ID:

dps_2712

 Coordinate:

XL_group1e:6063719-6063869 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.2 -17.1 -17.1

Flybase annnotation

exon [dpse_GLEANR_342:1]; CDS [Dpse\GA26370-cds]; intron [Dpse\GA26370-in]

No Repeatable elements found

Sense Strand Reads

----------------------------------################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TAGTATATATAAAACACACACACACAAAGGATACATGGATTACCGCTGCGGTCTAATTTTATACCCACACACACACACAATACACAAAGGTTTAATGGAAAAGGAAGCCGCGTATTAAGGGGACAAAAGCAGTAAATTTGGAGGAGCCGCCGATGGATGGAACTCAAATTAGATATCTATATATTTGCTGATTAATTTATATAAATCAATTTACGAATTATAGCCAACGCACACACACACACACACACACA
**************************************************(((((((((....(((............(((((.....(((((...........)))))..)))))...))).......(((.....)))(((...(((((...)).)))..))))))))))))...........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 M059
embryo
 M062
head
 V112
male body
...................................................................................................................................................................................................................TACGAATTATAGCCAACGCACACACA.............. 26 0 1 2.00 2 2 0 0 0 0
...............................TACATGGATTACCGTTGCGGTCTAAT.................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 0 1
.............................GATACATGGATTACCGTTGCG......................................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
............................GGATACATGGATTACCGTTGCG......................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0
................CACACACACAAAGGATACA........................................................................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0
..............................ATACATGGATTACCGCTGCG......................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................GGAGCCGCCGATGGATGGAACT....................................................................................... 22 0 1 1.00 1 0 0 1 0 0
..........................AAGGATACATGGATTACCGT............................................................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................TTACGAATTATAGCCAACGCA.................... 21 0 1 1.00 1 1 0 0 0 0
................CACACACACAAAGGATACATG...................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................ATTTGGAGGAGCCGCCGATGGATGGAA......................................................................................... 27 0 1 1.00 1 0 0 0 1 0

Anti-sense strand reads

ATCATATATATTTTGTGTGTGTGTGTTTCCTATGTACCTAATGGCGACGCCAGATTAAAATATGGGTGTGTGTGTGTGTTATGTGTTTCCAAATTACCTTTTCCTTCGGCGCATAATTCCCCTGTTTTCGTCATTTAAACCTCCTCGGCGGCTACCTACCTTGAGTTTAATCTATAGATATATAAACGACTAATTAAATATATTTAGTTAAATGCTTAATATCGGTTGCGTGTGTGTGTGTGTGTGTGTGT
**************************************************(((((((((....(((............(((((.....(((((...........)))))..)))))...))).......(((.....)))(((...(((((...)).)))..))))))))))))...........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM444067
head
........................GTTTCCTATGTACCTAATGGC.............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0
.....................................................................................................................................................GGCTATCTAGCTTGAGTTTG.................................................................................. 20 3 5 0.20 1 1 0 0
...........................................................................................................................................GCTACTCGGCGGCTACCT.............................................................................................. 18 2 8 0.13 1 1 0 0
..............................................................................................................................................................................................................................CGGTTGCGTGTATGTGTGT.......... 19 1 19 0.05 1 0 0 1
..............................................................................................................................................................................................................................CGGTTGCGTGTATGTGTGTG......... 20 1 19 0.05 1 0 1 0
...............................................................................................................................................................................................................................GGTTGCGTGTATGTGTGTGT........ 20 1 20 0.05 1 0 1 0
...............................................................................................................................................................................................................................GGTTGCGTGTGTGTGCGTGTG....... 21 1 20 0.05 1 0 1 0
.................................................................GTGTATGTGTGTGTTATGT....................................................................................................................................................................... 19 1 20 0.05 1 1 0 0
.......................................................AAAAAAATGGGTGCGTGTGTGTGT............................................................................................................................................................................ 24 3 20 0.05 1 1 0 0
................................................................................................................................................................................................................................GTTGCGTGTGTGTGTGTGTGT...... 21 0 20 0.05 1 0 1 0
...............................................................................................................................................................................................................................GGTTGCGTGTGTGCGTGTG......... 19 1 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1e:6063669-6063919 - dps_2712 TAGTATATATAAAACACACACA--CAC--A-------------------------------------------------------AAGGATACATGGATTACCGCTGCGGTCTAATTTTATACCCACA--------------CA----CACACACAATACACAAAGGTT--TAATGGAAAAGGAA------GCC----------------------------------------GCGTATTAAGGGGACAAAAGCAG------------------------------T--------------------------------------------------------------AA-A---------T-----------------------TTGGA-------GGAGCCGCC-----GATGGATGGAACTCAAA-TTAGATATCTA----TATATTTG-CTGATTAATTT------------AT--AT-AAATCAATTTACGAATTATAGCCAACGC------ACACACACACAC-----------A------CACACACA---
droPer2 scaffold_21:1022251-1022511 - TAGTATATATAAAACACACACA--CACACA----------CACA-----------------------------------------AAGGATACATGGATTACCGTTGCGGTCTAATTTTATACACACA--------------------CACACACAATACACAAAGGTT--TAATGGAAAAGGAA------ACC----------------------------------------GCGTATTAAGGTTACAAAAGCAG------------------------------T--------------------------------------------------------------AA-A---------T-----------------------TTGGA-------GGAGCCGCC-----GATGGATGGAACTCAAA-TTAGATATCTA----TATATTTG-CTGATTAATTT------------AT--AT-AAATCAATTTACGAATTATAGCCAACGCACACACACACACACACAC-----------A------AACACACA---
droWil2 scf2_1100000004963:3165236-3165480 + ATGTAAAACA------CCTACA--CACACA------CACAT------ACAAAAAC------AC---------ACTCAC----AC-ACACACACACACAAAACC--AGAG----------------------------------------------------------------------------------------------------------------------------------------------ATCCAGTTTAATAGGCTTATTG-----------------------A----------------------------ACTGGAT-TCAAAAGAAACCAAAATGA----------AA-----------------------AGGATTTAAT--CGAACTGGTTTACACAATTGTTCAACTTTTTTTTTGTCATTTT----TAAATTTG-CAATTCAAATT------------TCAAAT-TTGGCATTTTTCAAATCTATACCTACAC------ACACGCACACAC-----------A------CACACACA---
droVir3 scaffold_12823:2080005-2080234 - CTAGTTAAATT-----CCCACACACACACA--------C------------------------------------------------ACACAGAGAGACTTGAGCATCGTTATAATTTTGCATGCAGG--CGA------ATAC-------------------AAAA-------------------------------------------------------------------------------------GCCTGACGTGAGAAGCAAATTT---------------------------------------------------GCCTTTGTG-TGTGAGAGACTAAA----------TTGAAATTCTATGCAAAACTTAATCAAAAATTGTTTAGC--AATGCACAA-----GCAGAGCACAGCACAAA-CAACAAC-------------------------------------------------------------AACAACACATACAC------ACACACACACAC-----------A------CACACACT---
droMoj3 scaffold_6496:13047410-13047631 + TAATAATTATAG-ATACACACATACAC--A--------CATACGCATACAAACAC-----CAC---------ACTC------AC-ACACATACATATATAATTTTCACACATTGAGTTTAACA-----------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------GATTTCGAG-AGTGGAAAACCTAA----------CCAAAA--CCAAACA----------------------------------A-----AACGAAATGAAATGAAA-TGAGTAAAATG----TACGTTTAAGAAATTAGCCT------------AA--GT-AGACGAATGCTCCAAATGAA-----CAC----------ACACAC--ACAC-------A------GAC-GACA---
droGri2 scaffold_14906:5632754-5633002 - TAATACACATAAAACACACACA--CATACA------CACAC------------AGAAATGCACATA----------------------TTTA--------------------TATGTTTATATATATATATATATATATAGATATATATACACACTATTC-------------------------------------------------------------------------------------AAACACGTTAAATAGCA----------------------------------TTATG-TTGAGCCTAAAGAAATGGATTTGTTTGTGTAATGCGA---------GCGT-TTTCAGTG-AA-----------------------AACTTCAGGT---GATTTGAC-----AA--AATGGTGTCCAAA-TAAGGTAAATA--------------------------------------------------------TTTTAC--TACACAC------ACACACACACAC-----------A------CACACACA---
droAna3 scaffold_13047:1169482-1169767 - TAGTTTGTAGATAA-ACACACACAGA------------CAC------------AC-AACCCATAAAG-------------------AACATACATGGATTACCGTTGCGGTCTAATTTTATAAAAAAA-A---------A--------------------AAAAAGGTAAATAATTAAAAGATAACAATACACC----------------------------------------TCGTATTG--GAGACAAATCGAAT-----------------AAA---------TAAT--AACAAAT------------------------------AA-ACTAA---------ATTAAAT---------G-----------------------ATA---ACACAAAGAGCTGGA-----GATGAGATCAACTTAAA-TTAGATA-CTA----TATATTTG-CTGATTAATTT------------AT--AT-AAACCAATTTACGATTTATAGCCAACGC------------------ACAC------TGAGAGAAAATATGCA---
droBip1 scf7180000396575:236794-237104 + TAGTTTGTAGATA---CACACACACAC--A--------CAGACACAGACAC--AC-AACCCATTAAAA--------------AC-ATACATACATGGATTACCGTTGCGGTCTAATTTTATAAAAAAA--------------------------------TAAAAGGTATATAATTAAAAGAGAACAATACACC----------------------------------------TCGTATTG--GAGACAAATCGAATTGCAACGGCAAATAAATAAA---------TAATTTAAAAAGT------------------------------AA-ACTAA---------ATTAA-C---------G-----------------------ATAAACACACAAAGAGCTGGA-----GATGAGATCAACTTAAA-TTAGATAACTA----TATATTTG-CTGATTAATTT------------AT--AT-AAACCAATTTACGATTTATAGCCAACGC------------------ACAC------TG---------AAACA---
droKik1 scf7180000302798:265357-265651 + TTGTATGTAGATAATACACACAAA-ACACA--------CAC----------------ACACATAC-------AT--------GC-ATACATACATGGATTACCGATGCGGTCTAATTTTATATACAAA--CAC------GAACA----CA----------------------------------------CACC---CAACACATATTTACAATACATAAACTATGTTTTTTTTCCGTATTGAAGCGACAAATCGAATTGCAAAGGCAAATAAATAAATCAAATAAATAAATAGAAAAGT--------------------------------------------------GA-A---------G-----------------------A-----ACGC---TAGCTGGG-----GAT---------------------AACTCTA--AATATTTG-CTGATGAATTTCAATTGAAAACTAA--GTAAAACCAATTTAC--------------GC------------------ACAG--AC---GA---AA----AGCA---
droFic1 scf7180000453872:104741-105021 + TAGCATGTAGATAATACACACACAAAC--A--------CAC------------ACGAACCCAT-------------------AC-AAGCATACATGGATTACCGTTGCGGTCAAATTTTATACACGAA------------AACA----CA---------------------------------------------CACA---C-----------------------------------------AAGACAAATCGAATTGCAAAGGCAAA-AAACAAA---------TAAATAAGGAAGCG------------AG----------AGCGGAA-GCGGA---------AGTGA-CG-----A-AG-----------------------AAGAAGAAGC--AGAGCTGGG-----GATGAGATCAACTCAAA-TTAGATAACTA----TATATTTG-CTGATTAATTT------------AT--AT-AAACCAATTTACGATTTATAGCCAACGC------------------ACAG--AT---A------AACAAACA---
droEle1 scf7180000491193:428302-428569 - TAGTATGTAGATAATACACACACACAC--A--------CACACAC--ACAA--ACGAACCCAT-------------------AC-AAGCAAACATGGATTACCGTTGCAGTCTAATTTTATACACACA-ACAC------AAACA----CA---------------------------------------------CACA---C-----------------------------------------AAGACAAATCGAATTGCAAAGGCAAATAAATAAA---------TAAATAAGGAAG-----------------------------------CGGA---------AGTGA-A---------G-----------------------AAGAAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-TTAGATAACTA----TACATTTG-CTGATTAATTT------------AT--AT-AAACCAATCTACGATTTATAGCCAACGC------------------ACA--------------------------
droRho1 scf7180000779986:296902-297165 + TAGGATGTAGATAATACACATACAAAC--A--------CAC------------ACGAACCCAT-------------------AC-AAGCATACATGGATTACCGTTGCGGTCTACTTTTATACACACA-AC----------ACA----CA---------------------------------------------CACA---C-----------------------------------------AAGACAAATCGAATTGCAAAGGCAAATAAATAAA---------T----AAGGAAG----------------------------CGGAA-GCGGA---------AGTAA-AG--AAGA-AG-----------------------AAGATGAAGC--AGAGCTGGA-----GATGAGAGCAACTCAAA-TTAGATAACTA----TACATTTG-CTGATTAATTT------------AT--AT-AAACCAATCTACGATTTATAGCCAACGC------------------ACA--------------------------
droBia1 scf7180000301760:377803-378074 + TAGTATGTAGATAATACACA----------------------------------CGAACCCAT-------------------TC-AAGCATACATGGATTACCGATGCGGTCTAATTTTATACACACA-A---------AAACACACACA---------------------------------------------CCCA---C-----------------------------------------AAGACAATTCGAATTGCAAAGGCAAATAAATAAA---------TGAATAAGGAAG----------------------------CGGAA-GCGGA---------AGTGG-CG--AGGA-AG-----------------------AGGAAGAGGC--AGAGCTGGA-----GATGAGATCAACTCAAA-TTAGCTAACTAAACATGTATTTG-CTGATTAATTT------------AT--GT-AAACCAATCTACGATTTGTAGCCAACGC------------------ACAG--AA--------------AGCA---
droTak1 scf7180000415843:253263-253580 + TAGTATGTAGATAAAACACACACACAC--A--------CATACAC--ACGAACACGAACCCAT-------------------AC-AAGCATACATGGATTACCGTTGCGGTCTAATTTTATACACACA-A------------------------------------------------------------------ACA---C-----------------------------------------AAGACAAATCGAATTGCAAAGGCAAATAAATATT---------TAAATAAGAAAGCG-ATGAAGAAGAAGAAGCAGA----AGCGGAA-ACGGA---------AGTGA-CGCCAAGA-AG-----------------------AAGAAGAAGC---GAGCTGGA-----GATGAGATCAACTCAAA-CTAGATAACTATACATATATTTG-CTGATTAATTTATATTT------AT--AT-AAACCAATCTACGATTTATAGCCAACGC------------------ACAG--AA--------AAAACAAACA---
droEug1 scf7180000408176:468869-469183 + TAGTATGTAGATAATACAAACACACATACA------CACAC------------ACGAACCCAT-------------------AC-AAACATACATGGATTACCGTTGCGGTCTAATTTTATACACATACATAC------AAACA-------------------------------------------CCACACCACACA---C-----------------------------------------AAGACAAATCGAATTGCAAAGGCAAATAAATAAA---------TGAATAAGGAAGAGGATGTAGAAGCGAAAGCGAA----AGCGAAA-GCGGA---------------------------------------------------CAAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-TTAGATAACTATACATATATTTG-CTGATTAATTT------------AT--AT-AAACCAATTTACGATTTATAGCCAACGC------------------ACAGTAAA-AAGA---AAAAGAAAAA---
dm3 chrX:11301768-11302035 + TAGTATGTAGATAATACACACA--------------AACAC------------ACGAACCCATAAATAACACACACACACACAC-ACACACAAATGGACTACCGTTGCGGTCTAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCA------AATAAATAAA---------TAATTAAGAAAGT--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-CTAGATAACTATACATATATTTG-CTGATTAATTT------------AT--GT-AAACCAATATACGATTTATAGCCAACGC------------------ACAG--AAAATGA---AAAACAAAAA---
droSim2 x:10729641-10729917 + TAGTATGTAGATAATACACACATACAC--A----CAAACAC------------ACAAACCCATAAATAACACAC--------AC-ACACACACATGGACTACCGTTGCGGTCAAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCAAAAGCAAATAAATAAA---------TAATTAAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGGAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-CTAGATAACTATACATATATTTG-CTGATTAATTT------------AT--GT-AAACCAATATACGATTTATAGCCAACGC------------------ACAG--AAAATGA---AAAACAAAAAAAC
droSec2 scaffold_36:24953-25218 + TAGTATGTAGATAATACACACATACAC--A------AACAC------------ACAAACCCATAAATAACATAC--------AC-ACACACAAATGGACTACCGCTGCGGTCTAATTATATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCAAAAGCAAATAAATAAA---------TAATTAAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGGAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-CTAGATAACTATACATATATTTG-CTGATTAATTT------------AT--GT-AAACCAATATACGATTTATAGCCAACGC------------------ACAG--AAAATGT---------AAAA---
droYak3 X:10851369-10851641 - TAGTATGTAGATAATACACACACAAAAACA----CAAACAC------------ACGAGCCCAT-------------------ACTAAACACACATGGACTACCGTTGCGGTCTAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCATATGCAAATAAATAAAT-AACTAAATAATTAAGGAAGG--------------------------------------------------GA-C---------G-----------------------ATGAAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-TTAGATAACTAAACATATATTTG-CTGATTAATTT------------AT--GT-AAACCAATATACGATTTATAGCCAACGC------------------ACAG--AA-ATGA---AAAACAAAAA---
droEre2 scaffold_4690:3853030-3853298 - TAGTATGTAGATAATACACACACACACCAACACACAAACAC------------ACGAGCCCAT-------------------AC-AAACACACATGGACTACCGTTGCGGTCTAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCAAATGCAAATAAATAAA---------TAATTAAGGAAGG--------------------------------------------------GA-C---------G-----------------------ATGGAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-CTAGATAACTATACATATATTTG-CTGTTTAATTT------------AT--GT-AAACCAATATACGATTTATAGCCAACGC------------------ACAG--AA-ATGA---AAAACAAAAA--C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TAGTATATATAAAACACACACA--CAC--A-------------------------------------------------------AAGGATACATGGATTACCGCTGCGGTCTAATTTTATACCCACA--------------CA----CACACACAATACACAAAGGTT--TAATGGAAAAGGAA------GCC----------------------------------------GCGTATTAAGGGGACAAAAGCAG------------------------------T--------------------------------------------------------------AA-A---------T-----------------------TTGGA-------GGAGCCGCC-----GATGGATGGAACTCAAA-TTAGATATCTA----TATATTTG-CTGATTAATTT------------AT--AT-AAATCAATTTACGAATTATAGCCAACGC------ACACACACACAC-----------A------CACACACA---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAATTATAGCCAACGC------ACACACA..................................2612.0020200000000
................CACACA--CAC--A-------------------------------------------------------AAGGATACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.........................................................................................ATACATGGATTACCGCTGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GGAGCCGCC-----GATGGATGGAACT......................................................................................................................................2211.0010010000000
.....................................................................................AAGGATACATGGATTACCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGAATTATAGCCAACGC------A........................................2111.0010100000000
................CACACA--CAC--A-------------------------------------------------------AAGGATACATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................A---------T-----------------------TTGGA-------GGAGCCGCC-----GATGGATGGAA........................................................................................................................................2711.0010001000000
droPer2
TAGTATATATAAAACACACACA--CACACA----------CACA-----------------------------------------AAGGATACATGGATTACCGTTGCGGTCTAATTTTATACACACA--------------------CACACACAATACACAAAGGTT--TAATGGAAAAGGAA------ACC----------------------------------------GCGTATTAAGGTTACAAAAGCAG------------------------------T--------------------------------------------------------------AA-A---------T-----------------------TTGGA-------GGAGCCGCC-----GATGGATGGAACTCAAA-TTAGATATCTA----TATATTTG-CTGATTAATTT------------AT--AT-AAATCAATTTACGAATTATAGCCAACGCACACACACACACACACAC-----------A------AACACACA---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCC-----GATGGATGGAACTCAA...................................................................................................................................2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................GA-------GGAGCCGCC-----GATGGATGGAACT......................................................................................................................................2411.001100000
...........................................................................................................................................................................................................................................................................................................................................................................T-----------------------TTGGA-------GGAGCCGCC-----GATGGATGGAAC.......................................................................................................................................2711.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................CGCC-----GATGGATGGAACTCAAA-TTAG.............................................................................................................................2511.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................GA-------GGAGCCGCC-----GATGGATGGAACC......................................................................................................................................2411.001100000
..........................................................................................................................................................CAATACACAAAGGTT--TAATGGAAAAGG.........................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCC-----GATGGATGGAACTCAAA-TTAGAT...........................................................................................................................2911.001100000
droWil2
ATGTAAAACA------CCTACA--CACACA------CACAT------ACAAAAAC------AC---------ACTCAC----AC-ACACACACACACAAAACC--AGAG----------------------------------------------------------------------------------------------------------------------------------------------ATCCAGTTTAATAGGCTTATTG-----------------------A----------------------------ACTGGAT-TCAAAAGAAACCAAAATGA----------AA-----------------------AGGATTTAAT--CGAACTGGTTTACACAATTGTTCAACTTTTTTTTTGTCATTTT----TAAATTTG-CAATTCAAATT------------TCAAAT-TTGGCATTTTTCAAATCTATACCTACAC------ACACGCACACAC-----------A------CACACACA---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................AAATGA----------AA-----------------------AGGATTTAAT--CGAACT...........................................................................................................................................................2412.00220000
droVir3
CTAGTTAAATT-----CCCACACACACACA--------C------------------------------------------------ACACAGAGAGACTTGAGCATCGTTATAATTTTGCATGCAGG--CGA------ATAC-------------------AAAA-------------------------------------------------------------------------------------GCCTGACGTGAGAAGCAAATTT---------------------------------------------------GCCTTTGTG-TGTGAGAGACTAAA----------TTGAAATTCTATGCAAAACTTAATCAAAAATTGTTTAGC--AATGCACAA-----GCAGAGCACAGCACAAA-CAACAAC-------------------------------------------------------------AACAACACATACAC------ACACACACACAC-----------A------CACACACT---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TAATAATTATAG-ATACACACATACAC--A--------CATACGCATACAAACAC-----CAC---------ACTC------AC-ACACATACATATATAATTTTCACACATTGAGTTTAACA-----------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------GATTTCGAG-AGTGGAAAACCTAA----------CCAAAA--CCAAACA----------------------------------A-----AACGAAATGAAATGAAA-TGAGTAAAATG----TACGTTTAAGAAATTAGCCT------------AA--GT-AGACGAATGCTCCAAATGAA-----CAC----------ACACAC--ACAC-------A------GAC-GACA---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................ACATACAC--A--------CATACGCATACAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................GAGTTTAACA-----------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------GATTTCGAG-AGTGGA............................................................................................................................................................................................................................2611.001000001
.....................................................................................................................................................................................................................................................................................................................................ATTTCGAG-AGTGGAAAACC.......................................................................................................................................................................................................................1911.001000010
...................................................................................................................GTTTAACA-----------------------------------------------------------------------------------------------------------------------------------------------------A---------------------------------------------------GATTTCGAG-AGTGGAA...........................................................................................................................................................................................................................2511.001000001
......................................................C-----CAC---------ACTC------AC-ACACATACATATATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.........................................ACGCATACAAACAC-----CAC---------ACTC------AC-ACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................ATACAC--A--------CATACGCATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.131100000
droGri2
TAATACACATAAAACACACACA--CATACA------CACAC------------AGAAATGCACATA----------------------TTTA--------------------TATGTTTATATATATATATATATATATAGATATATATACACACTATTC-------------------------------------------------------------------------------------AAACACGTTAAATAGCA----------------------------------TTATG-TTGAGCCTAAAGAAATGGATTTGTTTGTGTAATGCGA---------GCGT-TTTCAGTG-AA-----------------------AACTTCAGGT---GATTTGAC-----AA--AATGGTGTCCAAA-TAAGGTAAATA--------------------------------------------------------TTTTAC--TACACAC------ACACACACACAC-----------A------CACACACA---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................GCGA---------GCGT-TTTCAGTG-AA-----------------------.............................................................................................................................................................................1811.00110
........................................................................................................................................................CACTATTC-------------------------------------------------------------------------------------AAACACGTTAAATA.............................................................................................................................................................................................................................................................................................................2211.00110
..............................................................................................................................................................................................................................................................................................................TTGAGCCTAAAGAAATGGATTT............................................................................................................................................................................................................................................2211.00110
...........................................................................................................................................................................................................................................................................................................................................TAATGCGA---------GCGT-TTTCAGT........................................................................................................................................................................................................1911.00110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAC--TACACAC------ACACACACACA..............................22110.09110
droAna3
TAGTTTGTAGATAA-ACACACACAGA------------CAC------------AC-AACCCATAAAG-------------------AACATACATGGATTACCGTTGCGGTCTAATTTTATAAAAAAA-A---------A--------------------AAAAAGGTAAATAATTAAAAGATAACAATACACC----------------------------------------TCGTATTG--GAGACAAATCGAAT-----------------AAA---------TAAT--AACAAAT------------------------------AA-ACTAA---------ATTAAAT---------G-----------------------ATA---ACACAAAGAGCTGGA-----GATGAGATCAACTTAAA-TTAGATA-CTA----TATATTTG-CTGATTAATTT------------AT--AT-AAACCAATTTACGATTTATAGCCAACGC------------------ACAC------TGAGAGAAAATATGCA---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................AAGAGCTGGA-----GATGAGATCAACT......................................................................................................................................2312.002000002
...........................................................................................................................................................................................................................................................................................................................................................................G-----------------------ATA---ACACAAAGAGCTGGA-----GATGAGAT...........................................................................................................................................2711.001010000
...........................................................................................................................................................................................................................................................................................................................................................................G-----------------------ATA---ACACAAAGAGCTGGA-----G..................................................................................................................................................2011.001010000
...........................................................................................................................................................................................ATACACC----------------------------------------TCGTATTG--GAGAC.......................................................................................................................................................................................................................................................................................................................2011.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTACGATTTATAGCCAACGC------------------ACAC------T..................2711.001010000
...........................................................................................................................................................................................ATACACC----------------------------------------TCGTATTG--GAGA........................................................................................................................................................................................................................................................................................................................1911.001001000
.......................................................................................ACATACATGGATTACCGTTGCGGTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGAGCTGGA-----GATGAC.............................................................................................................................................1911.001010000
..............................................................................................................................................................................................CACC----------------------------------------TCGTATTG--GAGACAAATCGAAT-----------------.............................................................................................................................................................................................................................................................................................2611.001100000
.............................................................................................................................................................................................ACACC----------------------------------------TCGTATTG--GAGACA......................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................................................G-----------------------ATA---ACACAAAGAGCTGGA-----...................................................................................................................................................1911.001001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATA-CTA----TATATTTG-CC.......................................................................................................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA-CTA----TATATTTG-CTGATTAATT...............................................................................................2411.001010000
................CACACACAGA------------CAC------------AC-AACCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
droBip1
TAGTTTGTAGATA---CACACACACAC--A--------CAGACACAGACAC--AC-AACCCATTAAAA--------------AC-ATACATACATGGATTACCGTTGCGGTCTAATTTTATAAAAAAA--------------------------------TAAAAGGTATATAATTAAAAGAGAACAATACACC----------------------------------------TCGTATTG--GAGACAAATCGAATTGCAACGGCAAATAAATAAA---------TAATTTAAAAAGT------------------------------AA-ACTAA---------ATTAA-C---------G-----------------------ATAAACACACAAAGAGCTGGA-----GATGAGATCAACTTAAA-TTAGATAACTA----TATATTTG-CTGATTAATTT------------AT--AT-AAACCAATTTACGATTTATAGCCAACGC------------------ACAC------TG---------AAACA---SizeHit CountTotal NormTotal
No Reads
droKik1
TTGTATGTAGATAATACACACAAA-ACACA--------CAC----------------ACACATAC-------AT--------GC-ATACATACATGGATTACCGATGCGGTCTAATTTTATATACAAA--CAC------GAACA----CA----------------------------------------CACC---CAACACATATTTACAATACATAAACTATGTTTTTTTTCCGTATTGAAGCGACAAATCGAATTGCAAAGGCAAATAAATAAATCAAATAAATAAATAGAAAAGT--------------------------------------------------GA-A---------G-----------------------A-----ACGC---TAGCTGGG-----GAT---------------------AACTCTA--AATATTTG-CTGATGAATTTCAATTGAAAACTAA--GTAAAACCAATTTAC--------------GC------------------ACAG--AC---GA---AA----AGCA---SizeHit CountTotal NormTotal
No Reads
droFic1
TAGCATGTAGATAATACACACACAAAC--A--------CAC------------ACGAACCCAT-------------------AC-AAGCATACATGGATTACCGTTGCGGTCAAATTTTATACACGAA------------AACA----CA---------------------------------------------CACA---C-----------------------------------------AAGACAAATCGAATTGCAAAGGCAAA-AAACAAA---------TAAATAAGGAAGCG------------AG----------AGCGGAA-GCGGA---------AGTGA-CG-----A-AG-----------------------AAGAAGAAGC--AGAGCTGGG-----GATGAGATCAACTCAAA-TTAGATAACTA----TATATTTG-CTGATTAATTT------------AT--AT-AAACCAATTTACGATTTATAGCCAACGC------------------ACAG--AT---A------AACAAACA---SizeHit CountTotal NormTotal
No Reads
droEle1
TAGTATGTAGATAATACACACACACAC--A--------CACACAC--ACAA--ACGAACCCAT-------------------AC-AAGCAAACATGGATTACCGTTGCAGTCTAATTTTATACACACA-ACAC------AAACA----CA---------------------------------------------CACA---C-----------------------------------------AAGACAAATCGAATTGCAAAGGCAAATAAATAAA---------TAAATAAGGAAG-----------------------------------CGGA---------AGTGA-A---------G-----------------------AAGAAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-TTAGATAACTA----TACATTTG-CTGATTAATTT------------AT--AT-AAACCAATCTACGATTTATAGCCAACGC------------------ACA--------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TAGGATGTAGATAATACACATACAAAC--A--------CAC------------ACGAACCCAT-------------------AC-AAGCATACATGGATTACCGTTGCGGTCTACTTTTATACACACA-AC----------ACA----CA---------------------------------------------CACA---C-----------------------------------------AAGACAAATCGAATTGCAAAGGCAAATAAATAAA---------T----AAGGAAG----------------------------CGGAA-GCGGA---------AGTAA-AG--AAGA-AG-----------------------AAGATGAAGC--AGAGCTGGA-----GATGAGAGCAACTCAAA-TTAGATAACTA----TACATTTG-CTGATTAATTT------------AT--AT-AAACCAATCTACGATTTATAGCCAACGC------------------ACA--------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TAGTATGTAGATAATACACA----------------------------------CGAACCCAT-------------------TC-AAGCATACATGGATTACCGATGCGGTCTAATTTTATACACACA-A---------AAACACACACA---------------------------------------------CCCA---C-----------------------------------------AAGACAATTCGAATTGCAAAGGCAAATAAATAAA---------TGAATAAGGAAG----------------------------CGGAA-GCGGA---------AGTGG-CG--AGGA-AG-----------------------AGGAAGAGGC--AGAGCTGGA-----GATGAGATCAACTCAAA-TTAGCTAACTAAACATGTATTTG-CTGATTAATTT------------AT--GT-AAACCAATCTACGATTTGTAGCCAACGC------------------ACAG--AA--------------AGCA---SizeHit CountTotal NormTotal
No Reads
droTak1
TAGTATGTAGATAAAACACACACACAC--A--------CATACAC--ACGAACACGAACCCAT-------------------AC-AAGCATACATGGATTACCGTTGCGGTCTAATTTTATACACACA-A------------------------------------------------------------------ACA---C-----------------------------------------AAGACAAATCGAATTGCAAAGGCAAATAAATATT---------TAAATAAGAAAGCG-ATGAAGAAGAAGAAGCAGA----AGCGGAA-ACGGA---------AGTGA-CGCCAAGA-AG-----------------------AAGAAGAAGC---GAGCTGGA-----GATGAGATCAACTCAAA-CTAGATAACTATACATATATTTG-CTGATTAATTTATATTT------AT--AT-AAACCAATCTACGATTTATAGCCAACGC------------------ACAG--AA--------AAAACAAACA---SizeHit CountTotal NormTotal
No Reads
droEug1
TAGTATGTAGATAATACAAACACACATACA------CACAC------------ACGAACCCAT-------------------AC-AAACATACATGGATTACCGTTGCGGTCTAATTTTATACACATACATAC------AAACA-------------------------------------------CCACACCACACA---C-----------------------------------------AAGACAAATCGAATTGCAAAGGCAAATAAATAAA---------TGAATAAGGAAGAGGATGTAGAAGCGAAAGCGAA----AGCGAAA-GCGGA---------------------------------------------------CAAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-TTAGATAACTATACATATATTTG-CTGATTAATTT------------AT--AT-AAACCAATTTACGATTTATAGCCAACGC------------------ACAGTAAA-AAGA---AAAAGAAAAA---SizeHit CountTotal NormTotal
No Reads
dm3
TAGTATGTAGATAATACACACA--------------AACAC------------ACGAACCCATAAATAACACACACACACACAC-ACACACAAATGGACTACCGTTGCGGTCTAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCA------AATAAATAAA---------TAATTAAGAAAGT--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-CTAGATAACTATACATATATTTG-CTGATTAATTT------------AT--GT-AAACCAATATACGATTTATAGCCAACGC------------------ACAG--AAAATGA---AAAACAAAAA---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................TTAAGAAAGT--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--AGA..............................................................................................................................................................27121.002100000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030500000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAAGC--AGAGCTGGA-----GATGAGA............................................................................................................................................25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100110000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000010400000
...........................................................................................................................................................................................................................................................................................................T--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--AGAGCTGGA-----GA.................................................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000002000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000300000
........................................................................................................................TACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCA------AA..................................................................................................................................................................................................................................................................................................2718.0080000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000
..................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGA-----GATGAGATCAACTCAAA-CTAGA............................................................................................................................2815.0050000000000000000000000000000000000000000000000000000000000000000000000000000020030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AAGAAAGT--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--AGA..............................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATAGCCAACGC------------------ACAG--AA.....................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................AAGT--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--AGAGC............................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................T--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--AGAGCTGGA-----GAT................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000
..................CACA--------------AACAC------------ACGAACCCATAAATAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ACAAATCGAATTGCA------AATAAATAAA---------T................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TAAGAAAGT--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--AGA..............................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
.............................................................................CACACAC-ACACACAAATGGACTACCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACGATTTATAGCCAACGC------------------ACAG--AA.....................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTT------------AT--GT-AAACCAATATACGAT............................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CACAC-ACACACAAATGGACTACCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..................................................................................................................................................................................................................................................................................TAAA---------TAATTAAGAAAGT--------------------------------------------------GA-C---------A-----------------------ATGGA........................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
................................................................................................................TAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAA...............................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAAGC--AGAGCTGGA-----GATGAGA............................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCAACGC------------------ACAG--AAA....................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TGCGGTCTAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGA........................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGC...........................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................AAGT--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--AGAGCTGGA-----...................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
..............TACACACA--------------AACAC------------ACGAACCCATAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGATCAACTCAAA-CTAGATAAC........................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................CAC-ACACACAAATGGACTACCGTTGCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................A-C---------A-----------------------ATGGAGAAGC--AGAGCTGGA-----GA.................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
..........................................................................................................................................................................................................................................................................................................................................................................................................AGC--AGAGCTGGA-----GATGAG.............................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................A-C---------A-----------------------ATGGAGAAGC--AGAGCTGGA-----GATG...............................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTGGA-----GATGAGATCAACTCAA...................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AATGGACTACCGTTGCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................CAAATGGACTACCGTTGCGGTCTAATTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCA------....................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GAAGC--AGAGCTGGA-----GATGAGATCAAC.......................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................TATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCA------AA..................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................C-ACACACAAATGGACTACCGTTGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAA-CTAGATAACTATACATATATTT...........................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TAGATAATACACACA--------------AACAC------------ACGAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................TTAAGAAAGT--------------------------------------------------GA-C---------A-----------------------ATGGAGA......................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CACACA--------------AACAC------------ACGAACCCATAAATAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................GA-C---------A-----------------------ATGGAGAAGC--AGAGCTGGA-----GAT................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................C------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCA------A...................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGC...........................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...............................................................................................................................................................................................................................................................................................TAATTAAGAAAGT--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--.................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................CAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCA------AAT.................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................AACAC------------ACGAACCCATAAATAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................GAAAGT--------------------------------------------------GA-C---------A-----------------------ATGGAGAAGC--AGAGCTGGA-----...................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................C---------A-----------------------ATGGAGAAGC--AGAGCTGGA-----GAT................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
TAGTATGTAGATAATACACACATACAC--A----CAAACAC------------ACAAACCCATAAATAACACAC--------AC-ACACACACATGGACTACCGTTGCGGTCAAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCAAAAGCAAATAAATAAA---------TAATTAAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGGAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-CTAGATAACTATACATATATTTG-CTGATTAATTT------------AT--GT-AAACCAATATACGATTTATAGCCAACGC------------------ACAG--AAAATGA---AAAACAAAAAAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................TAAA---------TAATTAAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGGA........................................................................................................................................................................2614.00400000004000000000
....................................................................ACACAC--------AC-ACACACACATGGACTACCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000000002000000
...................................................................................................................................................................................................................................................................................AAA---------TAATTAAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGGA........................................................................................................................................................................2512.00200000001000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGGA-----GATGAGATCAACTCAAA-CTAGAT...........................................................................................................................2711.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTG-CTGATTAATTT------------AT--GT-AAACCAA....................................................................2911.00100010000000000000
....................................................................................................................................................................................................................................................................................................AAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGGAGAAGC--AGAGCTG..........................................................................................................................................................2911.00100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACGATTTATAGCCAACGC------------------ACAG--AA.....................2711.00100000000100000000
...............................................................................................................................................................................................................................................................................................TAATTAAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGGAGAAGC--.................................................................................................................................................................2711.00100000000001000000
......................................................................................................................TATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTG............................................................................................................................................................................................................................................................................................................2511.00100000000001000000
......................................................................................................................TATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCAAA........................................................................................................................................................................................................................................................................................................2911.00100000010000000000
..................................................................................................................................................................................................................................................................................TAAA---------TAATTAAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGG.........................................................................................................................................................................2511.00100000001000000000
........................................................................................................................TACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCAAA........................................................................................................................................................................................................................................................................................................2711.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGA-----GATGAGATCAACTC.....................................................................................................................................2011.00110000000000000000
...............................................................................................................................................................................................................................................................................................TAATTAAGGAAGT--------------------------------------------------GA-C---------G-----------------------.............................................................................................................................................................................1711.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTT------------AT--GT-AAACCAATATACGATT...........................................................2611.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAGCCAACGC------------------ACAG--AAAATGA---A............2511.00100000000010000000
...................................................................AACACAC--------AC-ACACACACATGGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110000000000000000
.........................AC--A----CAAACAC------------ACAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16130.15200000001010000000
droSec2
TAGTATGTAGATAATACACACATACAC--A------AACAC------------ACAAACCCATAAATAACATAC--------AC-ACACACAAATGGACTACCGCTGCGGTCTAATTATATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCAAAAGCAAATAAATAAA---------TAATTAAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGGAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-CTAGATAACTATACATATATTTG-CTGATTAATTT------------AT--GT-AAACCAATATACGATTTATAGCCAACGC------------------ACAG--AAAATGT---------AAAA---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................AGC--AGAGCTGGA-----GATGAGATCAACTC.....................................................................................................................................2611.0011000
................................................................................................................................................................................................................................................................................................AATTAAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGGAGA......................................................................................................................................................................2311.0010100
....................................................................................................................................................................................................................................................................................................AAGGAAGT--------------------------------------------------GA-C---------G-----------------------ATGGAGAAG....................................................................................................................................................................2111.0010001
...........................................................................................................................................................................................................................................................................................................................................................................G-----------------------ATGGAGAAGC--AGAGCTGGA-----...................................................................................................................................................2011.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAAGC--AGAGCTGGA-----GATGAGATCA.........................................................................................................................................2811.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAAGC--AGAGCTGGA-----GATGAG.............................................................................................................................................2411.0010100
..........................................................................................................................................................................................................................................................................................................GT--------------------------------------------------GA-C---------G-----------------------ATGGAGAAGC--AGAGC............................................................................................................................................................2111.0010100
droYak3
TAGTATGTAGATAATACACACACAAAAACA----CAAACAC------------ACGAGCCCAT-------------------ACTAAACACACATGGACTACCGTTGCGGTCTAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCATATGCAAATAAATAAAT-AACTAAATAATTAAGGAAGG--------------------------------------------------GA-C---------G-----------------------ATGAAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-TTAGATAACTAAACATATATTTG-CTGATTAATTT------------AT--GT-AAACCAATATACGATTTATAGCCAACGC------------------ACAG--AA-ATGA---AAAACAAAAA---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................AACTAAATAATTAAGGAAGG--------------------------------------------------GA-C---------.....................................................................................................................................................................................................2313.00300000000003
..................................................................................................................................................................................................................................................................................................TTAAGGAAGG--------------------------------------------------GA-C---------G-----------------------ATGAAGAAGC--.................................................................................................................................................................2411.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................C---------G-----------------------ATGAAGAAGC--AGAGCTGGA-----...................................................................................................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................GC--AGAGCTGGA-----GATGAGAT...........................................................................................................................................1911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................ATGAAGAAGC--AGAGCTGGA-----G..................................................................................................................................................2011.00100100000000
................................................................................................................................................................................................................................................................................................AATTAAGGAAGG--------------------------------------------------GA-C---------G-----------------------ATGAA........................................................................................................................................................................2111.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGATCAACTCAAA-TTAGAT...........................................................................................................................2211.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATAGCCAACGC------------------ACAG--AA-ATGA---A............2511.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGC------------------ACAG--AA-ATGA---AAAA.........1911.00100000010000
.................................................................................................................................................................................................................................................................................................ATTAAGGAAGG--------------------------------------------------GA-C---------G-----------------------ATGAAGAAGC--.................................................................................................................................................................2511.00110000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................AAGC--AGAGCTGGA-----GATGAGATC..........................................................................................................................................2211.00100100000000
.......................AAAAACA----CAAACAC------------ACGAGCCCAT-------------------AC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAACTCAAA-TTAGATAACTA......................................................................................................................2311.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTG-CTGATTAATTT------------AT--GT-AAACC......................................................................2511.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................C---------G-----------------------ATGAAGAAGC--AGAGCTGGA-----G..................................................................................................................................................2211.00101000000000
..........................................................................................CACATGGACTACCGTTGCGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
........................AAAACA----CAAACAC------------ACGAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
TAGTATGTAGATAATACACACACACACCAACACACAAACAC------------ACGAGCCCAT-------------------AC-AAACACACATGGACTACCGTTGCGGTCTAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGCAAATGCAAATAAATAAA---------TAATTAAGGAAGG--------------------------------------------------GA-C---------G-----------------------ATGGAGAAGC--AGAGCTGGA-----GATGAGATCAACTCAAA-CTAGATAACTATACATATATTTG-CTGTTTAATTT------------AT--GT-AAACCAATATACGATTTATAGCCAACGC------------------ACAG--AA-ATGA---AAAACAAAAA--CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AAACCAATATACGATTTATAGCCAA..................................................2611.0011000000
......................CACACCAACACACAAACAC------------ACGAGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...............................................................................................................CTAATTTTATACAC------------------------------------------------------------------A----------C-----------------------------------------CAGACA......................................................................................................................................................................................................................................................................................................................2211.0010000010
..........................................................................................................................CAC------------------------------------------------------------------A----------C-----------------------------------------CAGACAAATCGAATTGC...........................................................................................................................................................................................................................................................................................................2211.0010001000
......................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGC--AGAGCTGGA-----GA.................................................................................................................................................1811.0010100000
................................................................................................................................................................................................................................................................................................AATTAAGGAAGG--------------------------------------------------GA-C---------G-----------------------AT...........................................................................................................................................................................1811.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................GGAGAAGC--AGAGCTGGA-----GATG...............................................................................................................................................2111.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAACTCAAA-CTAGATAACT.......................................................................................................................2211.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGGAGAAGC--AGAGCTGGA-----GATGAGATC..........................................................................................................................................2711.0011000000
....ATGTAGATAATACACACACACACCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATCAACTCAAA-CTAGATAACTA......................................................................................................................2611.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGAAGC--AGAGCTGGA-----GATGAG.............................................................................................................................................2111.0010000100
..............................................................T-------------------AC-AAACACACATGGACTACCGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
......................................................................................................................................................................................................................................................GACAAATCGAATTGCAAATGC.....................................................................................................................................................................................................................................................................................................2111.0010000010
.................................................................................................................................................................................................................................................................................ATAAA---------TAATTAAGGAAGG--------------------------------------------------GA-C---------G-----------------------AT...........................................................................................................................................................................2411.0011000000
..............................................................................................................................................................................................................................................................................TAAATAAA---------TAATTAAGGAAGG--------------------------------------------------GA-...............................................................................................................................................................................................................2311.0010000100
.................................................................................................................................................................................................................................................................................................................................................................C---------G-----------------------ATGGAGAAGC--AGAGCTGGA-----...................................................................................................................................................2111.0010000010
.........................................................................................ACACATGGACTACCGTTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................G-----------------------ATGGAGAAGC--AGAGCTGGA-----GATGAG.............................................................................................................................................2611.0011000000
..............................................................T-------------------AC-AAACACACATGGACTACCGTTGCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000

Generated: 05/18/2015 at 05:17 AM