ID:

dps_2978

 Coordinate:

XR_group6:1390583-1390651 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.1 -11.6 -11.1

Flybase annnotation

exon [dpse_GLEANR_12688:1]; CDS [Dpse\GA21163-cds]; exon [dpse_GLEANR_12688:2]; CDS [Dpse\GA21163-cds]; intron [Dpse\GA21163-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------##################################################
TTCCTGCTGCTGCTGTGCGGCACTGCCTTGGCAGCCGACAGCTACGATGGGTGAGTAAGATGGGAGAGAGGATGGACTGGTGTAGTACCAGATGAGTGACGGTAGCGGATCATCCATAGTTACAAGATCTACGACATCAATACGCGCACCGTGTTCGAGAAGGAGCTGC
**************************************************.....................(((((.((((....((((...........))))....)))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M022
male body		 GSM343916
embryo
 M059
embryo
.................................................................................................................................................GCACCGTGTTCGAGAAGG...... 18 0 1 4.00 4 4 0 0 0 0
TTCCTGCTGCTGCTGTGCGG..................................................................................................................................................... 20 0 1 4.00 4 4 0 0 0 0
.......................................................................................................................................ATCAATACGCGCACCGTGTTCGAGAAGG...... 28 0 1 4.00 4 4 0 0 0 0
.........................................................................................................................................CAATACGCGCACCGTGTTCGAGAAGG...... 26 0 1 3.00 3 3 0 0 0 0
.........................................................................................................................................CAATACGCGCACCGTGTTCGAGAAG....... 25 0 1 3.00 3 3 0 0 0 0
......................................................................................................................................CATCAATACGCGCACCGTGTT.............. 21 0 1 3.00 3 3 0 0 0 0
.........................................................................................................................................CAATACGCGCACCGTGTTCGAGAAGGA..... 27 0 1 3.00 3 3 0 0 0 0
..............................................................................................................................ATCTACGACATCAATACGCGCACCGTGTT.............. 29 0 1 2.00 2 1 1 0 0 0
.................................................................................................................................................GCACCGTGTTCGAGAAGGAG.... 20 0 1 2.00 2 2 0 0 0 0
...................................................................................................................ATGGTTACAAGATCTACGACATC............................... 23 1 1 2.00 2 2 0 0 0 0
..CCTGCTGCTGCTGTGCGG..................................................................................................................................................... 18 0 1 2.00 2 2 0 0 0 0
.................................................................................GTAGTACCAGATGAGTGACGGT.................................................................. 22 0 1 2.00 2 2 0 0 0 0
................................................................................................................................CTACGACATCAATACGCGCACCGTGTTC............. 28 0 1 2.00 2 1 1 0 0 0
..............................................................................................................................ATCTACGACATCAATACGCGCACC................... 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................GATCTACGACATCAATACGCGCACCGT................. 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................ACAAGATCTACGACATCAATGCGA........................ 24 2 1 1.00 1 0 0 0 0 1
................................................................................................................................CTACGACATCAATACGCGCAC.................... 21 0 1 1.00 1 1 0 0 0 0
......................................................................................................................GTTACAAGATCTACGACATCAATACGC........................ 27 0 1 1.00 1 1 0 0 0 0
....................CACTGCCTTGGCAGCCGACAG................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
......................................................................................................................GTTACAAGATCTACGACATCAAT............................ 23 0 1 1.00 1 1 0 0 0 0
............................TGGCAGCCGACAGCTACGATG........................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
..................................................................................................................GATGGTTACAAGATCTACGA................................... 20 2 1 1.00 1 1 0 0 0 0
....................................................................................................................................GACATCAATACGCGCACCGTGTTCGA........... 26 0 1 1.00 1 1 0 0 0 0
...........GCTGTGCGGCACTGCCTT............................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................ATCTACGACATCAATACGCG....................... 20 0 1 1.00 1 1 0 0 0 0
..........................................TAAGATGGTAGAGTAAGATGGGAG....................................................................................................... 24 3 1 1.00 1 1 0 0 0 0
...........................................................................................................................................ATACGCGCACCGTGTTCGAGAAGG...... 24 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................AATACGCGCACCGTGTTCGAGAA........ 23 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................GACATCAATACGCGCACCGT................. 20 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................ATCTACGACATCAATACGCGC...................... 21 0 1 1.00 1 1 0 0 0 0
TTCCTGCTGCTGCTGTGCGGC.................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................GACATCAATACGCGCACCGTGT............... 22 0 1 1.00 1 1 0 0 0 0
..CCTGCTGCTGCTGTGCGGCACT................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................ATACGCGCACCGTGTTCGAGAAG....... 23 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................GCGCACCGTGTTCGAGAAG....... 19 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................CAATACGCGCACCGTGTTCGAGAAGGAG.... 28 0 1 1.00 1 1 0 0 0 0
.............................GGCAGCCGACAGCTACGAT......................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
......................................................................................................................GTTACAAGATCTACGACATCAA............................. 22 0 1 1.00 1 1 0 0 0 0
........................................GCTACGATGGGTGAGTAAGATGGGA........................................................................................................ 25 0 1 1.00 1 0 0 0 1 0
.....................................................................................................................................ACATCAATACGCGCACCGT................. 19 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................CAATACGCGCACCGTGTT.............. 18 0 1 1.00 1 1 0 0 0 0
..........TGCTGTGCGGCACTGCCTTGGC......................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.......TGCTGCTGTGCGGCACTGCCTT............................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................GATCTACGACATCAATACGCGCACCGG................. 27 1 1 1.00 1 1 0 0 0 0
..................................................................................................................GATGGTTACAAGATCTACGACAT................................ 23 2 1 1.00 1 1 0 0 0 0
...........................................................................................................................................ATACGCGCACCGTGTTCGAGA......... 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................GATCTACGACATCAATACGCGCACC................... 25 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................ATCTACGACATCAATACGCGCACCGT................. 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................................CGATGGTTACAAGATCTACGAC.................................. 22 2 1 1.00 1 1 0 0 0 0
.......TGCTGCTGTGCGGCACTGCC.............................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................ATACGCGCACCGTGTTCGAGAAGGA..... 25 0 1 1.00 1 1 0 0 0 0
................................................................................................................ACGATGGTTACAAGATCTACGACAT................................ 25 3 1 1.00 1 1 0 0 0 0
......................................................................................................................GTTACAAGATCTACGACAT................................ 19 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................AATACGCGCACCGTGTTCGA........... 20 0 1 1.00 1 1 0 0 0 0
..........TTCTGTGCGGCACTGCCTTGGC......................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0
................................................................................................................................................CGCACCGTGTTCGAGAAGGA..... 20 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................GATCTACGACATCAATACGC........................ 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................CAATACGCGCACCGTGTTCGAGAA........ 24 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................AATACGCGCACCGTGTTCGAGAAGGAGC... 28 0 1 1.00 1 1 0 0 0 0
..............GTGCGGCACTGCCTTGGCAGCCGACA................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................ATCAATACGCGCACCGTGTT.............. 20 0 1 1.00 1 0 1 0 0 0
........GCTGCTGTGCGGCACTGCCTTGGCA........................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
..............................GCAGCCGACAGCTACGATG........................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
................................................................................................................................CTACGACATCAATACGCGCACCGT................. 24 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................AAGATCTACGACATCAATACGC........................ 22 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................ATACGCACACCGTGTTCGAGAAGG...... 24 1 1 1.00 1 0 1 0 0 0
................................................................................................................................CTACGACATCAATACGCGCACCGTGTT.............. 27 0 1 1.00 1 0 1 0 0 0
.....GCTGCTGCTGTGCGGCACTGCCTT............................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................ACAAGATCTACGACATCAATACG......................... 23 0 1 1.00 1 0 0 1 0 0
................................................................................................................ACGATGGTTACAAGATCTACGAC.................................. 23 3 2 0.50 1 1 0 0 0 0
.......................................................................................................................AGACCAGATCTACGACATCA.............................. 20 3 5 0.20 1 0 0 0 1 0

Anti-sense strand reads

AAGGACGACGACGACACGCCGTGACGGAACCGTCGGCTGTCGATGCTACCCACTCATTCTACCCTCTCTCCTACCTGACCACATCATGGTCTACTCACTGCCATCGCCTAGTAGGTATCAATGTTCTAGATGCTGTAGTTATGCGCGTGGCACAAGCTCTTCCTCGACG
**************************************************.....................(((((.((((....((((...........))))....)))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body
............................................................................................................................................ATGCGCGTGGCACGAGCCCTTC....... 22 2 1 1.00 1 1 0
.............................................................................................................................................TGCGCGTGGCACGAGCCCTTC....... 21 2 3 0.67 2 1 1
.........................................................................................................................................AGTATGCGCGTGGGACAAG............. 19 3 5 0.40 2 2 0
.............................................................................................................................................TGCGCGTGGCACGAGCCCTT........ 20 2 3 0.33 1 1 0
......................................................................................................................................................CGCAAGCTCTTCCGCGAGG 19 3 20 0.05 1 1 0
.................................................................................................................GGTATCCATGGTCTAGACG..................................... 19 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XR_group6:1390533-1390701 - dps_2978 TTCCTGCTGCTGCTG---TGCGGC---ACTGCCTTGGCAGCCGAC---AGCTACGATGGGTGAGTAAGATGGGA---G-----------AGAGG----ATGGA---------CTGGT----------------------------------GT-------------------AG--TAC---CAGATG-AGTGACGGTAGCGGAT-CATCCATAGTTACAAGATCTACGACATCAATACGCGCACCGTGTTCGAGAAGGAGCTGC
droPer2 scaffold_12:2079819-2079987 - TTCCTGCTGCTGCTG---TGCGGC---ACTGCCTTGGCAGCCGAC---AGCTACGATGGGTGAGTAAGATGGGA---G-----------GGAGG----ATGGA---------CTGGT----------------------------------GT-------------------AG--TAC---CAGATG-AGTGACGGTAGCGGAT-CATCCATAGTTACAAGATCTACGACATCAATACGCGCACCGTGTTCGAGAAGGAGCTGC
droWil2 scf2_1100000004511:5906899-5907061 - TT---GCTGCTATTA---TGCAGT---GTTGCCTTGGCAGCCGAT---AGCTACGATGGGTGAGTTAGCAA------TATTATCATAGAT------------------------GAT----------------------------------TCAC-----ATCTCTTTACATCTTG--GCCC----T--------------TTT-TTTTTGTTAGCTACAAAATCTATGATATTATTGCGAGTAATGCATTTGAGAAGCAAATCT
droVir3 scaffold_13049:5368415-5368591 - dvi_18479 TGCCTGCTGCTGCTGCTCTGCGGCGTCATCGCTCTGTCCGCCCAT---GACTACGAGGGGTGAGTGGAGCT------GGTCTTTGTGGATTGTCCATT-----CTGCGTCAGCTTAT----------------------------------GTCC-----AG----------------TTAA----TTT--------------C-CAATTTGCAGCTACAAGATTTACGACATCAAGGCGGACAACAGCTTCAAGAAGGAGCTGC
droMoj3 scaffold_6680:3728644-3728825 - TGCCTGCTGCTGCTGGTGTGCAGCGTCGCTGCGCTGTCTGCGCAC---AGCTACGATGGGTGAGTGCTTGG------GGGCGTGGCTGGTTGGC----AAAGAATGCATCAGCTAAT----------------------------------GCAC-----AA----------------TTAA----CTT------GGTA----A-CTCTCGACAGCTACAAGATCTATGACATCTATGCACGCAACAACTTCGAGAAGCAGCTGC
droGri2 scaffold_15110:13630172-13630341 + T-GCTGCTGCTCCTC---TGCGGCATTGTGTCGCTGTCCGCCCAC---GGTTACGAGGGGTGAGTCGTGTGTGA---A-----------GTGGC----AACGT---------CTTCT----------------------------------TA-------------------GT--TAG---CTAATG-TGCGGTGTTATTTCA--CATTTGCAGGTATAAGATTTACGACATCAATGCACGCAACTCCTTTGAGAAGCAGCTAC
droAna3 scaffold_13337:16183123-16183309 - CTGCTGCTGCTGCTG---ATCGGT---GTGGCCTTGGCCGCCGAT---AGCTACGATGGGTGAGTTATCCCTCGGAATA-CC------------TA--------------------TACGATTACTTATAATTGTTATATTTCAAAGTCAAA--AATTAAAT----------AA-----------------------TATACTA-CCCTTAACAGATACAAGGTCTACGACATCAAATCGCGAAATGCCTTCGAAAAGCAGGTGC
droBip1 scf7180000396589:251383-251550 + CTGGTGCTGCTGCTG---ATCGGT---GTGGCCTTGGCCGCCGAT---AGCTACGATGGGTAAGTTATCCCCCGGAATA-CA------------TA--TTAGA---------C-GATACAATTATT----------------------AAAG--G-----AT----------AA-----------------------TATTCTA-TCCTAAACAGATACAAGGTCTACGACGTCAAATCACGAAATGCCTTTGAGAAACAGGTGC
droKik1 scf7180000301706:63449-63613 - TTGGTGCTGCTCCTC---TGCGGC---GTGGCCCTGGCGGGCCAG---AGCTACGATGGGTGAGTTTTTCGAAA---G-----------GA-G------TAGAATG-AT---CAGGC----------------------------------AT-------------------CC--TAA---ATGATTT------GTAAA-TTCT-TTCCTACAGCTACAAGATCTACGATGTGCAGGCCCGCAATTCCTTTGAGAAGCAGCTGC
droFic1 scf7180000453819:6836-6893 + GTGGTGCTGCTGCTC---AGCGGC---GTGGCCTTGGCTACCGAC---AACTACGACGGGTGAGTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491193:2634383-2634439 - TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAGCTATAAGATCTACGACATCAATACGCGAAATGCCTTTGAGAAGCAGCTGT
droRho1 scf7180000778172:53559-53616 - CTGGTGCTGCTGCTG---AGCGGC---GTGGCCTTGGCGGCCGAC---AACTACGACGGGTGAGTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302193:6326830-6326885 - CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGTTACAAGATCTACGACATCAATGCTCGCAATGCCTTCGAGAAGCAGCTGC
droTak1 scf7180000415773:253477-253533 + TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGTTACAAGATCTACGACATCCATGCTCGCAATGCCTTCGAGAAGCAGCTTC
droEug1 scf7180000409006:72483-72540 + GTAGTGCTGCTGTTC---AGCGGC---GTGGCCTTGGCAGCCACC---AGCTACGATGGGTGAGTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3L:7396669-7396728 - TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTACAGCTACAAGATCTACGACATCAATGCTCGCAACGCTTTTGAGAAGCAGCTGC
droSim2 3l:7261636-7261713 - GCGGTGCTCCTGCTG---GCCAGC---GTGGCCTTGGCGGTGGAC---GACTACGAGGGGTGAGTGAACCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGAGGTGGAGTGGT
droSec2 scaffold_2:7326798-7326857 - TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTGCAGCTACAAGATCTACGACATCAATGCTCGCAACTCTTTTGAGAAGCAGCTGC
droYak3 3L:8000195-8000254 - TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATAGCTACAAGATCTACGACATCACTGCTCGGAATGCCTTTGAGAAGCAGTTCC
droEre2 scaffold_4784:3951760-3951919 - T----GCTCCTTTTG---GGCGCC---ACTCTTGTGGCTGCCGATCAGGATTACGAGGGGTAAGTATGGCA------G-------TCACTGATCCAT--------CCAGGAACTAGT-------------------------------TACG--G-----AT----------TT------AA----TG------------TGATT-CGCTTCCAGTTACCGCATTTATGAGGTGACACCCTCGAGTGTC---GACCAGGCACACC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TTCCTGCTGCTGCTG---TGCGGC---ACTGCCTTGGCAGCCGAC---AGCTACGATGGGTGAGTAAGATGGGA---G-----------AGAGG----ATGGA---------CTGGT----------------------------------GT-------------------AG--TAC---CAGATG-AGTGACGGTAGCGGAT-CATCCATAGTTACAAGATCTACGACATCAATACGCGCACCGTGTTCGAGAAGGAGCTGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................GCACCGTGTTCGAGAAGG......1814.0040400000000
TTCCTGCTGCTGCTG---TGCGG..................................................................................................................................................................................................................................................2014.0040400000000
.......................................................................................................................................................................................................................................ATCAATACGCGCACCGTGTTCGAGAAGG......2814.0040400000000
.........................................................................................................................................................................................................................................CAATACGCGCACCGTGTTCGAGAAGG......2613.0030300000000
.........................................................................................................................................................................................................................................CAATACGCGCACCGTGTTCGAGAAG.......2513.0030300000000
......................................................................................................................................................................................................................................CATCAATACGCGCACCGTGTT..............2113.0030300000000
.........................................................................................................................................................................................................................................CAATACGCGCACCGTGTTCGAGAAGGA.....2713.0030300000000
..............................................................................................................................................................................................................................ATCTACGACATCAATACGCGCACCGTGTT..............2912.0020100001000
.................................................................................................................................................................................................................................................GCACCGTGTTCGAGAAGGAG....2012.0020200000000
..CCTGCTGCTGCTG---TGCGG..................................................................................................................................................................................................................................................1812.0020200000000
.......................................................................................................................................................GT-------------------AG--TAC---CAGATG-AGTGACGGT...................................................................2212.0020200000000
................................................................................................................................................................................................................................CTACGACATCAATACGCGCACCGTGTTC.............2812.0020100001000
..............................................................................................................................................................................................................................ATCTACGACATCAATACGCGCACC...................2411.0010100000000
.............................................................................................................................................................................................................................GATCTACGACATCAATACGCGCACCGT.................2711.0010100000000
................................................................................................................................................................................................................................CTACGACATCAATACGCGCAC....................2111.0010100000000
......................................................................................................................................................................................................................GTTACAAGATCTACGACATCAATACGC........................2711.0010100000000
.......................C---ACTGCCTTGGCAGCCGAC---AG.......................................................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................GTTACAAGATCTACGACATCAAT............................2311.0010100000000
..................................TGGCAGCCGAC---AGCTACGATG...............................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................GACATCAATACGCGCACCGTGTTCGA...........2611.0010100000000
...........GCTG---TGCGGC---ACTGCCTT......................................................................................................................................................................................................................................1811.0010100000000
..............................................................................................................................................................................................................................ATCTACGACATCAATACGCG.......................2011.0010100000000
...........................................................................................................................................................................................................................................ATACGCGCACCGTGTTCGAGAAGG......2411.0010100000000
..........................................................................................................................................................................................................................................AATACGCGCACCGTGTTCGAGAA........2311.0010100000000
....................................................................................................................................................................................................................................GACATCAATACGCGCACCGT.................2011.0010100000000
..............................................................................................................................................................................................................................ATCTACGACATCAATACGCGC......................2111.0010100000000
TTCCTGCTGCTGCTG---TGCGGC---..............................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................GACATCAATACGCGCACCGTGT...............2211.0010100000000
..CCTGCTGCTGCTG---TGCGGC---ACT...........................................................................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................................................ATACGCGCACCGTGTTCGAGAAG.......2311.0010100000000
...............................................................................................................................................................................................................................................GCGCACCGTGTTCGAGAAG.......1911.0010100000000
.........................................................................................................................................................................................................................................CAATACGCGCACCGTGTTCGAGAAGGAG....2811.0010100000000
...................................GGCAGCCGAC---AGCTACGAT................................................................................................................................................................................................................1911.0010100000000
......................................................................................................................................................................................................................GTTACAAGATCTACGACATCAA.............................2211.0010100000000
.................................................GCTACGATGGGTGAGTAAGATGGGA---............................................................................................................................................................................................2511.0010000100000
.....................................................................................................................................................................................................................................ACATCAATACGCGCACCGT.................1911.0010100000000
.........................................................................................................................................................................................................................................CAATACGCGCACCGTGTT..............1811.0010100000000
..........TGCTG---TGCGGC---ACTGCCTTGGC...................................................................................................................................................................................................................................2211.0010100000000
.......TGCTGCTG---TGCGGC---ACTGCCTT......................................................................................................................................................................................................................................2211.0010100000000
.............................................................................................................................................................................................................................GATCTACGACATCAATACGCGCACCGG.................2711.0010100000000
...........................................................................................................................................................................................................................................ATACGCGCACCGTGTTCGAGA.........2111.0010100000000
.............................................................................................................................................................................................................................GATCTACGACATCAATACGCGCACC...................2511.0010100000000
..............................................................................................................................................................................................................................ATCTACGACATCAATACGCGCACCGT.................2611.0010100000000
.......TGCTGCTG---TGCGGC---ACTGCC........................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................ATACGCGCACCGTGTTCGAGAAGGA.....2511.0010100000000
......................................................................................................................................................................................................................GTTACAAGATCTACGACAT................................1911.0010100000000
..........................................................................................................................................................................................................................................AATACGCGCACCGTGTTCGA...........2011.0010100000000
................................................................................................................................................................................................................................................CGCACCGTGTTCGAGAAGGA.....2011.0010100000000
.............................................................................................................................................................................................................................GATCTACGACATCAATACGC........................2011.0010100000000
.........................................................................................................................................................................................................................................CAATACGCGCACCGTGTTCGAGAA........2411.0010100000000
..........................................................................................................................................................................................................................................AATACGCGCACCGTGTTCGAGAAGGAGC...2811.0010100000000
..............G---TGCGGC---ACTGCCTTGGCAGCCGAC---A........................................................................................................................................................................................................................2611.0010100000000
.......................................................................................................................................................................................................................................ATCAATACGCGCACCGTGTT..............2011.0010000001000
........GCTGCTG---TGCGGC---ACTGCCTTGGCA..................................................................................................................................................................................................................................2511.0010100000000
....................................GCAGCCGAC---AGCTACGATG...............................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................CTACGACATCAATACGCGCACCGT.................2411.0010100000000
...........................................................................................................................................................................................................................AAGATCTACGACATCAATACGC........................2211.0010100000000
................................................................................................................................................................................................................................CTACGACATCAATACGCGCACCGTGTT..............2711.0010000001000
.....GCTGCTGCTG---TGCGGC---ACTGCCTT......................................................................................................................................................................................................................................2411.0010100000000
.........................................................................................................................................................................................................................ACAAGATCTACGACATCAATACG.........................2311.0011000000000
droPer2
TTCCTGCTGCTGCTG---TGCGGC---ACTGCCTTGGCAGCCGAC---AGCTACGATGGGTGAGTAAGATGGGA---G-----------GGAGG----ATGGA---------CTGGT----------------------------------GT-------------------AG--TAC---CAGATG-AGTGACGGTAGCGGAT-CATCCATAGTTACAAGATCTACGACATCAATACGCGCACCGTGTTCGAGAAGGAGCTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................TACAAGATCTACGACATC...............................1812.002200000
....................................................................................................................................................................................................................................GACATCAATACGCGCACCGTGTT..............2311.001000001
...................................................................................................................................................................................................................ATAGTTACAAGATCTACGAC..................................2011.001000001
.................................................................................................................................................................................................................................................GCACCGTGTTCGAGAAGGA.....1911.001000001
droWil2
TT---GCTGCTATTA---TGCAGT---GTTGCCTTGGCAGCCGAT---AGCTACGATGGGTGAGTTAGCAA------TATTATCATAGAT------------------------GAT----------------------------------TCAC-----ATCTCTTTACATCTTG--GCCC----T--------------TTT-TTTTTGTTAGCTACAAAATCTATGATATTATTGCGAGTAATGCATTTGAGAAGCAAATCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................GTAATGCATTTGAGAAGCAAAT..22118.0018041400
...................................................................................................................................................................................................................................................AATGCATTTGAGAAGCAAAT..20113.0013031000
.........CTATTA---TGCAGT---GTTGCCTTGGC...................................................................................................................................................................................................................................2315.00500410
..........TATTA---TGCAGT---GTTGCCTTGGC...................................................................................................................................................................................................................................2214.00400400
................................................................................................................................................................................................................................CTATGATATTATTGCGAGT......................1913.00300300
..........................................................................................................................................................................................................................CAAAATCTATGATATTATTGCGA........................2313.00302100
................................................................................................................................................................................................................................CTATGATATTATTGCGAGTA.....................2013.00300300
.......................................................................................................................................................................................................................CTACAAAATCTATGATATTATTGCGAGT......................2813.00302100
......................................................................................................................................................................................................................GCTACAAAATCTATGATATTATTGCGA........................2712.00202000
.................................................................................................................................................................................................................................................GTAATGCATTTGAGAAGCA.....1912.00200200
........GCTATTA---TGCAGT---GTTGCCTT......................................................................................................................................................................................................................................2112.00201100
...................................GGCAGCCGAT---AGCTACGATGGC.............................................................................................................................................................................................................2212.00200110
.........................................................................................................................................................................................................................ACAAAATCTATGATATTATTGCGA........................2412.00201100
.................................................................................................................................................................................................................................................GTAATGCATTTGAGAAGCAA....2012.00200200
......................................AGCCGAT---AGCTACGATGGC.............................................................................................................................................................................................................1912.00202000
....................................................................................................................................................................................................................................GATATTATTGCGAGTAATGC.................2012.00201100
....................................................................................................................................................................................................................................................ATGCATTTGAGAAGCAAAT..1912.00202000
...................................................................................................................................................................................................................................................AATGCATTTGAGAAGCAAATC.2111.00100100
................................................................................................................................................................................................................................CTATGATATTATTGCGAGTAAT...................2211.00100100
..........................................................................................................................................................................................................................CAAAATCTATGATATTATTGCG.........................2211.00101000
........................................................................................................................................................................................................................TACAAAATCTATGATATTATTGCG.........................2411.00100100
.........CTATTA---TGCAGT---GTTGCCTTG.....................................................................................................................................................................................................................................2111.00100100
...............................................................................................................................................................................................................................................GAGTAATGCATTTGAGAAGCAAAT..2411.00101000
........GCTATTA---TGCAGT---GTTGCCTTGGC...................................................................................................................................................................................................................................2411.00100100
..............................................................................................................................................................................................................................ATCTATGATATTATTGCGA........................1911.00101000
................................................................................................................................................................................................................................CTATGATATTATTGCGAGTAATGC.................2411.00101000
.................................................................................................................................................................................................................................TATGATATTATTGCGAGTAAT...................2111.00100100
...........ATTA---TGCAGT---GTTGCCTTGGC...................................................................................................................................................................................................................................2111.00100010
..........................................................................................................................................................................................................................................ATTGCGAGTAATGCATTTG............1911.00101000
.................................................................................................................................................................................................................................................GTAATGCATTTGAGAAGC......1811.00101000
.......................................................................................................................................................................................................................CTACAAAATCTATGATATTATTGC..........................2411.00101000
.........................................................................................................................................................................................................................ACAAAATCTATGATATTATTGCGAGT......................2611.00101000
...........................................................................................................................................................................................................................................TTGCGAGTAATGCATTTGAGAAGC......2411.00100100
....................................................................................................................................................................................................................................GATATTATTGCGAGTAATGCATTTGA...........2611.00101000
.......................................GCCGAT---AGCTACGATGGC.............................................................................................................................................................................................................1811.00100010
......................................AGCCGAT---AGCTACGATGGGTGAGTTAGC....................................................................................................................................................................................................2811.00100100
......................................AGCCGAT---AGCTACGATGG..............................................................................................................................................................................................................1811.00101000
.............................................................................................................................................................................................................................................GCGAGTAATGCATTTGAGAAGC......2211.00101000
....................................................................................................................................................................................................................................GATATTATTGCGAGTAATG..................1911.00101000
....................................................................................................................................................................................................................................GATATTATTGCGAGTAATGCAT...............2211.00100100
...........................................................................................................................................................................................................................AAAATCTATGATATTATTGCGA........................2211.00101000
................................................................................................................................................................................................................................................AGTAATGCATTTGAGAAGC......1911.00101000
......................................................................................................................................................................................................................GCTACAAAATCTATGATATTATTGC..........................2511.00101000
..........TATTA---TGCAGT---GTTGCCTT......................................................................................................................................................................................................................................1911.00101000
......................................................................................................................................................................................................................GCTACAAAATCTATGATATT...............................2011.00101000
...........................................................................................................................................................................................................................AAAATCTATGATATTATTC...........................1920.50101000
droVir3
TGCCTGCTGCTGCTGCTCTGCGGCGTCATCGCTCTGTCCGCCCAT---GACTACGAGGGGTGAGTGGAGCT------GGTCTTTGTGGATTGTCCATT-----CTGCGTCAGCTTAT----------------------------------GTCC-----AG----------------TTAA----TTT--------------C-CAATTTGCAGCTACAAGATTTACGACATCAAGGCGGACAACAGCTTCAAGAAGGAGCTGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................GACATCAAGGCGGACAACAG.................20112.0012002000000000003202000120000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTACGACATCAAGGCGGACAACAG.................2418.008000000000000000600100000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................GATTTACGACATCAAGGCGGACAACAG.................2717.007000000000000003201100000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CATCAAGGCGGACAACAG.................1817.007000000000000002300000110000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTACGACATCAAGGCGGACAACA..................2314.004000000000000000100000000000000000000000000000000000000000000030
....................................................................................................................................................................................................................................GACATCAAGGCGGACAACA..................1913.003000000000000000100010010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TACGACATCAAGGCGGACAACA..................2212.002000000000000000010000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................ATTTACGACATCAAGGCGGACAACAG.................2612.002001000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CGACATCAAGGCGGACAACAG.................2112.002000000000000000100000001000000000000000000000000000000000000000
........................GTCATCGCTCTGTCCGCC...............................................................................................................................................................................................................................1812.002100000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................ATCAAGGCGGACAACAGC................1812.002100000000000001000000000000000000000000000000000000000000000000
..........................CATCGCTCTGTCCGCCCAT---GACTACGA.................................................................................................................................................................................................................2712.002000000000000001000010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TACGACATCAAGGCGGACAACAG.................2312.002000000000000001001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ACAAGATTTACGACATCAAGGCGGA.......................2512.002001000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTACGACATCAAGGCGGACAACAGC................2512.002002000000000000000000000000000000000000000000000000000000000000
........................GTCATCGCTCTGTCCGCCCAT---GA.......................................................................................................................................................................................................................2312.002100100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GACATCAAGGCGGACAAC...................1812.002000000000000000001000100000000000000000000000000000000000000000
..............GCTCTGCGGCGTCATCGCTCT......................................................................................................................................................................................................................................2112.002001000000000000010000000000000000000000000000000000000000000000
.................CTGCGGCGTCATCGCTCTGTC...................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................ATCAAGGCGGACAACAGCT...............1911.001000000000000001000000000000000000000000000000000000000000000000
........................GTCATCGCTCTGTCCGCCC..............................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TTTACGACATCAAGGCGGACAACAG.................2511.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................ATTTACGACATCAAGGCGGA.......................2011.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AAGATTTACGACATCAAGGCGGACAACAG.................2911.001000100000000000000000000000000000000000000000000000000000000000
.........................................CCAT---GACTACGAGGGGTGAGT........................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................GCTCTGTCCGCCCAT---GACTAC...................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................ACATCAAGGCGGACAACAGC................2011.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................ACATCAAGGCGGACAACAG.................1911.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................AGATTTACGACATCAAGGCGGACAACAG.................2811.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GATTTACGACATCAAGGCGGACAACAGC................2811.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................CAACAGCTTCAAGAAGGAG....1911.001000000000000000010000000000000000000000000000000000000000000000
.............................CGCTCTGTCCGCCCAT---GACTA....................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................GCTACAAGATTTACGACATCAAGGC..........................2511.001000100000000000000000000000000000000000000000000000000000000000
..............GCTCTGCGGCGTCATCGCTCTGTCCGCCC..............................................................................................................................................................................................................................2911.001100000000000000000000000000000000000000000000000000000000000000
..........TGCTGCTCTGCGGCGTCATCGCT........................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
......CTGCTGCTGCTCTGCGGCGTCAT............................................................................................................................................................................................................................................2311.001000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................AGATTTACGACATCAAGGCGGA.......................2211.001000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................ACGACATCAAGGCGGACAACAGCTTCA............2711.001000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TTTACGACATCAAGGCGGA.......................1911.001000000000000001000000000000000000000000000000000000000000000000
................TCTGCGGCGTCATCGCTCTGTCCGCC...............................................................................................................................................................................................................................2611.001000000000000000100000000000000000000000000000000000000000000000
..........................CATCGCTCTGTCCGCCCAT---GACTACG..................................................................................................................................................................................................................2611.001000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................GGCGGACAACAGCTTCAAGAAG.......2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CATCAAGGCGGACAACAGCTTCAA...........2411.001000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................TACAAGATTTACGACATCAAGGCGG........................2511.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................ATTTGCAGCTACAAGATT........................................1811.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................TCCATT-----CTGCGTCAGCTTAT----------------------------------GTCC-----AG----------------.......................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
..............................................................AGTGGAGCT------GGTCTTTGTG..................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................ATCAAGGCGGACAACAGCTTC.............2111.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................CAAGATTTACGACATCAAGGCGGA.......................2411.001000000000000000000000010000000000000000000000000000000000000000
.................CTGCGGCGTCATCGCTCTGTCCGC................................................................................................................................................................................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
................TCTGCGGCGTCATCGCTCTGTCCGC................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................CATCGCTCTGTCCGCCCAT---.........................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CTACAAGATTTACGACATCAAGGCGGA.......................2711.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................TACAAGATTTACGACATCAAGGC..........................2311.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TACGACATCAAGGCGGACAACAGC................2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CGGACAACAGCTTCAAGAAGGG.....2211.001010000000000000000000000000000000000000000000000000000000000000
.................CTGCGGCGTCATCGCTCTGTCCGCC...............................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
..............................GCTCTGTCCGCCCAT---GACTACGA.................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................ACAACAGCTTCAAGAAGGAGC...2111.001000000000000000001000000000000000000000000000000000000000000000
......CTGCTGCTGCTCTGCGGC.................................................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ACAAGATTTACGACATCAAGGC..........................2211.001000000000000000010000000000000000000000000000000000000000000000
.................CTGCGGCGTCATCGCTCTGTCCGCCCAT---.........................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..............GCTCTGCGGCGTCATCGCTCTGTCCGC................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CATCAAGGCGGACAACAGCT...............2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................AGATTTACGACATCAAGGCGGACAACA..................2711.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GACATCAAGGCGGACAACAGC................2111.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................GCTACAAGATTTACGACATCAA.............................2211.001000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTACGACATCAAGGCGGAC......................1911.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TACAAGATTTACGACATCAAGGCGGAC......................2711.001000000000000000000010000000000000000000000000000000000000000000
........................GTCATCGCTCTGTCCGCCCAT---.........................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TTTACGACATCAAGGCGGACAACAGC................2611.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ACAAGATTTACGACATCAA.............................1911.001000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TACGACATCAAGGCGGACA.....................1920.501000000000000000100000000000000000000000000000000000000000000000
TGCCTGCTGCTGCTGCTCT......................................................................................................................................................................................................................................................1930.331001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGCCTGCTGCTGCTGGTGTGCAGCGTCGCTGCGCTGTCTGCGCAC---AGCTACGATGGGTGAGTGCTTGG------GGGCGTGGCTGGTTGGC----AAAGAATGCATCAGCTAAT----------------------------------GCAC-----AA----------------TTAA----CTT------GGTA----A-CTCTCGACAGCTACAAGATCTATGACATCTATGCACGCAACAACTTCGAGAAGCAGCTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................CTATGACATCTATGCACGCAAC...................2218.008800000
................................................................................................................................................................................................................................CTATGACATCTATGCACGCAA....................2115.005500000
.........................................................................................................................................................................................................................................CTATGCACGCAACAACTTCGAGAA........2413.003300000
.....................AGCGTCGCTGCGCTGTCTGCGCAC---A........................................................................................................................................................................................................................2513.003200001
................................................................................................................................................................................................................................CTATGACATCTATGCACGC......................1913.003300000
..............................................................................................................................................................................................................................ATCTATGACATCTATGCACG.......................2012.002200000
.......................CGTCGCTGCGCTGTCTGCGCA.............................................................................................................................................................................................................................2112.002200000
.............................................................................................................................................................................................................................GATCTATGACATCTATGCACG.......................2112.002200000
..............................................................................................................................................................................................................................................CACGCAACAACTTCGAGAA........1912.002100001
.......................................................................................................................................................................................................................................ATCTATGCACGCAACAACTTCGAGAA........2612.002200000
.GCCTGCTGCTGCTGGTGTGCAGCGTCGC............................................................................................................................................................................................................................................2812.002000002
.......TGCTGCTGGTGTGCAGCGTCGCTGCGCT......................................................................................................................................................................................................................................2811.001100000
....................CAGCGTCGCTGCGCTGTCTGC................................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................ACATCTATGCACGCAACAACTTCGAGAA........2811.001100000
.............................................................................................................................................................................................................................................GCACGCAACAACTTCGAGAA........2011.001100000
.....................AGCGTCGCTGCGCTGTCTGCGCAC---AGC......................................................................................................................................................................................................................2711.001100000
......CTGCTGCTGGTGTGCAGCGTCGCTGCG........................................................................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................................................................GATCTATGACATCTATGCACGCAAC...................2511.001000001
..............................................................................................................................................................................................................................................CACGCAACAACTTCGAGAAGC......2111.001100000
.........................................................................................................................................................................................................................................CTATGCACGCAACAACTTCGAGA.........2311.001100000
.................GTGCAGCGTCGCTGCGCTGTCTGCG...............................................................................................................................................................................................................................2511.001100000
...........................................................GTGAGTGCTTGG------GGGCGTGGCT..................................................................................................................................................................................2211.001000001
......CTGCTGCTGGTGTGCAGCGTCGCT...........................................................................................................................................................................................................................................2411.001100000
........................................................................................................................................................................................................................................TCTATGCACGCAACAACTTCGAGA.........2411.001100000
..............................................................................................................................................................................................................................ATCTATGACATCTATGCACGCAAC...................2411.001100000
.....................AGCGTCGCTGCGCTGTCTGCGCAC---.........................................................................................................................................................................................................................2411.001100000
........................GTCGCTGCGCTGTCTGCGCAC---.........................................................................................................................................................................................................................2111.001100000
....................CAGCGTCGCTGCGCTGTCTGCGCAC---A........................................................................................................................................................................................................................2611.001000001
....................CAGCGTCGCTGCGCTGTCTGCGCAC---AG.......................................................................................................................................................................................................................2711.001000001
..............................................................................................................................................................................................................................ATCTATGACATCTATGCACGC......................2111.001100000
..CCTGCTGCTGCTGGTGTGCAGCGTC..............................................................................................................................................................................................................................................2511.001100000
.....GCTGCTGCTGGTGTGCAGCGTCGC............................................................................................................................................................................................................................................2411.001100000
..................TGCAGCGTCGCTGCGCTGTCTGCGCAC---A........................................................................................................................................................................................................................2811.001000001
..........................................................................................................................................................................................................................................TATGCACGCAACAACTTCGA...........2011.001100000
.............................................................................................................................................................................................................................GATCTATGACATCTATGCACGC......................2211.001000010
........................GTCGCTGCGCTGTCTGCGCAC---AG.......................................................................................................................................................................................................................2311.001100000
...........GCTGGTGTGCAGCGTCGCTGC.........................................................................................................................................................................................................................................2111.001000001
...........GCTGGTGTGCAGCGTCGCT...........................................................................................................................................................................................................................................1911.001100000
......................GCGTCGCTGCGCTGTCTGCGC..............................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................TCTATGCACGCAACAACTTCGA...........2211.001100000
...............GTGTGCAGCGTCGCTGCGCTGTCTGCG...............................................................................................................................................................................................................................2711.001000001
................................................................................................................................................................................................................................CTATGACATCTATGCACGCAACAACTT..............2711.001100000
.................................CTGTCTGCGCAC---AGCTACGATG...............................................................................................................................................................................................................2211.001100000
..............................................................................................................................................................................................................................ATCTATGACATCTATGCACGCAA....................2311.001100000
..............................................................................................................................................................................................................................ATCTATGACATCTATGCACGCAACAACTT..............2911.001100000
......CTGCTGCTGGTGTGCAGCGTCGCTGC.........................................................................................................................................................................................................................................2611.001000001
.....................AGCGTCGCTGCGCTGTCTGCGCAC---AG.......................................................................................................................................................................................................................2611.001100000
........GCTGCTGGTGTGCAGCGTCGCTGC.........................................................................................................................................................................................................................................2411.001100000
.GCCTGCTGCTGCTGGTGTGCAGCGT...............................................................................................................................................................................................................................................2511.001100000
...................................GTCTGCGCAC---AGCTACGATG...............................................................................................................................................................................................................2011.001100000
............CTGGTGTGCAGCGTCGCTGCGCT......................................................................................................................................................................................................................................2311.001000001
.............................................................................................................................................................................................................................GATCTATGACATCTATGCACGCAA....................2411.001100000
.................................................................................................................................................................................................................................TATGACATCTATGCACGC......................1811.001100000
droGri2
T-GCTGCTGCTCCTC---TGCGGCATTGTGTCGCTGTCCGCCCAC---GGTTACGAGGGGTGAGTCGTGTGTGA---A-----------GTGGC----AACGT---------CTTCT----------------------------------TA-------------------GT--TAG---CTAATG-TGCGGTGTTATTTCA--CATTTGCAGGTATAAGATTTACGACATCAATGCACGCAACTCCTTTGAGAAGCAGCTACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CTGCTGCTGCTGCTG---ATCGGT---GTGGCCTTGGCCGCCGAT---AGCTACGATGGGTGAGTTATCCCTCGGAATA-CC------------TA--------------------TACGATTACTTATAATTGTTATATTTCAAAGTCAAA--AATTAAAT----------AA-----------------------TATACTA-CCCTTAACAGATACAAGGTCTACGACATCAAATCGCGAAATGCCTTCGAAAAGCAGGTGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................CGCGAAATGCCTTCGAAAAGCA.....2212.002011000
..............................................................................................................................................................................................................................................CGCGAAATGCCTTCGAAAAGCAGGTG.2612.002200000
.............TG---ATCGGT---GTGGCCTTGGCCGCCGA.............................................................................................................................................................................................................................2512.002020000
............................................................................................................................................................................................................................................ATCGCGAAATGCCTTCGAAAAGCA.....2412.002000002
..GCTGCTGCTGCTG---ATCGGT---GT............................................................................................................................................................................................................................................2111.001100000
..............G---ATCGGT---GTGGCCTTGGCCGC................................................................................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................................................GCGAAATGCCTTCGAAAAGCA.....2111.001100000
......................................................................................................................................................................................................................................................GCCTTCGAAAAGCAGGTG.1811.001100000
.....................GGT---GTGGCCTTGGCCGCCGAT---AG.......................................................................................................................................................................................................................2311.001100000
......................................................................................................................................................................................................................GATACAAGGTCTACGACAT................................1911.001100000
...........................................................................................................................................................................................................................AAGGTCTACGACATCAAATCG.........................2111.001100000
............................................................................................................................................................................................................................................ATCGCGAAATGCCTTCGAAAAGCAGGTG.2811.001100000
.............TG---ATCGGT---GTGGCCTTGGCCGCCG..............................................................................................................................................................................................................................2411.001010000
.TGCTGCTGCTGCTG---ATCGGT---GTGGC.........................................................................................................................................................................................................................................2511.001000001
................................................................................................................................................................................................................................................CGAAATGCCTTCGAAAAGCA.....2011.001100000
............CTG---ATCGGT---GTGGCCTTGGCCGCCGA.............................................................................................................................................................................................................................2611.001010000
droBip1
CTGGTGCTGCTGCTG---ATCGGT---GTGGCCTTGGCCGCCGAT---AGCTACGATGGGTAAGTTATCCCCCGGAATA-CA------------TA--TTAGA---------C-GATACAATTATT----------------------AAAG--G-----AT----------AA-----------------------TATTCTA-TCCTAAACAGATACAAGGTCTACGACGTCAAATCACGAAATGCCTTTGAGAAACAGGTGCSizeHit CountTotal NormTotal
No Reads
droKik1
TTGGTGCTGCTCCTC---TGCGGC---GTGGCCCTGGCGGGCCAG---AGCTACGATGGGTGAGTTTTTCGAAA---G-----------GA-G------TAGAATG-AT---CAGGC----------------------------------AT-------------------CC--TAA---ATGATTT------GTAAA-TTCT-TTCCTACAGCTACAAGATCTACGATGTGCAGGCCCGCAATTCCTTTGAGAAGCAGCTGCSizeHit CountTotal NormTotal
No Reads
droFic1
GTGGTGCTGCTGCTC---AGCGGC---GTGGCCTTGGCTACCGAC---AACTACGACGGGTGAGTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATAGCTATAAGATCTACGACATCAATACGCGAAATGCCTTTGAGAAGCAGCTGTSizeHit CountTotal NormTotal
No Reads
droRho1
CTGGTGCTGCTGCTG---AGCGGC---GTGGCCTTGGCGGCCGAC---AACTACGACGGGTGAGTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGTTACAAGATCTACGACATCAATGCTCGCAATGCCTTCGAGAAGCAGCTGCSizeHit CountTotal NormTotal
No Reads
droTak1
TC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAGTTACAAGATCTACGACATCCATGCTCGCAATGCCTTCGAGAAGCAGCTTCSizeHit CountTotal NormTotal
No Reads
droEug1
GTAGTGCTGCTGTTC---AGCGGC---GTGGCCTTGGCAGCCACC---AGCTACGATGGGTGAGTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTACAGCTACAAGATCTACGACATCAATGCTCGCAACGCTTTTGAGAAGCAGCTGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................ACATCAATGCTCGCAACGCTT...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ACAAGATCTACGACATC...............................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................ACAAGATCTACGACATCAATGCTCGC......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CTACGACATCAATGCTCGC......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................GCAACGCTTTTGAGAAGCAGC...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCGGTGCTCCTGCTG---GCCAGC---GTGGCCTTGGCGGTGGAC---GACTACGAGGGGTGAGTGAACCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGGAGGTGGAGTGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................GGCGGTGGAC---GACTACGAGGG..............................................................................................................................................................................................................2111.00100010000000000000
......CTCCTGCTG---GCCAGC---GTGGCCTTGGC...................................................................................................................................................................................................................................2611.00100010000000000000
....................CAGC---GTGGCCTTGGCGGTGGA.............................................................................................................................................................................................................................2111.00100010000000000000
...GTGCTCCTGCTG---GCCAGC---GT............................................................................................................................................................................................................................................2011.00100010000000000000
.........CTGCTG---GCCAGC---GTGGCCTTGGCGGT................................................................................................................................................................................................................................2611.00100010000000000000
..........TGCTG---GCCAGC---GTGGCCTTGGCGGTGGA.............................................................................................................................................................................................................................2811.00100010000000000000
droSec2
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTGCAGCTACAAGATCTACGACATCAATGCTCGCAACTCTTTTGAGAAGCAGCTGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................ATCTACGACATCAATGCTCGCAACT..................2513.0030030
.......................................................................................................................................................................................................................................................CTTTTGAGAAGCAGCTGC1812.0020020
.......................................................................................................................................................................................................................CTACAAGATCTACGACATCAATG...........................2312.0020020
....................................................................................................................................................................................................................................GACATCAATGCTCGCAACT..................1912.0020020
..............................................................................................................................................................................................................................ATCTACGACATCAATGCTC........................1911.0010010
......................................................................................................................................................................................................................................CATCAATGCTCGCAACTCT................1911.0010010
........................................................................................................................................................................................................................TACAAGATCTACGACATCAATGCT.........................2411.0010010
..........................................................................................................................................................................................................................CAAGATCTACGACATCAATGCT.........................2211.0010010
................................................................................................................................................................................................................................CTACGACATCAATGCTCGCAACT..................2311.0010010
.......................................................................................................................................................................................................................CTACAAGATCTACGACATCAATGCT.........................2511.0010010
.......................................................................................................................................................................................................................CTACAAGATCTACGACAT................................1811.0010010
..........................................................................................................................................................................................................................CAAGATCTACGACATCAAT............................1911.0010010
.............................................................................................................................................................................................................................GATCTACGACATCAATGCTCTG......................2211.0011000
.......................................................................................................................................................................................................................................ATCAATGCTCGCAACTCTTT..............2011.0010010
.................................................................................................................................................................................................................................TACGACATCAATGCTCGCAACT..................2211.0011000
................................................................................................................................................................................................................................................CGCAACTCTTTTGAGAAGCA.....2011.0010010
...........................................................................................................................................................................................................................AAGATCTACGACATCAATGCTCGCAACT..................2811.0010010
................................................................................................................................................................................................................................CTACGACATCAATGCTCGCA.....................2011.0010010
.........................................................................................................................................................................................................................ACAAGATCTACGACATCAAT............................2011.0010010
droYak3
TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATAGCTACAAGATCTACGACATCACTGCTCGGAATGCCTTTGAGAAGCAGTTCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................CTACGACATCACTGCTCGG......................19122.0022022000000000
................................................................................................................................................................................................................................CTACGACATCACTGCTCGGA.....................20116.0016014000110000
.......................................................................................................................................................................................................................CTACAAGATCTACGACATCACTGCTCGG......................28115.001509000060000
........................................................................................................................................................................................................................TACAAGATCTACGACATCACTGCTCGGA.....................28110.0010000000100000
.............................................................................................................................................................................................................................GATCTACGACATCACTGCTCGG......................2218.00808000000000
...........................................................................................................................................................................................................................................CTGCTCGGAATGCCTTTGAGAAGC......2418.00830000050000
.......................................................................................................................................................................................................................CTACAAGATCTACGACATCACT............................2218.00812000050000
................................................................................................................................................................................................................................CTACGACATCACTGCTCGGAATGC.................2417.00704000030000
........................................................................................................................................................................................................................TACAAGATCTACGACATCACTGCTCGG......................2715.00504000010000
.......................................................................................................................................................................................................................................ATCACTGCTCGGAATGCCTTTGAGA.........2515.00513000010000
..............................................................................................................................................................................................................................ATCTACGACATCACTGCTCGGA.....................2215.00504000010000
.........................................................................................................................................................................................................................................CACTGCTCGGAATGCCTTTGAGA.........2315.00521000020000
..............................................................................................................................................................................................................................ATCTACGACATCACTGCTCGG......................2114.00404000000000
....................................................................................................................................................................................................................................GACATCACTGCTCGGAATGCCTTTGAGA.........2814.00400000040000
......................................................................................................................................................................................................................GCTACAAGATCTACGACATCACT............................2313.00302000010000
.......................................................................................................................................................................................................................CTACAAGATCTACGACATCACTG...........................2313.00321000000000
........................................................................................................................................................................................................................TACAAGATCTACGACATCACT............................2113.00300000030000
................................................................................................................................................................................................................................................CGGAATGCCTTTGAGAAGC......1913.00302100000000
.................................................................................................................................................................................................................................TACGACATCACTGCTCGGA.....................1913.00302001000000
...........................................................................................................................................................................................................................................CTGCTCGGAATGCCTTTGAGAAGCA.....2513.00302001000000
.........................................................................................................................................................................................................................................CACTGCTCGGAATGCCTTTGAGAAGCA.....2713.00311000010000
......................................................................................................................................................................................................................................CATCACTGCTCGGAATGCCT...............2013.00301000020000
.......................................................................................................................................................................................................................CTACAAGATCTACGACATCACTGCTCGGA.....................2913.00300000030000
....................................................................................................................................................................................................................................GACATCACTGCTCGGAATGCCT...............2213.00301000020000
.......................................................................................................................................................................................................................................ATCACTGCTCGGAATGCCTTTGAGAAGC......2813.00300000030000
.........................................................................................................................................................................................................................................CACTGCTCGGAATGCCTTTGAGAAGC......2613.00301000020000
.........................................................................................................................................................................................................................ACAAGATCTACGACATCACTGCTCGGA.....................2713.00300000030000
.............................................................................................................................................................................................................................GATCTACGACATCACTGCTCGGAATGC.................2713.00301000020000
.............................................................................................................................................................................................................................GATCTACGACATCACTGCTCGGA.....................2313.00311000010000
.................................................................................................................................................................................................................................TACGACATCACTGCTCGG......................1812.00202000000000
...........................................................................................................................................................................................................................................CTGCTCGGAATGCCTTTGAGA.........2112.00201000010000
........................................................................................................................................................................................................................................TCACTGCTCGGAATGCCTTTGAGAAGCA.....2812.00201000010000
.................................................................................................................................................................................................................................TACGACATCACTGCTCGGAATGCCTT..............2612.00202000000000
..............................................................................................................................................................................................................................ATCTACGACATCACTGCTCGGAATGCCT...............2812.00201000010000
...............................................................................................................................................................................................................................TCTACGACATCACTGCTCGGA.....................2112.00202000000000
................................................................................................................................................................................................................................CTACGACATCACTGCTCGGAAT...................2212.00202000000000
................................................................................................................................................................................................................................CTACGACATCACTGCTCGGAATGCCT...............2612.00201000010000
....................................................................................................................................................................................................................................................ATGCCTTTGAGAAGCAGTTCC2112.00202000000000
....................................................................................................................................................................................................................................GACATCACTGCTCGGAATG..................1912.00201000010000
......................................................................................................................................................................................................................GCTACAAGATCTACGACAT................................1912.00201010000000
..........................................................................................................................................................................................................................................ACTGCTCGGAATGCCTTTGAGA.........2212.00201000010000
.......................................................................................................................................................................................................................................ATCACTGCTCGGAATGCCTTTGA...........2312.00202000000000
.............................................................................................................................................................................................................................................GCTCGGAATGCCTTTGAGAAGCA.....2312.00202000000000
..........................................................................................................................................................................................................................CAAGATCTACGACATCACTGCTCGGA.....................2612.00220000000000
.........................................................................................................................................................................................................................................CACTGCTCGGAATGCCTTTGA...........2112.00201000010000
.............................................................................................................................................................................................................................GATCTACGACATCACTGCTCGGAATGCC................2812.00200000020000
...........................................................................................................................................................................................................................AAGATCTACGACATCACTGCTCGG......................2412.00202000000000
................................................................................................................................................................................................................................CTACGACATCACTGCTCGGAA....................2112.00202000000000
......................................................................................................................................................................................................................................CATCACTGCTCGGAATGCCTTTGA...........2412.00200000020000
................................................................................................................................................................................................................................CTACGACATCACTGCTCGGAATG..................2312.00200000020000
......................................................................................................................................................................................................................GCTACAAGATCTACGACATCACTGCTC........................2711.00101000000000
............................................................................................................................................................................................................................................TGCTCGGAATGCCTTTGAGA.........2011.00101000000000
..........................................................................................................................................................................................................................CAAGATCTACGACATCACTGCTCGGG.....................2611.00110000000000
................................................................................................................................................................................................................................CTACGACATCACTGCTCGGAATGCC................2511.00101000000000
.......................................................................................................................................................................................................................CTACAAGATCTACGACATCAC.............................2111.00100000010000
.......................................................................................................................................................................................................................................ATCACTGCTCGGAATGCCTTTG............2211.00101000000000
.....................................................................................................................................................................................................................................ACATCACTGCTCGGAATGCCTTTGA...........2511.00100100000000
..............................................................................................................................................................................................................................................CTCGGAATGCCTTTGAGAAGC......2111.00101000000000
.................................................................................................................................................................................................................................................GGAATGCCTTTGAGAAGCA.....1911.00101000000000
.......................................................................................................................................................................................................................CTACAAGATCTACGACATCACTGCTCG.......................2711.00101000000000
..............................................................................................................................................................................................................................ATCTACGACATCACTGCTCGGAATGC.................2611.00101000000000
...........................................................................................................................................................................................................................AAGATCTACGACATCACTGCTCGGAAT...................2711.00101000000000
..............................................................................................................................................................................................................................ATCTACGACATCACTGCTCGGAA....................2311.00101000000000
.......................................................................................................................................................................................................................................ATCACTGCTCGGAATGCCTT..............2011.00100000010000
..............................................................................................................................................................................................................................ATCTACGACATCACTGCTCG.......................2011.00100000010000
.............................................................................................................................................................................................................................GATCTACGACATCACTGCT.........................1911.00101000000000
............................................................................................................................................................................................................................................TGCTCGGAATGCCTTTGAGAAGC......2311.00101000000000
.............................................................................................................................................................................................................................GATCTACGACATCACTGCTC........................2011.00101000000000
..........................................................................................................................................................................................................................CAAGATCTACGACATCACTGCTCGGAAT...................2811.00100000010000
.....................................................................................................................................................................................................................................ACATCACTGCTCGGAATGCCT...............2111.00100000010000
......................................................................................................................................................................................................................GCTACAAGATCTACGACATC...............................2011.00101000000000
.....................................................................................................................................................................................................................................ACATCACTGCTCGGAATGCCTT..............2211.00100000010000
........................................................................................................................................................................................................................TACAAGATCTACGACATCACTGCT.........................2411.00101000000000
.............................................................................................................................................................................................................................GATCTACGACATCACTGCTCGGAATG..................2611.00101000000000
......................................................................................................................................................................................................................................................GCCTTTGAGAAGCAGTTCC1911.00100000010000
.........................................................................................................................................................................................................................ACAAGATCTACGACATCACTGC..........................2211.00101000000000
..........................................................................................................................................................................................................................CAAGATCTACGACATCACT............................1911.00101000000000
......................................................................................................................................................................................................................................CATCACTGCTCGGAATGCCTTTGAG..........2511.00100000010000
.......................................................................................................................................................................................................................................ATCACTGCTCGGAATGCCTTTGAG..........2411.00100000010000
...........................................................................................................................................................................................................................AAGATCTACGACATCACTGCTCGGA.....................2511.00101000000000
................................................................................................................................................................................................................................................CGGAATGCCTTTGAGAAGCAGT...2211.00100000010000
......................................................................................................................................................................................................................................CATCACTGCTCGGAATGCCTT..............2111.00100000010000
....................................................................................................................................................................................................................................GACATCACTGCTCGGAATGCCTTTGA...........2611.00101000000000
..........................................................................................................................................................................................................................CAAGATCTACGACATCACTGCT.........................2211.00101000000000
......................................................................................................................................................................................................................................CATCACTGCTCGGAATGCCTTTGAGAAGC......2911.00100000010000
......................................................................................................................................................................................................................................CATCACTGCTCGGAATGCCTTT.............2211.00100000010000
................................................................................................................................................................................................................................................CGGAATGCCTTTGAGAAGCAGTT..2311.00100000010000
.............................................................................................................................................................................................................................GATCTACGACATCACTGCTCGGAAT...................2511.00100000010000
.........................................................................................................................................................................................................................ACAAGATCTACGACATCACTGCTCGG......................2611.00100000010000
................................................................................................................................................................................................................................CTACGACATCACTGCTCGGC.....................2011.00100000100000
...............................................................................................................................................................................................................................TCTACGACATCACTGCTCGG......................2011.00101000000000
......................................................................................................................................................................................................................GCTACAAGATCTACGACATCACTGCTCG.......................2811.00101000000000
.........................................................................................................................................................................................................................ACAAGATCTACGACATCACTGCT.........................2311.00101000000000
.............................................................................................................................................................................................................................................GCTCGGAATGCCTTTGAGAAGCAGTT..2611.00100000010000
......................................................................................................................................................................................................................................CATCACTGCTCGGAATGCC................1911.00101000000000
................................................................................................................................................................................................................................................CGGAATGCCTTTGAGAAGCA.....2011.00101000000000
....................................................................................................................................................................................................................................GACATCACTGCTCGGAATGCC................2111.00100000100000
.......................................................................................................................................................................................................................CTACAAGATCTACGACATCACTGCTC........................2611.00101000000000
..............................................................................................................................................................................................................................................CTCGGAATGCCTTTGAGAAGCA.....2211.00100000010000
..........................................................................................................................................................................................................................................ACTGCTCGGAATGCCTTTG............1911.00101000000000
....................................................................................................................................................................................................................................GACATCACTGCTCGGAATGCCTT..............2311.00101000000000
.............................................................................................................................................................................................................................GATCTACGACATCACTGCTCG.......................2111.00100000010000
......................................................................................................................................................................................................................GCTACAAGATCTACGACATCACTG...........................2411.00101000000000
.........................................................................................................................................................................................................................ACAAGATCTACGACATCACT............................2011.00101000000000
................................................................................................................................................................................................................................CTACGACATCACTGCTCGGAATGA.................2411.00101000000000
...............................................................................................................................................................................................................................TCTACGACATCACTGCTCGGAATGC.................2511.00100000010000
droEre2
T----GCTCCTTTTG---GGCGCC---ACTCTTGTGGCTGCCGATCAGGATTACGAGGGGTAAGTATGGCA------G-------TCACTGATCCAT--------CCAGGAACTAGT-------------------------------TACG--G-----AT----------TT------AA----TG------------TGATT-CGCTTCCAGTTACCGCATTTATGAGGTGACACCCTCGAGTGTC---GACCAGGCACACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................GTTACCGCATTTATGAGGT................................19110.00101000630
............................CTCTTGTGGCTGCCGATCAGGA.......................................................................................................................................................................................................................2217.0076000010
...................................GGCTGCCGATCAGGATTACGAGG...............................................................................................................................................................................................................2316.0063000300
............................CTCTTGTGGCTGCCGATCAGG........................................................................................................................................................................................................................2115.0055000000
...................................GGCTGCCGATCAGGATTACGA.................................................................................................................................................................................................................2114.0042000200
...................................GGCTGCCGATCAGGATTACGAG................................................................................................................................................................................................................2214.0040000220
.........................................................................................................................................................................................................................................GACACCCTCGAGTGTC---GACCAGGC.....2413.0032100000
...................................GGCTGCCGATCAGGATTACGAGGGT.............................................................................................................................................................................................................2513.0031000110
.................................GTGGCTGCCGATCAGGATTACGAGG...............................................................................................................................................................................................................2512.0020000200
............................................................................................................................................................................................................................................ACCCTCGAGTGTC---GACCAGGCA....2212.0020000200
.....................................CTGCCGATCAGGATTACGAGG...............................................................................................................................................................................................................2112.0021000100
.....................................CTGCCGATCAGGATTACGAGGGT.............................................................................................................................................................................................................2312.0020000200
............................................................................................................................................................................................................................................ACCCTCGAGTGTC---GACCAGGC.....2112.0021100000
.........................................................................................................................................................................................................................................GACACCCTCGAGTGTC---GACCAGGCA....2512.0022000000
...........................ACTCTTGTGGCTGCCGATCAGGATTA....................................................................................................................................................................................................................2612.0022000000
................................TGTGGCTGCCGATCAGGA.......................................................................................................................................................................................................................1811.0011000000
..................................TGGCTGCCGATCAGGATTACGA.................................................................................................................................................................................................................2211.0010000100
............................................................................................................................................................................................................................................ACCCTCGAGTGTC---GACCAG.......1911.0011000000
.................................GTGGCTGCCGATCAGGATTACGAGGGT.............................................................................................................................................................................................................2711.0010000100
...................................GGCTGCCGATCAGGATTACGAGGG..............................................................................................................................................................................................................2411.0010001000
......................................TGCCGATCAGGATTACGAGGG..............................................................................................................................................................................................................2111.0011000000
.......................................GCCGATCAGGATTACGAGG...............................................................................................................................................................................................................1911.0010001000
....................................GCTGCCGATCAGGATTACGAG................................................................................................................................................................................................................2111.0011000000
....................................GCTGCCGATCAGGATTACGAGG...............................................................................................................................................................................................................2211.0010000100
................................................................................................................................................................................................................................TTATGAGGTGACACCCTCGAGTGTC---.............2511.0010000100
.................................GTGGCTGCCGATCAGGATTACGAG................................................................................................................................................................................................................2411.0010000100
............................................................................................................................................................................................................................................ACCCTCGAGTGTC---GACCAGGCACC..2411.0010001000
.....................................CTGCCGATCAGGATTACGAGGG..............................................................................................................................................................................................................2211.0010000100
..............................................................................................................................................................................................................................................CCTCGAGTGTC---GACCAGGC.....1911.0011000000
......................................TGCCGATCAGGATTACGA.................................................................................................................................................................................................................1811.0010000010
...........................................ATCAGGATTACGAGGGGT............................................................................................................................................................................................................1811.0010000010
..........TTTTG---GGCGCC---ACTCTTGTGGCTGCC...............................................................................................................................................................................................................................2611.0011000000
.............................................................................................................................................................................................................................................CCCTCGAGTGTC---GACCAGGCAC...2211.0011000000
..............................................................................................................................................................................................................................ATTTATGAGGTGACACCCTCGAGTGT.................2611.0010000100
......................................TGCCGATCAGGATTACGAG................................................................................................................................................................................................................1911.0010000010
...........................ACTCTTGTGGCTGCCGATCAGGAT......................................................................................................................................................................................................................2411.0010100000

Generated: 05/18/2015 at 05:51 AM