dps_2913

exon [dpse_GLEANR_1436:2]; exon [dpse_GLEANR_1436:1]; CDS [Dpse\GA14257-cds]; CDS [Dpse\GA14257-cds]; intron [Dpse\GA14257-in]

##################################################----------------------------------------------------------------------------------------------------------------------------------------------################################################## TGGCCGAGTACGCTGCCAGTAAGGGAGGCTTCGATCGCGTTCTTAAAATGGTAAGAATATAAAGGGAAAAGCAAAACAATTTGAGCGAATTATTTAAAAACGAAGCAGAAAATTAAAAACAGCTGGGGCGGCCGATTACATAATTTTGTTGGTGGTGTATCGATAGTTTACCGCGCATTTAAAATTTTGCAGATTAAAATCACTGGCGGCGGCGACGGACGAGCCATTGGGGAGTTTACTGT ************************************************....................((((((.....((.((((((((((.....((..(((((((...........((((...))))...........)))))))....)).....)))))))...))).)).......))))))..************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M040 female body	GSM343916 embryo	M059 embryo	M062 head	GSM444067 head	V112 male body	M022 male body	SRR902011 testis
................................................................................................................................................................................................................GCGGCGACGGACGAGCCATT..............	20	0	1	1.00	1	1	0	0	0	0	0	0	0
.......GTACGCTGCCAGTAAGGGAGG......................................................................................................................................................................................................................	21	0	1	1.00	1	0	0	0	0	1	0	0	0
.....................................................................................................................................................................................................AATCACTGGCGGCGGCGACGGACGAGCC.................	28	0	1	1.00	1	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................TAAAATCACTGGCGGCGGCGACGGACG.....................	27	0	1	1.00	1	0	0	0	1	0	0	0	0
................................................................................................................................................................................................................................CATTGGGGAGTTTACTGT	18	0	1	1.00	1	0	1	0	0	0	0	0	0
...............................................................................................................................................................................................GATTAAAATCACTGGCGGCGGC.............................	22	0	1	1.00	1	1	0	0	0	0	0	0	0
.......GTACGCTGCCAGTAAGGG.........................................................................................................................................................................................................................	18	0	1	1.00	1	0	0	1	0	0	0	0	0
.....................AGGGAGGCTTCGATCGCGTTCTTAA....................................................................................................................................................................................................	25	0	2	0.50	1	1	0	0	0	0	0	0	0
........................GAGGCTTCGATCGCGTTCTT......................................................................................................................................................................................................	20	0	2	0.50	1	1	0	0	0	0	0	0	0
..................GTAAGGGAGGCTTCGATCGC............................................................................................................................................................................................................	20	0	2	0.50	1	0	0	0	0	0	1	0	0
........................GAGGCTTCGATCGCGTTC........................................................................................................................................................................................................	18	0	2	0.50	1	1	0	0	0	0	0	0	0
......................GGGAGGCTTCGATCGCGTTCTT......................................................................................................................................................................................................	22	0	2	0.50	1	0	0	0	0	0	0	1	0
..............................................AATGGTAAGGATACAAAGG.................................................................................................................................................................................	19	2	5	0.20	1	1	0	0	0	0	0	0	0
..............................................................................................................................................ATTTTGTGGGTGGTGCAT..................................................................................	18	2	20	0.15	3	2	0	0	0	0	1	0	0
............................................................................................................................................TGATTTTGTGGGTGGTGTATG.................................................................................	21	3	7	0.14	1	1	0	0	0	0	0	0	0
...........................................................................................................GGAAATTAAAAAAAGATGGGG..................................................................................................................	21	3	10	0.10	1	0	1	0	0	0	0	0	0
..........................................................................................................................................CTTGATTTTGTTGGTGGTG.....................................................................................	19	2	14	0.07	1	1	0	0	0	0	0	0	0
................................................................................................................................................................................................CGTAAAATCCCTGGCGGCG...............................	19	3	16	0.06	1	0	0	0	0	0	0	0	1
....................................................................................CAGAATTATTTAATAACGA...........................................................................................................................................	19	3	20	0.05	1	1	0	0	0	0	0	0	0
..............................................................................................................................................ATTTTGTTGATGGTGAAT..................................................................................	18	2	20	0.05	1	1	0	0	0	0	0	0	0

ACCGGCTCATGCGACGGTCATTCCCTCCGAAGCTAGCGCAAGAATTTTACCATTCTTATATTTCCCTTTTCGTTTTGTTAAACTCGCTTAATAAATTTTTGCTTCGTCTTTTAATTTTTGTCGACCCCGCCGGCTAATGTATTAAAACAACCACCACATAGCTATCAAATGGCGCGTAAATTTTAAAACGTCTAATTTTAGTGACCGCCGCCGCTGCCTGCTCGGTAACCCCTCAAATGACA ************************************************....................((((((.....((.((((((((((.....((..(((((((...........((((...))))...........)))))))....)).....)))))))...))).)).......))))))..************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902010 ovaries	M040 female body
.................................................................................................................................................................................AAATGTTAAAATGTCTAAT..............................................	19	2	10	0.10	1	1	0
....................................................................................................................................................AACCCCCACAGAGCTATCGAAT........................................................................	22	3	15	0.07	1	0	1

Species	Coordinate	ID	Alignment
dp5	XR_group3a:1341111-1341352 -	dps_2913	TGGCCGAGTACGCTGCCAGTAAGGGAGGCTTCGATCGCGTTCTTAAAATGGTAAGAAT-ATAAAG---------------------GGAAAAGCAAAACAATTTGAGCG-AATTATTTAAAAACGAAGCAG---AA---A-----------ATTAAAAACAGCTGGGGCGG----------------CCGA-------T-T---ACATAATTTTGTTGGT-GG---------------------TGTATCGATAGTTTACCGCGC-ATTTAAA----------------------------------------------------------------------------------------------------------------------------------ATTTTGCAGATTAAAATCACTGGCGGCGGCGACGGACGAGCCATTGGGGAGTTTACTGT
droPer2	scaffold_23:1374051-1374292 -		TGGCCGAGTACGCTGCCAGCAAGGGAGGCTTCGATCGCGTTCTTAAAATGGTGAGAAT-ATAAAG---------------------GAAAAAGCAAAACAATTTGAGCG-AATTATTTAAAAACGAAGCAG---AA---A-----------ATTAAAAACAGCTGGAGCGG----------------CCGA-------T-T---ACATAATTTTGTTGGT-GG---------------------TGTATCGATAGTTGACCGCGC-ATTTAAA----------------------------------------------------------------------------------------------------------------------------------ACTTTGCAGATTAAAATCACTGGCGGCGGCGACGGACGAGCCATTGGGGAGTTTACTGT
droWil2	scf2_1100000004729:2221427-2221516 +		TATTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATCACCGCTC-ATCTTA------------------------------------------------------------------------------------------------------A---------------------ATTTA--AAATTGCAGATAAAAATCACCAGCGGTGGGGATGGACGTTGTGTCGGTGAATTTACTGT
droVir3	scaffold_13049:5159180-5159408 -	dvi_18405	TTGCCGAATTTATATCGAAAGGGGCAAGTTTTGATCGAGTCACGCAAATGGTAAGTGG-ACGCCAAATATTCGCG-GAAAGCAAAG-------------------TGC----------AAAAGCGACGCAA------------------CA-----AAACAGCTGACATCA------------------------AG--TTTCGA------------------TATTATATAAGTTG------TGTTATCGATAAC---GCGCCGCATTTGAAC-TGTT-----------------------------------------------------------------------------------------------------------------------------TGTTGCAGGTGAAAATTACAAATGGCGGCGAAGGGCGCTGCGTCGGCGAATTTATTGT
droMoj3	scaffold_6680:3531649-3531879 -		TAGCCGAATTTATTTCCAAAGGCACCAGTTTTGATCGCGTTACTCAAATGGTAAGTGACAGCCGAAAAATTTGTG-TAAGGAAACG-------------------ACG----------GAAAACAACGCAC---TG---C-----------ACT--AATCAGCTGAAACTT------------------------TG--TTTCGATAAA-TTATGTAAGCAGG---------------------ACTATCGATAAA---GCGCTGCATT---------------------------------------------------------------------------------------------------------------------------------TGA--ATGTTGCAGGTTAAAATAACGAGTGGCGGCGAAGGGCGTTGCGTGGGCGAATTTACGGT
droGri2	scaffold_15110:9823715-9823938 +		TTGCCAAATTTATATCTAAAGGCCCAAATTTTGACCGCGTCACGCAAATGGTAAATGG-AGACGAAAAACTCGCA-TGAAGAACAG-------------------------------------CCAAGAAG---AA---C-----------GCAACAAACAGCTGAAGCTG------------------------AG--TTTCGA------------------TATTATATAAGCAAG------CCTATCGATAAC---GCGCCTCATTTGAAT---------------------------------------------------------------------------------------------------------------------------------TCTTTGCAGGTAAAAATAACAAGCGGCGGCGATGGTAGCGTTGTGGGTGAATTTACTGT
droAna3	scaffold_13337:9479840-9480106 -		TTGCCGAGCGTTGTCGCAATTACAATGGTTTCGACCGTGTTTTGAATATGGTAAAGTT-ATGTGA----------------------------------AGTTCATTA--------------ATG---------------ACAAG-----A-----AAGCGACTGGGA--A----------------T---CAGATGTTATTCGA------------------TATTAGATAATCG--------ACAGTCGATAAATGAGCGCGT-CTTTTAAATAGTTTATTTTCAGA-ACGGAACTTTTGAAGTCTCTAATTTT---------TCT-----------------------------------------AAACAA--------------T----T--TTAT--ATTTTTCAGATACAAATGGTGGATGGCGGTGATGGTCGTGCCGTGGGAGAGTTTACTGT
droBip1	scf7180000396544:291380-291661 -		TTTCTGATCATTGTCGCAATTCCAATGGTTTTGACCGCGTTTTAAGAATGGTAAAGCT-CCATGA-AAATCATTACAAAAGAAAAG-------------------ATA----------------A--------------------------ATGACAAGCGATTGGAA-------------------T---CAGCTGTTTTTCGA------------------TATTACATAACAA--------ATTGTCGATAAATGAGCGCGG-CTTTAAAATTGTTTTTTTGTTTAGATGGAATTTTTCACGTCTGTAAT--A-AA--TTATCCT-----------------------------------------AAAACG--------------T----T--GTAC--ATTTTTCAGATCAAAATGGTGGATGGTGGCAATGGTCGTGCTGTGGGAGAGTTTACTGT
droKik1	scf7180000302441:1114446-1114776 -		TGTCCCAGTACATCAGCGGCACGCAGAGCTTTGACCGGGTCGTGAAAATGGTACGATT-ACAAGA----------------------------------A---AATGCAA-CAAATT-GCAAGCGACGCACATGCA----------AAACA-----AAACAGCTGGCG--G----------------CTG-AGCCAG--TGAT-G------------------TGTTATGTAACAAGCC--CCAGTTATCGATAAGCGAGCGGGG-TATTGAAA-CTCTCATCTCTATG-AAGAGAG-------GATT-------------GATTTTTAAATATTTTC-T---CATTT----AATTTGTCTTAAAAAATAAGTAAATTCCCT--T-GACTAAATACAGTTAATTATTTTCAGATACAAATCACGGACGGCGGCGATGGTCGTGCTGTGGGAGAGTTCACTGT
droFic1	scf7180000454105:925373-925698 +		TATCCAAACACGCAAGCTCTTCCAAAGGATTTGACAGGGTCTTGAAAATGGTAAATAT-TTACAT---------------------AA-----------A---ATTGCAA-TC-----TAATGAGACGACGCCGAATTT-TTGCACCAAAA-----AAACAGCTGATT--C----------------C---CGGCAG--TGGTGG------------------CATTATATAACAGAAATA--AACTATCGATAAGT----TCTG-TTTTGA----------------------GTTTTAAAAAGACT-------------TTTTGTTAAACATCTTTATTGACATCTATTTATAATGCATGCATAAATGTCTAAACTAACTATTGGACT---TATAATGA--AATCCGCAGATCAAAATCACTGGTGGCGGCGATGGCCACGCCTTAGGAGAGTTCACTGT
droEle1	scf7180000491249:2794162-2794327 -		ATAT------------------------------------------------------------------------------------------------------------------AAAAACGAAGAAGAAAGAAAA-TCAA------------AA--AACTAAAGAAGCTTAAAACGAAACCTTACGA-------A-T---ATATATTTTTAATTTC-TG---------------------TTTAACCCTTAA---T-------------------------------------------------------------------------------------------------------------AACTAA--------------T----T--ATTA--ACTCTGCAGATTAAAATAACCGGCGGTGGTGATGGACGCGCCGTGGGAGAGTTCACTGT
droRho1	scf7180000758948:25066-25184 +		CAGCGGAATACGTCACCGGTACCAAGGGATTTGATCAAGTCTTGAGAATGGTAAGACT-ATGAAT----------------------------------AAT-AGTGCAA-CAAAT--TAAACAGACGCCGCCGAACTC-TCACA----AA-----AAACAGCTGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1	scf7180000302428:9372546-9372597 +		--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCAAAATCACTGGCGGAGGTGATGGCCGCGCCGTGGGAGAGTTCACTGT
droTak1	scf7180000415857:383542-383690 +		TGTCCGAGTACGCCAGCGGGCACAACGGATTCGACAGGGTCTTGAGAATGGTGAGATT-ATAAAC----------------------------------AATAAATGCAA-CAAATT-------GAAGA------------------AGAA-----AAACAGCTGACTCTG----------------C---CGCCAG--TGATGG------------------TATTATATAACATGGCTGCTTACTATCGATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1	scf7180000409466:325679-325971 +		TATGCGAGTACGCTAGTGGTACCAATGGATTTGATAGGGTCCTGAGAATGGTAAGATT-ATGAAC----------------------------------AAAAAGTGCAA-C--------AAACGACGCCGATGAGGTC-TCTCAAAAAAA-----GAACAGCTGGCT--G----------------T---CGGCAG--TGATGG------------------CATTATATAATCGAGGTGGTTATTATCGATAAGT----TCGG-TTTTAAAA-TGCCCATCTCAGTC-AAGAGATCTAAATAAGTTTTAAAATT----------------------------------------------------ATAATGA-------------CT----TCAATTG--AATTCTCAGATTAAAATCACAGGAGGTGGCGATGGCCGTGCATTGGGAGAGTTTACTGT
dm3	chr3L:2599452-2599737 +		TGTCCGAGTACGCCAGCGGGTCCAATGGATTCGACCGCGTCTTGAAAATGGTAAGATT-CTAAAC----------------------------------AATTTGTGCA-GCCGATTTTAAAGCGACGCCGTCGAAGTC-TCTCA-----A-----AAACAGCTGACT--G----------------T---CATCAG--TGATGG------------------TATTACATAATTCAGCTCGCTGCAATCGATAACCG-----------TGAAG-TGCTCACCTCTCTC-GTGGGATCTTCAGAGATTCAAAAATG----------------------------------------------------TAAACAA---------------------ATTTC--AATTCGCAGATTAAAATTACAGGCGGTGGAGATGGTCGCGCAATAGGGGAGTTCACTGT
droSim2	3l:2486597-2486882 +	dsi_3087	TGTCCGAGTACGCCAGCGGGTCCAATGGATTCGACCGCGTCCTGAGAATGGTAAGATT-ATAAAC----------------------------------AATTTGTGTA-GCCGACTTTAAACCGACGCCGTCGAAGTC-TCACA-----A-----GAACAGCTGACT--G----------------T---CATCAG--TGATGG------------------TATTACATAACTCAGCTCGCTGCAATCGATAACTG-----------TGGAG-TGCTCATCTCTCTC-GTGGGATCTGCAGAGATTCAAAAATG----------------------------------------------------TAAACAA---------------------ATTTT--AATTCGCAGATTAAAATCACAGGCGGTGGAGATGGTCGCGCAATAGGGGAGTTCACTGT
droSec2	scaffold_824:697-983 +		TGTCCGAGTACGCCAGCGGGTCCAATGGATTCGACCGCGTCCTGAGAATGGTAAGATT-ATAAAC----------------------------------AATTTGTGCCAGCCGATTTTAAAGCGACGCCGTCGAAGTC-TCACA-----A-----GAACAGCTGACT--G----------------T---CATCAG--TGATGG------------------TATTACATAACTCAGCTCGCTGCAATCGATAACTG-----------TGAAG-TGCTCATCTCTCTC-GTGGGATCTGCAGAGATTCAAAAATG----------------------------------------------------TAAACAA---------------------ATTTC--AATTCGCAGATTAAAATCACAGGCGGTGGAGATGGTCGCGCAATAGGGGAGTTCACTGT
droYak3	3L:9339460-9339764 -		TGTCCGAGTACGCCAGCGGGTCCAATGGATTTGACCGGGTTTTGCGTATGGTGAGATT-ATAAAC----------------------------------AAAAAGTGCA-GGCGAATTTAAATAGACGCCGTCAAAGTC-TCACA-----T---GCAAACAGCTGACT--G----------------T---CATCAG--TGATGG------------------TATTACATAACTCGGCTCGCTACAATCGATAAGT----GCGA-CTTTGAAG-TGCCCATCTCTCTC-GTGGGAACTACA--ATTTCAAAAATTTGACTTTCCGCC--------------------------------T-------TAAATTA---------------------AATTG--AATTCACAGATTAAAATCACAGGCGGTGGTGATGGTCGCGCAATAGGAGAGTTCACTGT
droEre2	scaffold_4784:2615843-2616149 +		TGTCCGAGTACGCCAGCGGGTCCAATGGATTTGACCGGGTTTTGAGAATGGTAAGATT-ATAAAC----------------------------------AAAAAGTGCA-GCCGATTTTAAAGCGACGCCGTCGAAGTC-TCACA-----A---GCAAACAGCTGACT--G----------------T---CGTCAG--TGATGG------------------TATTACATAACTTGGCTCGCTACAATCGATAAGT----GCGA-CTTTGAAG-TGCTCATCTCTCTC-GTTGTATCTACAGAGATTCCAAAATT-GACTTTCTGCT-----------------------------------------AAAAAG--------------T----TCAATGA--AATTCGCAGATTAAAATCACAGGCGGTGGTGATGGTCGCGCTATAGGGGAGTTTACTGT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

dp5

TGGCCGAGTACGCTGCCAGTAAGGGAGGCTTCGATCGCGTTCTTAAAATGGTAAGAAT-ATAAAG---------------------GGAAAAGCAAAACAATTTGAGCG-AATTATTTAAAAACGAAGCAG---AA---A-----------ATTAAAAACAGCTGGGGCGG----------------CCGA-------T-T---ACATAATTTTGTTGGT-GG---------------------TGTATCGATAGTTTACCGCGC-ATTTAAA----------------------------------------------------------------------------------------------------------------------------------ATTTTGCAGATTAAAATCACTGGCGGCGGCGACGGACGAGCCATTGGGGAGTTTACTGT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCGACGGACGAGCCATT..............	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......GTACGCTGCCAGTAAGGGAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................AATCACTGGCGGCGGCGACGGACGAGCC.................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATCACTGGCGGCGGCGACGGACG.....................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGGGAGTTTACTGT	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................GATTAAAATCACTGGCGGCGGC.............................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......GTACGCTGCCAGTAAGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.....................AGGGAGGCTTCGATCGCGTTCTTAA................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................GAGGCTTCGATCGCGTTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................GTAAGGGAGGCTTCGATCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0
........................GAGGCTTCGATCGCGTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................GGGAGGCTTCGATCGCGTTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	1	0	0	0	0	0	0	0	0	0

droPer2

TGGCCGAGTACGCTGCCAGCAAGGGAGGCTTCGATCGCGTTCTTAAAATGGTGAGAAT-ATAAAG---------------------GAAAAAGCAAAACAATTTGAGCG-AATTATTTAAAAACGAAGCAG---AA---A-----------ATTAAAAACAGCTGGAGCGG----------------CCGA-------T-T---ACATAATTTTGTTGGT-GG---------------------TGTATCGATAGTTGACCGCGC-ATTTAAA----------------------------------------------------------------------------------------------------------------------------------ACTTTGCAGATTAAAATCACTGGCGGCGGCGACGGACGAGCCATTGGGGAGTTTACTGT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.............................................AAATGGTGAGAAT-ATAAAG---------------------GAA.....................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACGAGCCATTGGGGAGTT......	21	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................GATTAAAATCACTGGCGGCG...............................	20	2	0.50	1	0	1	0	0	0	0

droWil2

TATTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATCACCGCTC-ATCTTA------------------------------------------------------------------------------------------------------A---------------------ATTTA--AAATTGCAGATAAAAATCACCAGCGGTGGGGATGGACGTTGTGTCGGTGAATTTACTGT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCGGTGGGGATGGACG.....................	21	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCAGCGGTGGGGATGGAC......................	21	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGGGATGGACGTTGTGTCGGT...........	24	1	1.00	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGTCGGTGAATTTAC...	18	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTGGGGATGGACGTTGTGTC..............	24	1	1.00	1	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................AATCACCAGCGGTGGGGATGGAC......................	23	1	1.00	1	0	0	1	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGGGATGGACGTTGTGTC..............	22	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGATGGACGTTGTGTC..............	18	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCGGTGGGGATGGA.......................	19	1	1.00	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGACGTTGTGTCGGTGAATT......	23	1	1.00	1	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCGGTGGGGATGGACGTTGT.................	25	1	1.00	1	0	1	0	0	0

droVir3

TTGCCGAATTTATATCGAAAGGGGCAAGTTTTGATCGAGTCACGCAAATGGTAAGTGG-ACGCCAAATATTCGCG-GAAAGCAAAG-------------------TGC----------AAAAGCGACGCAA------------------CA-----AAACAGCTGACATCA------------------------AG--TTTCGA------------------TATTATATAAGTTG------TGTTATCGATAAC---GCGCCGCATTTGAAC-TGTT-----------------------------------------------------------------------------------------------------------------------------TGTTGCAGGTGAAAATTACAAATGGCGGCGAAGGGCGCTGCGTCGGCGAATTTATTGT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACAAATGGCGGCGAAG.........................	19	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATTACAAATGGCGGCGAAG.........................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................GGGGCAAGTTTTGATCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................GATCGAGTCACGCAAATGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................AGTTTTGATCGAGTCACGCA................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................TGATCGAGTCACGCAAATGGTAT........................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TAGCCGAATTTATTTCCAAAGGCACCAGTTTTGATCGCGTTACTCAAATGGTAAGTGACAGCCGAAAAATTTGTG-TAAGGAAACG-------------------ACG----------GAAAACAACGCAC---TG---C-----------ACT--AATCAGCTGAAACTT------------------------TG--TTTCGATAAA-TTATGTAAGCAGG---------------------ACTATCGATAAA---GCGCTGCATT---------------------------------------------------------------------------------------------------------------------------------TGA--ATGTTGCAGGTTAAAATAACGAGTGGCGGCGAAGGGCGTTGCGTGGGCGAATTTACGGT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...................AGGCACCAGTTTTGATCGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0

droGri2

TTGCCAAATTTATATCTAAAGGCCCAAATTTTGACCGCGTCACGCAAATGGTAAATGG-AGACGAAAAACTCGCA-TGAAGAACAG-------------------------------------CCAAGAAG---AA---C-----------GCAACAAACAGCTGAAGCTG------------------------AG--TTTCGA------------------TATTATATAAGCAAG------CCTATCGATAAC---GCGCCTCATTTGAAT---------------------------------------------------------------------------------------------------------------------------------TCTTTGCAGGTAAAAATAACAAGCGGCGGCGATGGTAGCGTTGTGGGTGAATTTACTGT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droAna3

TTGCCGAGCGTTGTCGCAATTACAATGGTTTCGACCGTGTTTTGAATATGGTAAAGTT-ATGTGA----------------------------------AGTTCATTA--------------ATG---------------ACAAG-----A-----AAGCGACTGGGA--A----------------T---CAGATGTTATTCGA------------------TATTAGATAATCG--------ACAGTCGATAAATGAGCGCGT-CTTTTAAATAGTTTATTTTCAGA-ACGGAACTTTTGAAGTCTCTAATTTT---------TCT-----------------------------------------AAACAA--------------T----T--TTAT--ATTTTTCAGATACAAATGGTGGATGGCGGTGATGGTCGTGCCGTGGGAGAGTTTACTGT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGTGCCGTGGGAGAGT.......	22	1	20.00	20	1	0	0	0	19	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGTGCCGTGGGAG..........	19	1	5.00	5	1	0	0	0	4	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................GATACAAATGGTGGATGGCGGT.............................	22	1	3.00	3	2	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGTGCCGTGGGA...........	18	1	3.00	3	0	0	0	0	3	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGGTCGTGCCGTGGGAGAGT.......	25	1	3.00	3	0	0	0	0	3	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGTGCCGTGGGAGA.........	20	1	2.00	2	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGTGCCGTGGGAGAGTTTACT..	27	1	2.00	2	0	0	0	0	2	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGTGGGAGAGTTTACT..	20	1	2.00	2	0	0	0	0	2	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGGTGATGGTCGTGCCGT...............	23	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................ACAAATGGTGGATGGCGGT.............................	19	1	1.00	1	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGGATGGCGGTGATG.........................	19	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCGGTGATGGTCGTGCCGTGGGA...........	27	1	1.00	1	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................ACAAATGGTGGATGGCGGTGAT..........................	22	1	1.00	1	0	0	0	0	1	0
.................AATTACAATGGTTTCGACCGTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
.................AATTACAATGGTTTCGACCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGCGGTGATGGTCGTGCC.................	25	1	1.00	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGCGGTGATGGTCG.....................	21	1	1.00	1	1	0	0	0	0	0
..GCCGAGCGTTGTCGCAATTACAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGTGATGGTCGTGCCGTGGGA...........	24	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAATGGTGGATGGCGGT.............................	21	1	1.00	1	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGGTGGATGGCGGT.............................	18	1	1.00	1	1	0	0	0	0	0
TTGCCGAGCGTTGTCGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGTGGGAGAGTTTACT..	18	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGTCGTGCCGTGGGAGA.........	21	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGTGCCGTGGGAGAGTT......	23	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGATGGCGGTGATGGTCGTGC..................	23	1	1.00	1	1	0	0	0	0	0
TTGCCGAGCGTTGTCGCAATTACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
..GCCGAGCGTTGTCGCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0

droBip1

TTTCTGATCATTGTCGCAATTCCAATGGTTTTGACCGCGTTTTAAGAATGGTAAAGCT-CCATGA-AAATCATTACAAAAGAAAAG-------------------ATA----------------A--------------------------ATGACAAGCGATTGGAA-------------------T---CAGCTGTTTTTCGA------------------TATTACATAACAA--------ATTGTCGATAAATGAGCGCGG-CTTTAAAATTGTTTTTTTGTTTAGATGGAATTTTTCACGTCTGTAAT--A-AA--TTATCCT-----------------------------------------AAAACG--------------T----T--GTAC--ATTTTTCAGATCAAAATGGTGGATGGTGGCAATGGTCGTGCTGTGGGAGAGTTTACTGT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TGTCCCAGTACATCAGCGGCACGCAGAGCTTTGACCGGGTCGTGAAAATGGTACGATT-ACAAGA----------------------------------A---AATGCAA-CAAATT-GCAAGCGACGCACATGCA----------AAACA-----AAACAGCTGGCG--G----------------CTG-AGCCAG--TGAT-G------------------TGTTATGTAACAAGCC--CCAGTTATCGATAAGCGAGCGGGG-TATTGAAA-CTCTCATCTCTATG-AAGAGAG-------GATT-------------GATTTTTAAATATTTTC-T---CATTT----AATTTGTCTTAAAAAATAAGTAAATTCCCT--T-GACTAAATACAGTTAATTATTTTCAGATACAAATCACGGACGGCGGCGATGGTCGTGCTGTGGGAGAGTTCACTGT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TATCCAAACACGCAAGCTCTTCCAAAGGATTTGACAGGGTCTTGAAAATGGTAAATAT-TTACAT---------------------AA-----------A---ATTGCAA-TC-----TAATGAGACGACGCCGAATTT-TTGCACCAAAA-----AAACAGCTGATT--C----------------C---CGGCAG--TGGTGG------------------CATTATATAACAGAAATA--AACTATCGATAAGT----TCTG-TTTTGA----------------------GTTTTAAAAAGACT-------------TTTTGTTAAACATCTTTATTGACATCTATTTATAATGCATGCATAAATGTCTAAACTAACTATTGGACT---TATAATGA--AATCCGCAGATCAAAATCACTGGTGGCGGCGATGGCCACGCCTTAGGAGAGTTCACTGT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ATAT------------------------------------------------------------------------------------------------------------------AAAAACGAAGAAGAAAGAAAA-TCAA------------AA--AACTAAAGAAGCTTAAAACGAAACCTTACGA-------A-T---ATATATTTTTAATTTC-TG---------------------TTTAACCCTTAA---T-------------------------------------------------------------------------------------------------------------AACTAA--------------T----T--ATTA--ACTCTGCAGATTAAAATAACCGGCGGTGGTGATGGACGCGCCGTGGGAGAGTTCACTGT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CAGCGGAATACGTCACCGGTACCAAGGGATTTGATCAAGTCTTGAGAATGGTAAGACT-ATGAAT----------------------------------AAT-AGTGCAA-CAAAT--TAAACAGACGCCGCCGAACTC-TCACA----AA-----AAACAGCTGAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATCAAAATCACTGGCGGAGGTGATGGCCGCGCCGTGGGAGAGTTCACTGT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TGTCCGAGTACGCCAGCGGGCACAACGGATTCGACAGGGTCTTGAGAATGGTGAGATT-ATAAAC----------------------------------AATAAATGCAA-CAAATT-------GAAGA------------------AGAA-----AAACAGCTGACTCTG----------------C---CGCCAG--TGATGG------------------TATTATATAACATGGCTGCTTACTATCGATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TATGCGAGTACGCTAGTGGTACCAATGGATTTGATAGGGTCCTGAGAATGGTAAGATT-ATGAAC----------------------------------AAAAAGTGCAA-C--------AAACGACGCCGATGAGGTC-TCTCAAAAAAA-----GAACAGCTGGCT--G----------------T---CGGCAG--TGATGG------------------CATTATATAATCGAGGTGGTTATTATCGATAAGT----TCGG-TTTTAAAA-TGCCCATCTCAGTC-AAGAGATCTAAATAAGTTTTAAAATT----------------------------------------------------ATAATGA-------------CT----TCAATTG--AATTCTCAGATTAAAATCACAGGAGGTGGCGATGGCCGTGCATTGGGAGAGTTTACTGT	Size	Hit Count	Total Norm	Total
No Reads

dm3

TGTCCGAGTACGCCAGCGGGTCCAATGGATTCGACCGCGTCTTGAAAATGGTAAGATT-CTAAAC----------------------------------AATTTGTGCA-GCCGATTTTAAAGCGACGCCGTCGAAGTC-TCTCA-----A-----AAACAGCTGACT--G----------------T---CATCAG--TGATGG------------------TATTACATAATTCAGCTCGCTGCAATCGATAACCG-----------TGAAG-TGCTCACCTCTCTC-GTGGGATCTTCAGAGATTCAAAAATG----------------------------------------------------TAAACAA---------------------ATTTC--AATTCGCAGATTAAAATTACAGGCGGTGGAGATGGTCGCGCAATAGGGGAGTTCACTGT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................CCAATGGATTCGACCGCGTCTTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CGCCAGCGGGTCCAATGGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCGGTGGAGATGGTC......................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0
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.............................................................AAAC----------------------------------AATTTGTGCA-GCCGATT.........................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAGGCGGTGGAGATG.........................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
........................ATGGATTCGACCGCGTCTTGAAAATGA...........................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................CAATGGATTCGACCGCGTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..TCCGAGTACGCCAGCGGGTCCAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................GATTTTAAAGCGACGCCGTCG........................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGGGAGTTCAC...	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGGG..........	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................TTCGACCGCGTCTTGAAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATGGTCGCGCAATAGGGGAGT.......	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

TGTCCGAGTACGCCAGCGGGTCCAATGGATTCGACCGCGTCCTGAGAATGGTAAGATT-ATAAAC----------------------------------AATTTGTGTA-GCCGACTTTAAACCGACGCCGTCGAAGTC-TCACA-----A-----GAACAGCTGACT--G----------------T---CATCAG--TGATGG------------------TATTACATAACTCAGCTCGCTGCAATCGATAACTG-----------TGGAG-TGCTCATCTCTCTC-GTGGGATCTGCAGAGATTCAAAAATG----------------------------------------------------TAAACAA---------------------ATTTT--AATTCGCAGATTAAAATCACAGGCGGTGGAGATGGTCGCGCAATAGGGGAGTTCACTGT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.....................CCAATGGATTCGACCGCGTCCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
............................ATTCGACCGCGTCCTGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATAGGGGAGTTCACTGT	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
................CGGGTCCAATGGATTCGACCGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............CAGCGGGTCCAATGGATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................GATTAAAATCACAGGCGGT................................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................TGTGTA-GCCGACTTTAAACCG.................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................ATCAG--TGATGG------------------TATTACA........................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................AATCGATAACTG-----------TGGAG-TGCT.......................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGGGGAGTTCACTGG	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................ATTCGACCGCGTCCTGAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................CCAATGGATTCGACCGCGTCCTGAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................TCACA-----A-----GAACAGCTGACT--G----------------T---C..............................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............CAGCGGGTCCAATGGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGTCGCGCAATAGGGGAG........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGATGGTCGCGCAATAGGGGA.........	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAATCACAGGCGGTGGAGATGGT.......................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................GATTAAAATCACAGGCGGTGGAGATGGTC......................	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........CGCCAGCGGGTCCAATGGATTCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................CGACCGCGTCCTGAGAATG............................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GGTCCAATGGATTCGACCGCGTCCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...CCGAGTACGCCAGCGGGTCCAATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGATGGTCGCGCAATAGGGGAG........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0

droSec2

TGTCCGAGTACGCCAGCGGGTCCAATGGATTCGACCGCGTCCTGAGAATGGTAAGATT-ATAAAC----------------------------------AATTTGTGCCAGCCGATTTTAAAGCGACGCCGTCGAAGTC-TCACA-----A-----GAACAGCTGACT--G----------------T---CATCAG--TGATGG------------------TATTACATAACTCAGCTCGCTGCAATCGATAACTG-----------TGAAG-TGCTCATCTCTCTC-GTGGGATCTGCAGAGATTCAAAAATG----------------------------------------------------TAAACAA---------------------ATTTC--AATTCGCAGATTAAAATCACAGGCGGTGGAGATGGTCGCGCAATAGGGGAGTTCACTGT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.....................CCAATGGATTCGACCGCGTCCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................	24	2	1.00	2	1	1	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATGGTCGCGCAATAGGGGAGTT......	25	2	1.00	2	1	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGCGGTGGAGATGGTCGCGC..................	24	2	1.00	2	0	2	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCGGTGGAGATGGTCG.....................	20	2	1.00	2	0	2	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAGGCGGTGGAGATGGTC......................	22	2	1.00	2	0	2	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGGGGAGTTCACTGT	18	2	0.50	1	0	1	0	0
...............................CGACCGCGTCCTGAGAATG............................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCAATAGGGGAGTTCACT..	21	2	0.50	1	0	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGATGGTCGCGCAATAGGGGA.........	24	2	0.50	1	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGCGGTGGAGATGGTCG.....................	21	2	0.50	1	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGGGAGTTCACT..	27	2	0.50	1	0	0	0	1
............CCAGCGGGTCCAATGGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	1	0	0	0
.........ACGCCAGCGGGTCCAATGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	1
.......................AATGGATTCGACCGCGTCCTGAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0
...................GTCCAATGGATTCGACCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	1	0
.............................................................................................................................................................................................................................................................................................TCTC-GTGGGATCTGCAGAGATT..........................................................................................................................................................	22	2	0.50	1	1	0	0	0
...............................................ATGGTAAGATT-ATAAAC----------------------------------AATT.......................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	1
.GTCCGAGTACGCCAGCGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGG...........	18	2	0.50	1	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGGGAGTT......	23	2	0.50	1	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................AATCACAGGCGGTGGAGATGGT.......................	22	2	0.50	1	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGGCGGTGGAGATGGTC......................	21	2	0.50	1	0	1	0	0
.....GAGTACGCCAGCGGGTCCAATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................GATTAAAATCACAGGCGGTGGAGATGGT.......................	28	2	0.50	1	0	1	0	0
........................ATGGATTCGACCGCGTCCTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0
.......GTACGCCAGCGGGTCCAATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................AATCACAGGCGGTGGAGATGGTCGCGC..................	27	2	0.50	1	0	1	0	0
.....................CCAATGGATTCGACCGCGTCCTGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0
.................................................................................................................GATTTTAAAGCGACGCCGTCG........................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCAATAGGGGAGTTCACT..	20	2	0.50	1	0	1	0	0
...CCGAGTACGCCAGCGGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	2	0.50	1	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAATCACAGGCGGTGGAGA...........................	22	2	0.50	1	0	1	0	0
............................ATTCGACCGCGTCCTGAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	1

droYak3

TGTCCGAGTACGCCAGCGGGTCCAATGGATTTGACCGGGTTTTGCGTATGGTGAGATT-ATAAAC----------------------------------AAAAAGTGCA-GGCGAATTTAAATAGACGCCGTCAAAGTC-TCACA-----T---GCAAACAGCTGACT--G----------------T---CATCAG--TGATGG------------------TATTACATAACTCGGCTCGCTACAATCGATAAGT----GCGA-CTTTGAAG-TGCCCATCTCTCTC-GTGGGAACTACA--ATTTCAAAAATTTGACTTTCCGCC--------------------------------T-------TAAATTA---------------------AATTG--AATTCACAGATTAAAATCACAGGCGGTGGTGATGGTCGCGCAATAGGAGAGTTCACTGT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGAGAGTT......	23	1	10.00	10	1	0	0	0	0	0	9	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGTCGCGCAATAGGAGAGTT......	25	1	5.00	5	0	0	0	0	0	0	5	0	0	0	0
......................CAATGGATTTGACCGGGTTTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	4.00	4	0	1	0	0	0	0	3	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGAGAGTTC.....	24	1	4.00	4	0	1	0	0	0	0	3	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGCGGTGGTGATGGT.......................	19	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0
.....................CCAATGGATTTGACCGGGTTTTGCGT...............................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	1	0	0	0	0	2	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAATCACAGGCGGTGGT.............................	21	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGAGAGT.......	22	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGCGGTGGTGATGGTC......................	20	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGAGAGTTCACT..	27	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGCGCAATAGGAGAGTT......	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
................................................................................................................................................................................................................................ATTACATAACTCGGCTCGCTACA.......................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTCGCGCAATAGGAGA.........	19	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
...................GTCCAATGGATTTGACCGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
...............................................................................................................................GCCGTCAAAGTC-TCACA-----T---GCAAACAGC...........................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................C-TCACA-----T---GCAAACAGCTGACT--G----------------T---C..............................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
......................CAATGGATTTGACCGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGAGAGTG......	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGTCGCGCAATAGGAGA.........	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................GGTCCAATGGATTTGACCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................GATTAAAATCACAGGCGGT................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCGGTGGTGATGGTCGCGCAATA..............	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGGTCGCGCAATAGGAGAGTTC.....	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGTCGCGCAATAGGAGAGTTCA....	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGAGA.........	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
TGTCCGAGTACGCCAGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
TGTCCGAGTACGCCAGCGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGTCGCGCAATAGGAGAGTTCACT..	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGAGAGTTCA....	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..TCCGAGTACGCCAGCGGGTCCAATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCAATAGGAGAGTTCAC...	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................AGCTGACT--G----------------T---CATCAG--TGATGG------------------T..............................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................CGGGTTTTGCGTATGGTGA........................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAATCACAGGCGGTGG..............................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCAATAGGAGAGTTCAC...	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTCGCGCAATAGGAGAGTTCAC...	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGGTCGCGCAATAGG............	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................TC-TCACA-----T---GCAAACAGCTGACT--G----------------T---C..............................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....GAGTACGCCAGCGGGTCCAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....CGAGTACGCCAGCGGGTCCAATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................GTCCAATGGATTTGACCGGGTTTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................AATGGATTTGACCGGGTTTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................CCAATGGATTTGACCGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCGGTGGTGATGGTCGCGCA.................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................CCAATGGATTTGACCGGGTTTTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...CCGAGTACGCCAGCGGGTCCAATGGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...CCGAGTACGCCAGCGGGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGTCGCGCAATAGGAG..........	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGGTCGCGCAATAGGAGAGTT......	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................................................................GCTACAATCGATAAGT----GCGA-CTTTGAAG-T..........................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTCGCGCAATAGGAGAGTT......	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEre2

TGTCCGAGTACGCCAGCGGGTCCAATGGATTTGACCGGGTTTTGAGAATGGTAAGATT-ATAAAC----------------------------------AAAAAGTGCA-GCCGATTTTAAAGCGACGCCGTCGAAGTC-TCACA-----A---GCAAACAGCTGACT--G----------------T---CGTCAG--TGATGG------------------TATTACATAACTTGGCTCGCTACAATCGATAAGT----GCGA-CTTTGAAG-TGCTCATCTCTCTC-GTTGTATCTACAGAGATTCCAAAATT-GACTTTCTGCT-----------------------------------------AAAAAG--------------T----TCAATGA--AATTCGCAGATTAAAATCACAGGCGGTGGTGATGGTCGCGCTATAGGGGAGTTTACTGT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGGTCGCGCTATAGGG...........	21	1	3.00	3	1	0	0	0	1	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCTATAGGGGA.........	20	1	2.00	2	0	0	0	0	1	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGCTATAGGGGAGTTTACT..	21	1	2.00	2	0	0	0	0	2	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCGCTATAGGGGAGTTTACT..	23	1	2.00	2	1	0	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCTATAGGGG..........	19	1	2.00	2	0	0	0	0	0	2	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGCGGTGGTGATGGTC......................	20	1	2.00	2	0	0	0	0	0	2	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGCGGTGGTGATGGT.......................	19	1	2.00	2	0	0	0	0	1	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTCGCGCTATAGGGGAGTTTACT..	26	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................GATTAAAATCACAGGCGGTGGTGATG.........................	26	1	1.00	1	0	0	0	0	0	1	0
....CGAGTACGCCAGCGGGTCCAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTCGCGCTATAGGGGA.........	18	1	1.00	1	1	0	0	0	0	0	0
..............AGCGGGTCCAATGGATTTGACCGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAATCACAGGCGGTGGT.............................	21	1	1.00	1	0	0	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGTGGTGATGGTCGCGCT.................	21	1	1.00	1	0	0	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGCTATAGGGGAGTTTACT..	20	1	1.00	1	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTCGCGCTATAGGG...........	18	1	1.00	1	0	0	0	0	0	1	0
............................ATTTGACCGGGTTTTGAGAATG............................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTCGCGCTATAGGGGA.........	19	1	1.00	1	0	0	0	0	0	1	0
..............................TTGACCGGGTTTTGAGAATG............................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATGGTCGCGCTATAGGGGA.........	22	1	1.00	1	0	0	0	0	0	1	0
...................GTCCAATGGATTTGACCGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGATGGTCGCGCTATAGGGGA.........	23	1	1.00	1	0	0	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAATCACAGGCGGTG...............................	19	1	1.00	1	0	0	0	0	0	1	0
........................ATGGATTTGACCGGGTTTTGAGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
.............................TTTGACCGGGTTTTGAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
.....GAGTACGCCAGCGGGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
...................GTCCAATGGATTTGACCGGGTTTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0
.............CAGCGGGTCCAATGGATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
.....................CCAATGGATTTGACCGGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTCGCGCTATAGGGGAGTTTAC...	24	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................GACT--G----------------T---CGTCAG--TGATGG------------------T..............................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
......AGTACGCCAGCGGGTCCAATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
........................................TTTGAGAATGGTAAGATT-...................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
..............................................AATGGTAAGATT-ATAAAC----------------------------------AAAA.......................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
...........................GATTTGACCGGGTTTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0

dps_2913

XR_group3a:1341161-1341302 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads