ID:

dps_2780

 Coordinate:

XL_group1e:10128643-10128793 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.9 -8.8 -8.7

Flybase annnotation

exon [dpse_GLEANR_1247:5]; CDS [Dpse\GA14843-cds]; intron [Dpse\GA14843-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+
CT-richLow_complexityLow_complexity+
mature
star
  1. XL_group1e:5912929-5912949 +
  2. XL_group1e:5930877-5930897 +
  3. XL_group1e:7604137-7604157 -
  4. XL_group1e:9124960-9124980 +
  5. dps_2780  XL_group1e:10128719-10128739 +
  6. XR_group3a:1362515-1362535 +
  7. 3:10345766-10345786 +
  8. 3:17736330-17736350 +
  9. 2:5966639-5966659 -
  10. 2:15050152-15050172 +
  11. 2:19931518-19931538 +
  12. XL_group3a:822240-822260 -
  13. XR_group6:175150-175170 +
  14. XR_group6:350915-350935 +
  15. XR_group6:2626180-2626200 +
  16. XR_group6:8351334-8351354 +
  17. XR_group6:10179857-10179877 +
  18. XR_group6:11021690-11021710 +
  19. XR_group6:13125334-13125354 +
  20. XL_group1a:7083890-7083910 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGAGGCGGCGGCGGCGGCGGGGGCAATTTGCTGGGGAATTTACCGTTGGGTAAGTAATATCGGAACGGATTGGATATCAACGGATATCTACCCAAAACGATCCTATATGTATATGTGTATATGTGTGTATGCGTGTGTGTGTGTGTGTGTGTTTGTGTGGCATGCAATAAAAAAAAACCTAATGGAATGGAGAATGGCTTGCTGTCTATCTATCTCTATCACACACACACTCTCTCTCTCTCTTTCTCTC
******************************************************************************************************************************..(((((......)))))..((((((((.....))))))))...........((....))..............*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902012
CNS imaginal disc
 GSM444067
head
 M040
female body
 V112
male body		 GSM343916
embryo
....................................................................................................................................................................................TAATGGAATGGAGAATGGCT................................................... 20 0 1 1.00 1 1 0 0 0 0
.................................GGGGAATTTACCGTTGGGCT...................................................................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................TGGGGAATGGCTTGCAGTCT........................................... 20 2 2 0.50 1 0 0 1 0 0
.......................................................................................................................................................................................TGGAATGGAGAGTAGCTTGGTG.............................................. 22 3 2 0.50 1 0 1 0 0 0
.......................................................................................................................................................................................TGGAATGGAGAGTGGCATTCTG.............................................. 22 3 3 0.33 1 0 1 0 0 0
.GGAGGCGGCGGCGGCGGCGGGGGGT................................................................................................................................................................................................................................. 25 2 5 0.20 1 0 1 0 0 0
.................................................................................................................................................................................................AATGGCTTGCTTTCTCTC........................................ 18 2 20 0.10 2 0 0 2 0 0
.........................................................ATATCAGAACGGAATGGA................................................................................................................................................................................ 18 2 11 0.09 1 0 0 0 1 0
...........................................................................................................................................................................................................................TCACACACACACTCTCACT............. 19 1 15 0.07 1 0 0 1 0 0
................................................................................................................TATGTGTATTAGTGTGTAGGC...................................................................................................................... 21 3 19 0.05 1 0 0 1 0 0
..............................................................................................................................TGTATGCGTGTGTGTGTGTGT........................................................................................................ 21 0 20 0.05 1 0 0 1 0 0
............................................................................................................................................TGTGTGTGTGTGTTTGTGTG........................................................................................... 20 0 20 0.05 1 0 1 0 0 0
........GCGGCGGCGGCGGGGGCC................................................................................................................................................................................................................................. 18 1 20 0.05 1 0 0 0 0 1
.......................................................................................................................................GTGTGTGTGTGTGTGTGTTTGTG............................................................................................. 23 0 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

ACCTCCGCCGCCGCCGCCGCCCCCGTTAAACGACCCCTTAAATGGCAACCCATTCATTATAGCCTTGCCTAACCTATAGTTGCCTATAGATGGGTTTTGCTAGGATATACATATACACATATACACACATACGCACACACACACACACACACAAACACACCGTACGTTATTTTTTTTTGGATTACCTTACCTCTTACCGAACGACAGATAGATAGAGATAGTGTGTGTGTGAGAGAGAGAGAGAAAGAGAG
***************************************************..(((((......)))))..((((((((.....))))))))...........((....))..............****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
.......CCGCCGCCGCCGCCCCCGTT................................................................................................................................................................................................................................ 20 0 2 0.50 1 1 0
.....................................................................................................................................................................................................................................TGAGAGAGAGAGAGAAAGAGA. 21 0 15 0.07 1 1 0
.........................................................................................ATGGGGTTTGCGAGGGTAT............................................................................................................................................... 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1e:10128593-10128843 + dps_2780 ---------TGGAG---GCGG-CG---GCGGCGGCGG----GGGCAATTTGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGAAC-----GGA----------------------TTGGAT--ATCAA-C-GGA-----TA--TCTACCCAAAACGATCCTA----TATG------TATATGT--------------------------------G------------TATATGTGTGTATG-CGTG--TGTG----------------------------------------------------------------------------T-------------------------------GTGTG-TGTG-------------------------------------------------------------TG-TTTGTGTGGCATGCAATAA------------AAA-----------------------------------------------------------------------------------------------------------------------------------------------AAAA-----------------CCTAATGG-A----ATGGAGAATGGCTTGCTGTCTATCTATCTCTATCA--CACA---------CA--------C-------------------ACT---------------------C--------------TCT------CTCTCTCTTTCTCTC
droPer2 scaffold_22:101055-101329 - ---------CGGCG---GCGG-CG---GCG---GCGGC-GGGGGCAATATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGAAC-----GGA----------------------TTGGAT--ATCAA-C-GGA-----TA--TCTACCCAT-ACGATCCCG-A--TATG------TATATGT--------------------------------G------------TATATGCGTGTTTG-TGTG--TATG----------------------------------------------------------------------------C-------------------------------G-----TGTGT---GT-------------------------------------------------------GTGTGTGTGTGGCATGCAATAA------------AAAA-------------------------------------------------------------------------------------------------------------------------------------------------A-----------------CCTAATGG-A----ATGGAGAATGGCTTGCTGTCTATCTATCTCTATCA--CACA---------CACACACT--C-------------------TCT------CTCT----CTCTCTC-TCTCTC------TCTCT----CTCTATCTTTCTTTCTC
droWil2 scf2_1100000004515:3177879-3178190 + ---------TGTC----GTCGTCGTCGGTG---GCAAC---TAGCAATATGTTGGGAAATTTACCATTAGG-T----AA----------GT-A-TTTCAATAC-----CAAA-----------------------------------------T---AC------TACAA-ACTTATATAC-----TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TAT---------------------AT----ATATA-TCTATAT-AACCCAACAAACAAATCGGGGAAAGCCCAAGTCCCCCGATTAATATAAAACAAACT-ATTTATTTGTGGCATGAA-CAA-----------TGAAAAAAAAAAGATATAGTAA-------------------ATCAAA--------------------------------------------------------------------------------------------------------------------------AAAAAGAAA----ATGGAATGTGGCTTGCTCTCTCTTGC------------------------CTGATTGCCTGCCTGCCTGATTGCCTGCCGCCTATCTGTCACTCT---------C--------------TCT------CTCTCTTTCTCTCTC
droVir3 scaffold_13047:1374852-1375143 - ---------TGGCG---GCGG-CG---GCG---GCAGC---CTA---TTTGCT----------------------------------------------T--CGCTTTTATA---------------------------------------------------------A-AAATAAATTG-----TT------CGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGTAATGATG------------CGAAAGCAATTGAGAATTCTATATATGCATTTGTCTATATGCCTACGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTTAAATGTGTGTTTGTTTGTTGTTTGTCGGAATGCGTAGAATTTCAATTGACTGTGGCAAAGCATACA-----------GATC----------TCTCGATCTCTCTAT--------------------------------------------------CTTTCA------TTCCC-----------------AAT------CTCTATCTCTATCTC
droMoj3 scaffold_6540:32974715-32974985 - ---------CGGG----GGCT-GG---GAC---GGGGG---CTGAGGCATGCTGGGG-CTGCACGGTTGAGCTCAGCAAAGTTTTGCTACGGCGTGTGGCTTA-----GG----------------------------TTAATCAATTGG-GT-----GTGTC------AGCTCAAT----ATGTGGA--GGCGTG--T----------------------------------------------GTGTGTGTGTGTGTG-TGCGTGCGTGTGTGTGTGTGTGTGTGTGTGGGCAAACTAAGTAGGCGGAGAATATAAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAAAT----------------------------------------------------------TGATGGAGCACGTGCCTGTCAGACA-----------------------------------------------------------------------TTTGTATCC--AACT--GGAG---------CA--------A-------------------AAA---------------------T--------------TAT------CAAAATTTTCTTCAT
droGri2 scaffold_14853:185966-186236 - ---------AGGG----GGGG-------GG---GGGGG---CGGAGGGTT-GTGGGGGTGTTGCTGTTCAG-C----GA----------GG-GTTGATGACTG-----CGT---------------------------TTGATTTGCTGT-AT-----TTGCT------TGACCAGC----GTGTGTG--AGAGTG--T----------------------------------------------GTGCGTGTGTGTGTG-CGTGTGCGTGTGTGTGCGTGTGTGGGTGTGTGGGAGGCAGAGAGGTAGGCAGTGTTATTATTATTGTTGTTGTTGTTGTTATC---TGTACC----ACATTTTATAATGTATAT----GC--------------------------------------------------------------------------------ATATGCATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATGTG-----------------------------------------------------------------------------------------------CGACTCT---------C--------------TCT------CTCTCTCTCTCTCTC
droAna3 scaffold_13117:4710773-4711053 - dan_1390 ---------TGCCG---GGGG-CG---ACG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGTTC-----CGT----------------------TCCGTT------------CCGCATTA--TCCATCCAA-GCGTGCGTTA-----CT------C------------------------------------------------------------------CACA--CATA----------------------------------------------------------------------------CATAC-----------------------ATATGTATGTGG----------------------------------------------------------------------TGTGGCATGCAGCAGATGCAGTAGAAGCAGCAGATGCAGCAGCAGCAGCAGCAACAGTAGTAGCAGCATCAAA--------------------------------------------------------------------------------------------------------------------------AAAAAAAAAATATATGG--AATGGCTTGCTCTGTCTCTGTCTCTGTCG------ATATCTTAG--------------------------------------T------------CAC-TCTG------------T------CTCTGTCTATCATAC
droBip1 scf7180000395814:18539-18779 - ---------CGGCAGCGGGGG-CG---ACG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGTTC-----CGT---------------------------T------------CCGCATTA--TCCATCCAA-GCGTGCGTAA-----CT------CACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGTGGCATGCAGCAG------------CAGCAGCAGCAGCAGCAGCAGCGGCAACAGTAGTAGCAGCATC-------------------------------------------------------------------------------------------------------------------------------AAA-AAA----ATGG--AATGGCTTGCTCTCTCTGTCTCT--GTCTCTGTCCATAACTTAG--------------------------------------T----CA---------C--------------TGT------CTCTGTCTTACACAC
droKik1 scf7180000302696:927857-928037 - ---------CGGG----GGCAACGGCGCCG---GGGGG---CGGAACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AAGATTGGTTC-----CGCAGAAACCCAGAATCTCTCAGAATCAGTA------------TCTCAGAA--TCCATCCAA-GTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGGCATGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGG-A----ATGG--AATGGCTTTTAGTCTCTCGCTCT--C-------------------------------------------------------------------------------------------------TCTCTCTCTCTCTT
droFic1 scf7180000453277:45759-46010 + TGGACACAGGGCG----GGGC-CC---GCG---GGGGG---CGGTACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGT--CGCTTCCACACACACACACACACACACGCACACAA-----------CAAA-----AA--TCCATCCAA-GCGTGCGTAA-----TTTT----CACG--T--------------------------------GCCTCTTGTTTT------------T----------------------------------------------------------------------------------TGAATGTC----G----------------------TGTTGTATGTTGTA-------------------------------------------------------------CGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGATT---G----ATGG--AATGGCTTTTTGTCTTTGTCTCT--CTCA------------------------------------------------------------------CA------------------C------CTCTGTCTATCTCTG
droEle1 scf7180000491023:590461-590694 - ---------GGCG----GGGG-CG---GCG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGTTC-----CACC-------------------------------------AAA-----AA--TCCATCCAA-GCGTGCGTAT-----TG------CACATGT--------------------------------G------------T---------------------------------------------------------------------------T------GTTGTT-T---TGTATGCTGTAT------------------------GCTGTGTGCTGTGT---GCT---------------------------------------------------CTATGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------GCGAATGG-A----ATGG--AATGGCTTTTTGTCTTTGTCTCT--ATCT--CTA------------------------------------------T------CTCT--GTCTCTCAC-ACTG--------------------------TCGCTGTC
droRho1 scf7180000777256:80124-80318 - ---------GGCG----GGGG-CA---GCG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGTTC-----CACA--------------------------------------AA-----AA--TCCATCCAA-GCGTGCGTAA-----TG------CACAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT--GTTTTGTGTT------------------------------------------------------ATACGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGG-A----ATGG--AATGGCTTTTTGTCTTTGTCTCT--GT----------------------------------------------------------------CTCTCAC-TCTGTC----------------------GCTGTCTCTA
droBia1 scf7180000298389:1380977-1381198 + ---------GGCG----GGCG-CG---GCG---GGGGG---CGGACCGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATGTCCGATC-----CACA--------------------------T------------CCG---CA--TCCATCCGC-GCGTGTGTCT----------------------TGTCGTCGTAATCGCCACCACCA---TTG------------T------------A--C-------------------------------------------------------CA---TT---GTTGTTGTTGTTCTTG----------G----------------------CGTTGCATGTTGCA-------------------------------------------------------------TGTTGTAGGTGGCATGCAGCAG------------CAGC-------------------------------------------------------------------------------------------------------------------------------------------------G-----------------GCGAAT---G----AAGG--AATGGCTTT-TGTCTCTGTCCC-------------------------------------------------------------------------------------------------------------CCCGCC
droTak1 scf7180000414375:293240-293451 - ---------GGCG----GGGG-CG---GCG---GGGGG---CGGACCGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCTGTTC-----CACA--------------------------------------TC-----CG--TCCATCCAA-GCGTGCATTA-----TT------CACG--TGTT-----------------------------------------------------------------------------------------------------------------GTTATT------GTTATTGT---TGTA---TGTAC---------------------------GTATGTTGTA-------------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAAC---G----ATGG--AATGGCTTTTTGTCTCTCTGACT--------------------------------------------------------------CT--GTCTCACAC-TCTGTC--------------------------GCTGTC
droEug1 scf7180000409528:63471-63669 - ---------GGCG----GGTG-CG---ACG---GGGGG---AGGAACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GTTAATATCCATTC-----AAAAAAAA--------------------------------AAAA-----GA--ACCATTCAA-GCGTATATTA-----TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTAT--TGA-------------------------------------------------------TGTTGTATGTGGCATGCAGCAG------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATA-TG----ATGG--AATGGCTTTTTGTCTTTGTCTTA--CCAC----------------A--------C-------------------ACT---------------------CTCTG-A----------G------CTCACTCTGTCTTTG
dm3 chrX:11583529-11583782 + -----------CG----GGGG-CG---GCG---GGGGGCGGTGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCTGTTC-----CACC-----------------------------------------G---AG--TCCATCCAA-GCGTGCATTG-------------------TATTATTATT---ATTATTATTATTATTATTAT-----------T------------A--T-------------------------------------------------------TA---TT------GTTGTTGC---TGTACGCTGTACG----------------------AGATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGCTTTTTGTCTTTGTCTCT--CTCT----------------G--------C-------------------GCT---------------------CTCTATTATC------------------GTCTCTATCTC
droSim2 x:10977317-10977586 + dsi_12560 ---------GGCG----GGTG-CA---GCG---GGGGGCGGCGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCTGTTC-----CACC-----------------------------------------G---AG--TCCATCCAA-GCGTGCATTG-------------------TATTATTATT---ATTATTATTATTA---TTAT-----------T------------T--T-------------------------------------------------------TA---TT------GTTGTTGC---TGTACGTTGTACG----------------------AGATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGCTTT-TGTCTTTGTCTCT--CTGT----------------G--------C-------------------GCT---------------------CTCTGTCGCCGTCTCTCTCTCTATATATATATCTCTCTC
droSec2 scaffold_36:272182-272449 + ---------GGCG----GGTG-CA---GCG---GGGGGCGGCGGCACGATGCTGGGGAATTTACCGATGGG-T----AA----------GT-AATATCTGTTC-----CACC-----------------------------------------G---AG--TCCATCCAA-GCGTGCATTG-------------------TATTATTATT---ATTATTATTATTATTTTT----------TTTT------------T--T-------------------------------------------------------TA---TT------GTTGTTGC---TGTACGTTGTACG----------------------AGATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGCTTT-TGTCTTTGTCTCT--CTCT----------------G--------C-------------------ACT---------------------CTCTGTCGCCGTCTCTCT------CTCTATATATATCTC
droYak3 X:15102108-15102372 - ---------GGCG----GGGG-CG---GCG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCTGTTC-----CACA-----------------------------------------G---CG--TTCATCCAA-GCGTGTATTG-------------------TATT-----------------------------------------------------------------------------------------------------------------ATTATTATTATTGTTGTTGC---TGTACGTTGTACGTTGTACGTTGTA----------CGATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGCTTTTTATCTTTGTCTCT--CTCTCTCACT---------CTAACTGT--C-------------------TGT------CTCT--GTCACACAC-TCTGTC----------------------GCTGTCTCTC
droEre2 scaffold_4690:3603064-3603283 - ---------GGCG----GGGG-CG---GCG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCTGTTC-----CATC-----------------------------------------G---AG--TCCATCCAA-GCGTGCATTG-------------------TATT-----------------------------------------------------------------------------------------------------------------ATTATT------GTTGTTGC---TGTACGTTGTAC------------------------GATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGCTTTTTGTCTTTGTCTCT--CT------------------G--------C-------------------GCT---------------------C--------------TCT------CTCTCTCTCTCTCTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
---------TGGAG---GCGG-CG---GCGGCGGCGG----GGGCAATTTGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGAAC-----GGA----------------------TTGGAT--ATCAA-C-GGA-----TA--TCTACCCAAAACGATCCTA----TATG------TATATGT--------------------------------G------------TATATGTGTGTATG-CGTG--TGTG----------------------------------------------------------------------------T-------------------------------GTGTG-TGTG-------------------------------------------------------------TG-TTTGTGTGGCATGCAATAA------------AAA-----------------------------------------------------------------------------------------------------------------------------------------------AAAA-----------------CCTAATGG-A----ATGGAGAATGGCTTGCTGTCTATCTATCTCTATCA--CACA---------CA--------C-------------------ACT---------------------C--------------TCT------CTCTCTCTTTCTCTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGG-A----ATGGAGAATGGCT..................................................................................................................................2011.0010000000001
.....................................................GGGGAATTTACCGTTGGG-C----T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000001
..........GGAG---GCGG-CG---GCGGCGGCGG----GGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010000010000
..............................................................................................................................................................................................................................................................TGTATG-CGTG--TGTG----------------------------------------------------------------------------T-------------------------------GTGTG-T......................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................T-------------------------------GTGTG-TGTG-------------------------------------------------------------TG-TTTGTGTG...........................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
....................G-CG---GCGGCGGCGG----GGGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000100000
........................................................................................................................................................................................................................................................................G--TGTG----------------------------------------------------------------------------T-------------------------------GTGTG-TGTG-------------------------------------------------------------TG-TTTGTG.............................................................................................................................................................................................................................................................................................................................................................23200.0510000010000
droPer2
---------CGGCG---GCGG-CG---GCG---GCGGC-GGGGGCAATATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGAAC-----GGA----------------------TTGGAT--ATCAA-C-GGA-----TA--TCTACCCAT-ACGATCCCG-A--TATG------TATATGT--------------------------------G------------TATATGCGTGTTTG-TGTG--TATG----------------------------------------------------------------------------C-------------------------------G-----TGTGT---GT-------------------------------------------------------GTGTGTGTGTGGCATGCAATAA------------AAAA-------------------------------------------------------------------------------------------------------------------------------------------------A-----------------CCTAATGG-A----ATGGAGAATGGCTTGCTGTCTATCTATCTCTATCA--CACA---------CACACACT--C-------------------TCT------CTCT----CTCTCTC-TCTCTC------TCTCT----CTCTATCTTTCTTTCTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................GCAATATGCTGGGGAATTTAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
............................................CAATATGCTGGGGAATTTACCGTTGGA-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-A----ATGGAGAATGGCTTGCTGTC...........................................................................................................................2211.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------CACACACT--C-------------------TCT------CTCT----CTC...........................................21170.061010000
droWil2
---------TGTC----GTCGTCGTCGGTG---GCAAC---TAGCAATATGTTGGGAAATTTACCATTAGG-T----AA----------GT-A-TTTCAATAC-----CAAA-----------------------------------------T---AC------TACAA-ACTTATATAC-----TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------TAT---------------------AT----ATATA-TCTATAT-AACCCAACAAACAAATCGGGGAAAGCCCAAGTCCCCCGATTAATATAAAACAAACT-ATTTATTTGTGGCATGAA-CAA-----------TGAAAAAAAAAAGATATAGTAA-------------------ATCAAA--------------------------------------------------------------------------------------------------------------------------AAAAAGAAA----ATGGAATGTGGCTTGCTCTCTCTTGC------------------------CTGATTGCCTGCCTGCCTGATTGCCTGCCGCCTATCTGTCACTCT---------C--------------TCT------CTCTCTTTCTCTCTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................GTCGTCGGTG---GCAAC---TAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200110
.................GTCGTCGTCGGTG---GCAAC---TAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGC------------------------CTGATTGCCTGCCTG..............................................................................2111.00101000
......................CGTCGGTG---GCAAC---TAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAA----ATGGAATGTGGCTTGC...............................................................................................................................2311.00100010
....................GTCGTCGGTG---GCAAC---TAGCAATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
droVir3
---------TGGCG---GCGG-CG---GCG---GCAGC---CTA---TTTGCT----------------------------------------------T--CGCTTTTATA---------------------------------------------------------A-AAATAAATTG-----TT------CGCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGTAATGATG------------CGAAAGCAATTGAGAATTCTATATATGCATTTGTCTATATGCCTACGTGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCTTAAATGTGTGTTTGTTTGTTGTTTGTCGGAATGCGTAGAATTTCAATTGACTGTGGCAAAGCATACA-----------GATC----------TCTCGATCTCTCTAT--------------------------------------------------CTTTCA------TTCCC-----------------AAT------CTCTATCTCTATCTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTGTGTGCGCGCTT......................................................................................................................................................................................................................19160.061000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGTGTGTGTGTGTGTGTGT............................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
---------CGGG----GGCT-GG---GAC---GGGGG---CTGAGGCATGCTGGGG-CTGCACGGTTGAGCTCAGCAAAGTTTTGCTACGGCGTGTGGCTTA-----GG----------------------------TTAATCAATTGG-GT-----GTGTC------AGCTCAAT----ATGTGGA--GGCGTG--T----------------------------------------------GTGTGTGTGTGTGTG-TGCGTGCGTGTGTGTGTGTGTGTGTGTGTGGGCAAACTAAGTAGGCGGAGAATATAAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAAAAT----------------------------------------------------------TGATGGAGCACGTGCCTGTCAGACA-----------------------------------------------------------------------TTTGTATCC--AACT--GGAG---------CA--------A-------------------AAA---------------------T--------------TAT------CAAAATTTTCTTCATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................GTGTGTG-TGCGTGCGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
........................................................................................................................................................................................................................................................TGTGTGTGTGTG-TGCGTGCGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
droGri2
---------AGGG----GGGG-------GG---GGGGG---CGGAGGGTT-GTGGGGGTGTTGCTGTTCAG-C----GA----------GG-GTTGATGACTG-----CGT---------------------------TTGATTTGCTGT-AT-----TTGCT------TGACCAGC----GTGTGTG--AGAGTG--T----------------------------------------------GTGCGTGTGTGTGTG-CGTGTGCGTGTGTGTGCGTGTGTGGGTGTGTGGGAGGCAGAGAGGTAGGCAGTGTTATTATTATTGTTGTTGTTGTTGTTATC---TGTACC----ACATTTTATAATGTATAT----GC--------------------------------------------------------------------------------ATATGCATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATGTG-----------------------------------------------------------------------------------------------CGACTCT---------C--------------TCT------CTCTCTCTCTCTCTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
---------TGCCG---GGGG-CG---ACG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGTTC-----CGT----------------------TCCGTT------------CCGCATTA--TCCATCCAA-GCGTGCGTTA-----CT------C------------------------------------------------------------------CACA--CATA----------------------------------------------------------------------------CATAC-----------------------ATATGTATGTGG----------------------------------------------------------------------TGTGGCATGCAGCAGATGCAGTAGAAGCAGCAGATGCAGCAGCAGCAGCAGCAACAGTAGTAGCAGCATCAAA--------------------------------------------------------------------------------------------------------------------------AAAAAAAAAATATATGG--AATGGCTTGCTCTGTCTCTGTCTCTGTCG------ATATCTTAG--------------------------------------T------------CAC-TCTG------------T------CTCTGTCTATCATACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................GCTGGGGAATTTACCGTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
....................................GG---CGGCACGATGCTGGGGAATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTAGAAGCAGCAGATGC..........................................................................................................................................................................................................................................................................................................................1911.001001000
............CG---GGGG-CG---ACG---GGGGG---CGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGCAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................19200.051100000
droBip1
---------CGGCAGCGGGGG-CG---ACG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGTTC-----CGT---------------------------T------------CCGCATTA--TCCATCCAA-GCGTGCGTAA-----CT------CACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGTGTGGCATGCAGCAG------------CAGCAGCAGCAGCAGCAGCAGCGGCAACAGTAGTAGCAGCATC-------------------------------------------------------------------------------------------------------------------------------AAA-AAA----ATGG--AATGGCTTGCTCTCTCTGTCTCT--GTCTCTGTCCATAACTTAG--------------------------------------T----CA---------C--------------TGT------CTCTGTCTTACACACSizeHit CountTotal NormTotal
No Reads
droKik1
---------CGGG----GGCAACGGCGCCG---GGGGG---CGGAACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AAGATTGGTTC-----CGCAGAAACCCAGAATCTCTCAGAATCAGTA------------TCTCAGAA--TCCATCCAA-GTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGGCATGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGG-A----ATGG--AATGGCTTTTAGTCTCTCGCTCT--C-------------------------------------------------------------------------------------------------TCTCTCTCTCTCTTSizeHit CountTotal NormTotal
No Reads
droFic1
TGGACACAGGGCG----GGGC-CC---GCG---GGGGG---CGGTACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGT--CGCTTCCACACACACACACACACACACGCACACAA-----------CAAA-----AA--TCCATCCAA-GCGTGCGTAA-----TTTT----CACG--T--------------------------------GCCTCTTGTTTT------------T----------------------------------------------------------------------------------TGAATGTC----G----------------------TGTTGTATGTTGTA-------------------------------------------------------------CGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGATT---G----ATGG--AATGGCTTTTTGTCTTTGTCTCT--CTCA------------------------------------------------------------------CA------------------C------CTCTGTCTATCTCTGSizeHit CountTotal NormTotal
No Reads
droEle1
---------GGCG----GGGG-CG---GCG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGTTC-----CACC-------------------------------------AAA-----AA--TCCATCCAA-GCGTGCGTAT-----TG------CACATGT--------------------------------G------------T---------------------------------------------------------------------------T------GTTGTT-T---TGTATGCTGTAT------------------------GCTGTGTGCTGTGT---GCT---------------------------------------------------CTATGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------GCGAATGG-A----ATGG--AATGGCTTTTTGTCTTTGTCTCT--ATCT--CTA------------------------------------------T------CTCT--GTCTCTCAC-ACTG--------------------------TCGCTGTCSizeHit CountTotal NormTotal
No Reads
droRho1
---------GGCG----GGGG-CA---GCG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCGGTTC-----CACA--------------------------------------AA-----AA--TCCATCCAA-GCGTGCGTAA-----TG------CACAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT--GTTTTGTGTT------------------------------------------------------ATACGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGG-A----ATGG--AATGGCTTTTTGTCTTTGTCTCT--GT----------------------------------------------------------------CTCTCAC-TCTGTC----------------------GCTGTCTCTASizeHit CountTotal NormTotal
No Reads
droBia1
---------GGCG----GGCG-CG---GCG---GGGGG---CGGACCGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATGTCCGATC-----CACA--------------------------T------------CCG---CA--TCCATCCGC-GCGTGTGTCT----------------------TGTCGTCGTAATCGCCACCACCA---TTG------------T------------A--C-------------------------------------------------------CA---TT---GTTGTTGTTGTTCTTG----------G----------------------CGTTGCATGTTGCA-------------------------------------------------------------TGTTGTAGGTGGCATGCAGCAG------------CAGC-------------------------------------------------------------------------------------------------------------------------------------------------G-----------------GCGAAT---G----AAGG--AATGGCTTT-TGTCTCTGTCCC-------------------------------------------------------------------------------------------------------------CCCGCCSizeHit CountTotal NormTotal
No Reads
droTak1
---------GGCG----GGGG-CG---GCG---GGGGG---CGGACCGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCTGTTC-----CACA--------------------------------------TC-----CG--TCCATCCAA-GCGTGCATTA-----TT------CACG--TGTT-----------------------------------------------------------------------------------------------------------------GTTATT------GTTATTGT---TGTA---TGTAC---------------------------GTATGTTGTA-------------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAAC---G----ATGG--AATGGCTTTTTGTCTCTCTGACT--------------------------------------------------------------CT--GTCTCACAC-TCTGTC--------------------------GCTGTCSizeHit CountTotal NormTotal
No Reads
droEug1
---------GGCG----GGTG-CG---ACG---GGGGG---AGGAACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GTTAATATCCATTC-----AAAAAAAA--------------------------------AAAA-----GA--ACCATTCAA-GCGTATATTA-----TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTAT--TGA-------------------------------------------------------TGTTGTATGTGGCATGCAGCAG------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATA-TG----ATGG--AATGGCTTTTTGTCTTTGTCTTA--CCAC----------------A--------C-------------------ACT---------------------CTCTG-A----------G------CTCACTCTGTCTTTGSizeHit CountTotal NormTotal
No Reads
dm3
-----------CG----GGGG-CG---GCG---GGGGGCGGTGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCTGTTC-----CACC-----------------------------------------G---AG--TCCATCCAA-GCGTGCATTG-------------------TATTATTATT---ATTATTATTATTATTATTAT-----------T------------A--T-------------------------------------------------------TA---TT------GTTGTTGC---TGTACGCTGTACG----------------------AGATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGCTTTTTGTCTTTGTCTCT--CTCT----------------G--------C-------------------GCT---------------------CTCTATTATC------------------GTCTCTATCTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................GGGGGCGGTGGCACGATGCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GATGCTGGGGAATTTACCGTTGGG-C----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000001000
.................................................TGCTGGGGAATTTACCGTTGGG-C----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--.........................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACGATGCTGGGGAATTTACCGTTGGG-C----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000
...............................................GATGCTGGGGAATTTACCGTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000000000000000000000000000000
....................................................TGGGGAATTTACCGTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000000000000000
...................................................CTGGGGAATTTACCGTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000010000000000000000
.............................................ACGATGCTGGGGAATTTACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CG----GGGG-CG---GCG---GGGGGCGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GGTGGCACGATGCTGGGGAATTTACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGC...................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCG..........................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GGCACGATGCTGGGGAATTTACCGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
...................................................................................................................................................................................................................................TATTAT-----------T------------A--T-------------------------------------------------------TA---TT------GTTGTTGC---....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGATG----ATGG--AATGGC...................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TACG----------------------AGATGTATGTTGTGT---GT-------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................G---GGGGGCGGTGGCACGATGCTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTCTTTGTCTCT--CTCT----------------G--------C-------------------GCT---------------------C......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......................................GGTGGCACGATGCTGGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TGTACGCTGTACG----------------------AGATGTATG........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCTTTGTCTCT--CTCT----------------G--------C-------------------GCT---------------------C......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................................................................................................................GTACGCTGTACG----------------------AGATGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
..........................................GGCACGATGCTGGGGAATTTACCGTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--.........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TGTACG----------------------AGATGTATGTTGTGT---...............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATG----ATGG--AATGGCTTTTTGTCTTT........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................GGGG-CG---GCG---GGGGGCGGTGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GTTGTGT---GT-------------------------------------------------------TGTTGTATGTGG..........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGATG----ATGG--AATGGCTTTT...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GTACG----------------------AGATGTATGTTGTGT---GT-------------------------------------------------------TGTT..................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCTTTGTCTCT--CTCT----------------G--------C-------------------GC.............................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TGGCACGATGCTGGGGAATTTAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GCTGGGGAATTTACCGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................GGGG-CG---GCG---GGGGGCGGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CACGATGCTGGGGAATTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAA........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATG.............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..................................................GCTGGGGAATTTACCGTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................CTGGGGAATTTACCGTTGGG-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GATGTATGTTGTGT---GT-------------------------------------------------------TGTT..................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................ATCCAA-GCGTGCATTG-------------------TATTATTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................G-T----AA----------GT-AATATCTGTTC-----CACC-----------------------------------------G---AG--TCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTG...........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................GCTGGGGAATTTACCGTTGGG-C----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................GGTGGCACGATGCTGGGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................GTGGCACGATGCTGGGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
........................................GTGGCACGATGCTGGGGAATTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CG----GGGG-CG---GCG---GGGGGCGGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TGCTGGGGAATTTACCGTTGGG-C----T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........CG----GGGG-CG---GCG---GGGGGCGGTGGCCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TGGCACGATGCTGGGGAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CGGTGGCACGATGCTGGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GATGTATGTTGTGT---GT-------------------------------------------------------TGTTG.................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
................................................ATGCTGGGGAATTTACCGTTGGG-C----T..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GTTGGG-T----AA----------GT-AATATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------------------GCT---------------------CTCTATTATC------------------GTCTCTA....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGGGGAATTTACCGTTGGG-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................CGTTGGG-T----AA----------GT-AATATCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--A........................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................ACGATGCTGGGGAATTTACCGTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................T-AATATCTGTTC-----CACC-----------------------------------------G---AG--TC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................ATGCTGGGGAATTTACCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
....................................GGCGGTGGCACGATGCTGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...............................................GATGCTGGGGAATTTACCGTTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............G----GGGG-CG---GCG---GGGGGCGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGATG----ATGG--AATGGCTTTTTGT............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATG----ATGG--AATGGCTTTTTG.............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
................................................ATGCTGGGGAATTTACCGTTGGG-C----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............G----GGGG-CG---GCG---GGGGGCGGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.....................................GCGGTGGCACGATGCTGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................TTGTGT---GT-------------------------------------------------------TGTTGTATGTGGC.........................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGC...................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................TGGGGAATTTACCGTTGGG-C----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................GCGGTGGCACGATGCTGGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCTTTGTCTCT--CTCC----------------T--------...................................................................................2090.8980000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000101020000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TATTATTAT-----------T------------A--T-------------------------------------------------------TA---TT------GTTGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTCTTTGTCTCT--CTCG----------------............................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
---------GGCG----GGTG-CA---GCG---GGGGGCGGCGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCTGTTC-----CACC-----------------------------------------G---AG--TCCATCCAA-GCGTGCATTG-------------------TATTATTATT---ATTATTATTATTA---TTAT-----------T------------T--T-------------------------------------------------------TA---TT------GTTGTTGC---TGTACGTTGTACG----------------------AGATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGCTTT-TGTCTTTGTCTCT--CTGT----------------G--------C-------------------GCT---------------------CTCTGTCGCCGTCTCTCTCTCTATATATATATCTCTCTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGTCTCT--CTGT----------------G--------C-------------------GCT---------------------.......................................2111.00100100000000000000
.................................................................................................................................................................................................................................A---TTAT-----------T------------T--T-------------------------------------------------------TA---TT------GTTGTTGC---T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TGTCTTTGTCTCT--CTGT----------------G--------C-------------------G..............................................................2111.00100000000001000000
........................................................GAATTTACCGTTGGA-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000001000000000
..................................................................................................................................................................................................................................................................................................................................T------GTTGTTGC---TGTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1540.25100000000001000000
droSec2
---------GGCG----GGTG-CA---GCG---GGGGGCGGCGGCACGATGCTGGGGAATTTACCGATGGG-T----AA----------GT-AATATCTGTTC-----CACC-----------------------------------------G---AG--TCCATCCAA-GCGTGCATTG-------------------TATTATTATT---ATTATTATTATTATTTTT----------TTTT------------T--T-------------------------------------------------------TA---TT------GTTGTTGC---TGTACGTTGTACG----------------------AGATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGCTTT-TGTCTTTGTCTCT--CTCT----------------G--------C-------------------ACT---------------------CTCTGTCGCCGTCTCTCT------CTCTATATATATCTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................CGGCGGCACGATGCTGGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...........................................GCACGATGCTGGGGAATTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000
................................................ATGCTGGGGAATTTACCGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
...............................................GATGCTGGGGAATTTACCGATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
droYak3
---------GGCG----GGGG-CG---GCG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCTGTTC-----CACA-----------------------------------------G---CG--TTCATCCAA-GCGTGTATTG-------------------TATT-----------------------------------------------------------------------------------------------------------------ATTATTATTATTGTTGTTGC---TGTACGTTGTACGTTGTACGTTGTA----------CGATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGCTTTTTATCTTTGTCTCT--CTCTCTCACT---------CTAACTGT--C-------------------TGT------CTCT--GTCACACAC-TCTGTC----------------------GCTGTCTCTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................CGATGCTGGGGAATTTACCGTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...........................................................................................................................................................................................................................................................................................................................................TGTTGC---TGTACGTTGTACGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...................................................CTGGGGAATTTACCGTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
droEre2
---------GGCG----GGGG-CG---GCG---GGGGG---CGGCACGATGCTGGGGAATTTACCGTTGGG-T----AA----------GT-AATATCTGTTC-----CATC-----------------------------------------G---AG--TCCATCCAA-GCGTGCATTG-------------------TATT-----------------------------------------------------------------------------------------------------------------ATTATT------GTTGTTGC---TGTACGTTGTAC------------------------GATGTATGTTGTGT---GT-------------------------------------------------------TGTTGTATGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGATG----ATGG--AATGGCTTTTTGTCTTTGTCTCT--CT------------------G--------C-------------------GCT---------------------C--------------TCT------CTCTCTCTCTCTCTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................TGGGGAATTTACCGTTGGG-T----A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.........................................................................................GT-AATATCTGTTC-----CATC-----------------------------------------G---AG--TC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTTTGTCTTTGTCTCT--CT------------------G--------C-------------------GC.............................................................2511.0010000010
...............................................GATGCTGGGGAATTTACCGTTGGG-T----AA----------G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
............................................CACGATGCTGGGGAATTTACCGTTGGG-T----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.............................G---GGGGG---CGGCACGATGCTGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGCATGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAATGAT....................................................................................................................................................2311.0011000000
...............................................GATGCTGGGGAATTTACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
....................G-CG---GCG---GGGGG---CGGCACGATGCTGGGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
.............................................ACGATGCTGGGGAATTTACCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100

Generated: 05/18/2015 at 05:28 AM