ID:

dps_2813

 Coordinate:

XL_group1e:12485545-12485695 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.6 -22.5 -22.4

Flybase annnotation

CDS [Dpse\GA24149-cds]; exon [dpse_GLEANR_1384:3]; intron [Dpse\GA24149-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DYakRCHelitron-
mature
  1. Unknown_group_498:18675-18697 +
  2. dps_2813  XL_group1e:12485621-12485643 +
  3. 4_group5:767652-767674 +
  4. Unknown_singleton_486:3050-3072 +
  5. Unknown_group_48:28619-28641 -
  6. Unknown_singleton_2379:353-375 +
  7. 3:11132982-11133004 +
  8. 3:18238538-18238560 +
  9. 2:959160-959182 +
  10. 2:24921874-24921896 +
  11. XL_group3a:2005787-2005809 +
  12. Unknown_group_249:23303-23325 +
  13. 4_group4:5850935-5850957 +
  14. XR_group6:3836573-3836595 +
  15. Unknown_singleton_1692:1046-1068 -
  16. Unknown_group_338:3626-3648 +
  17. Unknown_singleton_2607:414-436 +
  18. Unknown_singleton_3048:1144-1166 +
  19. Unknown_singleton_1266:481-503 +
  20. Unknown_singleton_783:53-75 +
  21. Unknown_group_10:71727-71749 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CATGACTGTAGCGACTCGACTATTGATTCTGATCAAGAATATATAACTTTATGAGGCCTGTAACACTTCCCTCAGCGTGTTACACACATCTACCCTCAGCACAAATCTAATATACTCCCAAGCTCTTTGAGTATCGGGTATAAAAATAAAGCCCCAGTTCCGAGATCGATAAATTAATCCAATGTCCAATGTCATCTGCAGAGTCCTTCAGTCGCTGCAATTGTCATTTCCCGAGAATGGTCTGCAGAATT
**************************************************.(((((..((((((((..........)))))))).........)))))............(((((((....((((...))))...)))))))............(((....((.((.((((...........))))..)).))..)))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 V112
male body		 M059
embryo
..............................................................................................................................TTGAGTATCGGGTATAAAAATAA...................................................................................................... 23 0 20 1.10 22 21 0 0 1
...........................................TAACTTTATGAGGCCTGTAACACTTCCC.................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
..............................................................................................................................TTGAGTATCGGGTATAAAAATAAACCC.................................................................................................. 27 1 1 1.00 1 1 0 0 0
...............................................................................................................................TGAGTATCGGGTATAAAAATAGAGCGC................................................................................................. 27 2 4 0.25 1 0 1 0 0
..............................................................................................................................TTGAGTATCGGGTATAAAAATAAA..................................................................................................... 24 0 18 0.17 3 3 0 0 0
...............................................................................................................................TGAGTATCGGGTATAAAAATAAA..................................................................................................... 23 0 18 0.11 2 2 0 0 0
..............................................................................................................................TTGAGTATCGGGTATAATAATAAATCC.................................................................................................. 27 2 11 0.09 1 1 0 0 0
..........................................................................................................................................................................................................................AATTGTCGCTTCCCGGGAA.............. 19 3 16 0.06 1 0 0 1 0
...............TCGACTATTCATCCTGATCAAGGATA.................................................................................................................................................................................................................. 26 3 20 0.05 1 1 0 0 0
...........................................................................................................................TCATTGAGTATCGGGGATAAAAA......................................................................................................... 23 2 20 0.05 1 0 1 0 0
...............................................................................................................................TGAGTATCGGGTATAAAAAT........................................................................................................ 20 0 20 0.05 1 0 0 0 1
............................................................................................................................CTTTGAGTATCGGGTATAAA........................................................................................................... 20 0 20 0.05 1 0 0 1 0
.............................................................................................................................TTTGAGTATCGGGTATAAAAATAA...................................................................................................... 24 0 20 0.05 1 0 1 0 0
...............................................................................................................................TGAGTATCGGGTATAAAAATAA...................................................................................................... 22 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

GTACTGACATCGCTGAGCTGATAACTAAGACTAGTTCTTATATATTGAAATACTCCGGACATTGTGAAGGGAGTCGCACAATGTGTGTAGATGGGAGTCGTGTTTAGATTATATGAGGGTTCGAGAAACTCATAGCCCATATTTTTATTTCGGGGTCAAGGCTCTAGCTATTTAATTAGGTTACAGGTTACAGTAGACGTCTCAGGAAGTCAGCGACGTTAACAGTAAAGGGCTCTTACCAGACGTCTTAA
**************************************************.(((((..((((((((..........)))))))).........)))))............(((((((....((((...))))...)))))))............(((....((.((.((((...........))))..)).))..)))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
.................................................................................TGTGTGTAGATGGGAGTCGTGTTT.................................................................................................................................................. 24 0 1 2.00 2 2 0
.............TGAGCTGATAACTAAGACTAGTT....................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0
......ACATCGCTGAGCTGATAACTAAGACT........................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0
...................................................................................TGTGTAGATGGGAGTCGTGTTT.................................................................................................................................................. 22 0 1 1.00 1 1 0
........ATCGCTGAGCTGATAACTAAGACT........................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0
..................................................................................GTGTGTAGATGGGAGTCGTGTTT.................................................................................................................................................. 23 0 1 1.00 1 1 0
..................................................................................GTGTGTAGATGGGAGTCGTGTT................................................................................................................................................... 22 0 1 1.00 1 1 0
......................................................................................................................................................................GCCATTTAACCAGGTTACAGGT............................................................... 22 3 3 0.33 1 0 1
...........................................................................GCACAAGGTCTGTAGATAGG............................................................................................................................................................ 20 3 6 0.17 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1e:12485495-12485745 + dps_2813 CATGACTGTAGCGACTCGACTATTGATTCTGATCAAGAATATATA-ACTTTATGAGGCCTGTAACACTTCCCTCAG--CGTGT--TACACACATCTACCCTCAGCACAAATCTAATATACTCCCAAGC-TC------TTTGAGTATCGGGTATAAAAA-------TAAAG----------------------C--------CC----CAGT----------------------------------------------T-----------------------CCGAGATCGATAAATTA------------------A-----------------TCCAATGTCCAATGTCA---TCTGCAGAGTCCTTCAGTC---------------------------------------------------------GCTGCAA-TTGT----CATTTCCCGAGAATGGTCTGCAGAATT
droPer2 scaffold_14:1961671-1961921 + dpe_771 CGTGACTGTAGCGACTCGACTATTGATGCTGATCAAGAATATATA-ACTTTATGAGGCCTGTAACACTTCCTTCTG--CGTGT--TACACACAACTACCTTCAGCACAAATATAATATACTCCCAAGC-TC------TTTGAGTATCGGGTATAAAAA-------TAAAG----------------------T--------CC----CAGT----------------------------------------------T-----------------------CCGAGATCGATGCATTA------------------A-----------------TCCAATGTCCAACGTCA---TCTGCAGAGTCCTTCAGTC---------------------------------------------------------GCTGCAA-TTGT----CATTTCCCGAGAATGGTCTGCAGAATT
droWil2 scf2_1100000004580:598-823 + CATGGCTAGATCGACTCGGTTTTTGATCCTGATCAAGAATATATATACTTTGTGGGGTCGGAGATGCTTCCTTCTG--CCTGT--TACATACAT-------TTTGGCGACTTTAATATACCATTTCAC-CC------TATGGGTGTATGGTATAATTA-------CATTT----------------------TATAC----CT----TTTTTC------------------C------------AAGT-GTA---------------------------------------TAAACAT---------A--------------------------CCAAATGTCGGTTGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCGTGCCGAAAACG------------
droVir3 scaffold_9618:4796-5033 + CATGGCTACATCGACTCGGCTATTGATGCTGATCAAGAATATATATAGTTTATGGGGTCGTAGATACTTCCTTCTG--CCTGT--TACATTCATATGGATTTCACACAAATACAATATACCCTTATAC-CCATTTTTAATGGGCTCGGGATATAATAA-------AAAAC-------------------------------A-----CAA---ACACC-------------------------------------C--ACACCCTCAATC-ACCTAAGTGG-------------------------------------------------------CGACGTGC-AGGGCA---TTCGCAA-GACCGCAAATC---------------------------------------------------------GCTGCGA-CCAG----CATT----------------------T
droMoj3 scaffold_6540:29794092-29794306 - CAGGGCTATATCGACTCAGCTCGTCGTGCTGATCAAGAATATATATACTTTATGGGGTCTGCGATGATTCCTTCTG--CCTGT--TACATACTT-------TTCA-CAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTATAAAAA-------CTTGG----------------------C--------GC----AAAC-------------------------TTATAGACG---------------------------------------------ACAACATG------------------A-----------------TTAACAGACAAATGACA---TT-ACAAAGCCGTTCACTT---------------------------------------------------------GCTG---------------------------------------
droGri2 scaffold_14906:11407181-11407402 + TATGGTCGAATCGACTCGACTGTGGATGCTGATCAAGAATATATACTCCATATGGAGTCGTATATGCTTTCTTTTG--CCTGT--TGCATATCA-------TCGCATCACTTCATTATACCCTTTTAAGGCATTTTAAATTGGTTAAGGGTATAAAAT-------AAAAC-------------------------------A-----GCA---GCACAACAAT----------------------------------T-----------------------ACAATAACAGCATGTTA------------------A------------------CCATTATGCAAATTTG---TGTGCAT---------GTT---------------------------GCT---------------------------GCTGCAA-----------------------------------T
droAna3 scaffold_3894:6657-6879 + CATGCTTATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATGGGGTCGGAGATGTCTCCTTCAC--TGCGT--TGCACACTT-------TTGACCAAAATTATAATACCCTCT-------------GC-----AAGGGTATAAAAA-------TGCGA----------------------C--------AT----ATGAT---------------------------------------------T-----------------------TTGAAATTG-------------------------------------------T-----AAGTCATATGTG---TCTTCAGTTTT------------------------------------CTTTGTCAATCTAAGTTGTCTCTCAGTCAGTTTCAA-TTTT----CAATTT--------------------C
droBip1 scf7180000395939:13587-13826 - CATGCTCATATCAACTCAGGAGGTGATTCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCAC--TGCGT--TGCACACTT-------TTGACCAAAATTATAATACCCTCT-------------GC-----AAGGGTATAAAAA-------TGGCA----GTCAAAAAA---------T--------TG----TGGT---TTTTGTT--TATAAACATAAATTTATCTACA---------------------------------------------AT------------------------------------------------ATCG-GGATTT---TCCGCAA---------GCA---------------------------ATT---------------------------CCTGCGG-TCAGAAATTATTTTCCCAGA----TTTGCTAA--A
droKik1 scf7180000301811:4138-4346 + CATGGCTAGATCGACTCGGCTGTTGATGCTGAGCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCAC--TGCGT--TGCAAACTT-------CTGACTGAAATTATAATACCCTGC--------------------AAGGGTATAAAAA-------GAAAA----------------------G--------------G-A-----------------------------------T---------TTG-----------------------CAGAAGTCGATGATTCT------------------G-----------------TCTAATGTGCTGGGATA---TCTGTAA-----TT--------------------------------------------------------------TATGT------G----GAGTAGTTGACATTTAT-CA------A
droFic1 scf7180000453910:722804-723038 + CATACATATTTCGATTCTGCTCGTGATGCTGATCAAGAATATATATACTTTATGGGGTCTGAGGTGTCTCCTTCAC--TGCGT--TGCAAACTT-------CTGACTGAAATTATAATACCCTTTTGC-TC------TGCA-----AGGGTATAATAA-------AACAT----------------------A--------GC----AAAT----------------------------------------------A-----------------------TAAATAAATATAAATAA------------------A-----------------TTGATTATAAAATGAAA---TAAAAGTAGGAGATCGGTTTTTGAAATTTTCCAT----------------------------------------------C-----------AATTTACCAAAAATA----------AT
droEle1 scf7180000491351:39179-39405 + CATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCAC--TGCGT--TGCAAACTT-------CTGACTGAAATTATAATACCCTCT-------------GC-----AAGGGTATAAAAAA------TAAAA------------T-TCGT----TA-ATCTGAACAATCT-A-----------------------------------T---------C------------------------------------AAATTA------------------T-----------------TACTATGTCAAAAGAAA---TTTTTAAAGTTT-----------------TTACTATAACTTTAATT-----------------------------------AA-CCCT----CATTTCCCAA-----------------
droRho1 scf7180000774664:28154-28375 + CATGGCTAGATCGACTCGGCTAGTGATCCTGAACAAGAATATATATACTTTATAGGGTCGGAAACGCTTCCTTCTA--CCTGT--TACATACTT-------TTGCACGAATACAATATACCCTTTTAC-TC------TAAGAGTAACGGGTATAATTA-------AATAAGGCAATCAA----------------------------------------------------------------------------------------------------------------AA------------------------------------------TCTTTGTCGAACGTTA--------------------------AATTTTTCCGCCAAATATTAATG-AT---------------------------GCTGCAA-TTTC----TAAT-----GGGATGGTC--------T
droBia1 scf7180000297174:22009-22216 + CATGGCTAGATCGACTCGACTAGTGATCCTGAGCAAGAATATATACACTTTATGGGGTAGGAAACGCTTCCTTCTA--CCTGT--TATATACTT-------TCCGACGAATCTAGTATACTCTTTTAC-TT------TATTAGTAACGGGTATAAAAA-------TGGGC----------------------C--------CC----GTGTTC------------------T------------AGGT-AT-----------------------------------------------------------------------------------------------AACT------------GTTCCCCAATC---------------------------------------------------------GCCGC------T----CAATTACCGACGCTCAT-TACAACATT
droTak1 scf7180000412627:2221-2468 + CATGGCTAGATAGACTCGGCTAGTGATCCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGCTTCCTTCTA--GCTGT--TACATACTT-------TTGCACGAATCTAATATACCCTTTTAC-TC------TTCGAGTAACGGGTATAATGA-------TAAAT----------------------G--------------C-A-----------------------------------T---------T-------------------------TAATTTTTGATAAGTTAAGTAAGCATATGAAATGA-------------------TCTACG-AA-GGAT-----TTTTCGG--TCTT----TA---------------------------------------------------------GCCACAG-CCAG----TATTGCTCCAGAAATATCCTGGGAAAT
droEug1 scf7180000409701:4124-4364 + CATGGCTCAATCGACTTCGCTATTGATCCTGATCAAGAATATATATACTTTATAGGGTCGCAAACGCTTCCTTCTA--TCTGT--TACATACTT-------TTCAACGAATCTAGTATACCCTTTTAC-TC------TACGAGTAACGGATATAAAAA-------CCCTA----------------------C--ATTTCA-C----AAAT-T------------------T------------AAAT-TAATAA---AAACTCTTATTAAATCTTCATGG-------------------------------------------------------TGACCCCG-ACGTGA---TTTGCAGACG-------TT----------GTTTTCTAAAG----------------------------------------TGA-TTTA----AA----------------------CTT
dm3 chr3R:132336-132563 - CATGGCTTGATCGACTCGGCTATTGATCCTGATTAAGAATATATATACTTTATATAGTCGGAAACGCTTCCATGCGTACATGTAGTTTGTACTT-------TTCAAAGAATTTATTATACCCTTTTAC-TC------TACGCGTAACTGGTATAAAAA-------GAA------------------------C--------TG----AGGT----------------------------------------------T-----------------------ATGTACTCCATAAGCCA------------------ATATAGTTTCAGAAGTGG--------------ACG---TCCAAGGAGTCACTTTGTT---------------------------------------------------------ATT-CAA-TT-T----AATTTCC--------------------
droSim2 x:13898697-13898912 + CAGGGTCAGATCGACTCGGCTATGGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACACTTTCTTCTA--CCTGT--TACATAATT-------GGCAACGAATCTAGTATACCCTTTTAC-TC------TACGAGTAACGCGTATCAAAAATAATAACTTTC----------------------TACAATGTA-C----AAA---------------------T------------AAAT-AAA---------------------------------------TAAATA-------------------------------------------ACCCAAAATAA---ACTTTACACCCCTTTCTTC---------------------------------------------------------CCTGCAA------------------------------------
droSec2 scaffold_8:1306588-1306819 + CATGGTCAGATCGACTCGGCTATTGATCCAGATCAAGAATATATATACTTTATACGATCGGAAACGCTTCCTTTTG--CCTGT--TACATATTT-------TACAACGAATCTAGTTTACCCTTTTAC-TC------TACGAGTAGCGGGTATAAAAAA-AA---TAAAA----------------------C--------TC----TCG---GTAAAACTTGTACGATCACAAATTCATAAACA---------------------------------------------AT---------------A--------------------------TCAAATATTTATAAGCA---TCTACAGTTTCTCCCGGCA---------------------------------------------------------ATTACAA------------------------------------
droYak3 v2_chrUn_2684:5134-5376 - CATGGCCAGATCAACTCGACTATTGATCCTGATCAAGAATACATATTTTTTATATGGTCGGAAACGCTTCCTTCTG--CCTGT--TACATACTT-------TTCAACGAATCTAGTATACCCTTTTAC-TC------TACGAGTAACGGGTATAATAA-------CAAAG------------A-T-------GATGC----TT----ATGTTC------------------C------------AAAATGTA--------------------------------------GTAACTAA---------G--------------------------GCAAATGA------CTA---TCCG-AATGTACCTCAGAT---------------------------------------------------------ACAACATTTAGT----CAATAAACGAAAACGG---GAAGAATT
droEre2 scaffold_4690:18729153-18729378 + CTTGGCCAGATCGAATCGGCTATTGACCCTGATCAAGAATTTATATACTTTATATGGTCAAAAACGTTTCCTTCTG--ACTGT--TACATACTT-------TTCAACGAATCTAGTATAGCCTTTTAC-TC------TACGAGAAACGGGTTTAATTA-------TTTAT------------CCTCGGAAAGT--------CT----GCCT----------------------------------------------T-----------------------CCGAAAACAATGAATTC------------------G-----------------TCTGGT------TGACTTCTGAAGTAAGGTACGTAAGTC--------------------------------------------------------------GA-TTGT----CACTT---------------------C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CATGACTGTAGCGACTCGACTATTGATTCTGATCAAGAATATATA-ACTTTATGAGGCCTGTAACACTTCCCTCAG--CGTGT--TACACACATCTACCCTCAGCACAAATCTAATATACTCCCAAGC-TC------TTTGAGTATCGGGTATAAAAA-------TAAAG----------------------C--------CC----CAGT----------------------------------------------T-----------------------CCGAGATCGATAAATTA------------------A-----------------TCCAATGTCCAATGTCA---TCTGCAGAGTCCTTCAGTC---------------------------------------------------------GCTGCAA-TTGT----CATTTCCCGAGAATGGTCTGCAGAATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................TTGAGTATCGGGTATAAAAA-------TAA.................................................................................................................................................................................................................................................................................................................23201.102202110000000
...........................................TA-ACTTTATGAGGCCTGTAACACTTCCC.................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..........................................................................................................................................TTGAGTATCGGGTATAAAAA-------TAAA................................................................................................................................................................................................................................................................................................................24180.1730300000000
...........................................................................................................................................TGAGTATCGGGTATAAAAA-------TAAA................................................................................................................................................................................................................................................................................................................23180.1120200000000
...........................................................................................................................................TGAGTATCGGGTATAAAAA-------T...................................................................................................................................................................................................................................................................................................................20200.0510010000000
..................................................................................................................................C------TTTGAGTATCGGGTATAAA.............................................................................................................................................................................................................................................................................................................................20200.0510000001000
.........................................................................................................................................TTTGAGTATCGGGTATAAAAA-------TAA.................................................................................................................................................................................................................................................................................................................24200.0510000000100
...........................................................................................................................................TGAGTATCGGGTATAAAAA-------TAA.................................................................................................................................................................................................................................................................................................................22200.0510100000000
droPer2
CGTGACTGTAGCGACTCGACTATTGATGCTGATCAAGAATATATA-ACTTTATGAGGCCTGTAACACTTCCTTCTG--CGTGT--TACACACAACTACCTTCAGCACAAATATAATATACTCCCAAGC-TC------TTTGAGTATCGGGTATAAAAA-------TAAAG----------------------T--------CC----CAGT----------------------------------------------T-----------------------CCGAGATCGATGCATTA------------------A-----------------TCCAATGTCCAACGTCA---TCTGCAGAGTCCTTCAGTC---------------------------------------------------------GCTGCAA-TTGT----CATTTCCCGAGAATGGTCTGCAGAATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........CGACTCGACTATTGATGCTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
droWil2
CATGGCTAGATCGACTCGGTTTTTGATCCTGATCAAGAATATATATACTTTGTGGGGTCGGAGATGCTTCCTTCTG--CCTGT--TACATACAT-------TTTGGCGACTTTAATATACCATTTCAC-CC------TATGGGTGTATGGTATAATTA-------CATTT----------------------TATAC----CT----TTTTTC------------------C------------AAGT-GTA---------------------------------------TAAACAT---------A--------------------------CCAAATGTCGGTTGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCGTGCCGAAAACG------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................TGTCGGTTGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCG.......................................2640.75303000
....................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------TCCGC--TTTGT----CGCGTGCCGAAAACG------------26110.73808000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGC--TTTGT----CGCGTGCCGAAAACG------------25110.55606000
..........................................................................................................................................................................................................................................................TA---------------------------------------TAAACAT---------A--------------------------CCAAATGTCGGTTGT............................................................................................................................2520.50101000
.......................................................................................................................................................................................................................................................T-GTA---------------------------------------TAAACAT---------A--------------------------CCAAATGTCGGT...............................................................................................................................2420.50100010
...............................................................................................................................................................................................................................................................................................................................................CAAATGTCGGTTGTTG---CTTTCCG---------TT.....................................................................................................2520.50101000
...........................................................................................................................................................TTA-------CATTT----------------------TATAC----CT----TTTTTC------------------C------------AAG..................................................................................................................................................................................................................................2520.50101000
.....................................................................................................................................................................................................................................................................................................................................................TCGGTTGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--T...................................2640.50202000
...................................................................................................................................................................................................................................................................................................................................................................................TT---------------------------------------------------------TCCGC--TTTGT----CGCGTGCCGAAAACG------------27110.45505000
..........................................................................................................................................................................................................................................................................................................................................................TGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----...........................2580.38302010
.............................................................................................................................................................................................................................................................................................................................................................TG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGC........................25110.36403100
CATGGCTAGATCGACTCGGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.35700007
......................................................................................................................................................................................................................................................................................................................................................CGGTTGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TT..................................2630.33101000
.....................................................................................................................................................................................................................................................................................................................................................TCGGTTGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TT..................................2730.33101000
....................................................................................................................................................................................................................................................................................................................................................................TTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCGTGCCGA.................2870.29201010
.........................................................................................................................................................................................................................................................................................................................................................TTGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----...........................2640.25101000
.....................................................................................................................................................................................................................................................................................................................................................TCGGTTGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--....................................2540.25101000
......................................................................................................................................................................................................................................................................................................................................................CGGTTGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--T...................................2540.25101000
...................................................................................................................................................................................................................................................................................................................................................................TTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCGTGC....................26100.20201010
.............................................................................................................................................................................................................................................................................................................................................................TG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCG.......................26110.18202000
.....................................................................................................................................................................................................................................................................................................................................................................TCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCGTGCCG..................2670.14100001
....................................................................................................................................................................................................................................................................................................................................................................TTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCGTGCCG..................2770.14100010
..........................................................................................................................................................................................................................................................................................................................................................TGTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGC........................2880.13101000
...........................................................................................................................................................................................................................................................................................................................................................GTTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CG.........................2680.13101000
.....................................................................................................................................................................................................................................................................................................................................................................TCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCGTGC....................24100.10100010
..............................................................................CCTGT--TACATACAT-------TTTGGCGACTTT........................................................................................................................................................................................................................................................................................................................................................................26200.10202000
....................................................................................................................................................................................................................................................................................................................................................................TTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCGTGC....................25100.10100010
...........CGACTCGGTTTTTGATCCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10220000
.........................ATCCTGATCAAGAATATATATACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
.............................................................................................................................................................................................................................................................................................................................................................TG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CG.........................24110.09101000
...................................................................................................................................................................................................................................................................................................................................................................TTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCG.......................23110.09101000
..............................................................................................................................................................................................................................................................................................................................................................G---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCG.......................25110.09101000
............................................................................................................................................................................................................................................................................................................................................................TTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CG.........................25110.09101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CCGC--TTTGT----CGCGTGCCGAAAACG------------24110.09101000
....................................................................................................................................................................................................................................................................................................................................................................TTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGCGTG.....................24110.09101000
............................................................................................................................................................................................................................................................................................................................................................TTG---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGC........................26110.09101000
..............................................................................................................................................................................................................................................................................................................................................................G---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CG.........................23110.09101000
....................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------TCCGC--TTTGT----CGCGTGCCGAAAA..............24110.09101000
....................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------------TCCGC--TTTGT----CGCGTGCCGAAAAC.............25110.09101000
..............................................................................................................................................................................................................................................................................................................................................................G---CTTTCCG---------TTT---------------------------------------------------------TCCGC--TTTGT----CGC........................24110.09101000
.................................................................................GT--TACATACAT-------TTTGGCGACTTTAATA....................................................................................................................................................................................................................................................................................................................................................................27200.05101000
..............................................ACTTTGTGGGGTCGGAGATGCTTCCTT................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
........................................ATATATACTTTGTGGGGTCGGAGATGC......................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100100
..........................................................CGGAGATGCTTCCTTCTG--CCT........................................................................................................................................................................................................................................................................................................................................................................................................21200.05100100
..............................................ACTTTGTGGGGTCGGAGATGCTTCC..................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
droVir3
CATGGCTACATCGACTCGGCTATTGATGCTGATCAAGAATATATATAGTTTATGGGGTCGTAGATACTTCCTTCTG--CCTGT--TACATTCATATGGATTTCACACAAATACAATATACCCTTATAC-CCATTTTTAATGGGCTCGGGATATAATAA-------AAAAC-------------------------------A-----CAA---ACACC-------------------------------------C--ACACCCTCAATC-ACCTAAGTGG-------------------------------------------------------CGACGTGC-AGGGCA---TTCGCAA-GACCGCAAATC---------------------------------------------------------GCTGCGA-CCAG----CATT----------------------TSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................GTGG-------------------------------------------------------CGACGTGC-AGGGCA---TTCGCAA-...............................................................................................................2520.501000000000010000000000000000000000000000000000000000000000000000
....................................................TGGGGTCGTAGATACTTCCTTCT..............................................................................................................................................................................................................................................................................................................................................................................................................2320.501000000000000000000000000000010000000000000000000000000000000000
...................................................ATGGGGTCGTAGATACTTCCTTCTG--CC.........................................................................................................................................................................................................................................................................................................................................................................................................2720.501000000000000000000000000000010000000000000000000000000000000000
......................................................GGGTCGTAGATACTTCCTTCTG--...........................................................................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................G-------------------------------------------------------CGACGTGC-AGGGCA---TTCGCAA-GA.............................................................................................................2420.501001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GTGG-------------------------------------------------------CGACGTGC-AGGGCA---TTC....................................................................................................................2130.331000000000000000000000000000000000010000000000000000000000000000
..........................TGCTGATCAAGAATATATATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................24170.295000000000000000000000000130100000000000000000000000000000000000
.................................CAAGAATATATATAGTTTATGGGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................2670.292000000000000000000000000000000000010100000000000000000000000000
................................TCAAGAATATATATAGTTTATGGGG................................................................................................................................................................................................................................................................................................................................................................................................................................2580.252000000000000000000000000100000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GC-AGGGCA---TTCGCAA-GACCGC.........................................................................................................2150.201000000000000000000000000010000000000000000000000000000000000000
.......................TGATGCTGATCAAGAATATATATAGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................27140.142000000000000000000000000020000000000000000000000000000000000000
................................TCAAGAATATATATAGTTTATGGGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................2770.141000000000000000000000000000000001000000000000000000000000000000
.................................CAAGAATATATATAGTTTATGGGGTCG.............................................................................................................................................................................................................................................................................................................................................................................................................................2770.141000000000000000000000000010000000000000000000000000000000000000
..........................TGCTGATCAAGAATATATATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................25160.132000000000000000000000000002000000000000000000000000000000000000
.................................CAAGAATATATATAGTTTATGGGG................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131000000000000000000000000000001000000000000000000000000000000000
.....................................AATATATATAGTTTATGA..................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000000000000000000000000000000000000020000000000000000000000000
..........................TGCTGATCAAGAATATATA............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000000000000000000000000000000200000000000000000000000000000000
.................................CAAGAATATATATAGTTTATGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................23110.091000000000000000000000000010000000000000000000000000000000000000
................................TCAAGAATATATATAGTTTATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................23130.081000000000000000000000000000000000000100000000000000000000000000
..........................TGCTGATCAAGAATATATATAGTTTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................27140.071000000000000000000000000001000000000000000000000000000000000000
......................TTGATGCTGATCAAGAATATATATAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................27150.071000000000000000000000000000000000001000000000000000000000000000
..........................TGCTGATCAAGAATATATATAGTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................26150.071000000000000000000000000000000000010000000000000000000000000000
......................TTGATGCTGATCAAGAATATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000001000000000000000000000000000000000000000
.........................ATGCTGATCAAGAATATATATAGTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000001000000000000000000000000000000000
................CGGCTATTGATGCTGATCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000010000000000000000000000000000000
......................TTGATGCTGATCAAGAATATATATAGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000010000000000000000000000000000000
.................................CAAGAATATATATAGTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000010000000000000000000000000000000000000
...................................................................TTCCTTCTG--CCTGT--TACATTCAT...........................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AAATC---------------------------------------------------------GCTGCGA-CCAG----CA.........................18200.051000000000000000000000000010000000000000000000000000000000000000
..........TCGACTCGGCTATTGATGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..................GCTATTGATGCTGATCAAGAATAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
..................................................................CTTCCTTCTG--CCTGT--TACATTCA............................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
CAGGGCTATATCGACTCAGCTCGTCGTGCTGATCAAGAATATATATACTTTATGGGGTCTGCGATGATTCCTTCTG--CCTGT--TACATACTT-------TTCA-CAAAACCATTATACCCTGATTTCCCATTTTCAATGGGTTCAGGGTATAAAAA-------CTTGG----------------------C--------GC----AAAC-------------------------TTATAGACG---------------------------------------------ACAACATG------------------A-----------------TTAACAGACAAATGACA---TT-ACAAAGCCGTTCACTT---------------------------------------------------------GCTG---------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................TACTTTATGGGGTCTGCGATGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................23200.153300000
.......................TCGTGCTGATCAAGAATATAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
........TATCGACTCAGCTCGTCGTGCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
......TATATCGACTCAGCTCGTCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
................................................................TGATTCCTTCTG--CCTGT--TACA................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droGri2
TATGGTCGAATCGACTCGACTGTGGATGCTGATCAAGAATATATACTCCATATGGAGTCGTATATGCTTTCTTTTG--CCTGT--TGCATATCA-------TCGCATCACTTCATTATACCCTTTTAAGGCATTTTAAATTGGTTAAGGGTATAAAAT-------AAAAC-------------------------------A-----GCA---GCACAACAAT----------------------------------T-----------------------ACAATAACAGCATGTTA------------------A------------------CCATTATGCAAATTTG---TGTGCAT---------GTT---------------------------GCT---------------------------GCTGCAA-----------------------------------TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CATGCTTATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATGGGGTCGGAGATGTCTCCTTCAC--TGCGT--TGCACACTT-------TTGACCAAAATTATAATACCCTCT-------------GC-----AAGGGTATAAAAA-------TGCGA----------------------C--------AT----ATGAT---------------------------------------------T-----------------------TTGAAATTG-------------------------------------------T-----AAGTCATATGTG---TCTTCAGTTTT------------------------------------CTTTGTCAATCTAAGTTGTCTCTCAGTCAGTTTCAA-TTTT----CAATTT--------------------CSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................TTATGGGGTCGGAGATGTCTC...................................................................................................................................................................................................................................................................................................................................................................................................................21200.255100040
.ATGCTTATATCGACTCAGGAGGTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.255050000
...................................................................CTCCTTCAC--TGCGT--TGCACA..............................................................................................................................................................................................................................................................................................................................................................................................20200.153300000
........................................................................................ACACTT-------TTGACCAAAATTATAATACCCTC.............................................................................................................................................................................................................................................................................................................................................................29200.153030000
.ATGCTTATATCGACTCAGGAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102001001
.........................................................................CAC--TGCGT--TGCACACTT-------TTGACC..............................................................................................................................................................................................................................................................................................................................................................................23200.102001010
...............................................CTTTATGGGGTCGGAGATGTCT....................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
CATGCTTATATCGACTCAGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000
.........................................TATATACTTTATGGGGTCGGAGATGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
....................AGGTGATCCTGATCAAGAATA................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
................................................TTTATGGGGTCGGAGATGTCTC...................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
....................................................TGGGGTCGGAGATGTCTCCTTC...............................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
.........................................TATATACTTTATGGGGTCGGAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
....................................GAATATATATACTTTATGGGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
.........................................TATATACTTTATGGGGTCGGAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.........................................TATATACTTTATGGGGTCGGAGATGT......................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
.........................................................................................CACTT-------TTGACCAAAATTATA.....................................................................................................................................................................................................................................................................................................................................................................20200.051000001
droBip1
CATGCTCATATCAACTCAGGAGGTGATTCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCAC--TGCGT--TGCACACTT-------TTGACCAAAATTATAATACCCTCT-------------GC-----AAGGGTATAAAAA-------TGGCA----GTCAAAAAA---------T--------TG----TGGT---TTTTGTT--TATAAACATAAATTTATCTACA---------------------------------------------AT------------------------------------------------ATCG-GGATTT---TCCGCAA---------GCA---------------------------ATT---------------------------CCTGCGG-TCAGAAATTATTTTCCCAGA----TTTGCTAA--ASizeHit CountTotal NormTotal
No Reads
droKik1
CATGGCTAGATCGACTCGGCTGTTGATGCTGAGCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCAC--TGCGT--TGCAAACTT-------CTGACTGAAATTATAATACCCTGC--------------------AAGGGTATAAAAA-------GAAAA----------------------G--------------G-A-----------------------------------T---------TTG-----------------------CAGAAGTCGATGATTCT------------------G-----------------TCTAATGTGCTGGGATA---TCTGTAA-----TT--------------------------------------------------------------TATGT------G----GAGTAGTTGACATTTAT-CA------ASizeHit CountTotal NormTotal
No Reads
droFic1
CATACATATTTCGATTCTGCTCGTGATGCTGATCAAGAATATATATACTTTATGGGGTCTGAGGTGTCTCCTTCAC--TGCGT--TGCAAACTT-------CTGACTGAAATTATAATACCCTTTTGC-TC------TGCA-----AGGGTATAATAA-------AACAT----------------------A--------GC----AAAT----------------------------------------------A-----------------------TAAATAAATATAAATAA------------------A-----------------TTGATTATAAAATGAAA---TAAAAGTAGGAGATCGGTTTTTGAAATTTTCCAT----------------------------------------------C-----------AATTTACCAAAAATA----------ATSizeHit CountTotal NormTotal
No Reads
droEle1
CATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCAC--TGCGT--TGCAAACTT-------CTGACTGAAATTATAATACCCTCT-------------GC-----AAGGGTATAAAAAA------TAAAA------------T-TCGT----TA-ATCTGAACAATCT-A-----------------------------------T---------C------------------------------------AAATTA------------------T-----------------TACTATGTCAAAAGAAA---TTTTTAAAGTTT-----------------TTACTATAACTTTAATT-----------------------------------AA-CCCT----CATTTCCCAA-----------------SizeHit CountTotal NormTotal
No Reads
droRho1
CATGGCTAGATCGACTCGGCTAGTGATCCTGAACAAGAATATATATACTTTATAGGGTCGGAAACGCTTCCTTCTA--CCTGT--TACATACTT-------TTGCACGAATACAATATACCCTTTTAC-TC------TAAGAGTAACGGGTATAATTA-------AATAAGGCAATCAA----------------------------------------------------------------------------------------------------------------AA------------------------------------------TCTTTGTCGAACGTTA--------------------------AATTTTTCCGCCAAATATTAATG-AT---------------------------GCTGCAA-TTTC----TAAT-----GGGATGGTC--------TSizeHit CountTotal NormTotal
No Reads
droBia1
CATGGCTAGATCGACTCGACTAGTGATCCTGAGCAAGAATATATACACTTTATGGGGTAGGAAACGCTTCCTTCTA--CCTGT--TATATACTT-------TCCGACGAATCTAGTATACTCTTTTAC-TT------TATTAGTAACGGGTATAAAAA-------TGGGC----------------------C--------CC----GTGTTC------------------T------------AGGT-AT-----------------------------------------------------------------------------------------------AACT------------GTTCCCCAATC---------------------------------------------------------GCCGC------T----CAATTACCGACGCTCAT-TACAACATTSizeHit CountTotal NormTotal
No Reads
droTak1
CATGGCTAGATAGACTCGGCTAGTGATCCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGCTTCCTTCTA--GCTGT--TACATACTT-------TTGCACGAATCTAATATACCCTTTTAC-TC------TTCGAGTAACGGGTATAATGA-------TAAAT----------------------G--------------C-A-----------------------------------T---------T-------------------------TAATTTTTGATAAGTTAAGTAAGCATATGAAATGA-------------------TCTACG-AA-GGAT-----TTTTCGG--TCTT----TA---------------------------------------------------------GCCACAG-CCAG----TATTGCTCCAGAAATATCCTGGGAAATSizeHit CountTotal NormTotal
No Reads
droEug1
CATGGCTCAATCGACTTCGCTATTGATCCTGATCAAGAATATATATACTTTATAGGGTCGCAAACGCTTCCTTCTA--TCTGT--TACATACTT-------TTCAACGAATCTAGTATACCCTTTTAC-TC------TACGAGTAACGGATATAAAAA-------CCCTA----------------------C--ATTTCA-C----AAAT-T------------------T------------AAAT-TAATAA---AAACTCTTATTAAATCTTCATGG-------------------------------------------------------TGACCCCG-ACGTGA---TTTGCAGACG-------TT----------GTTTTCTAAAG----------------------------------------TGA-TTTA----AA----------------------CTTSizeHit CountTotal NormTotal
No Reads
dm3
CATGGCTTGATCGACTCGGCTATTGATCCTGATTAAGAATATATATACTTTATATAGTCGGAAACGCTTCCATGCGTACATGTAGTTTGTACTT-------TTCAAAGAATTTATTATACCCTTTTAC-TC------TACGCGTAACTGGTATAAAAA-------GAA------------------------C--------TG----AGGT----------------------------------------------T-----------------------ATGTACTCCATAAGCCA------------------ATATAGTTTCAGAAGTGG--------------ACG---TCCAAGGAGTCACTTTGTT---------------------------------------------------------ATT-CAA-TT-T----AATTTCC--------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................TTATATAGTCGGAAACGCTTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2348.25330000000000000000000000010000000000000000120000003000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000020200020000000000000000000000000000000000000103001020000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001202000000000000000000000002021000000
...............................................................................................................................................TAACTGGTATAAAAA-------GAA------------------------C--------TG----AGGT----------------------------------------------........................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTATATAGTCGGAAACGCTTCCAT................................................................................................................................................................................................................................................................................................................................................................................................................2442.75110000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001002000000000000000000000000000000000000100000000000000001000000000000020002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TTAAGAATATATATACTTTATATAGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................2721.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TATTGATCCTGATTAAGAATATATA............................................................................................................................................................................................................................................................................................................................................................................................................................................2541.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TACTTTATATAGTCGGAAACGCTTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2741.2550000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................TATAAAAA-------GAA------------------------C--------TG----AGGT----------------------------------------------T-----------------------ATGTAC..........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TAGTTTCAGAAGTGG--------------ACG---TCCAAGGA...............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................ACCCTTTTAC-TC------TACGCGTAAC......................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CAGAAGTGG--------------ACG---TCCAAGGAGTCACT.........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................G---TCCAAGGAGTCACTTTGTT---------------------------------------------------------ATT-.......................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTATATAGTCGGAAACGCTTCCATGC..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TATATAGTCGGAAACGCTTCCATGC..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................AGTGG--------------ACG---TCCAAGGAGT.............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTATATAGTCGGAAACGCTTCCATG...............................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TTTATTATACCCTTTTAC-TC------TACGCGT.........................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................ATATAGTCGGAAACGCTTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000
................................................TTTATATAGTCGGAAACGCTTCCAT................................................................................................................................................................................................................................................................................................................................................................................................................2540.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................TTTTAC-TC------TACGCGTAACTGGTATAA..............................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTGATCGACTCGGCTATTGAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....CTTGATCGACTCGGCTATTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
..................................................TATATAGTCGGAAACGCTTCCAT................................................................................................................................................................................................................................................................................................................................................................................................................2340.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTTATATAGTCGGAAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................19200.501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCCTGATTAAGAATATATATACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2440.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TATAGTCGGAAACGCTTCCAT................................................................................................................................................................................................................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................TTATATAGTCGGAAACGCTTCC..................................................................................................................................................................................................................................................................................................................................................................................................................22200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200200000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000
...................CTATTGATCCTGATTAAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.4040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TATACTTTATATAGTCGGAAACGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................25200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001010100000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCGACTCGGCTATTGATCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000001000000300000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................TACTTTATATAGTCGGAAACGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................23200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000
................................................................................................................TATTATACCCTTTTAC-TC------TAC.............................................................................................................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TATTATACCCTTTTAC-TC------TACG............................................................................................................................................................................................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TGATCCTGATTAAGAATATATA............................................................................................................................................................................................................................................................................................................................................................................................................................................2270.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ATATACTTTATATAGTCGGAAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCCTGATTAAGAATATATATACTTTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TTTATATAGTCGGAAACGCTTCCA.................................................................................................................................................................................................................................................................................................................................................................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........ATCGACTCGGCTATTGATCCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
..........................................ATATACTTTATATAGTCGGAAACGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................26200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TACTTTATATAGTCGGAAACGCTTC...................................................................................................................................................................................................................................................................................................................................................................................................................25200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTCGGCTATTGATCCTGATTAAGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TACTTTATATAGTCGGAAACGCTTCC..................................................................................................................................................................................................................................................................................................................................................................................................................26200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000200000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCTATTGATCCTGATTAAGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................22100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................ATTATACCCTTTTAC-TC------T...............................................................................................................................................................................................................................................................................................................................................1850.2010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CTATTGATCCTGATTAAGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................CTGATTAAGAATATATATACT........................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TATTGATCCTGATTAAGAATATAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TACTTTATATAGTCGGAAACGCTT....................................................................................................................................................................................................................................................................................................................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TATTGATCCTGATTAAGAATATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTATATAGTCGGAAACGCTTCCATA...............................................................................................................................................................................................................................................................................................................................................................................................................2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTCGGCTATTGATCCTGATTAAGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTGATCCTGATTAAGAATATATA............................................................................................................................................................................................................................................................................................................................................................................................................................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CGACTCGGCTATTGATCCTGATTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CGGCTATTGATCCTGATTAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTATATAGTCGGAAACGCTTC...................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCGACTCGGCTATTGATCCTGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
............................................ATACTTTATATAGTCGGAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
...........CGACTCGGCTATTGATCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
...................................................ATATAGTCGGAAACGCTTCCAA................................................................................................................................................................................................................................................................................................................................................................................................................2270.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................TTATATAGTCGGAAACGCTTCCATT...............................................................................................................................................................................................................................................................................................................................................................................................................25160.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GACTCGGCTATTGATCCTGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................GGCTATTGATCCTGATTAAGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCGGCTATTGATCCTGATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCTATTGATCCTGATTAAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ATATATATACTTTATATAGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TATATACTTTATATAGTCGGAAACGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................TACTTTATATAGTCGGAAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TATATATACTTTATATAGTCGGAAACGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................29200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................TTATATAGTCGGAAACGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TCCTGATTAAGAATATAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................18170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TATATAGTCGGAAACGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TATATACTTTATATAGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................CTTTATATAGTCGGAAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................AAGAATATATATACTTTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TATATAGTCGGAAACGCTTCC..................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................ATATATACTTTATATAGTCGG............................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CGACTCGGCTATTGATCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................TATACTTTATATAGTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
.........ATCGACTCGGCTATTGATCCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................GAATATATATACTTTATATAGTCGG............................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TATATAGTCGGAAACGCTTC...................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTATATAGTCGGAAACGCTT....................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GATCGACTCGGCTATTGATCCTGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAGGGTCAGATCGACTCGGCTATGGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACACTTTCTTCTA--CCTGT--TACATAATT-------GGCAACGAATCTAGTATACCCTTTTAC-TC------TACGAGTAACGCGTATCAAAAATAATAACTTTC----------------------TACAATGTA-C----AAA---------------------T------------AAAT-AAA---------------------------------------TAAATA-------------------------------------------ACCCAAAATAA---ACTTTACACCCCTTTCTTC---------------------------------------------------------CCTGCAA------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................TACTTTATATGGTCGGAAACACTTT...................................................................................................................................................................................................................................................................................................................................................................................................................2529.0018000000121500000000
......................................ATATATATACTTTATATGGTCGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................25204.30860000007132010630000
....................................GAATATATATACTTTATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................26203.5070000000200040064000
.............................................TACTTTATATGGTCGGAAACACTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................2653.2016000000110500000000
......................................ATATATATACTTTATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................24203.15630000000510111000000
...............TCGGCTATGGATCCTGATCAAGAATA................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000010200000000
...............TCGGCTATGGATCCTGATCAAGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300000020100000000
...............TCGGCTATGGATCCTGATCAAGAATATAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00300000010200000000
....................................GAATATATATACTTTATATGGTCGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................27202.85570000001002003618000
..........................................ATATACTTTATATGGTCGGAAACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................2672.0014000000101200010000
....................TATGGATCCTGATCAAGAATATAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000200000000
.............................................TACTTTATATGGTCGGAAACACTT....................................................................................................................................................................................................................................................................................................................................................................................................................2481.881500000072600000000
....................................GAATATATATACTTTATATGGTCGG............................................................................................................................................................................................................................................................................................................................................................................................................................25201.45290000000203001113000
....................TATGGATCCTGATCAAGAATATATA............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
................CGGCTATGGATCCTGATCAAGAATA................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
..........................................ATATACTTTATATGGTCGGAAACAC......................................................................................................................................................................................................................................................................................................................................................................................................................2590.89800000040300010000
.............................................TACTTTATATGGTCGGAAACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................2380.75600000011400000000
.......................................TATATATACTTTATATGGTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................25200.7014000000100000112000
.........................................TATATACTTTATATGGTCGGAAACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................2770.57400000020100010000
....................................GAATATATATACTTTATATGGTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................28200.551100000006030002000
.......................................TATATATACTTTATATGGTCGGAAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................2780.50400000000000040000
.......................................TATATATACTTTATATGGTCGGAAACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................2960.50300000000100020000
...........................................TATACTTTATATGGTCGGAAACACTT....................................................................................................................................................................................................................................................................................................................................................................................................................2670.43300000020100000000
......................................ATATATATACTTTATATGGTCGGAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................27200.40800000020000060000
.......................................TATATATACTTTATATGGTCGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................24200.35700000000000034000
......................................ATATATATACTTTATATGGTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................26200.35700000020320000000
..........................................ATATACTTTATATGGTCGGAAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................24100.30300000021000000000
..........................................ATATACTTTATATGGTCGGAAACACTT....................................................................................................................................................................................................................................................................................................................................................................................................................2770.29200000010100000000
...............................................CTTTATATGGTCGGAAACACTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................2450.20100000000100000000
......................................ATATATATACTTTATATGGTCGG............................................................................................................................................................................................................................................................................................................................................................................................................................23200.20400000000000031000
........GATCGACTCGGCTATGGATCCTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17100010000000000000
.........................ATCCTGATCAAGAATATATATACT........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15300000003000000000
..........................TCCTGATCAAGAATATATATACTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................26200.15300000001200000000
................................................................................................................TAGTATACCCTTTTAC-TC------TACGAGTA........................................................................................................................................................................................................................................................................................................................................26200.15300000000120000000
........................................ATATATACTTTATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................22200.15300000030000000000
......................................ATATATATACTTTATATGGTCGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300000000000003000
......................................ATATATATACTTTATATGGTCGGAAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................2870.14100000000000010000
........................................ATATATACTTTATATGGTCGGAAACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................2870.14100000000000001000
.......................................TATATATACTTTATATGGTCGGAAACAC......................................................................................................................................................................................................................................................................................................................................................................................................................2870.14100000000000010000
...........................................TATACTTTATATGGTCGGAAACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................2570.14100000010000000000
............................................ATACTTTATATGGTCGGAAACACTT....................................................................................................................................................................................................................................................................................................................................................................................................................2570.14100000000100000000
.............ACTCGGCTATGGATCCTGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14101000000000000000
.........................................TATATACTTTATATGGTCGGAAACAC......................................................................................................................................................................................................................................................................................................................................................................................................................2680.13100000000000010000
........................................ATATATACTTTATATGGTCGGAAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................2690.11100000001000000000
.....TCAGATCGACTCGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.10200000020000000000
........................................ATATATACTTTATATGGTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200000000020000000
.............................................TACTTTATATGGTCGGAAACAC......................................................................................................................................................................................................................................................................................................................................................................................................................22100.10100000000100000000
.......AGATCGACTCGGCTATGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................20120.08100000000001000000
....................................................TATGGTCGGAAACACT.....................................................................................................................................................................................................................................................................................................................................................................................................................16140.07100000000001000000
.........................................TATATACTTTATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000001000000
...............................................................................................................CTAGTATACCCTTTTAC-TC------TACGAGTC........................................................................................................................................................................................................................................................................................................................................27200.05100000000010000000
.....................................AATATATATACTTTATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000010000000000
..........................................ATATACTTTATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100000000001000000
.........................ATCCTGATCAAGAATATATATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100100000000000000
.......................................TATATATACTTTATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000000001000
....................................GAATATATATACTTTATATGGTCGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000000010000
................................................TTTATATGGTCGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
..........................................ATATACTTTATATGGTCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000000010000
..............................................................................................................TCTAGTATACCCTTTTAC-TC------TACGAGTA........................................................................................................................................................................................................................................................................................................................................28200.05100000000010000000
..........................................ATATACTTTATATGGTCGGAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000100000000
........................................ATATATACTTTATATGGTCGGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000000000010000
...................................AGAATATATATACTTTATATGGTCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000001000000000
.....................................AATATATATACTTTATATGGTCGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100000000000010000
................................................................................................................TAGTATACCCTTTTAC-TC------TACGAGTT........................................................................................................................................................................................................................................................................................................................................26200.05100000000100000000
droSec2
CATGGTCAGATCGACTCGGCTATTGATCCAGATCAAGAATATATATACTTTATACGATCGGAAACGCTTCCTTTTG--CCTGT--TACATATTT-------TACAACGAATCTAGTTTACCCTTTTAC-TC------TACGAGTAGCGGGTATAAAAAA-AA---TAAAA----------------------C--------TC----TCG---GTAAAACTTGTACGATCACAAATTCATAAACA---------------------------------------------AT---------------A--------------------------TCAAATATTTATAAGCA---TCTACAGTTTCTCCCGGCA---------------------------------------------------------ATTACAA------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................ATATATATACTTTATACGATCGGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................2625.00103070
.............................................................................................T-------TACAACGAATCTAGTTTACCCTTT............................................................................................................................................................................................................................................................................................................................................................2524.0088000
.............................................................................................T-------TACAACGAATCTAGTTTACCCTT.............................................................................................................................................................................................................................................................................................................................................................2423.5077000
......................................ATATATATACTTTATACGATCGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2523.0063030
......................................ATATATATACTTTATACGATCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................2421.5032010
..........TCGACTCGGCTATTGATCCAGATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2531.3343010
.......................................TATATATACTTTATACGATCGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2421.0022000
.............................................................................................T-------TACAACGAATCTAGTTTACCCT..............................................................................................................................................................................................................................................................................................................................................................2321.0022000
.....................................................................CCTTTTG--CCTGT--TACATATT............................................................................................................................................................................................................................................................................................................................................................................................2021.0022000
......................................ATATATATACTTTATACGATCGGAAACGC......................................................................................................................................................................................................................................................................................................................................................................................................................2921.0022000
..........TCGACTCGGCTATTGATCCAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2431.0031020
..........TCGACTCGGCTATTGATCCAGATCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.6722000
......................................ATATATATACTTTATACGATCGG............................................................................................................................................................................................................................................................................................................................................................................................................................2320.5011000
....................................................................TCCTTTTG--CCTGT--TACATATT............................................................................................................................................................................................................................................................................................................................................................................................2120.5011000
.....................................................................................................TACAACGAATCTAGTTTACCCTTT............................................................................................................................................................................................................................................................................................................................................................2420.5011000
......................................................................................................................................................................................................................................................................................................................................................TTATAAGCA---TCTACAGTTTCTCCCGT......................................................................................................2620.5010010
................................................................................................................................................................................................C--------TC----TCG---GTAAAACTTGTACGA.....................................................................................................................................................................................................................................................2120.5010010
.............................................................................................T-------TACAACGAATCTAGTTTACCCTTTTA..........................................................................................................................................................................................................................................................................................................................................................2720.5011000
......................................................................................................................................................................................................................................................................................................................................................TTATAAGCA---TCTACAGTTTCTCCC........................................................................................................2420.5011000
...............................................................................................................................................................................................................................TACGATCACAAATTCATAAACA---------------------------------------------AT---------------A--------------------------...........................................................................................................................................2520.5011000
........................................................................................................................................................................................................................AAACTTGTACGATCACAAATTCATAAAC.....................................................................................................................................................................................................................................2820.5011000
...................................................................TTCCTTTTG--CCTGT--TACATATT............................................................................................................................................................................................................................................................................................................................................................................................2220.5011000
................................................................................................................................................................................................................................ACGATCACAAATTCATAAACA---------------------------------------------AT---------------A--------------------------...........................................................................................................................................2420.5011000
.......................................TATATATACTTTATACGATCGGAAACGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................2920.5011000
.............................................................................................T-------TACAACGAATCTAGTTTACCCTTTTAC-........................................................................................................................................................................................................................................................................................................................................................2820.5011000
......................................ATATATATACTTTATACGATCGGAAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................2820.5011000
........................................ATATATACTTTATACGATCGGAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010
.....................................................................................................TACAACGAATCTAGTTTACCCTT.............................................................................................................................................................................................................................................................................................................................................................2320.5011000
.....................................................................................................................................................................TAAAA----------------------C--------TC----TCG---GTAAAACTTGTA........................................................................................................................................................................................................................................................2320.5010001
..............................................................................................................................................................................................................................................................................................................................................TCAAATATTTATAAGCA---TCTACAGT...............................................................................................................2520.5011000
................................................TTTATACGATCGGAAACGCTTCCT.................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310010
.......AGATCGACTCGGCTATTGATCCAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.3310010
.....................................................................................................................................................................TAAAA----------------------C--------TC----TCG---GTAAAACA............................................................................................................................................................................................................................................................1930.3310010
...................................................................TTCCTTTTG--CCTGT--TACATATTT-------TCT.................................................................................................................................................................................................................................................................................................................................................................................2630.3311000
..........TCGACTCGGCTATTGATCCAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.3311000
..........................................................................................................CGAATCTAGTTTACCCTTTTAC-TC------TACGA...........................................................................................................................................................................................................................................................................................................................................2930.3311000
............GACTCGGCTATTGATCCAGATCAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.2511000
...GGTCAGATCGACTCGGCTATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110100
..........TCGACTCGGCTATTGATCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
droYak3
CATGGCCAGATCAACTCGACTATTGATCCTGATCAAGAATACATATTTTTTATATGGTCGGAAACGCTTCCTTCTG--CCTGT--TACATACTT-------TTCAACGAATCTAGTATACCCTTTTAC-TC------TACGAGTAACGGGTATAATAA-------CAAAG------------A-T-------GATGC----TT----ATGTTC------------------C------------AAAATGTA--------------------------------------GTAACTAA---------G--------------------------GCAAATGA------CTA---TCCG-AATGTACCTCAGAT---------------------------------------------------------ACAACATTTAGT----CAATAAACGAAAACGG---GAAGAATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................T-------TTCAACGAATCTAGTATACCCTTTTAC-........................................................................................................................................................................................................................................................................................................................................................28200.45900900000000
droEre2
CTTGGCCAGATCGAATCGGCTATTGACCCTGATCAAGAATTTATATACTTTATATGGTCAAAAACGTTTCCTTCTG--ACTGT--TACATACTT-------TTCAACGAATCTAGTATAGCCTTTTAC-TC------TACGAGAAACGGGTTTAATTA-------TTTAT------------CCTCGGAAAGT--------CT----GCCT----------------------------------------------T-----------------------CCGAAAACAATGAATTC------------------G-----------------TCTGGT------TGACTTCTGAAGTAAGGTACGTAAGTC--------------------------------------------------------------GA-TTGT----CACTT---------------------CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................TA-------TTTAT------------CCTCGGAAAGT--------CT----GCCT----------------------------------------------T-----------------------C...............................................................................................................................................................................................2611.0010000100
.................GGCTATTGACCCTGATCAAGAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................23130.0810000100

Generated: 05/18/2015 at 05:32 AM