ID:

dps_2875

Coordinate:

XL_group3b:9548-9698 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.9 -6.7 -6.5 -6.2

Flybase annnotation

CDS [Dpse\GA27920-cds]; exon [dpse_GLEANR_7128:2]; intron [Dpse\GA27920-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGCTATTCCTATGTTACTTTCATTAACTCCGAGGCAGTCCTGCCTCGATAGCCGTGAACGCGAAAGTTCCCAAAACTTAATTTATTTTGCTGGTTGAAAATGAAAAAAAAGGTTTATAATAGTAACAACAAAAACAAAAAAATTAGAAAAAAATACCCCAAACCTTTCAAATATCCCCCCCTTTTTTATCTGTTTCCACAGCTTCAAAACGAAAGGCGCCTTTCAGCGAGGGACCACTGTACTGAAGCTGT
******************************************************..(((.....................((((((((........)))))))).......)))*****************************************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total M040
female body
SRR902010
ovaries
SRR902011
testis
V112
male body
GSM343916
embryo
M059
embryo
M062
head
GSM444067
head
..........................................................................................TGGTTGAAAATGAAAAAAAAGGTT......................................................................................................................................... 24 0 1 7.00 7 5 2 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCAGCGAGGGACCACTGTACT........ 21 0 1 6.00 6 6 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCAGCGAGGGACCACTGTAC......... 20 0 1 6.00 6 6 0 0 0 0 0 0 0
..........................................................................................TGGTTGAAAATGAAAAAAAAGGT.......................................................................................................................................... 23 0 1 5.00 5 1 4 0 0 0 0 0 0
.........................................................................................CTGGTTGAAAATGAAAAAAAAGGT.......................................................................................................................................... 24 0 1 4.00 4 2 2 0 0 0 0 0 0
....................................................................................................................TAATAGCAACAACAAAAACAAAAAAA............................................................................................................. 26 1 1 4.00 4 0 0 4 0 0 0 0 0
........................................TGCCTCGATAGCCGTGAACGCGAAAG......................................................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0
.........................................................................................CTGGTTGAAAATGAAAAAAAGGTT.......................................................................................................................................... 24 2 1 3.00 3 0 3 0 0 0 0 0 0
...........TGTTACTTTCATTAACTCCGAGG......................................................................................................................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0 0 0 0
.............................................................................................................................................................................................CTGTTTCCACAGCTTCAAAACGA....................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................................................CTGGTTGAAAATGAAAAAAAAGG........................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CAGCGAGGGACCACTGTACTGAAGT... 25 1 1 2.00 2 2 0 0 0 0 0 0 0
......................TTAACTCTGAGGCAGTCCTACC............................................................................................................................................................................................................... 22 2 1 2.00 2 2 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCAGCGAGGGACCACTGTACTGAAG.... 25 0 1 2.00 2 2 0 0 0 0 0 0 0
........................................TGCCTCGATAGCCGTGAACGCGAAAGT........................................................................................................................................................................................ 27 0 1 2.00 2 1 0 0 1 0 0 0 0
.......................................................................................TGCTGGTTGAAAATGAAAAAAAAG............................................................................................................................................ 24 0 1 2.00 2 0 2 0 0 0 0 0 0
.........................................................................................CTGGTTGAAAATGAAAAAAAGGTTTA........................................................................................................................................ 26 3 1 2.00 2 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................TCAGCGAGGGACCACTGTACTGAAGC... 26 0 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................TGGTTGAAAATGAAAAAAAGGTTT......................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................TGGTTGAAAATGAAAAAAAGGTT.......................................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................CACAGCTTCAAAACGAAAGGCGCCT.............................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................TGAACGCGAAAGTTCCCAAAACT.............................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................CTGGTTGAAAATGAAAAAAAAGGTT......................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................TCCACAGCTTCAAAACGAAAGGCGTCTT............................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CGAGGGACCACTGTACT........ 17 0 1 1.00 1 0 1 0 0 0 0 0 0
.......................................................................................TGCTGGTTGAAAATGAAAAAAAAGGTT......................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
..............TACTTTCATTAACTCCGAGGCAGTCC................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
.........TATGTTACTTTCATTAACTCCGAG.......................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................CTGGTTGAAAATGAAAAAAAAGGTTT........................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0
........................................TGCCTCGATAGCCGTGAACGC.............................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................ATAGCCGTGAACGCGAAAGTTCC..................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................CTGGTTGAAAATGAAAAAAAGGT........................................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0 0 0
......TCCTATGTTACTTTCATTAACT............................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................TGGTTGAAAATGAAAAAAAGG............................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................TGCCTCGATAGCCGTGAACGCGAAA.......................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................ATAGCCGTGAACGCGAAAGTTCCC.................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CAGCGAGGGACCACTGTACTGAAGC... 25 0 1 1.00 1 0 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................TCCTTTCAGCGAGGGACCACTGTAC......... 25 1 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................TGGTTGAAAATGAAAAAAAAGG........................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................TGCTGGTTGAAAATGAAAAAAAG............................................................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................TCCACAGCTTCAAAACGAAAGGCGCCTT............................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0
...............ACTTTCATTAACTCCGAGGCAGTCC................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CCTTTCAGCGAGGGACCACTGTACTA....... 26 1 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CAGCGAGGGACCACTGTACT........ 20 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................CACAGCTTCAAAACGAAAGGCGCCTT............................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0
......TCCTATGTTACTTTCATTAACTCCGAC.......................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................TAATTTATTTTGCTGGGTGAAAA....................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0 0
.......................................................................................TGCTGGTTGAAAATGAAAAAAG.............................................................................................................................................. 22 1 2 0.50 1 0 1 0 0 0 0 0 0
.....TTCCTATGTGACTTTCATTACC................................................................................................................................................................................................................................ 22 2 4 0.25 1 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................TCAGCGAGGGACCACTGTA.......... 19 0 20 0.15 3 3 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GGCGCCTTTCAGCGAGGGAC................. 20 0 20 0.10 2 1 0 0 0 0 0 0 1
...............................................................................................................................................................................................................AACGAAAGGCGCCTTTCAGCGAGG.................... 24 0 12 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCAGCGAGGGACCACTGTAAT........ 21 1 14 0.07 1 1 0 0 0 0 0 0 0
..........................................................................................TGGTAGAAAATGAAGAACAAG............................................................................................................................................ 21 3 15 0.07 1 1 0 0 0 0 0 0 0
................................................................................................................................................AAAAAAAAATACCCCACACC....................................................................................... 20 2 17 0.06 1 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................CGCCTTTCAGCGAGGGACCACTGT........... 24 0 19 0.05 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CGCCTTTCAGCGAGGGACCACTG............ 23 0 19 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCGCCTTTCAGCGAGGGACCACTGT........... 25 0 19 0.05 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................................TCTGTTGCCACAGCTAAAAA........................................... 20 3 20 0.05 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCGCCTTTCAGCGAGGGA.................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCCTTTCAGCGAGGGACCACTG............ 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGGCGCCTTTCAGCGAGGGAC................. 21 0 20 0.05 1 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................GCGCCTTTCAGCGAGGGACCA............... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTTTCAGCGAGGGACCACTG............ 20 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCAGCGAGGGACCACTGTAA......... 20 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GAAAGGCGCCTTTCAGCGAGGG................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GGCGCCTTTCAGCGAGGGA.................. 19 0 20 0.05 1 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................TTCAGCGAGGGACCACTG............ 18 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTTTCAGCGAGGGACCACTGTA.......... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTCAGCGAGGGACCACTGT........... 19 0 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

ACGATAAGGATACAATGAAAGTAATTGAGGCTCCGTCAGGACGGAGCTATCGGCACTTGCGCTTTCAAGGGTTTTGAATTAAATAAAACGACCAACTTTTACTTTTTTTTCCAAATATTATCATTGTTGTTTTTGTTTTTTTAATCTTTTTTTATGGGGTTTGGAAAGTTTATAGGGGGGGAAAAAATAGACAAAGGTGTCGAAGTTTTGCTTTCCGCGGAAAGTCGCTCCCTGGTGACATGACTTCGACA
*****************************************************************************************************************************************..(((.....................((((((((........)))))))).......)))******************************************************
Read size # Mismatch Hit Count Total Norm Total M040
female body
SRR902010
ovaries
M059
embryo
SRR902011
testis
GSM343916
embryo
V112
male body
GSM444067
head
............................................AGCTATCGGCACTTGCGCTTTCAAGGGT................................................................................................................................................................................... 28 0 1 57.00 57 5 48 0 4 0 0 0
.............................................GCTATCGGCACTTGCGCTTTCAAGGGT................................................................................................................................................................................... 27 0 1 24.00 24 3 16 0 5 0 0 0
........................................................................TTTGAATTAAATAAAACGACCAACTTT........................................................................................................................................................ 27 0 1 23.00 23 10 3 9 1 0 0 0
......................................GGACGGAGCTATCGGCACTTGCGCT............................................................................................................................................................................................ 25 0 1 22.00 22 18 4 0 0 0 0 0
..............................................CTATCGGCACTTGCGCTTTCAAGGGT................................................................................................................................................................................... 26 0 1 21.00 21 10 6 2 3 0 0 0
........................................................................TTTGAATTAAATAAAACGACCAACTTTT....................................................................................................................................................... 28 0 1 20.00 20 9 6 5 0 0 0 0
.........................................................................TTGAATTAAATAAAACGACCAACTTTT....................................................................................................................................................... 27 0 1 16.00 16 9 3 2 2 0 0 0
........................................................................................................................................................................................................CGAAGTTTTGCTTTCCGCGGAAAGT.......................... 25 0 1 16.00 16 13 1 0 0 1 1 0
...............................................TATCGGCACTTGCGCTTTCAAGGGT................................................................................................................................................................................... 25 0 1 16.00 16 3 11 0 2 0 0 0
.............................................................................................................................................................................................GACAAAGGTGTCGAAGTTTTGCTT...................................... 24 0 1 11.00 11 4 4 0 1 2 0 0
...........ACAATGAAAGTAATTGAGGCTCCGT....................................................................................................................................................................................................................... 25 0 1 10.00 10 4 2 1 3 0 0 0
................GAAAATAATTGAGGCTCCGTCAGGAC................................................................................................................................................................................................................. 26 1 1 9.00 9 2 3 0 3 0 1 0
....................................CAGGACGGAGCTATCGGCACTTGCGCT............................................................................................................................................................................................ 27 0 1 8.00 8 8 0 0 0 0 0 0
.................................CGTCAGGACGGAGCTATCGGCACT.................................................................................................................................................................................................. 24 0 1 8.00 8 8 0 0 0 0 0 0
................................................ATCGGCACTTGCGCTTTCAAGGGT................................................................................................................................................................................... 24 0 1 7.00 7 0 6 0 1 0 0 0
..........................................GGAGCTATCGGCACTTGCGCT............................................................................................................................................................................................ 21 0 1 7.00 7 6 0 0 0 1 0 0
..................................................................................................................................................................................GGGAAAAAATAGACAAAGGTG.................................................... 21 0 1 7.00 7 3 0 3 0 1 0 0
...................................................................................................................................................................................................GGTGTCGAAGTTTTGCTTTCCGCGG............................... 25 0 1 6.00 6 6 0 0 0 0 0 0
.................................................................................................................................................................................GGGGAAAAAATAGACAAAGGTG.................................................... 22 0 1 6.00 6 6 0 0 0 0 0 0
........................................ACGGAGCTATCGGCACTTGCGCT............................................................................................................................................................................................ 23 0 1 6.00 6 6 0 0 0 0 0 0
.........................................................................TTGAATTAAATAAAACGACCAACTTT........................................................................................................................................................ 26 0 1 5.00 5 5 0 0 0 0 0 0
..............................................................................................................................................................................................ACAAAGGTGTCGAAGTTTTGCTTT..................................... 24 0 1 5.00 5 4 1 0 0 0 0 0
.................................................................................................................................................................................GGGGAAAAAATCGACAAAGGTG.................................................... 22 1 1 5.00 5 5 0 0 0 0 0 0
................................CCGTCAGGACGGAGCTATCGGCACT.................................................................................................................................................................................................. 25 0 1 5.00 5 5 0 0 0 0 0 0
.......................................GACGGAGCTATCGGCACTTGCGCT............................................................................................................................................................................................ 24 0 1 5.00 5 3 2 0 0 0 0 0
..............................................CTATCGGCACTTGCGCTTTCAAGGGTT.................................................................................................................................................................................. 27 0 1 5.00 5 1 1 0 3 0 0 0
................................................ATCGGCACTTGCGCTTTCAAGGGTT.................................................................................................................................................................................. 25 0 1 5.00 5 1 4 0 0 0 0 0
...........................................................................GAATTAAATAAAACGACCAACTTTT....................................................................................................................................................... 25 0 1 4.00 4 1 3 0 0 0 0 0
.......................................................CTTGCGCTTTCAAGGGTTTTGAAT............................................................................................................................................................................ 24 0 1 4.00 4 2 2 0 0 0 0 0
..................................................................................................................................................................................GGGAAAAAATCGACAAAGGTG.................................................... 21 1 1 4.00 4 4 0 0 0 0 0 0
...............................................TATCGGCACTTGCGCTTTCAAGGGTT.................................................................................................................................................................................. 26 0 1 4.00 4 4 0 0 0 0 0 0
.................................................................................................................................................................................GGGGAAAAAATCGACAAAGGT..................................................... 21 1 1 4.00 4 2 2 0 0 0 0 0
..............................................................................................................................................................................................ACAAAGGTGTCGAAGTTTTGCTT...................................... 23 0 1 4.00 4 4 0 0 0 0 0 0
...........................................................................GAATTAAATAAAACGACCAACTTT........................................................................................................................................................ 24 0 1 4.00 4 2 1 0 1 0 0 0
......................................................................................................................................................................................................GTCGAAGTTTTGCTTTCCGCGGAAAGT.......................... 27 0 1 4.00 4 4 0 0 0 0 0 0
................................................................................................................................................................................................AAAGGTGTCGAAGTTTTGCT....................................... 20 0 1 4.00 4 0 4 0 0 0 0 0
......................................GGACGGAGCTATCGGCACTTGCGCTT........................................................................................................................................................................................... 26 0 1 4.00 4 4 0 0 0 0 0 0
........................................................................TTTGAATTAAATAAAACGACCAACT.......................................................................................................................................................... 25 0 1 4.00 4 0 2 2 0 0 0 0
...........................................................................................................TTTCCAAATATTATCATTGTTGTTTT...................................................................................................................... 26 0 1 4.00 4 0 4 0 0 0 0 0
...............................TCCGTCAGGACGGAGCTATCGGCACT.................................................................................................................................................................................................. 26 0 1 3.00 3 3 0 0 0 0 0 0
.........................................................................................................................................................................................................GAAGTTTTGCTTTCCGCGGAAAGT.......................... 24 0 1 3.00 3 3 0 0 0 0 0 0
.............................................................................ATTAAATAAAACGACCAACTTTT....................................................................................................................................................... 23 0 1 3.00 3 0 3 0 0 0 0 0
.....................................AGGACGGAGCTATCGGCACTTGCGCT............................................................................................................................................................................................ 26 0 1 3.00 3 2 1 0 0 0 0 0
........................................................................TTTGAATTAAATAAAACGACCAACTT......................................................................................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0
..................................GTCAGGACGGAGCTATCGGCACT.................................................................................................................................................................................................. 23 0 4 2.50 10 7 3 0 0 0 0 0
..................................................................................................................................................................................GGGAAAAAATAGACAAAGGT..................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0
.................................CGTCAGGACGGAGCTATCGGCACTT................................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0
.......................................................................................................TTTTTTTCCAAATATTATCATTGT............................................................................................................................ 24 0 1 2.00 2 0 2 0 0 0 0 0
................GAAAGTAATTGAGGCTCCGTCAGGAC................................................................................................................................................................................................................. 26 0 1 2.00 2 0 0 0 2 0 0 0
..............................................CTATCGGCACTTGCGCTTTCAAGGTT................................................................................................................................................................................... 26 1 1 2.00 2 0 0 2 0 0 0 0
...........................................GAGCTATCGGCACTTGCGCT............................................................................................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0 0
.................................................................................................................................................................................GGGGAAAAAATCGACAAAGGTGT................................................... 23 1 1 2.00 2 2 0 0 0 0 0 0
.........................................................TGCGCTTTCAAGGGTTTTGAATTAAAT....................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0 0 0
.........ATACAATGAAAGTAATTGAGGCTCCGT....................................................................................................................................................................................................................... 27 0 1 2.00 2 0 2 0 0 0 0 0
.........................................................TGCGCTTTCAAGGGTTTTGAAT............................................................................................................................................................................ 22 0 1 2.00 2 0 2 0 0 0 0 0
..............ATGAAAGTAATTGAGGCTCCGT....................................................................................................................................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0
.................................................TCGGCACTTGCGCTTTCAAGGGTT.................................................................................................................................................................................. 24 0 1 2.00 2 1 0 1 0 0 0 0
......................................................ACTTGCGCTTTCAAGGGTTTTGAAT............................................................................................................................................................................ 25 0 1 2.00 2 0 2 0 0 0 0 0
.................................CGTCAGGACGGAGCTATCGGCAC................................................................................................................................................................................................... 23 0 1 2.00 2 1 0 0 0 1 0 0
..........................................GGAGCTATCGGCACTTGCGCTTTCA........................................................................................................................................................................................ 25 0 1 2.00 2 2 0 0 0 0 0 0
.........ATACAATGAAAATAATTGAGGCTCCGT....................................................................................................................................................................................................................... 27 1 1 2.00 2 0 2 0 0 0 0 0
...................................................................................................................................................................................................GGTGTCGAAGTTTTGCTTTCCGCGGAA............................. 27 0 1 2.00 2 0 2 0 0 0 0 0
.........................................CGGAGCTATCGGCACTTGCGCT............................................................................................................................................................................................ 22 0 1 2.00 2 2 0 0 0 0 0 0
......................................................................................................................................................................................................................................CCTGGTGACATGACTTCGACA 21 0 1 2.00 2 1 0 1 0 0 0 0
........................................................................CTTGAATTAAATAAAACGACCAACTTT........................................................................................................................................................ 27 1 1 2.00 2 0 0 2 0 0 0 0
......................................................................................................................................................................................................GTCGAAGTTTTGCTTTCCGCGGAAA............................ 25 0 1 2.00 2 1 1 0 0 0 0 0
..............................................................................................................................................................................................ACAAAGGTGTCGAAGTTTTGCTTTC.................................... 25 0 1 2.00 2 0 2 0 0 0 0 0
.........................................................................................................................................................................................................................CGGAAAGTCGCTCCCTGGTGACAT.......... 24 0 20 1.15 23 21 0 2 0 0 0 0
.....................................................................................................................................................................................................................TCCGCGGAAAGTCGCTCCCTGGTGACAT.......... 28 0 19 1.05 20 17 0 3 0 0 0 0
.................................................................................................................................................................................GGGGAAAAAATAGACAAAGGTGT................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................AGGTGTCGAAGTTTTGCTT...................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
..............................CTCCGTCAGGACGGAGCTATCGGCA.................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
..............................TTCCGTCAGGACGGAGCTAT......................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................TTAGGGGGGGAAAAAATCGACAAA........................................................ 24 2 1 1.00 1 0 0 1 0 0 0 0
.............AATGAAAGTAATTGAGGC............................................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0
.....................................AGGACGGAGCTATCGGCACTTG................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................TTTTCCAAATATTATCATTGTTGTTT....................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0
......................................................ACTTGCGCTTTCAACGGTTTTGAAT............................................................................................................................................................................ 25 1 1 1.00 1 0 1 0 0 0 0 0
..............................AACCGTCAGGACGGAGCTATCGGCACT.................................................................................................................................................................................................. 27 2 1 1.00 1 1 0 0 0 0 0 0
......................................TCCCGGAGCTATCGGCACTTGCG.............................................................................................................................................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0
.............................................GCTATCGGCACTTGCGCTTTCAAGGG.................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.......GGATACAATGAAAGTAAT.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................CCAACTTTTACTTTTTTTTCCAAAT....................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
........................................................................CTTGAATTAAATAAAACGACCAACTTTT....................................................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................................TTTCCAAATATTATCAT............................................................................................................................... 17 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................GTCGCTCCCTGGTGACATGAC....... 21 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................GGTGTCGAAGTTTTGCTTTCC................................... 21 0 1 1.00 1 0 0 0 1 0 0 0
........................................ACGGAGCTATCGGCACTTGCGC............................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................GGTGTCGAAGTTTTGCTT...................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................GCTCCCTGGTGACATGACTTCGACA 25 0 1 1.00 1 1 0 0 0 0 0 0
..............................................CTATCGGCACTTGCGCTTTCAAGGG.................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.......................................GACGGAGCTATCGGCACTTGCGC............................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0
............................................AGCTATCGGCACTTGCGCTTTCAAGGG.................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..........TACAATGAAAGTAATTGAGGCTCCGT....................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................GAAGTTTTGCTTTCCGCGGAAA............................ 22 0 1 1.00 1 1 0 0 0 0 0 0
...................................AAAAGACGGAGCTATCGGCACTTGCGCT............................................................................................................................................................................................ 28 3 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................GCTCCCTGGTGACATGACT...... 19 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CCCTGGTGACATGACTTCGAC. 21 0 1 1.00 1 1 0 0 0 0 0 0
............................GGCTCCGTCAGGACGGAGCTAT......................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................CATTGTTGTTTTTGTTTTTTTAATCT........................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................TTTGAATTAAATAAAACGACCAATTTT........................................................................................................................................................ 27 1 1 1.00 1 0 0 1 0 0 0 0
.................AAAGTAATTGAGGCTCCGTCAGGAC................................................................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0
..................................................CGGCACTTGCGCTTTCAAGGGTTTTGA.............................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................CTCCCTGGTGACATGACTTCGACA 24 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................................................................CTGGTGACATGACTTCGA.. 18 0 1 1.00 1 1 0 0 0 0 0 0
.................................................CCGGCACTTGCGCTTTCAAGGGTT.................................................................................................................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................GTGTCGAAGTTTTGCTTTCCGCGG............................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................GAAGTTTTGCTTTCCGCGGAAAG........................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................GGGGGGGAAAAAATAGACAAAGGTG.................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.........................................CGGAGCTATCGGCACTTGCGCTT........................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................CTCCCTGGTGACATGACTT..... 19 0 2 1.00 2 2 0 0 0 0 0 0
........................................................................................................................................................................................................CGAAGTTTTGCTTTCCGCGGAAA............................ 23 0 1 1.00 1 0 0 1 0 0 0 0
.......................................................CTTGCGCTTTCAAGGGTTTTGAA............................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................ACAAAGGTGTCGAAGTTTTGCT....................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAGTCGCTCCCTGGTGACATGAC....... 24 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................CTTTTTTTATGGGGTTTGGAAAGTT................................................................................. 25 0 1 1.00 1 0 0 0 0 0 1 0
................................CCGTCAGGACGGAGCTATCGGCACTT................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................GGGGGAAAAAATAGACAAAGGTG.................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................CGCTCCCTGGTGACATGACT...... 20 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................TTTTCCAAATATTATCATTGTTGT......................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
...................................................GGCACTTGCGCTTTCAAGGGTT.................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTCGCTCCCTGGTGACATGACTT..... 23 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAGTCGCTCCCTGGTGACATGACT...... 24 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................CGCTCCCTGGTGACATGACTTC.... 22 0 1 1.00 1 1 0 0 0 0 0 0
................................CCGTCAGGACGGAGCTATCGGCA.................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0
......................................GGACGGAGCTATCGGCACTTGCGC............................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
....................................................GCACTTGCGCTTTCAAGGGTTTTGAAT............................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGAAGTTTTGCTTTCCGCGGAAAG........................... 26 0 1 1.00 1 1 0 0 0 0 0 0
....................................CAGGACGGAGCTATCGGCACTTGCGC............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................................AAATCGACAAAGGTGTCGAAGTTTTGCTT...................................... 29 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................TATTATCGTTGTTGTTTTTGTTTT................................................................................................................ 24 1 2 1.00 2 0 0 0 2 0 0 0
......................................................................................................................................................TTTATGGGGTTTGGAAAGTTTAT.............................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................CAAGGGTTTTGAATTAAATAAA.................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................CTTGAATTAAATAAAACGACCAACT.......................................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0 0
.....AAGGATACAATGAAAGTAATTGAGGCT........................................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0
......................................GGACGGAGCTATCGGCACTTGCG.............................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0
................................................ATCGGCACTTGCGCTTTCAAGGG.................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................CCTGAATTAAATAAAACGACCAACTTTT....................................................................................................................................................... 28 2 1 1.00 1 0 0 1 0 0 0 0
....................................CAGGACGGAGCTATCGGCACTT................................................................................................................................................................................................. 22 0 3 1.00 3 1 2 0 0 0 0 0
....................................................................................................................................................................................................................................TCCCTGGTGACATGACTTCGACA 23 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................TATCATTGTTGTTTTTGTTTTTTTAAT.......................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0
.................................................................................................................................................................................GGGGAAAAAATCGACAAAGG...................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................GGGGAAAAAATCGACAAAGGTGTC.................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................AGACAAAGGTGTCGAAGTTTTGCTTTC.................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
....................................CAGGACGGAGCTATCGGCACTTGCGCTT........................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
..........................................GGAGCTATCGGCACTTGCGCTTTCAAG...................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................TTTACTTTTTTTTCCAAATATTATCAT............................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................................................AAAGGTGTCGAAGTTTTGCTTTCCGC................................. 26 0 1 1.00 1 0 1 0 0 0 0 0
.CGATAAGGATACAATGAAAGTAAT.................................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTCGCTCGCTGGTGACATGACTT..... 23 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................CAAAGGTGTCGAAGTTTTGCTTTCC................................... 25 0 1 1.00 1 0 0 0 0 0 0 1
............................................GGCTATCGGCACTTGCGCTTTCAAGGGT................................................................................................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0
...........................................GAGCTATCGGCACTTGCGC............................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
..................................................................................................................................................................................GGGAAAAAATAGATAAAGGT..................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGAAGTTTTGCTTTCCGCGGAAAA........................... 26 1 1 1.00 1 1 0 0 0 0 0 0
..........................................................................TGAATTAAATAAAACGACCAACTTTT....................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................GGTTTGAATTAAATAAAACGACCAACTTTT....................................................................................................................................................... 30 1 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................................TCGAAGTTTTGCTTTCCGCGGAAAGT.......................... 26 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................GAATTAAATAAAACGACCAACTTTAC...................................................................................................................................................... 26 2 1 1.00 1 0 0 0 1 0 0 0
.................................................................................................................................................................................................................................CGCTCCCTGGTGACATGACTTCGACA 26 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................TAAATAAAACGACCAACTTTTACTTT.................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................TTTTGAATTAAATAAAACGACCAACTTT........................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................TTTGAATTAAATAAAACGACCAACTTTG....................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................GAGGTGTCGAAGTTTTGCTTT..................................... 21 1 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................GGAAAAAATCGACAAAGGTG.................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
................................CAGTCAGGACGGAGCTATCGGCACT.................................................................................................................................................................................................. 25 1 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................................................................................TGGAAAGTTTATAGGGGG........................................................................ 18 0 1 1.00 1 0 1 0 0 0 0 0
................................CCGTCAGGACGGAGCTATCGGCAC................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
......................................CGACGTAGCTATCGGCACTCGCGCT............................................................................................................................................................................................ 25 3 1 1.00 1 0 0 0 0 1 0 0
........................................ACGGAGCTATCGGCACTTGCGCTT........................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
...............TGAAAGTAATTGAGGCTCCGT....................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAGTCGCTCCCTGGTGACATGACT...... 25 0 1 1.00 1 1 0 0 0 0 0 0
............................................AGCAATCGGCACTTGCGCTTTCAAGGGT................................................................................................................................................................................... 28 1 1 1.00 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................GTCGCTCCCTGGTGACATGACTTC.... 24 0 1 1.00 1 1 0 0 0 0 0 0
.......................................GACGGAGCTATCGGCACTTGCGCTT........................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
....................................CAGGACGGAGCTATCGGCACT.................................................................................................................................................................................................. 21 0 4 1.00 4 3 1 0 0 0 0 0
................................CCGTCAGGACGGACCTATCGGCA.................................................................................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0
......................................................................................................................................................................................................GTCGAAGTTTTGCTTTCCGCGGAA............................. 24 0 1 1.00 1 1 0 0 0 0 0 0
.CGATAAGGATACAATGAAAATAATT................................................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CCCTGGTGACATGACTTCGACA 22 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................CACTTGCGCTTTCAAGGGTTTTGAAT............................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................................................................................................GTGTCGAAGTTTTGCTTTCCGCGGAAA............................ 27 0 1 1.00 1 1 0 0 0 0 0 0
.........................................CGGAACTATCGGCACTTGCGCT............................................................................................................................................................................................ 22 1 1 1.00 1 0 0 0 0 1 0 0
...............................................TATCGGCGCTTGCGCTTTCAAGGGT................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................................................................................................GGAAAAAATAGACAAAGGTGT................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
...................................................GGCACTTGCGCTTTCAAGGGT................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
........................................TCGGAGCTATCGGCACTTGCGCT............................................................................................................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0 0
..............................CACCGTCAGGACGGAGCTATCGGCACT.................................................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0 0
..................................................CGGCACTTGCGCTTTCAAGGGT................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................GACAAAGGTGTCGAAGTTTTGCTTT..................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................TTTTTATGGGGTTTGGAAAGTTTAT.............................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................CACTTGCGCTTTCAAGGGTTTTGA.............................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................CCGCGGAAAGTCGCTCCCTGGTGACAT.......... 27 0 19 0.68 13 9 0 4 0 0 0 0
...................................TCAGGACGGAGCTATCGGCACTT................................................................................................................................................................................................. 23 0 3 0.67 2 2 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGAAAGTCGCTCCCTGGTGACAT.......... 23 0 20 0.65 13 12 1 0 0 0 0 0
.......................................................................................................................................................................................................................CGCGGAAAGTCGCTCCCTGGTGACAT.......... 26 0 19 0.53 10 9 0 1 0 0 0 0
.AGATAAGGATACAATGAAAG...................................................................................................................................................................................................................................... 20 1 2 0.50 1 0 1 0 0 0 0 0
...........................................................................................................................................................................................................................GAAAGTCGCTCCCTGGTGACAT.......... 22 0 20 0.50 10 10 0 0 0 0 0 0
........................................................................TTTGAATTAAATAAAACGACCAACCTT........................................................................................................................................................ 27 1 2 0.50 1 0 0 1 0 0 0 0
.....................................AGGACGGAGCTATCGGCACT.................................................................................................................................................................................................. 20 0 4 0.50 2 2 0 0 0 0 0 0
.................................................................................................................................................................................................................GCTTTCCGCGGAAAGTCGCTCCCT.................. 24 0 14 0.50 7 6 0 0 0 0 1 0
.....................................................................................................................................................................................................................................CCCTGGTGACATGACTTC.... 18 0 2 0.50 1 1 0 0 0 0 0 0
......................................GGACGGAGCTATCGGCACT.................................................................................................................................................................................................. 19 0 4 0.50 2 1 1 0 0 0 0 0
........................................................................CTTGAATTAAATAAAACGACCAACCTT........................................................................................................................................................ 27 2 2 0.50 1 0 0 1 0 0 0 0
...............................................................................................................................................................................................................TTGCTTTCCGCGGAAAGTCGCTCCCT.................. 26 0 12 0.33 4 2 1 1 0 0 0 0
................................................................................................................AATTATTATCGTTGTTGTTTTTGT................................................................................................................... 24 2 6 0.33 2 0 0 0 2 0 0 0
......................................................................................................................TATCGTTGTTGTTTTTGTTTTTT.............................................................................................................. 23 1 3 0.33 1 0 0 0 0 0 1 0
......................................GGACGGAGCTATCGGCACTT................................................................................................................................................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0
..................................GTCAGGACGGAGCTATCGGCACTT................................................................................................................................................................................................. 24 0 3 0.33 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................ACCTGGTGACATGACTTCGA.. 20 1 4 0.25 1 1 0 0 0 0 0 0
....TAAGGATATAATGCGAGTAATT................................................................................................................................................................................................................................. 22 3 4 0.25 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................TGCTTTCCGCGGAAAGTCGCTCCCT.................. 25 0 12 0.25 3 3 0 0 0 0 0 0
....................................CGGGACGGGGCTATCGGCACT.................................................................................................................................................................................................. 21 2 4 0.25 1 0 1 0 0 0 0 0
.AGATAAGGATACAATGAAAA...................................................................................................................................................................................................................................... 20 2 5 0.20 1 0 1 0 0 0 0 0
......TGGATGCAATGAAAGTAA................................................................................................................................................................................................................................... 18 2 5 0.20 1 0 0 0 0 0 1 0
...............................................................................................................................................................................................................ATGCTTTCCGCGGAAAGTCGCTCCCT.................. 26 1 12 0.17 2 2 0 0 0 0 0 0
......TGGATGCAATGAAAGTAATG................................................................................................................................................................................................................................. 20 3 7 0.14 1 0 0 0 0 0 1 0
..............................................................................................................................................................................................ACCAAGGTGTCGAACATTTG......................................... 20 3 8 0.13 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCGCGGAAAGTCGCTCCCTGGTGACA........... 27 0 19 0.11 2 2 0 0 0 0 0 0
......................................................................................................................................................................................................................CCGCGGAAAGTCGCTCCCTGGTGACA........... 26 0 19 0.11 2 2 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCGCGGAAAGTCGCTCCCTGGT............... 23 0 19 0.11 2 2 0 0 0 0 0 0
.......................................................................................................................................................................................................................CGCGGAAAGTCGCTCCCTGGT............... 21 0 20 0.10 2 2 0 0 0 0 0 0
......................................................................................................................................................................................................................AAACGGAAAGTCGCTCCCTGGTGACAT.......... 27 3 20 0.10 2 1 0 0 0 1 0 0
.........................................................................................................................................................................................................................TGGAAAGTCGCTCCCTGGTGACAT.......... 24 1 20 0.10 2 2 0 0 0 0 0 0
.......................................................................................................................................................................................................................AACGGAAAGTCGCTCCCTGGTGACAT.......... 26 2 20 0.10 2 2 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGGAAAGTCGCTCCCTGGTGACA........... 23 0 20 0.10 2 2 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGCTTTCCGCGGAAAGTCGCTCCC................... 25 0 12 0.08 1 0 0 1 0 0 0 0
.............................................................................................................................................................................................................TCTTGCTTTCCGCGGAAAGTCGCTCCCT.................. 28 1 12 0.08 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................AATTGCTTTCCGCGGAAAGTCGCTCCC................... 27 2 12 0.08 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGAAAGTCGCTCCCTGGTGACATTAAA...... 27 3 13 0.08 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................AGCTTTCCGCGGAAAGTCGCTCCCT.................. 25 1 14 0.07 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGCTTTCCGCGGAAAGTCGCT...................... 22 0 15 0.07 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................GTCGAGGTTTTGGTTTCCGCAGAAA............................ 25 3 16 0.06 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CCCTGGTGACATGACTCGA... 19 3 18 0.06 1 0 0 1 0 0 0 0
......................................................................................................................................................................................................................CCGCGGAAATTCGCTCCCTGGT............... 22 1 19 0.05 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TCGCGGAAAGTCGCTCCCTGGTGACAT.......... 27 1 19 0.05 1 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................AGAGGAAAGTCGCTCCCTGGTGACAT.......... 26 2 19 0.05 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCGCGGAAAGTCGCTCCCTGGTGACA........... 28 0 19 0.05 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................CCCGCGGAAAGTCGCTCCCTGGTGACAT.......... 28 1 19 0.05 1 0 0 1 0 0 0 0
......................................................................................................................................................................................................................CCGCGGAAAGTCGCTCCCTGGTGAAAT.......... 27 1 19 0.05 1 0 0 1 0 0 0 0
......................................................................................................................................................................................................................CCGCGGAAATTCGCTCCCTGGTGACAT.......... 27 1 19 0.05 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCCGCGGAAAGTCGCTCCCTGGTGAAAT.......... 28 1 19 0.05 1 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................CGCGGAAAGTCGCTCCCTGGTGACA........... 25 0 19 0.05 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................CCGCGGAAAGTCGCTCCCTGGT............... 22 0 19 0.05 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGAAAGTCGCTCCCTGGTGACA........... 23 1 20 0.05 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCCGCGGAAAGTCGCTCCC................... 20 0 20 0.05 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................CCCGCGGAAAGTCGCTCCCTGGTGATAT.......... 28 2 20 0.05 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................CAGAAAGTCGCTCCCTGGTGACAT.......... 24 1 20 0.05 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................AGGAAAGTCTCTCCCTGGTGACAT.......... 24 2 20 0.05 1 0 0 0 0 0 1 0
..................................................................................................................................................................................................................CTTTCCGCGGAAAGTCGCTCCC................... 22 0 20 0.05 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................AAAGTCGCTCCCTGGTGAC............ 19 0 20 0.05 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................TTTCCGCGGAAAGTCGCTCCCT.................. 22 0 20 0.05 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................AGTCGCTCCCTGGTGACA........... 18 0 20 0.05 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGGAAAGTCGCTCCCTGGTGACAT.......... 24 1 20 0.05 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................ACGGAAAGTCGCTCCCTGGTGACAT.......... 25 1 20 0.05 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................AGAAAGTCGCTCCCTGGTGACAT.......... 23 1 20 0.05 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CGGAAAGTCGCTCCCTGGTGACATC......... 25 1 20 0.05 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................GGAAAGTCGCTCCCTGGTGACA........... 22 0 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group3b:9498-9748 + dps_2875 TGCTATTCCTATGTTACTTTCATTAACTCCGAGGCAGTCCTGCCTCGATAGCCGTGAACGCGAAAGTTCCCAAAACTTAATTTATTTTG-------CTGGTTGAAAATGAAAAAAAAGGTTTATAATAGTAACAACAAAAACAAAAAAATTAGAAA--------------------A---AA--ATACCCCAAACCTTTCAAATATCCCCCCCTTTTTTATCTGTTTCCACAGCTTCAAAACGAAAGGCGCCTTTCAGCGAGGGACCACTGTACTGAAGCTGT
droPer2 scaffold_56:28362-28582 + TGCTATTCCTATGTTACTTTCATTAACTCCGAGGCAGTCCTGCCTCGATAGCCGTGAACGCGAAAGTTCCCAAAACTTAATTTATTTTG-------ATGGTTGAAAAT----------------------------------AAAAAAATTAGAA----------------AAAAAA---AA--ATACCCCAAACCTTTCAAATATCCCCCCCTTTTTTAGCTGTTTCCACAGCTTCAAAACGAAAGGCGCCTTTCAGCGAGGGACCACTGTACTGAAGCTGT
droBip1 scf7180000391658:453-490 + --------------------------------------------------------------------------------------------------------------------------ATAATAATAATAACACAAAAGTAAAAA----------------------GTAAAAAAAAA-----------------------------------------------------------------------------------------------------
droBia1 scf7180000297427:11531-11644 - ---------------------------------------------------------------AAGGACCCAAAAATGAATTCATTTTATTAATGAATGGTGG-AAAG-------------------------CAAAAACGAAAACAAAAACAACAACAACAGAATCAAAAACAACAACAACAACTAAACCAAGGACTACAAA--------------------------------------------------------------------------------
droEug1 scf7180000409184:1191355-1191403 + --------------------------------------------------------------------------------------------------------------AAAAAGAGAACGAGAATAACAACAACAAAAAGCGAAAA-----------------------GCGAAAGAAAA-----------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_4296:4018-4057 + --------------------------------------------------------------------------------------------------------------------------ATAATGGTAACAAAAAAAGGAAAAAAATAGAAGA--------------------A---GA--ATA------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGCTATTCCTATGTTACTTTCATTAACTCCGAGGCAGTCCTGCCTCGATAGCCGTGAACGCGAAAGTTCCCAAAACTTAATTTATTTTG-------CTGGTTGAAAATGAAAAAAAAGGTTTATAATAGTAACAACAAAAACAAAAAAATTAGAAA--------------------A---AA--ATACCCCAAACCTTTCAAATATCCCCCCCTTTTTTATCTGTTTCCACAGCTTCAAAACGAAAGGCGCCTTTCAGCGAGGGACCACTGTACTGAAGCTGTSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.................................................................................................TGGTTGAAAATGAAAAAAAAGGTT..................................................................................................................................................................2417.0070500000200
..............................................................................................................................................................................................................................................................TCAGCGAGGGACCACTGTACT........2116.0060600000000
..............................................................................................................................................................................................................................................................TCAGCGAGGGACCACTGTAC.........2016.0060600000000
.................................................................................................TGGTTGAAAATGAAAAAAAAGGT...................................................................................................................................................................2315.0050100000400
................................................................................................CTGGTTGAAAATGAAAAAAAAGGT...................................................................................................................................................................2414.0040200000200
........................................TGCCTCGATAGCCGTGAACGCGAAAG.........................................................................................................................................................................................................................2613.0030300000000
...........TGTTACTTTCATTAACTCCGAGG.........................................................................................................................................................................................................................................................2312.0020000000200
.............................................................................................................................................................................................................................CTGTTTCCACAGCTTCAAAACGA.......................................2312.0020200000000
................................................................................................CTGGTTGAAAATGAAAAAAAAGG....................................................................................................................................................................2312.0020200000000
...............................................................................................................................................................................................................................................................CAGCGAGGGACCACTGTACTGAAGT...2512.0020200000000
..............................................................................................................................................................................................................................................................TCAGCGAGGGACCACTGTACTGAAG....2512.0020200000000
........................................TGCCTCGATAGCCGTGAACGCGAAAGT........................................................................................................................................................................................................................2712.0020100001000
.......................................................................................TG-------CTGGTTGAAAATGAAAAAAAAG.....................................................................................................................................................................2412.0020000000200
..............................................................................................................................................................................................................................................................TCAGCGAGGGACCACTGTACTGAAGC...2612.0020200000000
....................................................................................................................................................................................................................................CACAGCTTCAAAACGAAAGGCGCCT..............................2511.0010100000000
......................................................TGAACGCGAAAGTTCCCAAAACT..............................................................................................................................................................................................................2311.0010100000000
................................................................................................CTGGTTGAAAATGAAAAAAAAGGTT..................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................CGAGGGACCACTGTACT........1711.0010000000100
.......................................................................................TG-------CTGGTTGAAAATGAAAAAAAAGGTT..................................................................................................................................................................2711.0010100000000
..............TACTTTCATTAACTCCGAGGCAGTCC...................................................................................................................................................................................................................................................2611.0010100000000
.........TATGTTACTTTCATTAACTCCGAG..........................................................................................................................................................................................................................................................2411.0010100000000
................................................................................................CTGGTTGAAAATGAAAAAAAAGGTTT.................................................................................................................................................................2611.0010100000000
........................................TGCCTCGATAGCCGTGAACGC..............................................................................................................................................................................................................................2111.0010100000000
...............................................ATAGCCGTGAACGCGAAAGTTCC.....................................................................................................................................................................................................................2311.0010100000000
......TCCTATGTTACTTTCATTAACT...............................................................................................................................................................................................................................................................2211.0010100000000
........................................TGCCTCGATAGCCGTGAACGCGAAA..........................................................................................................................................................................................................................2511.0010100000000
...............................................ATAGCCGTGAACGCGAAAGTTCCC....................................................................................................................................................................................................................2411.0010100000000
...............................................................................................................................................................................................................................................................CAGCGAGGGACCACTGTACTGAAGC...2511.0010000000010
.................................................................................................TGGTTGAAAATGAAAAAAAAGG....................................................................................................................................................................2211.0010100000000
.......................................................................................TG-------CTGGTTGAAAATGAAAAAAAG......................................................................................................................................................................2311.0010000000100
..................................................................................................................................................................................................................................TCCACAGCTTCAAAACGAAAGGCGCCTT.............................2811.0010100000000
...............ACTTTCATTAACTCCGAGGCAGTCC...................................................................................................................................................................................................................................................2511.0010100000000
..........................................................................................................................................................................................................................................................CCTTTCAGCGAGGGACCACTGTACTA.......2611.0010100000000
...............................................................................................................................................................................................................................................................CAGCGAGGGACCACTGTACT........2011.0010100000000
....................................................................................................................................................................................................................................CACAGCTTCAAAACGAAAGGCGCCTT.............................2611.0010100000000
......TCCTATGTTACTTTCATTAACTCCGAC..........................................................................................................................................................................................................................................................2711.0010100000000
.......................................................................................TG-------CTGGTTGAAAATGAAAAAAG.......................................................................................................................................................................2220.5010000000100
..............................................................................................................................................................................................................................................................TCAGCGAGGGACCACTGTA..........19200.1530300000000
......................................................................................................................................................................................................................................................GGCGCCTTTCAGCGAGGGAC.................20200.1020100010000
...............................................................................................................................................................................................................................................AACGAAAGGCGCCTTTCAGCGAGG....................24120.0810100000000
........................................................................................................................................................................................................................................................CGCCTTTCAGCGAGGGACCACTGT...........24190.0510100000000
........................................................................................................................................................................................................................................................CGCCTTTCAGCGAGGGACCACTG............23190.0510100000000
.......................................................................................................................................................................................................................................................GCGCCTTTCAGCGAGGGACCACTGT...........25190.0510100000000
.......................................................................................................................................................................................................................................................GCGCCTTTCAGCGAGGGA..................18200.0510100000000
.........................................................................................................................................................................................................................................................GCCTTTCAGCGAGGGACCACTG............22200.0510100000000
.....................................................................................................................................................................................................................................................AGGCGCCTTTCAGCGAGGGAC.................21200.0510001000000
.......................................................................................................................................................................................................................................................GCGCCTTTCAGCGAGGGACCA...............21200.0510100000000
...........................................................................................................................................................................................................................................................CTTTCAGCGAGGGACCACTG............20200.0510100000000
..............................................................................................................................................................................................................................................................TCAGCGAGGGACCACTGTAA.........20200.0510100000000
..................................................................................................................................................................................................................................................GAAAGGCGCCTTTCAGCGAGGG...................22200.0510100000000
......................................................................................................................................................................................................................................................GGCGCCTTTCAGCGAGGGA..................19200.0510000001000
.............................................................................................................................................................................................................................................................TTCAGCGAGGGACCACTG............18200.0510100000000
...........................................................................................................................................................................................................................................................CTTTCAGCGAGGGACCACTGTA..........22200.0510100000000
.............................................................................................................................................................................................................................................................TTCAGCGAGGGACCACTGT...........19200.0510100000000
droPer2
TGCTATTCCTATGTTACTTTCATTAACTCCGAGGCAGTCCTGCCTCGATAGCCGTGAACGCGAAAGTTCCCAAAACTTAATTTATTTTG-------ATGGTTGAAAAT----------------------------------AAAAAAATTAGAA----------------AAAAAA---AA--ATACCCCAAACCTTTCAAATATCCCCCCCTTTTTTAGCTGTTTCCACAGCTTCAAAACGAAAGGCGCCTTTCAGCGAGGGACCACTGTACTGAAGCTGTSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...................TCATTAACTCCGAGGCAGTCCTGC................................................................................................................................................................................................................................................2416.006060000
...................TCATTAACTCCGAGGCAGTCCTGCC...............................................................................................................................................................................................................................................2512.002020000
....................CATTAACTCCGAGGCAGTCCTGC................................................................................................................................................................................................................................................2311.001010000
........................................TGCCTCGATAGCCGTGAACGCGAAAGT........................................................................................................................................................................................................................2711.001000001
....................CATTAACTCCGAGGCAGTCCTG.................................................................................................................................................................................................................................................2211.001010000
..................TTCATTAACTCCGAGGCAGT.....................................................................................................................................................................................................................................................2040.502010001
.....................................................................................................................................................................................................TTCAAATATCCCCCCCTTTTTTAGCTGTT.........................................................2930.331010000
.........TATGTTACTTTCATTAACTCCGAGGCAG......................................................................................................................................................................................................................................................2840.251010000
.........TATGTTACTTTCATTAACTCCGAGG.........................................................................................................................................................................................................................................................2540.251010000
.............................................................................................................................................................................................................................................................TTCAGCGAGGGACCACTGTACTGAA.....2550.201010000
..............................................................................................................................................................................................................................................................TCAGCGAGGGACCACTGTACTG.......2250.201100000
................................................................................................................................................................................................................................................................AGCGAGGGACCACTGTAC.........1850.201010000
..............................................................................................................................................................................................................................................................TCAGCGAGGGACCACTGTACTGAAGC...2650.201100000
.....................................................................................................................................................................................................................................................................GGGACCACTGTACTGAAGCTG.2170.141010000
.............................................................................................................................................................................................................................................................TTCAGCGAGGGACCACTGT...........19200.051010000
...............................................................................................................................................................................................................................................AACGAAAGGCGCCTTTCAGCGA......................22200.051010000
...............................................................................................................................................................................................................................................AACGAAAGGCGCCTTTCAGCGAGGG...................25200.051010000
...............................................................................................................................................................................................................................................AACGAAAGGCGCCTTTCAGCGAGG....................24200.051010000
droBip1
--------------------------------------------------------------------------------------------------------------------------ATAATAATAATAACACAAAAGTAAAAA----------------------GTAAAAAAAAA-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------------------------AAGGACCCAAAAATGAATTCATTTTATTAATGAATGGTGG-AAAG-------------------------CAAAAACGAAAACAAAAACAACAACAACAGAATCAAAAACAACAACAACAACTAAACCAAGGACTACAAA--------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
--------------------------------------------------------------------------------------------------------------AAAAAGAGAACGAGAATAACAACAACAAAAAGCGAAAA-----------------------GCGAAAGAAAA-----------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
--------------------------------------------------------------------------------------------------------------------------ATAATGGTAACAAAAAAAGGAAAAAAATAGAAGA--------------------A---GA--ATA------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
No Reads

Generated: 05/18/2015 at 05:37 AM