CC---G---CAGGC----T------TT-TG-------TGCCGCCGCCGCTGCCGTCAAAT-----CAGC-----------------G-TATG--G-CATCGCA--------GGTGCAGCTGCCGCCC---TTTGGACCGCCA----ACAACCATGGAGCAGCAG----------------------------------------------CAGAAGCAACA----------------------------------GC---A------------GC------------AACAGCAGCCGCAGCAGCAAC------------AGCAGCCGCAGCAGC---------------AACA---------------------------------------------------------------GCAGCCACAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGCCACAGC-----------------TA-C------------------------AGCAGCAA------------------------------------------CTGCAGCA--G-----------------------AATCCACAGCAG------CAACATCCTCCA-------------------------------CAGC-----AG----CAACATCT---------------------------------------------------------------GCAA---CAG--CA
droMoj3 scaffold_6540:20841189-20841415 - TGA-C--AGC-A---GCTACA---G---CAGCC----GCCCCTGCAC-----CACCCGC-----------------------------------------TGCCAG----TGCGGTGAGCA-----------------------------------------------------------GTGTCA--GCGTCA---------------------------TCCCTG-------CCATCGT----CAGC---------TCGAGCAG------CAGC---A------------GC------------AACAGCAGCAGCACCACC---------------AGCAGCAGTAGCAGCGTAACCG------------------------------CCCC----------------------------------------------AGCTACA------GCTG---------------------------------------------------------------------------------------------GCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGC----------------AGTCTGCTCCAGCGCCTCCT--C-----------------------CACCACCAGCAG------CAACAGCAGC----------------------------------AGC-----AG----CAGTGGCA---------------------------------------------------------------GCGG---CAG---C
droGri2 scaffold_14853:4548713-4548960 - CAG-C--GAC-A---G---CGCCAG------CA----T------CAG-----CGC-CAG-------------------------CTCCAGCTCCACACACGGCTAC----A---GTCTCAA-----------------------------T--CTGCAG-------------------------CTGCATGCCGCCGCCTACAACGACAATT---------------------------TG---A----TGCA------ACAGC---------AGCAGCAACAGCAGCAGCAGCAGCAGCAACAGC------AGCAGCAA---------------C------AGGCGCAAC---------------------------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------GC--AACAA----------------------------------------------------------------------CAGCTGCTGCAGC---------------------------------------------------------------GCTGGCTGGA-TCAGGAGGC---G-------------------------CTGG--CACGTCTAACC-T-------------------CAGCTG------CTGCTGCT-----------------------G-----------CTGC-----AG----CGGGCACA---------------------------------------------------------------ACGG---CAA----
droAna3 scaffold_13082:976675-976912 - GAA-A-A--C----GG---GC---C---CGGGA----G------CGCTGCCA----GGC-------------------------CAGCTCCG----ACGTCGGCCA-----------CGGCG--------------GGCCCGGAAC---CCTGCACCGCCT-------------------------------------------------------------------GAAGGAACAGCAG---C----AGGA------CAAGCAG------AAGC---A------------GG------------ACCAGCAGCAGCAG---------------GACCAGCAGCAGCTGAACC---------------AGCA---------------------------------------------------------------GCAGCAGAACCAGCAGCAGCAG---------------------------------------------------------------------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------ACCA------------------------GCAGTA---G--------------CTGAACCAGCCGCATCT--A-----------------------AACCAGCAGCAG------CTGAACCAGC----------------------------------AGC-----AG----CTGAACCA---------------------------------------------------------------GCAG---CAG--CT
droBip1 scf7180000396418:209212-209450 - CGA-C--GGC-G---GCCACT---A---CGGCC----G------CT-GCC-------------------------------------------------GG----CCTGTTGCCGAGTAGT---TTAGCCGCTGCCGCCTCC--------GTGCTGCAG----------------------------------------------------------------------CAG-------------------CA------CCAGC---------AGCAGCA---------GCAGCAA------CAGC------ATCAACAG---------------C------AGATGCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC--AGCAG-------------------------------------------------------------------------------CAG------------------------------------------------------------------CAACATCAG----------------------------------------------------------------------------------------CACCACCACCACCAGCAGC-----------TA-----------CACT-----CA----CA-----CACACCACAGTCGGCCACCCACCATACACCCCACTCCCATGCCACCCACAACCACTTGCTCAGCTCGT---TGC--GC
droKik1 scf7180000302441:795145-795389 + A--GCAA--CA-GCAG---CA---GCAGCAGCA-ACAG------CC-AGCGGCCGC----------------------------------------------------------------------------------CA------------------------------------------------------------CCAACGGCAACTCAACCAGTAGCTCCA-ACAACAATCCCAG----CAA------------------------CAAC---A---GCAGCAGCAACAA------CAGC------AACGACAG------------------------CAGCAGC---------------------------------------------------------------------------------------------AA---------------------------TCCT----------------------------------------------------ACGGTTCCAGCCCCCTTGGGCAGCAGC--AGCAAT----------------------------------------GGCA------GCAATA------------------------------------ATAAC-----------------CA-TGCTAGCGTT-GCCG------------------------------------------------------------------------------------------------------CCAGCAATCCTGG--------CCAGCAGCA--------GCAGCAGCAGCGGCACACC-----GA----T------G---------------------------------------------------------------CCAA---TGCCCTT
droFic1 scf7180000453912:1960844-1961086 + A--ACAG--CA-ACAG---CA---G---CCAG------------CAA-----CTGCCGC-------------------------CGGCAGCG----ACGT----------------------------------------------------------------------------------------------------TCAACGA----------------------CGTGAGCAACAG----------CAGCACCAACAGC---------AAC---A---------GCTGCGG------CACGGCCAGCAGCAACCA---------------GACGAACAACAGCACCACC---------------AACA---------------------------------------------------------------GCAGCCACAGCAGC---------------------------------------------AGTGCGATCAG----------------------CAGC---------------------CAATCCACAAT----------------------------------------GACG------GCAGCC------------------------------------ACATC-----------------CG-CATCGG---------------------------------------------------------------------CGCCAG--CGGGAGCAACAT--------------------------------CCGCAGCAGTAGCA-----------------G-----------CAGC-----AG----CAGCAGCA---------------------------------------------------------------TCGA---TGG--CC
droEle1 scf7180000491006:1620259-1620505 + A--ACGA--CC-ACGT---TG---CCGGCCACC-----------AC-CGCTT----TGC-------------------------CAGCGGCA----GCTGCCACAT----TGGCCACC-------------------------------------ACCG---------------------------------CA---------------------------GCG--ATCCAC------CAA----------------------CAGAGGCAGCAGC---A------------GCAA------CAGC------AGCAGCAG---------------------CAGCAGCACC---------------------------------------------------------------------------------------------ACCACC---------------------------------------------------------------------------------------------------------------AC-CACCCGATCCATCAGATTCACCCAGGCGGTGCCGGAGCCA---------------------------------------------------------TTGGTTGCCACCAA---AT------CAATC-GC-GCCACG-GCAC------------------------------------------------------------------------------------------------------CGGCACCACTGCAACTC----------------------GGCG--GTCCGGTGAATCCCAGCTTCG---------------------------------------------------------------TGGA---TG---CC
droRho1 scf7180000771932:17030-17279 - CGG-C--CGC-G---CTGAGC---G---CCTTCGCCGG------TC-CGCTGCCGC----------------------------------------------------------------------------------TG-------------C------CCCAGAGTCCCACGG----------------------------------AGT------------TCGGGCACCACCACCAG----CAGC---------ACCACCAG------CAGC---A------------CC------------AGCAGCACCAGCAG---------------------------CACCAGC------------------------------------------------------------------------------------------ACCACC---------------------------------------------------------------------------------------------------------------TG-CACCGCAGCAACCAG-TTCTTCAACGCGATG-----GCCA---------------------------------------------------------TGGCCTACCACCTG--------CCGC-------CGC---------CGCCGCCACCGCCG-----------------------------CCG----CCCGAG--TCGCGGTCACCG--------------------------------CCGCCGCCGGGCGT-----G-----------------------GCCC-----AG----TACCCGCA---------------------------------------------------------------CCCC---CAC--CC
droBia1 scf7180000302428:8338666-8338902 + TGG-C--AGC-A---GTGAAT---G---CGGCC----G------CC-GCCAA----TGC-------------------------TG-----------------------------GAGTGG-----------------------------------------------------------GCGCGG--GAGTGG---------------------------CCTCCGTGGTCACTCAACAA----CAGC---------AACAGC---------AGC---A------------------------------------GCAACAACAACAGCAGGTTCAGGCCCAGAATCCAACCC---------------AGCA---------------------------------------------------------------GCAACAACAACAGG---------------------------------------------------------------------------------------------------CGGCGGT------------------------------------------------GGCTGCGGCAGCGGCG--------------------------------------------------GC---GGCGGCTGCCAGCGCT-GCAG------------------------------------------------------------------------------------------------------CCAATAATATAAGCGCTGATGTCAGCACAA--------G------------CACCAC-----TG----G-----GA---------------------------------------------------------------CCAA---TAC--GA
droTak1 scf7180000415809:695810-696059 - CAA-T--ATC-AACAG---CC---C---CAGCA----G------TC-GGCTGCGCCCAC-------------------------AT------------------AC----CATATAATCGG-------------------------------------------------------------------AGGCGA-------------CGATC------------TCGCCCAGCAGCAGCAG----------CAACACCAACAGC---------AGC---A---------GCAACAA------CAGC------AGCAGCAG---------------C------AACAAC------------------------------------AAGTTGTAATGCATCA------------------------------------CCAGCAGCATCA---------------------------------------AGTGCAGCAGGTTCATTAT----------------------CAGC---------------------------------------------------------------------------A------GCAGCC------------------------------------GGATC-----------------CC-CAGCAG----C--------------AGCAGCAACAGCAA----------------------------------------------------------------------------------------TTGCACCTGGAGCAACAGC-----------AA-----------CAGC-----AA----CAATATGT---------------------------------------------------------------GCAA---CAC---C
droEug1 scf7180000409759:863893-864094 - CAG-C--TAT-G---ACGATG---G------CC----G------CC-TGTTA----TGCCAACTACG---------------------ACAT----GT--CGTCCC-TGTC--G-CACGGCATGTC------------GG---CCC---------------------------------------------------------------------------------TGTCCGCCCTACAG----CAGC---------AGCAGCAG------CAGC---A------------AC------------AACAGCAGCAGCAGCAAC---------------AGCAGCAGCAGCAGC---ACAG---------------------------------------------------------------------------TCAGACGCAGCA----------------------------------------------------------------------------------------------------------GC--AGC-----------------------------------------------------------------------------------------------------------------------------------ACAGCCAAACGC---------------------------------------------------------------------------------------------AG---------CAGCAGCATCACCACCAG----------------------------C-----AG----C------A---------------------------------------------------------------ACAG---CAA--CA
dm3 chr2L:13272561-13272803 + A--ACAG--CA-ACAG---TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------CAACAGCG----ATATCGCCGC----T---GGCTCAG-----------------------------GTGCAGCAGCA-------------------------------------------------------------------GCAGCAACAGCAG---T----TGCA------ACAGCAG------CAGC---A------------AC------------AGCAGTTGCAACAG---------------CAGCAGCAACAGCAGTTGC---------------AACA---------------------------------------------------------------GCAGCAGCAACAGCTCCAGCAGCTGCAGCAACAGCAGTTCCAGCAGCAACAATTGCAGCAACAACAGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAA------CAACAGT-----------------------TG-----------CAGC-----AG----CAGCAACA---------------------------------------------------------------GCAG---CAA---C
droSim2 2l:12890557-12890793 + A--GCAG--CA-ACAG---TC---A---CCGCA----G------CAA-----CGTCCAC-------------------------CAACAGCG----ATATCGCCGC----T---GGCTCAG-----------------------------GTGCAGCAG----------------------------------------------------------------------CAGCAGCAACAGCAGT----TGCA------ACAGC---------AGCAGCA------------ACAG------CTCC------A---GCAG---------------------------CTGCAGC------------------------------------------------------------------------------------------AACA---------------------GCAGTTCCAGCAGCAACAACTGCAACAACAGCAGTTC----------------------CAGC---------------------------------------------------------------------------A---------ACA-----------------------------------------ACAGT----------------------------------------TGCAGCAA------------------------------------------CAGCAACT--G-----------------------CAGCAACAGCAG------CAGCAACAGCAACAGC----------------------------TGC-----AG----CAACAGCA---------------------------------------------------------------GCAG---CAA---C
droSec2 scaffold_4:1623463-1623735 - G--CCGC--CA-GT-----------------GC----G------CG-TCCTT----TGT--------------------TCCCC------CA----ATGGTCGCATCATGT-------------TTACCCGCAATTCCTG---CCCGAA-TCGC------ACCAGAATCAC-----------------------------------------------------------AACAGCAACA---------TGCAACACCAGCAGCAG------CAGC---A------------GC------------------------AA------------------------------C------ACTACTACCAGCAACAGCAGCAACAGCAGGTTGCCCACAATCATAGCCATCATCACATGACTGCCGCTTACTACCAACAGCAGCAACAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------CAACAGCAG----------------------------------------------------------------------------------------CAGCAGCAACACCAGCAAGTTTGCTGCAG------------GACAGC-----AG----CAGCAGCA---------------------------------------------------------------GCAT---TCG--CC
droYak3 X:3332073-3332341 - G--CCGC--CA-GT-----------------GC----G------CG-TCCTT----TGT--------------------TCCCC------CA----ATGGTCGCATCATGT-------------TTACCCGCAATTCCTG---CCCGAA-TCGC------ACCAGAATCAC-----------------------------------------------------------AACAGCAACA---------TGCA------ACACC---------AGCAGCA------------GCAG------CA------------GCAA------------------CAGCAACAGCAAC------ACTACTACCAGCAACAGCAGCAACAGCAGGTTGCCCACAATCATAGCCATCATCACATGACTACCGCTTACTACCAAC----------------------------------------------------------------------------------------------------------------------AGC------------------------------------------------------------------------------------------------------------------------------------------AGC---------AACAGCAACAGCAG----------------------------------------------------------------------------------------CAGCACCAGCA--AGT--------------TG------TAGCA--G------GC----CAGCAGCA---------------------------------------------------------------ACAT---TCG--CC
droEre2 scaffold_4784:3526944-3527180 + TCAGC--AGC-AACAT----C---A---CGGCC----A------TC-CGTTGCATC----------------------------------------------------------------------------------CG---CATCAT-ACAC----------------------------------------------------------------------------ACCAGCAACA----------------------------------GC---A------------AC------------AACAGCAGCAGCAGCAGCAGC------------AGCCGCCGCAAC------ACCACCAGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGC---ACG-----------------CA-CAGCAG----C--------------AGCAGCAGCAGCA-TCATGCCGCCCAGCTGGCCCACACACTCTCC-------------------------TCGGCCGCCGCTGCCGCTGCAGCCGGAAACAGC-------------------------------------------GGT-----GG----CAACACCA---------------------------------------------------------------ACACCCACTCC-AT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TAA-C--GAC-AACGG---CC---G---CGTCC----G------CC-TGCTT----TGC-------------------------CGGCACCG----GTCGTCCCAC----TGTGCACTCGA-------------------------------------------------------------------GTGCCA---------------------------GCTCCTTGCACCATCATCAG----CAGC---------AACAGCAG------CAGC---A------------GC------------AACAGCAGCAGCAG---------------CACCAGCATCAGCAGAACC---------------AAAA---------------------------------------------------------------GCACCCACAGCAGC---------------------------------------------------------------------------------------------------CTGCCAT------------------------------------------------GGCTGCCATGGCTGCC--------------------------------------------------ACGGC---TG------GCACG-GCGGCCACGAGTAG------------------------------------------------------------------------------------------------------TTGCACCAGTGCCACCAGTG--------G------------CACAGC-----GA----CAACTCAT---------------------------------------------------------------TCGA---TAC--CCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................ATCAG----CAGC---------AACAGCAG------CAGC---A------------GC------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.0710000100000
.......................................................................................................................................................................................................................................................................................................................CAGCAGCAG---------------CACCAGCATCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.0710100000000
.........................................................................................................................................................................................................................................................................................................................GCAGCAG---------------CACCAGCATCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.0710100000000
......................................................................................................................................................................................................................................................................................................................GCAGCAGCAG---------------CACCAGCATCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24170.0610100000000
....................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAG---------------CACCAGCATCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25170.0610010000000
...................................................................................................................................................................................................................................................................................C---A------------GC------------AACAGCAGCAGCAG---------------CAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
..................................................................................................................................................................................................................................................................................GC---A------------GC------------AACAGCAGCAGCAG---------------CAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000100000
...........................................................................................................................................................................................................................................CATCAG----CAGC---------AACAGCAG------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................................................................................................................................................................................................................CAGCAG---------------CACCAGCATCAGCAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
................................................................................................................................................................................................................................................G----CAGC---------AACAGCAG------CAGC---A------------GC------------AACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
droPer2
TAA-C--GAC-AACGG---CC---G---CGTCC----G------CC-TGCTT----TGC-------------------------CGGCACCG----GTCGTCCCAC----TGTGCACTCGA-------------------------------------------------------------------GTGCCA---------------------------GCTCCTTGCACCATCATCAG----C---------------AG---------CAGC---A------------GC------------------------------------------ACCAGCATCAGCAGAACC---------------AAAA---------------------------------------------------------------GCACCCACAGCAGC---------------------------------------------------------------------------------------------------CTGCCAT------------------------------------------------GGCTGCCATGGCTGCC--------------------------------------------------AC---G----------------GCGGCCACGAGTAG------------------------------------------------------------------------------------------------------TTGCACCAGTGCCACCAGTG--------G------------CACAGC-----GA----CAACTCAT---------------------------------------------------------------TCGA---TAC--CCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................GTCCCAC----TGTGCACTCGA-------------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.............................................................................................................................................................................................................................................TCAG----C---------------AG---------CAGC---A------------GC------------------------------------------ACCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331010000
.....................................................................................................................................................................................................................................CACCATCATCAG----C---------------AG---------CAGC---A------------GC------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.201001000
...............................................................................................................................................................................................................................................AG----C---------------AG---------CAGC---A------------GC------------------------------------------ACCAGCATCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.201010000
droWil2
A--ATAC--CA-ACGG---CT---A---CC---------------C-TG--T----TGC----------------------AGGCAACAGCG----GCAAG----TCAAGTGCAAACTCAA---GTAGCTG------CTG---CT--------CAACTG----------------------------------------------------------------------CAACAAGTCCAGCAAA----CGCA------ACAGC---------AGCAGCA------------ACAA------CAAC------AACAGCAA------------------------CAGCAGC------ACCA------------------------------------------------------------------------------TCATCATCA---------------------------------------TGTACAAAACACTCAAATTCAACACATTCAAGTGCAATCGGCACC-------------------G------------------------------------------------------CC------ACAACCACAACAACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACCGCCCCAACAACA--------GCAG-----------CAGC-----AA----CAACAAAC---------------------------------------------------------------ACAA---AA---CCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
A--ATAC--CA-ACGG---CT---A---CC---------------C-TG--T----...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAAGTGCAATCGGCACC-------------------G------------------------------------------------------CC------A................................................................................................................................................................................................................................................................................................................................................2411.00101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACA..........................................................................................................................................22200.30605010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAC...........................................................................................................................................24200.15300030
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAACAACA--------GCAG-----------CAGC-----AA----.....................................................................................2080.13100010
..................................................................................................................................................................................................................................................................................GCAGCA------------ACAA------CAAC------AACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
...........................................................................................................................................................................................................................................................CA------ACAGC---------AGCAGCA------------ACAA------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200020
......................................................................................................................................................................................................................................................................................................AA------CAAC------AACAGCAA------------------------CAGCAGC------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200110
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CA.............................................................................................................................................22200.10200110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAC...........................................................................................................................................21200.10200020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAC...........................................................................................................................................27130.08100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAA............................................................................................................................................27160.06100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAA.........................................................................................................................................26190.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------C..............................................................................................................................................22200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------GCAG-----------CAGC-----AA----CAACAAA..............................................................................18200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAGC....................................................................................................................................................................................................................................................................................................................18200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAA.........................................................................................................................................25200.05100010
......................................................................................................................................................................................................................................................................GC---------AGCAGCA------------ACAA------CAAC------AACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------...............................................................................................................................................21200.05100001
..............................................................................................................................................................................................................................................................................................................CAAC------AACAGCAA------------------------CAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
......................................................................................................................................................................................................................................................................................CA------------ACAA------CAAC------AACAGCAA------------------------CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAC...........................................................................................................................................25200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACAACAACAACAACA............................................................................................................................................................................................................................................................................................................................19200.05101000
......................................................................................................................................................................................................................................................................................CA------------ACAA------CAAC------AACAGCAA------------------------CAGCAGC------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACA..........................................................................................................................................21200.05100001
.....................................................................................................................................................................................................................................................................................................CAA------CAAC------AACAGCAA------------------------CAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAC...........................................................................................................................................22200.05100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CA.............................................................................................................................................26200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA--------GCAG-----------CAGC-----AA----CAAC.................................................................................18200.05101000
....................................................................................................................................................................................................................................................................................................ACAA------CAAC------AACAGCAA------------------------CAGCAGC------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
.....................................................................................................................................................................................................................................................................................................CAA------CAAC------AACAGCAA------------------------CAGCAGC------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACA..........................................................................................................................................25200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAGCAACAGCAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------C..............................................................................................................................................23200.05100010
droVir3
GCA-C--TGC-AAAAG---CC---G---CAGGC----T------TT-TG-------TGCCGCCGCCGCTGCCGTCAAAT-----CAGC-----------------G-TATG--G-CATCGCA--------GGTGCAGCTGCCGCCC---TTTGGACCGCCA----ACAACCATGGAGCAGCAG----------------------------------------------CAGAAGCAACA----------------------------------GC---A------------GC------------AACAGCAGCCGCAGCAGCAAC------------AGCAGCCGCAGCAGC---------------AACA---------------------------------------------------------------GCAGCCACAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGCCACAGC-----------------TA-C------------------------AGCAGCAA------------------------------------------CTGCAGCA--G-----------------------AATCCACAGCAG------CAACATCCTCCA-------------------------------CAGC-----AG----CAACATCT---------------------------------------------------------------GCAA---CAG--CASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................CAACCATGGAGCAGCAG----------------------------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000000010000000000000000000000010
........................................................................GTCAAAT-----CAGC-----------------G-TATG--G-CAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................TGCCGCCC---TTTGGACCGCCA----ACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------------------------------------------CTGCAGCA--G-----------------------AATCCACAGCA......................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
........................................................................GTCAAAT-----CAGC-----------------G-TATG--G-CATCGCA--------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000010000000000000000000000000000
........................................................................GTCAAAT-----CAGC-----------------G-TATG--G-CATCGCA--------G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................ACCATGGAGCAGCAG----------------------------------------------CAGAAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCA-------------------------------CAGC-----AG----CAACATCT---------------------------------------------------------------G.............2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................GCCGTCAAAT-----CAGC-----------------G-TATG--G-CATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................CAAAT-----CAGC-----------------G-TATG--G-CATC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
............................................................................................................ATG--G-CATCGCA--------GGTGCAGCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................GCCA----ACAACCATGGAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTCCA-------------------------------CAGC-----AG----CAACATCT---------------------------------------------------------------GCAA---C......2611.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACAGCAG------CAACATCCTCCA-------------------------------CAGC-----AG----C....................................................................................2811.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAG------CAACATCCTCCA-------------------------------....................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GGACCGCCA----ACAACCATGGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCACAGCAG------CAACATCCT......................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCACAGC-----------------TA-C------------------------AGCAGCAA------------------------------------------C..................................................................................................................................................................................................2321.002001100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GGACCGCCA----ACAACCATGGAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------CAACATCCTCCA-------------------------------CAGC-----A..........................................................................................2211.001000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CAACATCCTCCA-------------------------------CAGC-----AG----CAACATCT---------------------------------------------------------------..............2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................GGACCGCCA----ACAACCATGGAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCA--G-----------------------AATCCACAGCAG------C..............................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
....................C---G---CAGGC----T------TT-TG-------TGCCGCCGCCGCTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA--G-----------------------AATCCACAGCAG------C..............................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------CAACATCCTCCA-------------------------------CA..................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--G-----------------------AATCCACAGCAG------CAACAT.........................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
...................................................................CTGCCGTCAAAT-----CAGC-----------------G-TATG--G-CATCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA-C------------------------AGCAGCAA------------------------------------------CTGCAGCA--G-----------------------AATCCAC..........................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................GCAGCAGC---------------AACA---------------------------------------------------------------GCAGCCACAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA................................................................................................................................................................................................................................................................................................................2720.501001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GCAGC---------------AACA---------------------------------------------------------------GCAGCCACAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G..................................................................................................................................................................................................................................................................................................................2230.331001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................AGCAGC---------------AACA---------------------------------------------------------------GCAGCCACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGCCACAGC-----------------.................................................................................................................................................................................................................................................................................2150.201000000000000000000010000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCACAGC-----------------TA-C------------------------AGCAGCA..............................................................................................................................................................................................................................................1960.171001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AGCAG----------------------------------------------CAGAAGCAACA----------------------------------GC---A------------GC------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCAGCAAC------------AGCAGCCGCAGCAGC---------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.141001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GC---A------------GC------------AACAGCAGCCGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.141001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................CAG----------------------------------------------CAGAAGCAACA----------------------------------GC---A------------GC------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.131000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GCAGCCGCAGCAGCAAC------------AGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................GCAGCCGCAGCAGC---------------AACA---------------------------------------------------------------GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AG----------------------------------------------CAGAAGCAACA----------------------------------GC---A------------GC------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.101000000000100000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................GCAACA----------------------------------GC---A------------GC------------AACAGCAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.091001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GC---A------------GC------------AACAGCAGCCGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.051000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCAGCAAC------------AGCAGCCGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.051000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................GC------------AACAGCAGCCGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................GCAAC------------AGCAGCCGCAGCAGC---------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................ACA----------------------------------GC---A------------GC------------AACAGCAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000010000000000000000000000000000000000000000000
droMoj3
TGA-C--AGC-A---GCTACA---G---CAGCC----GCCCCTGCAC-----CACCCGC-----------------------------------------TGCCAG----TGCGGTGAGCA-----------------------------------------------------------GTGTCA--GCGTCA---------------------------TCCCTG-------CCATCGT----CAGC---------TCGAGCAG------CAGC---A------------GC------------AACAGCAGCAGCACCACC---------------AGCAGCAGTAGCAGCGTAACCG------------------------------CCCC----------------------------------------------AGCTACA------GCTG---------------------------------------------------------------------------------------------GCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGC----------------AGTCTGCTCCAGCGCCTCCT--C-----------------------CACCACCAGCAG------CAACAGCAGC----------------------------------AGC-----AG----CAGTGGCA---------------------------------------------------------------GCGG---CAG---CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................GCAGCAGTAGCAGCGTAACCG------------------------------CC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...............................................................................................................................................................................................................................................GT----CAGC---------TCGAGCAG------CAGC---A------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................................................................................................................................................................................................................G-------CCATCGT----CAGC---------TCGAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................CCCTG-------CCATCGT----CAGC---------TCGAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................................................GT----CAGC---------TCGAGCAG------CAGC---A------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................AGCAG------CAGC---A------------GC------------AACAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC----------------------------------AGC-----AG----CAGTGGC..............................................................................19200.051100000
droGri2
CAG-C--GAC-A---G---CGCCAG------CA----T------CAG-----CGC-CAG-------------------------CTCCAGCTCCACACACGGCTAC----A---GTCTCAA-----------------------------T--CTGCAG-------------------------CTGCATGCCGCCGCCTACAACGACAATT---------------------------TG---A----TGCA------ACAGC---------AGCAGCAACAGCAGCAGCAGCAGCAGCAACAGC------AGCAGCAA---------------C------AGGCGCAAC---------------------------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------GC--AACAA----------------------------------------------------------------------CAGCTGCTGCAGC---------------------------------------------------------------GCTGGCTGGA-TCAGGAGGC---G-------------------------CTGG--CACGTCTAACC-T-------------------CAGCTG------CTGCTGCT-----------------------G-----------CTGC-----AG----CGGGCACA---------------------------------------------------------------ACGG---CAA----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAGGC---G-------------------------CTGG--CACGTCTA...................................................................................................................................................................................2111.00101
.........................................................................................................................................................................................................................................................................................................................GCAGCAA---------------C------AGGCGCAAC---------------------------------------------------------------------------------------------A-------------------------------------------------------------------------------------------------------------GC--AACA.....................................................................................................................................................................................................................................................................................................................................................................................................2430.33110
droAna3
GAA-A-A--C----GG---GC---C---CGGGA----G------CGCTGCCA----GGC-------------------------CAGCTCCG----ACGTCGGCCA-----------CGGCG--------------GGCCCGGAAC---CCTGCACCGCCT-------------------------------------------------------------------GAAGGAACAGCAG---C----AGGA------CAAGCAG------AAGC---A------------GG------------ACCAGCAGCAGCAG---------------GACCAGCAGCAGCTGAACC---------------AGCA---------------------------------------------------------------GCAGCAGAACCAGCAGCAGCAG---------------------------------------------------------------------------------------------G-----------------------------------------------------------------------------------------------------------------------------------------------ACCA------------------------GCAGTA---G--------------CTGAACCAGCCGCATCT--A-----------------------AACCAGCAGCAG------CTGAACCAGC----------------------------------AGC-----AG----CTGAACCA---------------------------------------------------------------GCAG---CAG--CTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................CAG---C----AGGA------CAAGCAG------AAGC---A------------GG------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22180.224310000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGC----------------------------------AGC-----AG----CTGAACCA---------------------------------------------------------------GC............2260.171010000
...................................................................................................................................................................................................................................................................................C---A------------GG------------ACCAGCAGCAGCAG---------------GA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.171000001
..........................................................................................CG----ACGTCGGCCA-----------CGGCG--------------GGCCCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.171100000
........................................................................................................................................................................................................................................................................................................................AGCAGCAG---------------GACCAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.171100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGCAGCAG------CTGAACCAGC----------------------------------...................................................................................................2260.171010000
................................................GCCA----GGC-------------------------CAGCTCCG----ACGTCGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131010000
....................................................................................CAGCTCCG----ACGTCGGCCA-----------CGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131001000
.........................................................GC-------------------------CAGCTCCG----ACGTCGGCCA-----------CGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131010000
................................................GCCA----GGC-------------------------CAGCTCCG----ACGTCGGCCA-----------CG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.131010000
....................................................................................................................................................................................................................................................C----AGGA------CAAGCAG------AAGC---A------------GG------------AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.112020000
...............................................................................................................................................................................................................................................AG---C----AGGA------CAAGCAG------AAGC---A------------GG------------ACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24180.112110000
....................................................................................................................................................................................................................................GAAGGAACAGCAG---C----AGGA------CAAGCAG------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.111010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAGCAG------CTGAACCAGC----------------------------------...................................................................................................21100.101010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGC----------------------------------AGC-----AG----CTGAACCA---------------------------------------------------------------GC............21100.101010000
................................................................................................................................................................................................................................................................................................................................................ACCAGCAGCAGCTGAACC---------------AGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.101010000
...................................................................................................TCGGCCA-----------CGGCG--------------GGCCCGGAAC---C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.091010000
...........................................................................................................................................................................................................................................................GA------CAAGCAG------AAGC---A------------GG------------ACCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.091100000
.........................................................................................................................................................................................................................................................AGGA------CAAGCAG------AAGC---A------------GG------------ACCAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26120.081010000
.......................................................................................................CCA-----------CGGCG--------------GGCCCGGAAC---CC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.081010000
...........................................................................................................................................................................................................................................CAGCAG---C----AGGA------CAAGCAG------AAGC---A------------GG------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.071010000
...................................................................................................................................................................................................................................................................CAAGCAG------AAGC---A------------GG------------ACCAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22150.071100000
...........................................................................................................................................................................................................................................................GA------CAAGCAG------AAGC---A------------GG------------ACCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.071010000
............................................................................................................................................................................................................................................AGCAG---C----AGGA------CAAGCAG------AAGC---A------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.061100000
...............................................................................................................................................................................................................................................AG---C----AGGA------CAAGCAG------AAGC---A------------GG------------AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23180.061100000
.........................................................................................................................................................................................................................................................AGGA------CAAGCAG------AAGC---A------------GG------------ACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061010000
...............................................................................................................................................................................................................................................AG---C----AGGA------CAAGCAG------AAGC---A------------GG------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061100000
................................................................................................................................................................................................................................................G---C----AGGA------CAAGCAG------AAGC---A------------GG------------ACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23180.061010000
droBip1
CGA-C--GGC-G---GCCACT---A---CGGCC----G------CT-GCC-------------------------------------------------GG----CCTGTTGCCGAGTAGT---TTAGCCGCTGCCGCCTCC--------GTGCTGCAG----------------------------------------------------------------------CAG-------------------CA------CCAGC---------AGCAGCA---------GCAGCAA------CAGC------ATCAACAG---------------C------AGATGCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC--AGCAG-------------------------------------------------------------------------------CAG------------------------------------------------------------------CAACATCAG----------------------------------------------------------------------------------------CACCACCACCACCAGCAGC-----------TA-----------CACT-----CA----CA-----CACACCACAGTCGGCCACCCACCATACACCCCACTCCCATGCCACCCACAACCACTTGCTCAGCTCGT---TGC--GCSizeHit CountTotal NormTotal
No Reads
droKik1
A--GCAA--CA-GCAG---CA---GCAGCAGCA-ACAG------CC-AGCGGCCGC----------------------------------------------------------------------------------CA------------------------------------------------------------CCAACGGCAACTCAACCAGTAGCTCCA-ACAACAATCCCAG----CAA------------------------CAAC---A---GCAGCAGCAACAA------CAGC------AACGACAG------------------------CAGCAGC---------------------------------------------------------------------------------------------AA---------------------------TCCT----------------------------------------------------ACGGTTCCAGCCCCCTTGGGCAGCAGC--AGCAAT----------------------------------------GGCA------GCAATA------------------------------------ATAAC-----------------CA-TGCTAGCGTT-GCCG------------------------------------------------------------------------------------------------------CCAGCAATCCTGG--------CCAGCAGCA--------GCAGCAGCAGCGGCACACC-----GA----T------G---------------------------------------------------------------CCAA---TGCCCTTSizeHit CountTotal NormTotal
No Reads
droFic1
A--ACAG--CA-ACAG---CA---G---CCAG------------CAA-----CTGCCGC-------------------------CGGCAGCG----ACGT----------------------------------------------------------------------------------------------------TCAACGA----------------------CGTGAGCAACAG----------CAGCACCAACAGC---------AAC---A---------GCTGCGG------CACGGCCAGCAGCAACCA---------------GACGAACAACAGCACCACC---------------AACA---------------------------------------------------------------GCAGCCACAGCAGC---------------------------------------------AGTGCGATCAG----------------------CAGC---------------------CAATCCACAAT----------------------------------------GACG------GCAGCC------------------------------------ACATC-----------------CG-CATCGG---------------------------------------------------------------------CGCCAG--CGGGAGCAACAT--------------------------------CCGCAGCAGTAGCA-----------------G-----------CAGC-----AG----CAGCAGCA---------------------------------------------------------------TCGA---TGG--CCSizeHit CountTotal NormTotal
No Reads
droEle1
A--ACGA--CC-ACGT---TG---CCGGCCACC-----------AC-CGCTT----TGC-------------------------CAGCGGCA----GCTGCCACAT----TGGCCACC-------------------------------------ACCG---------------------------------CA---------------------------GCG--ATCCAC------CAA----------------------CAGAGGCAGCAGC---A------------GCAA------CAGC------AGCAGCAG---------------------CAGCAGCACC---------------------------------------------------------------------------------------------ACCACC---------------------------------------------------------------------------------------------------------------AC-CACCCGATCCATCAGATTCACCCAGGCGGTGCCGGAGCCA---------------------------------------------------------TTGGTTGCCACCAA---AT------CAATC-GC-GCCACG-GCAC------------------------------------------------------------------------------------------------------CGGCACCACTGCAACTC----------------------GGCG--GTCCGGTGAATCCCAGCTTCG---------------------------------------------------------------TGGA---TG---CCSizeHit CountTotal NormTotal
No Reads
droRho1
CGG-C--CGC-G---CTGAGC---G---CCTTCGCCGG------TC-CGCTGCCGC----------------------------------------------------------------------------------TG-------------C------CCCAGAGTCCCACGG----------------------------------AGT------------TCGGGCACCACCACCAG----CAGC---------ACCACCAG------CAGC---A------------CC------------AGCAGCACCAGCAG---------------------------CACCAGC------------------------------------------------------------------------------------------ACCACC---------------------------------------------------------------------------------------------------------------TG-CACCGCAGCAACCAG-TTCTTCAACGCGATG-----GCCA---------------------------------------------------------TGGCCTACCACCTG--------CCGC-------CGC---------CGCCGCCACCGCCG-----------------------------CCG----CCCGAG--TCGCGGTCACCG--------------------------------CCGCCGCCGGGCGT-----G-----------------------GCCC-----AG----TACCCGCA---------------------------------------------------------------CCCC---CAC--CCSizeHit CountTotal NormTotal
No Reads
droBia1
TGG-C--AGC-A---GTGAAT---G---CGGCC----G------CC-GCCAA----TGC-------------------------TG-----------------------------GAGTGG-----------------------------------------------------------GCGCGG--GAGTGG---------------------------CCTCCGTGGTCACTCAACAA----CAGC---------AACAGC---------AGC---A------------------------------------GCAACAACAACAGCAGGTTCAGGCCCAGAATCCAACCC---------------AGCA---------------------------------------------------------------GCAACAACAACAGG---------------------------------------------------------------------------------------------------CGGCGGT------------------------------------------------GGCTGCGGCAGCGGCG--------------------------------------------------GC---GGCGGCTGCCAGCGCT-GCAG------------------------------------------------------------------------------------------------------CCAATAATATAAGCGCTGATGTCAGCACAA--------G------------CACCAC-----TG----G-----GA---------------------------------------------------------------CCAA---TAC--GASizeHit CountTotal NormTotal
No Reads
droTak1
CAA-T--ATC-AACAG---CC---C---CAGCA----G------TC-GGCTGCGCCCAC-------------------------AT------------------AC----CATATAATCGG-------------------------------------------------------------------AGGCGA-------------CGATC------------TCGCCCAGCAGCAGCAG----------CAACACCAACAGC---------AGC---A---------GCAACAA------CAGC------AGCAGCAG---------------C------AACAAC------------------------------------AAGTTGTAATGCATCA------------------------------------CCAGCAGCATCA---------------------------------------AGTGCAGCAGGTTCATTAT----------------------CAGC---------------------------------------------------------------------------A------GCAGCC------------------------------------GGATC-----------------CC-CAGCAG----C--------------AGCAGCAACAGCAA----------------------------------------------------------------------------------------TTGCACCTGGAGCAACAGC-----------AA-----------CAGC-----AA----CAATATGT---------------------------------------------------------------GCAA---CAC---CSizeHit CountTotal NormTotal
No Reads
droEug1
CAG-C--TAT-G---ACGATG---G------CC----G------CC-TGTTA----TGCCAACTACG---------------------ACAT----GT--CGTCCC-TGTC--G-CACGGCATGTC------------GG---CCC---------------------------------------------------------------------------------TGTCCGCCCTACAG----CAGC---------AGCAGCAG------CAGC---A------------AC------------AACAGCAGCAGCAGCAAC---------------AGCAGCAGCAGCAGC---ACAG---------------------------------------------------------------------------TCAGACGCAGCA----------------------------------------------------------------------------------------------------------GC--AGC-----------------------------------------------------------------------------------------------------------------------------------ACAGCCAAACGC---------------------------------------------------------------------------------------------AG---------CAGCAGCATCACCACCAG----------------------------C-----AG----C------A---------------------------------------------------------------ACAG---CAA--CASizeHit CountTotal NormTotal
No Reads
dm3
A--ACAG--CA-ACAG---TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------CAACAGCG----ATATCGCCGC----T---GGCTCAG-----------------------------GTGCAGCAGCA-------------------------------------------------------------------GCAGCAACAGCAG---T----TGCA------ACAGCAG------CAGC---A------------AC------------AGCAGTTGCAACAG---------------CAGCAGCAACAGCAGTTGC---------------AACA---------------------------------------------------------------GCAGCAGCAACAGCTCCAGCAGCTGCAGCAACAGCAGTTCCAGCAGCAACAATTGCAGCAACAACAGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAA------CAACAGT-----------------------TG-----------CAGC-----AG----CAGCAACA---------------------------------------------------------------GCAG---CAA---CSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------CAACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..........A-ACAG---TC---A---CCGCA----G------CAG-----CGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACAG--CA-ACAG---TC---A---CCGCA----G------CAG-----CGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
......G--CA-ACAG---TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGCAGCTGCAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCA----G------CAG-----CGTCCAC-------------------------CAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCA----G------CAG-----CGTCCAC-------------------------CAACAGCG----ATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.........CA-ACAG---TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............G---TC---A---CCGCA----G------CAG-----CGTCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGCAACAACAGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA.........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGCAACAACAGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...........................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CA----G------CAG-----CGTCCAC-------------------------CAACAGCG----ATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................GCG----ATATCGCCGC----T---GGCTCAG-----------------------------G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCA----G------CAG-----CGTCCAC-------------------------CAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................CCGC----T---GGCTCAG-----------------------------GTGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............G---TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................C----T---GGCTCAG-----------------------------GTGCAGCAGCA-------------------------------------------------------------------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................GC----T---GGCTCAG-----------------------------GTGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACAG---TC---A---CCGCA----G------CAG-----CGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCTCCAGCAGCTGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACAG---TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------CA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAACAGT-----------------------TG-----------CAGC-----AG----CAGCAACA---------------------------------------------------------------..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......G--CA-ACAG---TC---A---CCGCA----G------CAG-----CGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAACAACAGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAA------CAACA..........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CA-ACAG---TC---A---CCGCA----G------CAG-----CGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....CAG--CA-ACAG---TC---A---CCGCA----G------CAG-----CGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAA------CAACAGT-----------------------TG-----------CAGC-----AG----CA...................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ACAG---TC---A---CCGCA----G------CAG-----CGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....CAG--CA-ACAG---TC---A---CCGCA----G------CAG-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............ACAG---TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------CAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CAGCG----ATATCGCCGC----T---GGCTCAG-----------------------------GTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........A-ACAG---TC---A---CCGCA----G------CAG-----CGTCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............AG---TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------CAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................GCA----G------CAG-----CGTCCAC-------------------------CAACAGCG----ATATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAA------CAACAGT-----------------------T................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............ACAG---TC---A---CCGCA----G------CAG-----CGTCCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGT-----------------------TG-----------CAGC-----AG----CAGCAACA---------------------------------------------------------------GCAG---CA.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AGCG----ATATCGCCGC----T---GGCTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAA------CA.............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CGCA----G------CAG-----CGTCCAC-------------------------CAACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
A--ACAG--CA-ACAG---TC---A---CCGCA----G------CAG-----CGTCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................A---CCGCA----G------CAG-----CGTCCAC-------------------------CAACAGCG----AT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................GGCTCAG-----------------------------GTGCAGCAGCA-------------------------------------------------------------------GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................CAACAGCG----ATATCGCCGC----T---GGCTCAG-----------------------------G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CGC----T---GGCTCAG-----------------------------GTGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGCAGCTGCAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........A-ACAG---TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAA------CAACAGT-----------------------TG-----------CAGC-----A..........................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CA-ACAG---TC---A---CCGCA----G------CAG-----CGTCCAC-------------------------C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.....AG--CA-ACAG---TC---A---CCGCA----G------CAG-----C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................G----ATATCGCCGC----T---GGCTCAG-----------------------------GTGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAA------CAACAGT-----------------------TG-----------CAGC-----A..........................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TATCGCCGC----T---GGCTCAG-----------------------------GTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------CAACAGT-----------------------TG-----------CAGC-----AG----CAGA.................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAACAGT-----------------------TG-----------CAGC-----AG----CA...................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGT-----------------------TG-----------CAGC-----AG----CAGCAACA---------------------------------------------------------------..............2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................................................................................................CAGCAG------CAGC---A------------AC------------AGCAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
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droSim2
A--GCAG--CA-ACAG---TC---A---CCGCA----G------CAA-----CGTCCAC-------------------------CAACAGCG----ATATCGCCGC----T---GGCTCAG-----------------------------GTGCAGCAG----------------------------------------------------------------------CAGCAGCAACAGCAGT----TGCA------ACAGC---------AGCAGCA------------ACAG------CTCC------A---GCAG---------------------------CTGCAGC------------------------------------------------------------------------------------------AACA---------------------GCAGTTCCAGCAGCAACAACTGCAACAACAGCAGTTC----------------------CAGC---------------------------------------------------------------------------A---------ACA-----------------------------------------ACAGT----------------------------------------TGCAGCAA------------------------------------------CAGCAACT--G-----------------------CAGCAACAGCAG------CAGCAACAGCAACAGC----------------------------TGC-----AG----CAACAGCA---------------------------------------------------------------GCAG---CAA---CSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................ACAGC---------AGCAGCA------------ACAG------CT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1861.00600000600000000000
........................................................CAC-------------------------CAACAGCG----ATATCGCCGC----T---G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..........................................................................................................................................................................................................................................................GCA------ACAGC---------AGCAGCA------------ACAG------CTCC------A---G..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAG------CAGCAACAGC.....................................................................................................................................19200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA------------------------------------------CAGCAACT--G-----------------------CAGCA............................................................................................................................................................18200.05100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG------CAGCAACAGCAAC..................................................................................................................................21200.05100000000000100000
........................................................................................................................................................................................................................................................................................................................A---GCAG---------------------------CTGCAGC------------------------------------------------------------------------------------------AAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
droSec2
G--CCGC--CA-GT-----------------GC----G------CG-TCCTT----TGT--------------------TCCCC------CA----ATGGTCGCATCATGT-------------TTACCCGCAATTCCTG---CCCGAA-TCGC------ACCAGAATCAC-----------------------------------------------------------AACAGCAACA---------TGCAACACCAGCAGCAG------CAGC---A------------GC------------------------AA------------------------------C------ACTACTACCAGCAACAGCAGCAACAGCAGGTTGCCCACAATCATAGCCATCATCACATGACTGCCGCTTACTACCAACAGCAGCAACAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------CAACAGCAG----------------------------------------------------------------------------------------CAGCAGCAACACCAGCAAGTTTGCTGCAG------------GACAGC-----AG----CAGCAGCA---------------------------------------------------------------GCAT---TCG--CCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....GC--CA-GT-----------------GC----G------CG-TCCTT----TGT--------------------TCCCC------T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
...................................................................................................................................................................................................................................................................................................................................................................................................................CCATCATCACATGACTGCCGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACCAACAGCAGCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------CAACAGCA........................................................................................................................................................................................................................................22200.1020020
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------------------------CAACAGCAG----------------------------------------------------------------------------------------C..............................................................................................................................................24200.0510010
droYak3
G--CCGC--CA-GT-----------------GC----G------CG-TCCTT----TGT--------------------TCCCC------CA----ATGGTCGCATCATGT-------------TTACCCGCAATTCCTG---CCCGAA-TCGC------ACCAGAATCAC-----------------------------------------------------------AACAGCAACA---------TGCA------ACACC---------AGCAGCA------------GCAG------CA------------GCAA------------------CAGCAACAGCAAC------ACTACTACCAGCAACAGCAGCAACAGCAGGTTGCCCACAATCATAGCCATCATCACATGACTACCGCTTACTACCAAC----------------------------------------------------------------------------------------------------------------------AGC------------------------------------------------------------------------------------------------------------------------------------------AGC---------AACAGCAACAGCAG----------------------------------------------------------------------------------------CAGCACCAGCA--AGT--------------TG------TAGCA--G------GC----CAGCAGCA---------------------------------------------------------------ACAT---TCG--CCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------AACAGCAACAGCAG----------------------------------------------------------------------------------------CAGC...........................................................................................................................................21200.10202000000000
.............................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAACAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100000000
.....................................................................................................................................................................................................................................................................................GCA------------GCAG------CA------------GCAA------------------CAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000000000
droEre2
TCAGC--AGC-AACAT----C---A---CGGCC----A------TC-CGTTGCATC----------------------------------------------------------------------------------CG---CATCAT-ACAC----------------------------------------------------------------------------ACCAGCAACA----------------------------------GC---A------------AC------------AACAGCAGCAGCAGCAGCAGC------------AGCCGCCGCAAC------ACCACCAGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGC---ACG-----------------CA-CAGCAG----C--------------AGCAGCAGCAGCA-TCATGCCGCCCAGCTGGCCCACACACTCTCC-------------------------TCGGCCGCCGCTGCCGCTGCAGCCGGAAACAGC-------------------------------------------GGT-----GG----CAACACCA---------------------------------------------------------------ACACCCACTCC-ATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........AACAT----C---A---CGGCC----A------TC-CGTTGCATC----------------------------------------------------------------------------------CG---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGC---ACG-----------------CA-CAGCAG----C--------------AGC..................................................................................................................................................................................................................................................2711.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGC---ACG-----------------CA-CAG...........................................................................................................................................................................................................................................................................1911.0010000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGCCGCTGCAGCCGGAAACAGC-------------------------------------------GGT-----G..........................................................................................2911.0010000010
....................C---A---CGGCC----A------TC-CGTTGCATC----------------------------------------------------------------------------------CG---CATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---ACG-----------------CA-CAGCAG----C--------------AGCAGCA..............................................................................................................................................................................................................................................2411.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACTCTCC-------------------------TCGGCCGCCGCT...................................................................................................................................................................2211.0010010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGCTGCAGCCGGAAACAGC-------------------------------------------GGT-----...........................................................................................2611.0010010000
............ACAT----C---A---CGGCC----A------TC-CGTTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGC---ACG-----------------CA-CAGCAG----C--------------AGCAGC...............................................................................................................................................................................................................................................2711.0010000100
.........................................................................................................................................................................................................................................................................................................................................................CGCAAC------ACCACCAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5011000000
..................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530000030
..........................................................................................................................................................................................................................................GCAACA----------------------------------GC---A------------AC------------AACAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1021100000
...................................................................................................................................................................................................................................................................................C---A------------AC------------AACAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000020
.......................................................................................................................................................................................................................................................................................................................................................................CACCAGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCA..........................................................................................................................................................................................................................................................................................................26130.0811000000
..................................................................................................................................................................................................................................................................................................................................................................................GCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGC---AC...................................................................................................................................................................................................................................................................................................19190.0511000000
...............................................................................................................................................................................................................................................A----------------------------------GC---A------------AC------------AACAGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000
...........................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGC---.....................................................................................................................................................................................................................................................................................................24200.0510100000
......................................................................................................................................................................................................................................................................................................................................................................CCACCAGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA................................................................................................................................................................................................................................................................................................................21200.0510000010
............................................................................................................................................................................................................................................AACA----------------------------------GC---A------------AC------------AACAGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000010
......................................................................................................................................................................................................................................................................................................................................................................CCACCAGCAGCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC.................................................................................................................................................................................................................................................................................................................20200.0510001000
...............................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCA..........................................................................................................................................................................................................................................................................................................18200.0511000000
.......................................................................................................................................................................................................................................................................................A------------AC------------AACAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100
............................................................................................................................................................................................................................................AACA----------------------------------GC---A------------AC------------AACAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000
....................................................................................................................................................................................................................................................................................................AC------------AACAGCAGCAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000
.................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAACAGCAGC---A....................................................................................................................................................................................................................................................................................................19200.0510001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-CAGCAG----C--------------AGCAGCAGCAGC.........................................................................................................................................................................................................................................21200.0510000010
.......................................................................................................................................................................................................................................................................................A------------AC------------AACAGCAGCAGCAGCAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000
.........................................................................................................................................................................................................................................AGCAACA----------------------------------GC---A------------AC------------AACAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000000
...............................................................................................................................................................................................................................................A----------------------------------GC---A------------AC------------AACAGCAGCAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000010
..................................................................................................................................................................................................................................................................................GC---A------------AC------------AACAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100
..............................................................................................................................................................................................................................................................................................................................................................C------ACCACCAGCAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000

Generated: 05/18/2015 at 05:58 AM