ID:

dps_2617

 Coordinate:

XL_group1e:1163867-1163948 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.9 -13.1 -13.1

Flybase annnotation

exon [dpse_GLEANR_750:3]; CDS [Dpse\GA11418-cds]; CDS [Dpse\GA11418-cds]; exon [dpse_GLEANR_750:4]; intron [Dpse\GA11418-in]

No Repeatable elements found

mature
  1. dps_2617  XL_group1e:1163868-1163888 +
  2. Unknown_group_524:51-71 +
  3. dps_2054  Unknown_group_524:3713-3733 -
  4. dps_2061  Unknown_group_524:8385-8405 -
  5. Unknown_group_621:8833-8853 +
  6. dps_2132  Unknown_group_621:15976-15996 +
  7. Unknown_group_621:18137-18157 -
  8. dps_2138  Unknown_group_621:20787-20807 +
  9. Unknown_group_621:28572-28592 -
  10. dps_2148  Unknown_group_621:31222-31242 +
star

Sense Strand Reads

##################################################----------------------------------------------------------------------------------##################################################
AGGGCGACCACCAGCACACCCAGCCGCGCGCATCGCAAAAGGAGACGCATGTAACTAGACACGGCTGATTGTGCTGCACAGGCCACAGCTCCACAGATGCGCACATTTCAAACGGATGCGTTTATATTTCAGACGCACCCAATCGCCTGTAGGATTCTCGCCATCGCCCACGTTAAGCAAGC
***************************************************..........((..(((.(((((.(((..(((....))).......))))))))..)))..))............******************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body		 SRR902010
ovaries
 M059
embryo
 GSM343916
embryo
 M022
male body		 GSM444067
head
 M062
head
 SRR902012
CNS imaginal disc
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGT......... 24 0 6 157.17 943 856 6 0 57 15 8 0 1 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACG.......... 23 0 6 47.17 283 274 2 0 1 4 2 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGTTA....... 26 0 6 43.50 261 198 9 0 52 1 1 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGTT........ 25 0 6 16.50 99 94 1 0 2 1 1 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCAC........... 22 0 6 11.83 71 64 1 0 0 6 0 0 0 0 0
......................................................................................................................................................AGGATTCTCGCCATCGCCCACGT......... 23 0 6 10.67 64 63 0 0 1 0 0 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGCCCACGT......... 26 0 6 8.50 51 43 0 0 5 3 0 0 0 0 0
..........................CGCGCATCGCAAAAGGAGACG....................................................................................................................................... 21 0 20 6.65 133 0 73 47 0 0 2 10 1 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCC............. 20 0 6 6.50 39 38 0 0 0 1 0 0 0 0 0
..............................CATCGCAAAAGGAGACGCATG................................................................................................................................... 21 0 16 6.13 98 3 87 6 0 0 0 1 1 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCA............ 21 0 6 6.00 36 36 0 0 0 0 0 0 0 0 0
...............................................CATGTAACTAGACACGGCTGA.................................................................................................................. 21 0 9 5.89 53 1 42 8 0 0 0 0 1 0 1
...................................................................................................................................................TGTAGGATTCTCGCCATCGCCCACG.......... 25 0 6 4.83 29 28 0 0 0 0 1 0 0 0 0
........................CGCGCGCATCGCAAAAGGAGA......................................................................................................................................... 21 0 1 4.00 4 0 0 4 0 0 0 0 0 0 0
....................................AAAAGGAGACGCATGTAACTA............................................................................................................................. 21 0 12 3.92 47 0 25 22 0 0 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCCATCGC............... 25 0 6 3.83 23 18 0 0 4 1 0 0 0 0 0
......................................................................................................................................................AGGATTCTCGCCATCGCCCACG.......... 22 0 6 3.67 22 22 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGTTAA...... 27 0 6 3.67 22 22 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGTTAAG..... 28 0 6 3.67 22 17 0 0 4 1 0 0 0 0 0
....................................................................................................................................................GTAGGATTCTCGCCATCGCCCACGT......... 25 0 6 3.33 20 19 0 0 0 1 0 0 0 0 0
.........................GCGCGCATCGCAAAAGGAGAC........................................................................................................................................ 21 0 1 3.00 3 1 1 1 0 0 0 0 0 0 0
......................................................................................................................................................AGGATTCTCGCCATCGCCCACGTTA....... 25 0 6 3.00 18 18 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCCATCGCC.............. 26 0 6 3.00 18 17 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCC.............. 19 0 6 2.83 17 17 0 0 0 0 0 0 0 0 0
...............................ATCGCAAAAGGAGACGCATGT.................................................................................................................................. 21 0 15 2.80 42 0 18 21 0 0 0 0 2 1 0
.................................CGCAAAAGGAGACGCATGTA................................................................................................................................. 20 0 15 2.53 38 1 35 1 0 0 0 0 1 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGCCC............. 22 0 6 2.50 15 11 1 0 1 2 0 0 0 0 0
...................................................TAACTAGACACGGCTGATTGT.............................................................................................................. 21 0 10 2.40 24 0 0 23 0 1 0 0 0 0 0
....................................................................................................................................ACGCACCCAATCGCCTGTAGGATTC......................... 25 0 4 2.25 9 9 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CACCCAATCGCCTGTAGGATTCTCGCC.................... 27 0 6 2.17 13 13 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCTCGCCATCGCCCACGTTAAGCA... 24 0 6 2.17 13 13 0 0 0 0 0 0 0 0 0
..............................CATCGCAAAAGGAGACGCAT.................................................................................................................................... 20 0 19 2.16 41 0 41 0 0 0 0 0 0 0 0
.........................GCGCGCATCGCAAAGGGAGAC........................................................................................................................................ 21 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCCATCGCCC............. 27 0 6 2.00 12 10 0 0 0 2 0 0 0 0 0
..................................................................................................................................................CTGTAGGATTCTCGCCATCGCCCACG.......... 26 0 6 2.00 12 10 0 0 2 0 0 0 0 0 0
.........................GCGCGCGTCGCAAAAGGAGACG....................................................................................................................................... 22 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.........................GCGCGCATCGCAGAGGGAGAC........................................................................................................................................ 21 2 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.........................GCGCGCATCGCAAAAGGAGACG....................................................................................................................................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGCCCA............ 23 0 6 2.00 12 11 0 0 1 0 0 0 0 0 0
........................CGCGCGCATCGCAAAAGGAG.......................................................................................................................................... 20 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0
..........................................................................................................................................................TTCTCGCCATCGCCCACGTTAAGCA... 25 0 6 1.83 11 11 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGCCCAC........... 24 0 6 1.83 11 11 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CTGTAGGATTCTCGCCATCGCC.............. 22 0 6 1.83 11 6 0 0 3 2 0 0 0 0 0
..........................................................................................................................................CCAATCGCCTGTAGGATTCTCGCCA................... 25 0 6 1.83 11 10 0 0 1 0 0 0 0 0 0
.................................................TGTAACTAGACACGGCTGATT................................................................................................................ 21 0 9 1.78 16 1 11 4 0 0 0 0 0 0 0
....................................................AACTAGACACGGCTGATTGTG............................................................................................................. 21 0 11 1.64 18 0 14 4 0 0 0 0 0 0 0
...............................................CATGTAACTAGACACGGCTG................................................................................................................... 20 0 9 1.56 14 1 4 4 0 0 0 1 2 0 2
.................................CGCAAAAGGAGACGCATGTAA................................................................................................................................ 21 0 14 1.50 21 0 17 4 0 0 0 0 0 0 0
.....................................AAAGGAGACGCATGTAACTAG............................................................................................................................ 21 0 12 1.50 18 0 14 2 0 0 0 0 2 0 0
..........................................................................................................................................CCAATCGCCTGTAGGATTCTCGCC.................... 24 0 6 1.50 9 6 0 0 2 1 0 0 0 0 0
...........................................................................................................................................CAATCGCCTGTAGGATTCTCGCCA................... 24 0 6 1.50 9 9 0 0 0 0 0 0 0 0 0
................................................ATGTAACTAGACACGGCTGAT................................................................................................................. 21 0 9 1.44 13 0 9 4 0 0 0 0 0 0 0
...................................................................................................................................GACGCACCCAATCGCCTGTAG.............................. 21 0 10 1.40 14 1 13 0 0 0 0 0 0 0 0
...................................CAAAAGGAGACGCATGTAAC............................................................................................................................... 20 0 14 1.36 19 0 16 3 0 0 0 0 0 0 0
................................................................CTGATTGTGCTGCACAGGCC.................................................................................................. 20 0 17 1.35 23 1 18 0 0 1 0 1 1 1 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCCATCG................ 24 0 6 1.33 8 7 1 0 0 0 0 0 0 0 0
......................................AAGGAGACGCATGTAACTAG............................................................................................................................ 20 0 12 1.33 16 0 16 0 0 0 0 0 0 0 0
..........................CGCGCATCGCAAAAGGAGAC........................................................................................................................................ 20 0 20 1.30 26 0 19 5 0 0 0 1 0 1 0
................................................................CTGATTGTGCTGCACAGGC................................................................................................... 19 0 17 1.18 20 3 17 0 0 0 0 0 0 0 0
......................................................................................................................................................AGGATTCTCGCCATCGCCCACGTT........ 24 0 6 1.17 7 7 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGCC.............. 21 0 6 1.17 7 7 0 0 0 0 0 0 0 0 0
......................................AAGGAGACGCATGTAACTAGA........................................................................................................................... 21 0 12 1.17 14 0 8 6 0 0 0 0 0 0 0
....................................................................................................................................................GTAGGATTCTCGCCATCGCCCACG.......... 24 0 6 1.17 7 7 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CGCACCCAATCGCCTGTAGGA............................ 21 0 19 1.16 22 5 11 6 0 0 0 0 0 0 0
.............................................................CGGCTGATTGTGCTGCACAGG.................................................................................................... 21 0 17 1.12 19 5 9 1 0 0 0 0 2 2 0
.............................................CGCATGTAACTAGACACGGC..................................................................................................................... 20 0 9 1.11 10 0 6 1 0 0 0 2 1 0 0
..........................................AGACGCATGTAACTAGACACG....................................................................................................................... 21 0 9 1.11 10 1 3 4 0 0 0 1 0 1 0
....................................................AACTAGACACGGCTGATTGT.............................................................................................................. 20 0 11 1.09 12 3 2 7 0 0 0 0 0 0 0
......................................................CTAGACACGGCTGATTGTGCT........................................................................................................... 21 0 11 1.09 12 0 3 9 0 0 0 0 0 0 0
....................................................................................................................................ACGCACCCAATCGCCTGTAGG............................. 21 0 13 1.08 14 2 9 3 0 0 0 0 0 0 0
............................CGCATCGCAAAAGGAGACGCA..................................................................................................................................... 21 0 20 1.05 21 0 17 4 0 0 0 0 0 0 0
...........CAGCACGCCCGGCCGCGCGCA...................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................GCCGCGCGCATCGCAAAAGGAGACGC...................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................ATTTCAAACGGATGCGTTTATA........................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................CGCGCGCATCGCAAAGGGAGA......................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................................CTGTAGGATTCTCGCCATCGCCCAC........... 25 0 6 1.00 6 6 0 0 0 0 0 0 0 0 0
...............ACACCCAGCCGCGCGCATCGC.................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................AGACGCACCCAATCGCCTGTAGGATTAT........................ 28 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
......ACCACCAGCACACCCAGCCGCGCGCAT..................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................AGCCGCGCGCATCGCAAAAGG............................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
........................CGCGCGCATCGCAAAAGGAGACC....................................................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.............GCACACCCAGCCGCGCGCATC.................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................GCGCATCGCAAAAGGAGACG....................................................................................................................................... 20 0 20 1.00 20 1 8 10 0 0 0 1 0 0 0
.....................................................................................................................................CGCACCCAATCGCCTGTAGG............................. 20 0 19 1.00 19 5 7 6 0 0 0 0 1 0 0
..................................GCAAAAGGAGACGCATGTA................................................................................................................................. 19 0 15 1.00 15 0 15 0 0 0 0 0 0 0 0
...............................ATCGCAAAAGGAGACGCATG................................................................................................................................... 20 0 16 1.00 16 1 10 2 0 0 0 0 3 0 0
...................CCAGCCGCGCGCATCGCAGAAGGAGACGC...................................................................................................................................... 29 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................CACCCAATCGCCTGTAGGATTCTCGC..................... 26 0 6 1.00 6 6 0 0 0 0 0 0 0 0 0
........................CGCGCGCATCGCAAAAGGAGAC........................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................GCGCGCATCGCAAAGGGAGACG....................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGC......... 24 1 6 1.00 6 2 0 0 0 4 0 0 0 0 0
.....GACCGCCAGCACGCCCAGCCG............................................................................................................................................................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCCATC................. 23 0 6 1.00 6 3 0 0 2 1 0 0 0 0 0
.................ACCCAGCCGCGCGCATCGC.................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
....................CAGCCGCGCGCATCGCAAAAGGA........................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................GGATTCTCGCCATCGCCCACGT......... 22 0 6 1.00 6 6 0 0 0 0 0 0 0 0 0
.........................GCGCGCATCGCAAAGGGAGA......................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCCATCGCCCA............ 28 0 6 1.00 6 5 0 0 1 0 0 0 0 0 0
........................CGCGCGCATCGCAAAGGGAG.......................................................................................................................................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................................TCGCAAAAGGAGACGCATGTA................................................................................................................................. 21 0 15 0.93 14 0 12 1 0 0 0 0 0 1 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCA............. 20 1 6 0.83 5 5 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGTTATG..... 28 1 6 0.83 5 0 0 0 5 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGTTT....... 26 1 6 0.83 5 1 0 0 3 1 0 0 0 0 0
.......................................................................................................................................CACCCAATCGCCTGTAGGATTCTCGCCA................... 28 0 6 0.83 5 5 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CTGTAGGATTCTCGCCATCGCCCACGT......... 27 0 6 0.83 5 5 0 0 0 0 0 0 0 0 0
...................................................TAACTAGACACGGCTGATTG............................................................................................................... 20 0 10 0.80 8 1 3 3 0 0 1 0 0 0 0
..............................................................................................................................TTTCAGACGCACCCAATCGCC................................... 21 0 10 0.80 8 1 1 6 0 0 0 0 0 0 0
..............................................GCATGTAACTAGACACGGC..................................................................................................................... 19 0 9 0.78 7 0 7 0 0 0 0 0 0 0 0
..................................GCAAAAGGAGACGCATGTAAC............................................................................................................................... 21 0 14 0.71 10 0 9 1 0 0 0 0 0 0 0
............................CGCATCGCAAAAGGAGACGC...................................................................................................................................... 20 0 20 0.70 14 1 11 1 0 0 0 0 1 0 0
................................................................................................................CGGATGCGTTTATATTTCAGA................................................. 21 0 10 0.70 7 0 7 0 0 0 0 0 0 0 0
............................CGCATCGCAAAAGGAGACG....................................................................................................................................... 19 0 20 0.70 14 0 11 1 0 0 0 2 0 0 0
.............................................................................................................................................ATCGCCTGTAGGATTCTCGCCATCGC............... 26 0 6 0.67 4 4 0 0 0 0 0 0 0 0 0
..............................CATCGCAAAAGGAGACGCATGT.................................................................................................................................. 22 0 15 0.67 10 0 8 1 0 0 0 0 0 0 1
......................................................................................................................................................AGGATTCTCGCCATCGCCCA............ 20 0 6 0.67 4 4 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGC..................... 19 0 6 0.67 4 3 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................TCTCGCCATCGCCCACGTTAAGCAAG. 26 0 6 0.67 4 4 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCTCGCCATCGCCCACGTTAAGCAAGC 27 0 6 0.67 4 4 0 0 0 0 0 0 0 0 0
..........................................................................................................................................CCAATCGCCTGTAGGATTCTCGCCAT.................. 26 0 6 0.67 4 1 0 0 3 0 0 0 0 0 0
............................................................................................................................................AATCGCCTGTAGGATTCTCGCCA................... 23 0 6 0.67 4 2 0 0 2 0 0 0 0 0 0
.............................................................................................................................................ATCGCCTGTAGGATTCTCGCCATCGCCC............. 28 0 6 0.67 4 1 2 0 1 0 0 0 0 0 0
....................................................................................................................................................CTAGGATTCTCGCCATCGCCCACG.......... 24 1 6 0.67 4 4 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AGGATTCTCGCCATCGCCCAC........... 21 0 6 0.67 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGA......... 24 1 6 0.67 4 2 0 0 1 1 0 0 0 0 0
..........................CGCGCATCGCAAGGGGAGACG....................................................................................................................................... 21 2 20 0.65 13 0 3 9 0 0 0 0 1 0 0
.............................GCATCGCAAAAGGAGACGCA..................................................................................................................................... 20 0 20 0.65 13 2 6 5 0 0 0 0 0 0 0
.......................................................TAGACACGGCTGATTGTGCTG.......................................................................................................... 21 0 11 0.64 7 1 1 4 0 0 0 0 0 1 0
..........................CGCGCATCGCAAAGGGAGACG....................................................................................................................................... 21 1 20 0.60 12 1 3 8 0 0 0 0 0 0 0
...........................................GACGCATGTAACTAGACACGG...................................................................................................................... 21 0 9 0.56 5 3 2 0 0 0 0 0 0 0 0
..........................................AGACGCATGTAACTAGACAC........................................................................................................................ 20 0 9 0.56 5 0 4 1 0 0 0 0 0 0 0
..............................................GCATGTAACTAGACACGGCTG................................................................................................................... 21 0 9 0.56 5 1 4 0 0 0 0 0 0 0 0
..........................................AGACGTATGTAACTAGACAC........................................................................................................................ 20 1 9 0.56 5 0 5 0 0 0 0 0 0 0 0
............................................ACGCATGTAACTAGACACGGC..................................................................................................................... 21 0 9 0.56 5 0 4 0 0 0 0 1 0 0 0
............................................ACGTATGTAACTAGACACGGC..................................................................................................................... 21 1 9 0.56 5 0 5 0 0 0 0 0 0 0 0
..........................................AGACGCATGTAACTAGACACGG...................................................................................................................... 22 0 9 0.56 5 0 5 0 0 0 0 0 0 0 0
.........................................GAGACGCATGTAACTAGACACGGC..................................................................................................................... 24 0 9 0.56 5 0 5 0 0 0 0 0 0 0 0
..........................................AGACGCATGTAACTAGACACGGC..................................................................................................................... 23 0 9 0.56 5 0 5 0 0 0 0 0 0 0 0
........................................................AGACACGGCTGATTGTGCTGC......................................................................................................... 21 0 11 0.55 6 2 0 2 0 0 1 0 1 0 0
......................................................CTAGACACGGCTGATTGTG............................................................................................................. 19 0 11 0.55 6 0 4 0 0 0 0 0 2 0 0
....................................................................................................................................ACGCACCCAATCGCCTGTAGGAT........................... 23 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CCCAATCGCCTGTAGGATTCTCGCCA................... 26 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................................CGCACCCAATCGCCTGTAGGATTCT........................ 25 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CCCAATCGCCTGTAGGATTCTCGCC.................... 25 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
..................................................GTAACTAGACACGGCTGATTG............................................................................................................... 21 0 10 0.50 5 1 1 1 0 1 0 0 1 0 0
........................................................................................................................................ACCCAATCGCCTGTAGGATTCTCGC..................... 25 0 6 0.50 3 1 2 0 0 0 0 0 0 0 0
....................................AAAAGGAGACGCATGTAACTAGA........................................................................................................................... 23 0 12 0.50 6 0 0 6 0 0 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCC.................... 20 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTAGGATTCTCGCCATCGCCC............. 21 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...................................................................................................................................GACGCACCCAATCGCCTGTAGG............................. 22 0 10 0.50 5 0 5 0 0 0 0 0 0 0 0
...............................................................................................................................................CGCCTGTAGGATTCTCGCCATCGCCC............. 26 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CTGTAGGATTCTCGCCATCGCCCA............ 24 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTCTCGCCATCGCCCACGTTAAG..... 23 0 6 0.50 3 0 0 0 3 0 0 0 0 0 0
.....................................................................................................................................CGCACCCAATCGCCTGTAGGATTC......................... 24 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTCTCGCCATCGCCCACGTTAAGCAAG. 27 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCTCGCCATCGCCCACGTTAA...... 21 0 6 0.50 3 1 0 0 2 0 0 0 0 0 0
AGGGCGACCACCAGCACACCC................................................................................................................................................................. 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................CGCCTGTAGGATTCTCGCCATCGCC.............. 25 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
................................................................................................................................................GCCTGTAGGATTCTCGCCATCGCCC............. 25 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
........................................................................................................................................ACCCAATCGCCTGTAGGATTCTCGCC.................... 26 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGTTAAA..... 28 1 6 0.50 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................................................GCACCCAATCGCCTGTAGGATTC......................... 23 0 6 0.50 3 3 0 0 0 0 0 0 0 0 0
...............................................................GCTGATTGTGCTGCACAGG.................................................................................................... 19 0 17 0.47 8 1 6 1 0 0 0 0 0 0 0
...............................ATCGCAAAGGGAGACGCATGT.................................................................................................................................. 21 1 15 0.47 7 0 0 6 0 0 0 0 1 0 0
.......................................................TAGACACGGCTGATTGTGCT........................................................................................................... 20 0 11 0.45 5 0 0 4 0 0 0 1 0 0 0
........................................................AGACACGGCTGATTGTGCTG.......................................................................................................... 20 0 11 0.45 5 1 1 0 0 0 0 2 1 0 0
.............................GCATCGCAAAAGGAGACGC...................................................................................................................................... 19 0 20 0.45 9 0 8 1 0 0 0 0 0 0 0
..............................................GCATGTAACTAGACACGGCT.................................................................................................................... 20 0 9 0.44 4 0 4 0 0 0 0 0 0 0 0
.......................................AGGAGACGTATGTAACTAGACACGGC..................................................................................................................... 26 1 9 0.44 4 0 4 0 0 0 0 0 0 0 0
..........................................AGACGTATGTAACTAGACACG....................................................................................................................... 21 1 9 0.44 4 0 3 1 0 0 0 0 0 0 0
...............................ATCGCAAAAGGAGACGCAT.................................................................................................................................... 19 0 19 0.42 8 1 6 0 0 0 0 0 0 0 1
.....................................AAAGGAGACGCATGTAACTA............................................................................................................................. 20 0 12 0.42 5 0 0 4 0 0 0 0 1 0 0
...............................................................GCTGATTGTGCTGCACAGGC................................................................................................... 20 0 17 0.41 7 1 6 0 0 0 0 0 0 0 0
...................................................................................................................................GACGCACTCAATCGCCTGTAG.............................. 21 1 10 0.40 4 0 4 0 0 0 0 0 0 0 0
.........................................................................................................TTTCAAACGGATGCGTTTATA........................................................ 21 0 16 0.38 6 0 6 0 0 0 0 0 0 0 0
...................................................................................................................ATGCGTTTATATTTCAGACG............................................... 20 0 11 0.36 4 0 3 0 0 0 0 1 0 0 0
....................................................AACTAGACACGGCTGATTG............................................................................................................... 19 0 11 0.36 4 0 1 3 0 0 0 0 0 0 0
..........................CGCGCATCGCAAAAGGAGACGC...................................................................................................................................... 22 0 20 0.35 7 1 4 0 2 0 0 0 0 0 0
.............................................CGCATGTAACTAGACACGGCT.................................................................................................................... 21 0 9 0.33 3 0 2 0 0 0 1 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGC............... 20 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGCCCACGTTA....... 28 0 6 0.33 2 0 0 0 2 0 0 0 0 0 0
..................................................................................................................................................CTGTAGGATTCTCGCCATCGCCC............. 23 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................TCGCCATCGCCCACGTTAAGCAAGC 25 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATTGCCCACGT......... 24 1 6 0.33 2 0 0 0 2 0 0 0 0 0 0
.............................................................CGGCTGATTGTGCTGCACAG..................................................................................................... 20 0 18 0.33 6 2 4 0 0 0 0 0 0 0 0
......................................................................................................................................................AGGATTCTCGCCATCGCCCACGTTAA...... 26 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................GCACCCAATCGCCTGTAGGATTTCAG...................... 26 3 6 0.33 2 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................CGCCTGTAGGATTCTCGCCATCG................ 23 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCACGTA........ 25 1 6 0.33 2 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................AGGATTCTCGCCATCGCCC............. 19 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CAATCGCCTGTAGGATTCTCGCCAT.................. 25 0 6 0.33 2 1 0 0 1 0 0 0 0 0 0
..............................................GTATGTAACTAGACACGGCTG................................................................................................................... 21 1 9 0.33 3 0 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGC............... 18 0 6 0.33 2 0 0 0 2 0 0 0 0 0 0
.................................................................................................................................................CCTGTAGGATTCTCGCCATCGCCCA............ 25 0 6 0.33 2 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................CCAATCGCCTGTAGGATTCTCGC..................... 23 0 6 0.33 2 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................CTGTAGGATTCTCGCCATCGC............... 21 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTGTCGCCATCGCCCACGTTA....... 26 1 6 0.33 2 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................TACGATTCTCGCCATCGCCCACGT......... 24 1 6 0.33 2 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGCCCACGTT........ 27 0 6 0.33 2 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................ATTCTCGCCATCGCCCACGT......... 20 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCTTACGT......... 24 2 6 0.33 2 0 0 0 2 0 0 0 0 0 0
.................................................TGTAACTAGACACGGCTGAT................................................................................................................. 20 0 9 0.33 3 0 3 0 0 0 0 0 0 0 0
..........................................................................................................................................................TTCTCGCCATCGCCCACGTTAAGCAA.. 26 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCTCGCCATCGCCCACGTTAAGCAA.. 25 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................GATTCTCGCCATCGCCCACGTTA....... 23 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCG................ 19 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CACCCAATCGCCTGTAGGATTCTCGCGT................... 28 2 6 0.33 2 0 0 0 2 0 0 0 0 0 0
.............................................................................................................................................ATCGCCTGTAGGATTCTCGCCA................... 22 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
........................................GGAGACGCATGTAACTAGACACGGC..................................................................................................................... 25 0 9 0.33 3 0 3 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCCATCGT............... 25 1 6 0.33 2 0 0 0 2 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCT............. 20 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
................................................................................................................................................GCCTGTAGGATTCTCGCCATCGCCCA............ 26 0 6 0.33 2 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................ACCCAATCGCCTGTAGGATTCTCGCCA................... 27 0 6 0.33 2 0 0 0 2 0 0 0 0 0 0
..........................................................................................................................................................TTCTCGCCATCGCCCACGTTAAGCAAGC 28 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................CTAGGATTCTCGCCATCGCCCACGT......... 25 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CTCGCCATCGCCCACGTTAAGC.... 22 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
........................CGCGCGCATCGCAAGGGGAGG......................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CTGTAGGATTCTCGCCATCGCCA............. 23 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCTCGCCATCGCCCACGTTAAGC.... 23 0 6 0.33 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TGGGATTCTCGCCATCGCCCACGT......... 24 1 6 0.33 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................TTCAAACGGATGCGTTTATAT....................................................... 21 0 16 0.31 5 0 3 2 0 0 0 0 0 0 0
...............................................................................................................ACGGATGCGTTTATATTTCAG.................................................. 21 0 16 0.31 5 0 4 1 0 0 0 0 0 0 0
..........................................................................................................TTCAAACGGATGCGTTTATATTTCAGACG............................................... 29 0 10 0.30 3 0 0 3 0 0 0 0 0 0 0
...............................................................................................................................TTCAGACGCACCCAATCGCC................................... 20 0 10 0.30 3 0 0 3 0 0 0 0 0 0 0
................................................................................................................................TCAGACGCACCCAATCGCCTG................................. 21 0 10 0.30 3 3 0 0 0 0 0 0 0 0 0
.................................................................TGATTGTGCTGCACAGGCCA................................................................................................. 20 0 17 0.29 5 3 1 0 0 0 0 0 1 0 0
...................................................................................................................ATGCGTTTATATTTCAGAC................................................ 19 0 11 0.27 3 0 0 1 0 0 0 2 0 0 0
.....................................................ACTAGACACGGCTGATTGTG............................................................................................................. 20 0 11 0.27 3 0 1 1 0 0 0 0 1 0 0
.............................GCATCGCAAAAGGAGACGCAT.................................................................................................................................... 21 0 19 0.26 5 0 5 0 0 0 0 0 0 0 0
.........................................................................CTGCACAGGCCACAGCTCCAC........................................................................................ 21 0 16 0.25 4 1 0 1 0 0 0 0 0 2 0
.....................................................................................................................................CGCACCCAATCGCCTGTAGGTT........................... 22 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................ACGCACCCAATCGCCTGTAGGATTCT........................ 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
................................TCGCAAAAGGAGACGCATG................................................................................................................................... 19 0 16 0.25 4 2 2 0 0 0 0 0 0 0 0
.....................................................................................................................................CGCACCCAATCGCCTGTAGGATTCTCG...................... 27 0 4 0.25 1 0 0 0 0 1 0 0 0 0 0
..........................CGCGCATCGCAAAAGGAGA......................................................................................................................................... 19 0 20 0.25 5 0 1 4 0 0 0 0 0 0 0
.......................................................................................................................................CACCCAATCGCCTGTAGGA............................ 19 0 20 0.25 5 0 3 1 0 0 0 1 0 0 0
.....................................................................................................................................CGCACCCAATCGCCTGTAGGATTT......................... 24 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
............................CGCATCGCAAAAGGAGACGCATG................................................................................................................................... 23 0 16 0.25 4 0 3 1 0 0 0 0 0 0 0
.................................................TGTAACTAGACACGGCTGATTGTG............................................................................................................. 24 0 9 0.22 2 1 1 0 0 0 0 0 0 0 0
.............................................CGTATGTAACTAGACACGGC..................................................................................................................... 20 1 9 0.22 2 0 2 0 0 0 0 0 0 0 0
...............................................CATGTAACTAGACACGGCTGATTGTGC............................................................................................................ 27 0 9 0.22 2 0 2 0 0 0 0 0 0 0 0
................................................ATGTAACTAGACACGGCTGA.................................................................................................................. 20 0 9 0.22 2 1 1 0 0 0 0 0 0 0 0
.........................................GAGACGCATGTAACTAGACACGGCT.................................................................................................................... 25 0 9 0.22 2 0 2 0 0 0 0 0 0 0 0
........................................GGAGACGTATGTAACTAGACACGGC..................................................................................................................... 25 1 9 0.22 2 0 2 0 0 0 0 0 0 0 0
.....................................AAAGGAGACGCATGTAACTAGACACGGC..................................................................................................................... 28 0 9 0.22 2 0 1 1 0 0 0 0 0 0 0
.......................................AGGAGACGCATGTAACTAGACACGGC..................................................................................................................... 26 0 9 0.22 2 0 2 0 0 0 0 0 0 0 0
....................................AAAAGGAGACGCATGTAACT.............................................................................................................................. 20 0 14 0.21 3 0 0 3 0 0 0 0 0 0 0
...................................CAAAAGGAGACGCATGTAACT.............................................................................................................................. 21 0 14 0.21 3 0 0 3 0 0 0 0 0 0 0
..............................................................................................................................TTTCAGACGCACCCAATCGCCTGTAGGA............................ 28 0 10 0.20 2 0 2 0 0 0 0 0 0 0 0
..............................CATCGCAAAAGGAGACGCAA.................................................................................................................................... 20 1 20 0.20 4 0 4 0 0 0 0 0 0 0 0
...................................................TAACTAGACGCGGCTGATTGT.............................................................................................................. 21 1 10 0.20 2 0 0 1 0 0 1 0 0 0 0
..............................CATCGCAAAAGGAGACGCA..................................................................................................................................... 19 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0
...................................................................................................................................GACGCACCCAATCGCCTGTAGT............................. 22 1 10 0.20 2 0 2 0 0 0 0 0 0 0 0
..................................................GTAACTAGACACGGCTGATT................................................................................................................ 20 0 10 0.20 2 1 1 0 0 0 0 0 0 0 0
............................................................................................................................TATTTCAGACGCACCCAATCG..................................... 21 0 10 0.20 2 0 0 2 0 0 0 0 0 0 0
..............................................................................................................................TTTCAGACGCACCCAATCGC.................................... 20 0 10 0.20 2 0 0 1 0 1 0 0 0 0 0
..................................................................................................................................AGACGCACCCAATCGCCTGTA............................... 21 0 10 0.20 2 1 1 0 0 0 0 0 0 0 0
..............................CATCGCAAAAGGAGACGCATGTA................................................................................................................................. 23 0 15 0.20 3 0 3 0 0 0 0 0 0 0 0
........................................................................................................................TTTATATTTCAGACGCACCCA......................................... 21 0 10 0.20 2 0 1 0 0 0 0 0 0 1 0
...............................ATCGCAAAAGGAGACGTATGT.................................................................................................................................. 21 1 15 0.20 3 0 2 1 0 0 0 0 0 0 0
..........................CGCGCATCGCAGGGGGAGACG....................................................................................................................................... 21 3 20 0.20 4 0 0 2 0 0 1 0 0 1 0
......................................................................................................................................GCACCCAATCGCCTGTAGG............................. 19 0 20 0.20 4 0 4 0 0 0 0 0 0 0 0
..............................CATCGCAAAAGGAGACGCATGA.................................................................................................................................. 22 1 16 0.19 3 0 3 0 0 0 0 0 0 0 0
......................................................CTAGACACGGCTGATTGTGC............................................................................................................ 20 0 11 0.18 2 0 1 1 0 0 0 0 0 0 0
.....................................................ACTAGACACGGCTGATTGTGC............................................................................................................ 21 0 11 0.18 2 0 0 1 0 0 0 0 1 0 0
....................................................AACTAGACACGGCTGATTGTGCT........................................................................................................... 23 0 11 0.18 2 0 2 0 0 0 0 0 0 0 0
...............................................................GCTGATTGTGCTGCACAGGCC.................................................................................................. 21 0 17 0.18 3 0 1 0 0 1 0 0 0 1 0
...............................................................GCTGATTGTGCTGCGCAGG.................................................................................................... 19 1 17 0.18 3 0 1 1 0 0 0 0 1 0 0
..............................................................GGCTGATTGTGCTGCACAGGC................................................................................................... 21 0 17 0.18 3 0 1 0 0 0 2 0 0 0 0
.............................................................................................................................................................TCGCCATCGCCCACGTTAAGCAAG. 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................ATAGGATTCTCGCCATCGCCCACGTTAAG..... 29 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTAGGATTCTCGCCATCGCC.............. 20 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................AGGATTCTCGCCACCGCCCACGT......... 23 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATGCTCGCCATCGCC.............. 19 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCGCCCCCGT......... 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGCCCTTTT......... 26 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCCATCGCA.............. 26 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................ATCGCCTGTAGGATTCTCG...................... 19 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCCATCGCCCAC........... 29 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCCCCATCGCCCACGTTAAG..... 28 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................TCGCCTGTAGGATTCTCGCCAT.................. 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................CGCTATAGGATTCTCGCCATCGCCCACGT......... 29 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................GATTCTCGCCATCGCCCACGTTAAG..... 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CGCCTGTAGGATTCTCGC..................... 18 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGACATCGC............... 18 1 6 0.17 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................CGCCATCGCCCACGTTAAGCAAG. 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCACCATCGCCCACGT......... 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGCCCAAA.......... 25 2 6 0.17 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GTAGGATTCTCGCCATCGCCCACGTTAA...... 28 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
................................................................CTGATTGTGCTGCACAGGTTCC................................................................................................ 22 3 18 0.17 3 0 2 0 0 0 0 0 0 1 0
......................................................................................................................................................AGGATTCTCGCCATCGCCCACGTTAAG..... 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCG................ 17 0 6 0.17 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................TAGGATTCTCGCCATCCCCCAC........... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................CCCAATCGCCTGTAGGATTCTCGCCAT.................. 27 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................ATCGCCTGTAGGATTCTCGCC.................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CGCCTGTAGGATTCTCGCCATCGC............... 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................CTGTAGGATTCTCGCCATCGCCCATG.......... 26 1 6 0.17 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................CACCCAATCGCCTGTAGGATTCT........................ 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................TGTAGGATTCTCGCCATCGCCCACGC......... 26 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................GTATTCTCGCCATCGCCCACGT......... 22 1 6 0.17 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................TCTCGCCATCGCCCACGT......... 18 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................CGCCATCGCCCACGTTAAGCAAGC 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TCCCGCTGGTGGTCGTGTGGGTCGGCGCGCGTAGCGTTTTCCTCTGCGTACATTGATCTGTGCCGACTAACACGACGTGTCCGGTGTCGAGGTGTCTACGCGTGTAAAGTTTGCCTACGCAAATATAAAGTCTGCGTGGGTTAGCGGACATCCTAAGAGCGGTAGCGGGTGCAATTCGTTCG
********************************************************..........((..(((.(((((.(((..(((....))).......))))))))..)))..))............*************************************************** 		Read size # Mismatch Hit Count Total Norm Total V112
male body		 M040
female body
 SRR902011
testis
 GSM444067
head
 M062
head
 M022
male body		 GSM343916
embryo
 SRR902010
ovaries
 M059
embryo
 SRR902012
CNS imaginal disc
........................................................................................................................................TGGGTTAGCGGACATCCTAAGAG....................... 23 0 6 13.83 83 0 80 0 0 0 0 0 3 0 0
.........................................................................................................................................GGGTTAGCGGACATCCTAAGAG....................... 22 0 6 10.50 63 0 56 1 0 0 0 2 4 0 0
.........................................................................GACGTGTCCGGTGTCGAGGT......................................................................................... 20 0 16 8.63 138 26 2 108 1 0 0 0 0 0 1
...................................................................................................................................CTGCGTGGGTTAGCGGACATC.............................. 21 0 10 8.00 80 74 2 0 3 0 0 1 0 0 0
.......................................................................................................................................GTGGGTTAGCGGACATCCTAAGAG....................... 24 0 6 6.17 37 0 37 0 0 0 0 0 0 0 0
..........................................................................................................................ATATAAAGTCTGCGTGGGTTA....................................... 21 0 10 5.60 56 36 3 16 1 0 0 0 0 0 0
..........................................................................................................................................GGTTAGCGGACATCCTAAGAG....................... 21 0 6 5.33 32 0 31 0 0 0 0 1 0 0 0
................................................................................................................GCCTACGCAAATATAAAGTCT................................................. 21 0 10 4.20 42 2 3 17 0 0 20 0 0 0 0
........................................................................CGACGTGTCCGGTGTCGAGGT......................................................................................... 21 0 16 3.38 54 16 2 31 4 0 0 0 0 0 1
.................................GCGTTTTCCTCTGCGTACATT................................................................................................................................ 21 0 14 3.29 46 45 0 1 0 0 0 0 0 0 0
...........................................................................CGTGTCCGGTGTCGAGGTGT....................................................................................... 20 0 16 3.19 51 41 2 5 3 0 0 0 0 0 0
....GCTGGTGGTCGTGTGGGTC............................................................................................................................................................... 19 0 20 3.15 63 56 3 1 3 0 0 0 0 0 0
............................................................................GTGTCCGGTGTCGAGGTGT....................................................................................... 19 0 16 2.81 45 23 4 15 2 0 1 0 0 0 0
............................................................................GTGTCCGGTGTCGAGGTGTC...................................................................................... 20 0 16 2.75 44 20 4 14 4 0 1 1 0 0 0
...................................................................................................................................CTGCGTGGGTTAGCGGACAT............................... 20 0 10 2.70 27 23 1 1 0 2 0 0 0 0 0
..............................GTAGCGTTTTCCTCTGCGTAC................................................................................................................................... 21 0 16 2.50 40 32 1 3 2 0 2 0 0 0 0
..................................CGTTTTCCTCTGCGTACATTG............................................................................................................................... 21 0 14 2.43 34 25 1 3 2 0 0 2 0 1 0
.........................................................................................................................AATATAAAGTCTGCGTGGGTT........................................ 21 0 10 2.20 22 20 0 2 0 0 0 0 0 0 0
..CCGCTGGTGGTCGTGTGGGTC............................................................................................................................................................... 21 0 20 2.15 43 38 1 0 3 1 0 0 0 0 0
.................................................ACATTGATCTGTGCCGACTAA................................................................................................................ 21 0 9 2.11 19 16 2 0 0 0 0 1 0 0 0
.....................................................................................................................................GCGTGGGTTAGCGGACATCCT............................ 21 0 19 2.11 40 35 3 0 1 0 0 1 0 0 0
............................................................TGCCGACTAACACGACGTGTC..................................................................................................... 21 0 18 2.06 37 30 1 0 4 1 0 1 0 0 0
........................................................................................................................................TGGGTTAGCGGACATCCTAAGA........................ 22 0 6 2.00 12 0 12 0 0 0 0 0 0 0 0
......................................TTCCTCTGCGTACATTGATCT........................................................................................................................... 21 0 12 2.00 24 18 4 0 1 0 0 1 0 0 0
...........................................................................CGTGTCCGGTGTCGAGGTGTC...................................................................................... 21 0 16 1.94 31 26 1 0 2 0 0 1 0 0 1
..........................................................................ACGTGTCCGGTGTCGAGGTGT....................................................................................... 21 0 16 1.81 29 20 0 7 1 0 0 0 0 0 1
...................................GTTTTCCTCTGCGTACATTGA.............................................................................................................................. 21 0 14 1.79 25 19 2 2 1 0 1 0 0 0 0
........................................CCTCTGCGTACATTGATCTG.......................................................................................................................... 20 0 9 1.67 15 10 2 0 1 2 0 0 0 0 0
.........................................................................................................................................GGGTTAGCGGACATCCTAAGA........................ 21 0 6 1.67 10 0 10 0 0 0 0 0 0 0 0
..................................................................................................................CTACGCAAATATAAAGTCTGC............................................... 21 0 10 1.60 16 0 0 15 0 1 0 0 0 0 0
.................................GCGTTTTCCTCTGCGTACAT................................................................................................................................. 20 0 15 1.60 24 20 1 2 1 0 0 0 0 0 0
.....................................................................................................................................GCGTGGGTTAGCGGACATC.............................. 19 0 19 1.58 30 24 0 2 3 1 0 0 0 0 0
...CGCTGGTGGTCGTGTGGGTC............................................................................................................................................................... 20 0 20 1.50 30 24 3 2 1 0 0 0 0 0 0
............................................................................................................................ATAAAGTCTGCGTGGGTTAGC..................................... 21 0 10 1.50 15 4 0 11 0 0 0 0 0 0 0
...................................................................................................................................CTGCGTGGGTTAGCGGACA................................ 19 0 10 1.40 14 14 0 0 0 0 0 0 0 0 0
....................................................................................................................................TGCGTGGGTTAGCGGACATC.............................. 20 0 13 1.38 18 17 1 0 0 0 0 0 0 0 0
.........................................................................GACGTGTCCGGTGTCGAGGTG........................................................................................ 21 0 16 1.38 22 11 1 8 0 0 2 0 0 0 0
.....................................................................................................................................GCGTGGGTTAGCGGACATCC............................. 20 0 19 1.32 25 21 1 3 0 0 0 0 0 0 0
...........................................................................................................................TATAAAGTCTGCGTGGGTTA....................................... 20 0 10 1.30 13 12 0 1 0 0 0 0 0 0 0
..................................CGTTTTCCTCTGCGTACATT................................................................................................................................ 20 0 14 1.29 18 14 0 2 2 0 0 0 0 0 0
..........................................................................ACGTGTCCGGTGTCGAGGTG........................................................................................ 20 0 16 1.25 20 14 0 5 0 0 0 0 0 1 0
..........................................TCTGCGTACATTGATCTGTGC....................................................................................................................... 21 0 9 1.22 11 11 0 0 0 0 0 0 0 0 0
.........................................CTCTGCGTACATTGATCTGTG........................................................................................................................ 21 0 9 1.22 11 4 2 4 1 0 0 0 0 0 0
...................................GTTTTCCTCTGCGTACATTG............................................................................................................................... 20 0 14 1.21 17 8 0 4 5 0 0 0 0 0 0
..................................................CATTGATCTGTGCCGACTAAC............................................................................................................... 21 0 10 1.20 12 6 0 6 0 0 0 0 0 0 0
...............................................................................................................................................................CGGTAGCGGGTGCAATTCGT... 20 0 6 1.17 7 1 6 0 0 0 0 0 0 0 0
................................AGCGTTTTCCTCTGCGTACAT................................................................................................................................. 21 0 15 1.13 17 15 1 1 0 0 0 0 0 0 0
............................................................................GTGTCCGGTGTCGAGGTGTCT..................................................................................... 21 0 16 1.06 17 8 0 9 0 0 0 0 0 0 0
..........TGTCGTGTGGGTCGGCGC.......................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
..............GTGTGGGTCGGCGCGCGTA..................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............TCTTGGGTCGGCGCGCGTAGCGT................................................................................................................................................. 23 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................ATTGATCTGTGCCGACTAAC............................................................................................................... 20 0 10 1.00 10 3 1 3 2 0 0 0 0 0 1
........................................CCTCTGCGTACATTGATCTGT......................................................................................................................... 21 0 9 1.00 9 6 1 0 0 2 0 0 0 0 0
.................TGGGTCGGCGCGCGTAGCGT................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................GGTAGCGGGTGCAATTCGT... 19 0 6 1.00 6 0 6 0 0 0 0 0 0 0 0
.....................................................................................................................................GCGTGGGTTAGCGGACATCCTAAGAG....................... 26 0 4 1.00 4 0 4 0 0 0 0 0 0 0 0
.................TGGGTCGGCGCGCGTAGCGTT................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGTGGGTTAGCGGACATCCTAAGAG....................... 25 0 6 1.00 6 0 6 0 0 0 0 0 0 0 0
..........................................................................................................................ATATAAAGTCTGCGTGGGTT........................................ 20 0 10 1.00 10 9 0 1 0 0 0 0 0 0 0
.......................................TCCTCTGCGTACATTGATCTG.......................................................................................................................... 21 0 9 1.00 9 7 2 0 0 0 0 0 0 0 0
....................................................................................................................................TGCGTGGGTTAGCGGACATCC............................. 21 0 13 0.92 12 12 0 0 0 0 0 0 0 0 0
...............................................GTACATTGATCTGTGCCGACT.................................................................................................................. 21 0 9 0.89 8 6 0 0 0 0 1 1 0 0 0
..............................................................................GTCCGGTGTCGAGGTGTCT..................................................................................... 19 0 16 0.88 14 4 4 5 1 0 0 0 0 0 0
..........................GCGCGTAGCGTTTTCCTCTGC....................................................................................................................................... 21 0 20 0.85 17 12 1 0 4 0 0 0 0 0 0
..CCGCTGGTGGTCGTGTGGGT................................................................................................................................................................ 20 0 20 0.85 17 11 3 0 2 1 0 0 0 0 0
.............................................................GCCGACTAACACGACGTGTC..................................................................................................... 20 0 18 0.83 15 10 4 1 0 0 0 0 0 0 0
....................................................TTGATCTGTGCCGACTAACAC............................................................................................................. 21 0 11 0.82 9 5 0 3 0 0 1 0 0 0 0
..........................................................................ACGTGTCCGGTGTCGAGGT......................................................................................... 19 0 16 0.81 13 11 0 2 0 0 0 0 0 0 0
..................................................CATTGATCTGTGCCGACTAA................................................................................................................ 20 0 10 0.80 8 8 0 0 0 0 0 0 0 0 0
...............................................................................................................................AAGTCTGCGTGGGTTAGCGG................................... 20 0 10 0.80 8 7 1 0 0 0 0 0 0 0 0
...........................................................................CGTGTCCGGTGTCGAGGTG........................................................................................ 19 0 16 0.75 12 7 2 1 0 1 0 0 0 0 1
.....CTGGTGGTCGTGTGGGTC............................................................................................................................................................... 18 0 20 0.75 15 10 3 0 2 0 0 0 0 0 0
.................................................................................................................CCTACGCAAATATAAAGTCTG................................................ 21 0 10 0.70 7 0 0 5 0 1 0 0 0 1 0
................................................TACATTGATCTGTGCCGACTA................................................................................................................. 21 0 9 0.67 6 4 1 1 0 0 0 0 0 0 0
................................................................GACTAACACGACGTGTCCGGT................................................................................................. 21 0 17 0.65 11 0 1 10 0 0 0 0 0 0 0
..............................GTAGCGTTTTCCTCTGCGTA.................................................................................................................................... 20 0 19 0.63 12 8 1 0 2 0 1 0 0 0 0
..................................................................................................................................TCTGCGTGGGTTAGCGGACAT............................... 21 0 10 0.60 6 6 0 0 0 0 0 0 0 0 0
............................GCGTAGCGTTTTCCTCTGC....................................................................................................................................... 19 0 20 0.60 12 5 4 0 2 0 1 0 0 0 0
..................................................................................................................................TCTGCGTGGGTTAGCGGACATC.............................. 22 0 10 0.60 6 6 0 0 0 0 0 0 0 0 0
...............................................................................................................................AAGTCTGCGTGGGTTAGCGGA.................................. 21 0 10 0.60 6 1 1 3 1 0 0 0 0 0 0
.............................................................................................................................TAAAGTCTGCGTGGGTTAGC..................................... 20 0 10 0.60 6 2 1 3 0 0 0 0 0 0 0
...TGCTGGTGGTCGTGTGGGTC............................................................................................................................................................... 20 1 20 0.55 11 11 0 0 0 0 0 0 0 0 0
....................................................TTGATCTGTGCCGACTAACA.............................................................................................................. 20 0 11 0.55 6 5 0 1 0 0 0 0 0 0 0
......................................................................................................................GCAAATATAAAGTCTGCGTGGGTTAGC..................................... 27 0 10 0.50 5 0 0 5 0 0 0 0 0 0 0
....GCTGGTGGTCGTGTGGGT................................................................................................................................................................ 18 0 20 0.50 10 6 2 1 0 1 0 0 0 0 0
..........................GCGCGTAGCGTTTTCCTCTG........................................................................................................................................ 20 0 20 0.50 10 5 3 0 1 0 0 1 0 0 0
...........................................................................................................................TATAAAGTCTGCGTGGGTTAA...................................... 21 1 10 0.50 5 3 0 2 0 0 0 0 0 0 0
.....CTGGTGGTCGTGTGGGTCG.............................................................................................................................................................. 19 0 20 0.50 10 7 2 1 0 0 0 0 0 0 0
....GCTGGTGGTCGTGTGGGTCG.............................................................................................................................................................. 20 0 20 0.50 10 9 1 0 0 0 0 0 0 0 0
................................................................................................................................................................GGTAGCGGGTGCAATTCGTT.. 20 0 6 0.50 3 0 3 0 0 0 0 0 0 0 0
..........................................................................................................................................GGTTAGCGGACATCCTAAGA........................ 20 0 6 0.50 3 0 3 0 0 0 0 0 0 0 0
...............................................GTACATTGATCTGTGCCGAC................................................................................................................... 20 0 9 0.44 4 3 0 1 0 0 0 0 0 0 0
...................................GTTTTCCTCTGCGTACATT................................................................................................................................ 19 0 14 0.43 6 1 3 2 0 0 0 0 0 0 0
....................................TTTTCCTCTGCGTACATTGA.............................................................................................................................. 20 0 14 0.43 6 5 0 1 0 0 0 0 0 0 0
...CGCTGGTGGTCGTGTGGGT................................................................................................................................................................ 19 0 20 0.40 8 4 2 0 2 0 0 0 0 0 0
.................................................................................................................CCTACGCAAATATAAAGTCT................................................. 20 0 10 0.40 4 1 0 0 0 1 2 0 0 0 0
............................................................................................................................ATAAAGTCTGCGTGGGTTA....................................... 19 0 10 0.40 4 2 0 2 0 0 0 0 0 0 0
............................GCGTAGCGTTTTCCTCTGCGT..................................................................................................................................... 21 0 20 0.40 8 2 1 3 2 0 0 0 0 0 0
.............................................................................TGTCCGGTGTCGAGGTGTCT..................................................................................... 20 0 16 0.38 6 4 0 1 1 0 0 0 0 0 0
........................................................................CGACGTGTCCGGTGTCGAGGTG........................................................................................ 22 0 16 0.38 6 0 0 5 0 0 0 0 0 1 0
.............................................................................TGTCCGGTGTCGAGGTGTC...................................................................................... 19 0 16 0.38 6 4 0 2 0 0 0 0 0 0 0
...........................CGCGTAGCGTTTTCCTCTGC....................................................................................................................................... 20 0 20 0.35 7 3 0 0 3 1 0 0 0 0 0
...CGCTGGTGGTCGTGTGGGTCG.............................................................................................................................................................. 21 0 20 0.35 7 3 1 2 0 1 0 0 0 0 0
..............................................CGTACATTGATCTGTGCCGAC................................................................................................................... 21 0 9 0.33 3 2 0 0 1 0 0 0 0 0 0
...............................TAGCGTTTTCCTCTGCGTACA.................................................................................................................................. 21 0 15 0.33 5 4 0 0 0 0 0 1 0 0 0
...........................................................................................................................................GTTAGCGGACATCCTAAGAG....................... 20 0 6 0.33 2 0 1 0 0 0 0 0 0 1 0
............................................................................................................................................TTAGCGGACATCCTAAGAGCGGTA.................. 24 0 6 0.33 2 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................TGGTAGCGGGTGCAATTCGT... 20 1 6 0.33 2 0 1 0 0 0 0 1 0 0 0
............................................................TGCCGACTGACACGACGTGTC..................................................................................................... 21 1 18 0.33 6 4 0 0 1 0 0 1 0 0 0
.....................................TTTCCTCTGCGTACATTGATC............................................................................................................................ 21 0 12 0.33 4 4 0 0 0 0 0 0 0 0 0
......................................................................................................................................CGTGGGTTAGCGGACATCCTAAGA........................ 24 0 6 0.33 2 0 2 0 0 0 0 0 0 0 0
.........................................................................................................................................GGGTTAGCGGACATCCTAAGAGTT..................... 24 2 6 0.33 2 0 0 2 0 0 0 0 0 0 0
...........................................CTGCGTACATTGATCTGTGC....................................................................................................................... 20 0 9 0.33 3 1 0 0 2 0 0 0 0 0 0
...............................................................................................................................................................CGGTAGCGGGTGCAATTCG.... 19 0 6 0.33 2 0 2 0 0 0 0 0 0 0 0
TTTTGCTGGTGGTCGTGTGGGTC............................................................................................................................................................... 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................GTGGGTTAGCGGACATCCTAAGA........................ 23 0 6 0.33 2 0 2 0 0 0 0 0 0 0 0
...........................................CTGCGTACATTGATCTGTGCC...................................................................................................................... 21 0 9 0.33 3 3 0 0 0 0 0 0 0 0 0
................................................................................................................GCCTACGCAAATATAAAGTC.................................................. 20 0 16 0.31 5 0 0 4 0 0 1 0 0 0 0
...........................................................................TGTGTCCGGTGTCGAGGTGT....................................................................................... 20 1 16 0.31 5 2 0 2 0 0 0 1 0 0 0
..........................................................TGTGCCGACTAACACGACGTG....................................................................................................... 21 0 13 0.31 4 1 2 0 0 0 0 1 0 0 0
............................................................................................................................ATAAAGTCTGCGTGGGTTAG...................................... 20 0 10 0.30 3 3 0 0 0 0 0 0 0 0 0
...........................................................................................................................TATAAAGTCTGCGTGGGTTAG...................................... 21 0 10 0.30 3 3 0 0 0 0 0 0 0 0 0
...............................................................................................................................AAGTCTGCGTGGGTTAGCG.................................... 19 0 10 0.30 3 1 0 2 0 0 0 0 0 0 0
..............................GTAGCGTTTTCCTCTGCGT..................................................................................................................................... 19 0 20 0.30 6 5 1 0 0 0 0 0 0 0 0
..................................................................................................................CTACGCAAATATAAAGTCTG................................................ 20 0 10 0.30 3 1 0 2 0 0 0 0 0 0 0
...................................................................................................................................CTGCGTGGGTTAGCGGGCATC.............................. 21 1 10 0.30 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TTTGCCTACGCAAATATAAAGTCT................................................. 24 0 10 0.30 3 0 0 3 0 0 0 0 0 0 0
..................................................................................................................................CCTGCGTGGGTTAGCGGACATC.............................. 22 1 10 0.30 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................................GCAAATATAAAGTCTGCGTG............................................ 20 0 10 0.30 3 2 0 0 0 0 1 0 0 0 0
............................................................................................................................ATAAAGTCTGCGTGGGTTAAC..................................... 21 1 10 0.30 3 3 0 0 0 0 0 0 0 0 0
................................................................................................................................AGTCTGCGTGGGTTAGCGGA.................................. 20 0 10 0.30 3 2 0 0 1 0 0 0 0 0 0
...................................................................................................................TACGCAAATATAAAGTCTGC............................................... 20 0 11 0.27 3 0 0 3 0 0 0 0 0 0 0
.....................................TTTCCTCTGCGTACATTGAT............................................................................................................................. 20 0 12 0.25 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................................................TGCGTGGGTTAGCGGACATCCTAAGA........................ 26 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................GCGTGGGTTAGCGGACATCCTAAGAGC...................... 27 0 4 0.25 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................TGCGTGGGTTAGCGGACATCCTAAGAG....................... 27 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...........................................................................TGTGTCCGGTGTCGAGGTGTC...................................................................................... 21 1 16 0.25 4 3 0 0 0 1 0 0 0 0 0
......................................................................................TCGAGGTGGCTACGGGTGT............................................................................. 19 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................TGCGTGGGTTAGCGGACATCCT............................ 22 0 13 0.23 3 2 1 0 0 0 0 0 0 0 0
...........................................................GTGCCGACTAACACGACGTGT...................................................................................................... 21 0 13 0.23 3 0 0 1 0 2 0 0 0 0 0
.........................................CTCTGCGTACATTGATCTGT......................................................................................................................... 20 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
.................................................ACATTGATCTGTGCCGACTA................................................................................................................. 20 0 9 0.22 2 1 0 0 0 0 0 1 0 0 0
...............................................TTACATTGATCTGTGCCGACTA................................................................................................................. 22 1 9 0.22 2 1 0 0 0 1 0 0 0 0 0
...........................................................CTGCCGACTAACACGACGTGTC..................................................................................................... 22 1 18 0.22 4 2 0 1 1 0 0 0 0 0 0
.........................................................................................................................AATATAAAGTCTGCGTGGGTTAGCG.................................... 25 0 10 0.20 2 0 0 2 0 0 0 0 0 0 0
..............................................................................................................................AAAGTCTGCGTGGGTTAGC..................................... 19 0 10 0.20 2 1 0 1 0 0 0 0 0 0 0
................................................................................................................................AGTCTGCGTGGGTTAGCGG................................... 19 0 10 0.20 2 1 0 1 0 0 0 0 0 0 0
...................................................ATTGATCTGTGCCGACTAACA.............................................................................................................. 21 0 10 0.20 2 0 0 0 0 2 0 0 0 0 0
.............................................................................................................................TAAAGTCTGCGTGGGTTAG...................................... 19 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................CTTAAAGTCTGCGTGGGTTAGCG.................................... 23 2 10 0.20 2 0 0 2 0 0 0 0 0 0 0
.CCCGCTGGTGGTCGTGTGGGT................................................................................................................................................................ 21 0 20 0.20 4 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................GTCTGCGTGGGTTAGCGGAC................................. 20 0 10 0.20 2 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................AAAGTCTGCGTGGGTTAGCGG................................... 21 0 10 0.20 2 1 0 1 0 0 0 0 0 0 0
..............................CTAGCGTTTTCCTCTGCGTACA.................................................................................................................................. 22 1 15 0.20 3 3 0 0 0 0 0 0 0 0 0
....TCTGGTGGTCGTGTGGGTC............................................................................................................................................................... 19 1 20 0.20 4 2 1 0 1 0 0 0 0 0 0
.........................................................................................................................AATATAAAGTCTGCGTGGGTTA....................................... 22 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................CTGCGTGGGTTAACGGACATC.............................. 21 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.............................................................................................................................AAAAGTCTGCGTGGGTTAGC..................................... 20 1 10 0.20 2 0 0 2 0 0 0 0 0 0 0
.............................................................................................................................TAAAGTCTGCGTGGGTTAGCG.................................... 21 0 10 0.20 2 1 0 1 0 0 0 0 0 0 0
..................................CGTTTTCCTCTGCGTACAT................................................................................................................................. 19 0 15 0.20 3 2 0 1 0 0 0 0 0 0 0
...........................................................................................................................AATAAAGTCTGCGTGGGTTAGC..................................... 22 1 10 0.20 2 1 0 1 0 0 0 0 0 0 0
...................................................ATTGATCTGTGCCGACTAA................................................................................................................ 19 0 10 0.20 2 0 1 1 0 0 0 0 0 0 0
..........................................................................ACGTGTCCGGTGTCGAGGTGTC...................................................................................... 22 0 16 0.19 3 3 0 0 0 0 0 0 0 0 0
........................................................................CGACGTGTCCGGTGTCGAG........................................................................................... 19 0 16 0.19 3 0 1 0 0 1 1 0 0 0 0
..............................................................................................................TTGCCTACGCAAATATAAAGT................................................... 21 0 16 0.19 3 1 0 0 0 2 0 0 0 0 0
.........................................................................TTTGTGTCCGGTGTCGAGGTGTC...................................................................................... 23 3 16 0.19 3 0 0 3 0 0 0 0 0 0 0
..........................................................................................................AAGTTTGCCTACGCAAATATA....................................................... 21 0 16 0.19 3 0 0 3 0 0 0 0 0 0 0
...............................................................................................................TGCCTACGCAAATATAAAGTC.................................................. 21 0 16 0.19 3 2 0 1 0 0 0 0 0 0 0
....................................................................................................................ACGCAAATATAAAGTCTGCGT............................................. 21 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
....................................................TTGATCTGTGCCGACTAACGC............................................................................................................. 21 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.......................................................ATCTGTGCCGACTAACACGAC.......................................................................................................... 21 0 11 0.18 2 0 1 0 1 0 0 0 0 0 0
.............................................................GCCGACTAACACGACGTGTCC.................................................................................................... 21 0 17 0.18 3 2 0 0 0 1 0 0 0 0 0
..................................................................CTAACACGACGTGTCCGGT................................................................................................. 19 0 17 0.18 3 0 1 1 0 1 0 0 0 0 0
................................................................................................................................................................GGTAGCGGGTGCAATTCGTTC. 21 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................TGGGTTAGCGGACATCCTAAG......................... 21 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................AAGAGCGGTAGCGGGTGCAATTCGT... 25 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................CGTGGGTTAGCGGACATCCTAA.......................... 22 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................GTGGGTTAGCGGACATCCTAAG......................... 22 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................GGGTTAGCGGACATCCTAAGAGC...................... 23 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................TGGGTTAGCGGACATCCTAAGAGGGCC................... 27 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................ATCCTAAGGGCGATAGCGGTTGC.......... 23 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................AAGAGCGGTAGCGGGTGCAAT....... 21 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................GGTAGCGGGTGCAATTCG.... 18 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................AAAGGTTAGCGGACATCCTAAGAG....................... 24 3 6 0.17 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................GGTTAGCGGACATCCTAAG......................... 19 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................GGGGGTTAGCGGACATCCTAAGAG....................... 24 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
........................................CCTCTGCGTACATTGATCTTT......................................................................................................................... 21 1 12 0.17 2 0 0 0 0 1 0 0 0 1 0
........................................................................................................................................AGGGTTAGCGGACATCCTAAGAG....................... 23 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................AAGGGTTAGCGGACATCCTAAGAG....................... 24 2 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................GGACATCCTAAGAGCGGTAGCGGGT............ 25 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................AGGTAGCGGGTGCAATTCGT... 20 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................CGGGTTAGCGGACATCCTAAGAG....................... 23 1 6 0.17 1 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................TTGGGTTAGCGGACATCCTAAGAG....................... 24 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................CCTAAGAGCGGTAGCGGGTGCAAT....... 24 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................CGGTAGCGGGTGCAAT....... 16 0 6 0.17 1 0 0 0 0 0 0 0 1 0 0
....................................TTTTCCTCTGCGTACATTGAT............................................................................................................................. 21 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CGGTAGCGGGTGCAATTCGTT.. 21 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................TTGGGTTAGCGGACATCCTAAGA........................ 23 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................CGGACATCCTAAGAGCGG.................... 18 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................ATGGGTTAGCGGACATCCTAAGAG....................... 24 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................TTAGCGGACATCCTAAGAGCGG.................... 22 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................GAGCGGTAGCGGGTGCAATTCGT... 23 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................TGCGTGGGTTAGCGGACGTC.............................. 20 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................TGCGTGGGTTAGCGGGCATCC............................. 21 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0
..CCGCTGGTGGTCGTGTGGG................................................................................................................................................................. 19 0 20 0.15 3 2 1 0 0 0 0 0 0 0 0
..........................GCGCGTAGCGTTTTCCTCT......................................................................................................................................... 19 0 20 0.15 3 0 2 0 1 0 0 0 0 0 0
...........................CGCGTAGCGTTTTCCTCTG........................................................................................................................................ 19 0 20 0.15 3 0 3 0 0 0 0 0 0 0 0
.......................................................................................................................................GTGGGTTAGCGGACATCCT............................ 19 0 20 0.15 3 0 0 2 0 0 1 0 0 0 0
............................GCGTAGCGTTTTCCTCTG........................................................................................................................................ 18 0 20 0.15 3 0 2 0 1 0 0 0 0 0 0
............................GCGTAGCGTTTTCCTCTGCG...................................................................................................................................... 20 0 20 0.15 3 2 1 0 0 0 0 0 0 0 0
..CCGCTGGTGGTCGTGTGGTT................................................................................................................................................................ 20 1 20 0.15 3 0 0 0 0 2 0 0 0 1 0
TTCCGCTGGTGGTCGTGCG................................................................................................................................................................... 19 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0
..............................GTAGCGTTTTCCTCTGCGTACAT................................................................................................................................. 23 0 15 0.13 2 1 1 0 0 0 0 0 0 0 0
...............................AAGCGTTTTCCTCTGCGTACAT................................................................................................................................. 22 1 15 0.13 2 2 0 0 0 0 0 0 0 0 0
..............................GTAGCGTTTTCCTCTGCATAC................................................................................................................................... 21 1 16 0.13 2 2 0 0 0 0 0 0 0 0 0
...........................................................................TGTGTCCGGTGTCGAGGTG........................................................................................ 19 1 16 0.13 2 1 1 0 0 0 0 0 0 0 0
..................................................................................................CGCGTGGGAAGTTTGCCTAC................................................................ 20 2 16 0.13 2 2 0 0 0 0 0 0 0 0 0
..............................................................................GTCCGGTGTCGAGGTGTC...................................................................................... 18 0 16 0.13 2 0 2 0 0 0 0 0 0 0 0
....................................................................................................................................................GATCCTAAGGGCGATAGCGG.............. 20 3 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.....................................................................ACACGACGTGTCCGGTGTCGAGGTGTCT..................................................................................... 28 0 16 0.13 2 1 0 1 0 0 0 0 0 0 0
.......................................................................ACGACGTGTCCGGTGTCGAG........................................................................................... 20 0 16 0.13 2 0 2 0 0 0 0 0 0 0 0
.........................................................................GACGTGTCCGGTGTCGAGGTGT....................................................................................... 22 0 16 0.13 2 1 0 1 0 0 0 0 0 0 0
........................................................................TGACGTGTCCGGTGTCGAGGT......................................................................................... 21 1 16 0.13 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................AAAGTTTGCCTACGCAAATAT........................................................ 21 0 16 0.13 2 0 1 1 0 0 0 0 0 0 0
........................................................................AAACGTGTCCGGTGTCGAGGTG........................................................................................ 22 2 16 0.13 2 0 0 2 0 0 0 0 0 0 0
..........................................................................CTGTGTCCGGTGTCGAGGTG........................................................................................ 20 2 17 0.12 2 2 0 0 0 0 0 0 0 0 0
...............................................................CGACTAACACGACGTGTCCGGT................................................................................................. 22 0 17 0.12 2 0 0 2 0 0 0 0 0 0 0
..............................................................CCGACTAACACGACGTGTCC.................................................................................................... 20 0 17 0.12 2 0 1 0 0 1 0 0 0 0 0
..........................................CCTGCGTACATTGATCTGTTC....................................................................................................................... 21 2 9 0.11 1 0 0 0 0 1 0 0 0 0 0
...........................................CTGCGTACATTGATCTGTG........................................................................................................................ 19 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
........................................CCTCTGCTTACATTGATCTGT......................................................................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
........................................CCTCTGCGTACATTGATCTGTGC....................................................................................................................... 23 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..........................................TCTGCGTACATTGATCTGTG........................................................................................................................ 20 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.................................................ACATTGATCTGTGCCGACTAAC............................................................................................................... 22 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
...............................................GTACATTGGTCTGTGCCGACT.................................................................................................................. 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.........................................CTCTGCGTACATTGATCTGTGC....................................................................................................................... 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.......................................TCCTCTGCGTACATTGGTCTG.......................................................................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
........................................CCTCTGCGTACATTGATCGG.......................................................................................................................... 20 1 9 0.11 1 0 0 0 0 1 0 0 0 0 0
..............................................................CCGACTAACACGACGTGTC..................................................................................................... 19 0 18 0.11 2 0 0 0 0 2 0 0 0 0 0
..........................................TCTGCGTACATTGATCTGGGC....................................................................................................................... 21 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0
...............................................GTACATTGATCTGTGCCG..................................................................................................................... 18 0 9 0.11 1 0 0 0 0 0 1 0 0 0 0
.............................................GCGTACATTGATCTGTGCCGA.................................................................................................................... 21 0 9 0.11 1 0 0 1 0 0 0 0 0 0 0
.................................................ACATTTATCTGTGCCGACTAA................................................................................................................ 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
................................................TACATTGATCTGTGCCGAATA................................................................................................................. 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
........................................TCTCTGCGTACATTGATCTG.......................................................................................................................... 20 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
............................................TGCGTACATTGATCTGTGC....................................................................................................................... 19 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..........................................TCTGCGCACATTGATCTGTGC....................................................................................................................... 21 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0
..................................................................................................CGCGTGGGGAGTTTGCCTAC................................................................ 20 3 18 0.11 2 0 0 0 1 1 0 0 0 0 0
..............................................CGTACATTGGTCTGTGCCGAC................................................................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..........................................ACTGCGTACATTGATCTGTG........................................................................................................................ 20 1 9 0.11 1 0 0 1 0 0 0 0 0 0 0
........................................CCTCTGCGTACATTGATCTGTG........................................................................................................................ 22 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
.........................................CTCTGCGTACATTGATCTG.......................................................................................................................... 19 0 9 0.11 1 0 0 0 1 0 0 0 0 0 0
........................................TCTCTGCGTACATTGATCTGTG........................................................................................................................ 22 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0
...........................................TTGCGTACATTGATCTGTG........................................................................................................................ 19 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..........................................TCTGCGTACATTGATCCGTGC....................................................................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..............................................CGTACATTGGTCTGTGCCGA.................................................................................................................... 20 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0
.........................................GTCTGCGTACATTGGTCTGTG........................................................................................................................ 21 2 9 0.11 1 0 0 0 1 0 0 0 0 0 0
................................................TACATTGATCTGTGCCGACT.................................................................................................................. 20 0 9 0.11 1 0 1 0 0 0 0 0 0 0 0
.............................CGTAGCGTTTTCCTCTGCGTA.................................................................................................................................... 21 0 19 0.11 2 1 0 0 1 0 0 0 0 0 0
............................GCGTAGCGTTTTCCTCTGCGTA.................................................................................................................................... 22 0 19 0.11 2 0 1 1 0 0 0 0 0 0 0
..........................................................................................................................TTATAAAGTCTGCGTGGGTTAG...................................... 22 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................GTCTGCATGGGTTAGCGGAC................................. 20 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................TTTAAAGTCTGCGTGGGTTAGCG.................................... 23 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
..................................................................................................................................TCTGCGTGGGTTAGCGGACA................................ 20 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............................GCGTGGCGTTTTCCTCTGCGT..................................................................................................................................... 21 1 20 0.10 2 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................TTATAAAGTCTGCGTGGGTT........................................ 20 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................GTAAAGTCTGCGTGGGTTA....................................... 19 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................................................AATTGATCTGTGCCGACTAACA.............................................................................................................. 22 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................CGCGAATATGAAGTCTGCGTG............................................ 21 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................CTAAAGTCTGCGTGGGTTAGCG.................................... 22 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................AAAAAAAGTCTGCGTGGGTTAGC..................................... 23 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0
................................................................................................................................TGTCTGCGTGGGTTAGCGG................................... 19 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................CTATAAAGTCTGCGTGGGTTA....................................... 21 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................CGTGGGTTAGCGGACATC.............................. 18 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0
........................................................................................................................AAATATAAAGTCTGCGTGGGTT........................................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.................................................TCATTGATCTGTGCCGACTAA................................................................................................................ 21 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................GTAAAGTCTGCGTGGGTTAGC..................................... 21 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................AAAAGTCTGCGTGGGTTAGCGGACAT............................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................AAGTCTGCGTGGGTTAGCGGACATCCT............................ 27 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................GCCTACGCAAGTATGAAGTCT................................................. 21 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0
..CTGCTGGTGGTCGTGTGGGT................................................................................................................................................................ 20 1 20 0.10 2 0 0 1 1 0 0 0 0 0 0
......................................................................................................................GTAAATATAAAGTCTGCGTG............................................ 20 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................GTTTGCCTACGCAAATATAAAGTCTGCGT............................................. 29 0 10 0.10 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................CAAATATAAAGTCTGCGTGGGTT........................................ 23 0 10 0.10 1 0 0 1 0 0 0 0 0 0 0
....TTTGGTGGTCGTGTGGGTC............................................................................................................................................................... 19 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.......................................TCCTCTGCGTTCATTGATCTG.......................................................................................................................... 21 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................TTCTGCGTGGGTTAGCGGACAT............................... 22 1 10 0.10 1 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................AATATAAAGTCTGCGTGGGTTAGC..................................... 24 0 10 0.10 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................ATATAAAGTCTGCGGGGGTT........................................ 20 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.............................CGTAGCGTTTTCCTCTGCGT..................................................................................................................................... 20 0 20 0.10 2 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................CTGCGTGGGTTAGCTGACATC.............................. 21 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................CCTGCGTGGGTTAGCGGACA................................ 20 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................AAATATAAAGTCTGCGTGGGTTA....................................... 23 0 10 0.10 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................TCCTGCGTGGGTTAGCGGACAT............................... 22 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AGTCTGCGTGGGTTAACGGAC................................. 21 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCTGCGTGGGTTAACGGACAT............................... 21 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................TGTCTGCGTGGGTTAGCGGACA................................ 22 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................CTGCGTGGGTTAGCGGACATCC............................. 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................TTGTCTGCGTGGGTTAGCGG................................... 20 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................CCTGCGTGGGTTAGCGGACAT............................... 21 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................AGTCTGCGTGGGTTAGCG.................................... 18 0 10 0.10 1 0 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1e:1163817-1163998 + dps_2617 AGGGCGACCA----------------C---CAGCACACCCAGCCGCGCGCATCGCAAAAGGAGACGCATGTAACTA-GACACGGCTGATTGTGC--TGCACAGG-------------CCACAGCTCCACA------GA-TGCGCACATTTCAAA-CGGATG---CGT---TTATA---------------------------------TTTCAGACGCACCCAATCGCCTGTAGGATTCTCGCCAT---------CGCC---CACGTTAAGCAAGC
droPer2 scaffold_30:31124-31305 - GGGGCGACCA----------------C---CAGCACACCCAGCCGCGCGCATCGCAAAAGGAGACGCATGTAACTA-GACACGGCTGATTGTGC--TGCACAGG-------------CCACAGCTCCACA------GA-CGCGCACATTTCAAA-CGGATG---CGT---TTATA---------------------------------TTTCAGACGCACCCAATCGCCTGTAGGATTCTCGCCAT---------CGCC---CACGTTAAGCAAGC
droWil2 scf2_1100000004909:7480699-7480854 + GATGTAGAGA----------------C---AGAGACAGAAGG---CCCTACGCGTAAAAGGAAGCACATGTAAGGT-TAACTAA----TT---GAC------TTACTCAA-----CT-------------------GG-AAATTATATTTTGTT------TGGATTT--TTTTCT---------------------------------CTTCAGACGTACCCAACACTCG----ACAC-----CTT---------CGCCTCCTGGTTTATGTAAAC
droVir3 scaffold_12970:7558066-7558244 - ACAGCGCCAGTATGCAAAATGCGAG--------CTCAAA------CAAGCAGCGCAAGAGACGACGCATGTAAGTTATATACCA----TTGC-CCC------GGGC--------------ACGTTTTTC-----C-AACAATTTATTTAATGAT------TGTTTCG---CCAGG---------------------------------GATGAGGAACACGCGAACTCGGTT-------TCACCATCGCCAACGAAACA---TGCTGCCCGCAAGC
droMoj3 scaffold_6482:2162875-2163054 + AATACGAATC----------------C---CAATACACAACA---C---ACACGTAAGAGACGCCGCGTGTAAGTA-GT---TT----TA---AAT------TTACATTT---TTTC-------------------AG-AAGGTAC--TC----------ACTGCTT---TTAATACTAGACGCGTAAATTCATTGCCATTGGATGGAGAGCAGGCGAACCCAGTCCCACG--A-----------TCACCCTCAGAGCG---TTTTAACTGTAAAC
droGri2 scaffold_15203:7054518-7054576 + ACACTGCCTG-CCAG-----C-GAAAT-GCTAATTCAAA------TACGCAGCGCAAGAGGCGACGCACGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13047:998984-999159 - AGAGCAGCACAACGG-----GAGAGGCCAGCAATTCGCA------TTCTCATAGGAAGCGAATGCGACGGTAATTC-GG--------------------ACGGA-------------TTGCTATTTCTTAGGTTTCAC-ATATTATATTGTGAT------GTGTTCT---CCGTT---------------------------------TCTCAGACGCACACAATCGCCGGTGGACACCCTATCCT---------CGCC---TTCCAATAGCAAGC
droBip1 scf7180000396431:773435-773606 - AGAGCAGCACTACAG-----GAGAGCCCAGCAATTCGCA------TTCTCATAGGAAACGAATGCACCGGTAAT-A-TGGATTT----CT---ATT------TCTTA----TGTTTC-------------------GC-AAATTATATTCTGAT------GTTTTAT---CTGTT---------------------------------TTTCAGACACACTCAATCCCCGTTGGACACCTTATCCT---------CGCC---TTCCCTTAGCAAGC
droKik1 scf7180000302704:122133-122289 + GAGGTGGCC-----------------------CATCCCA------GGCGCACCGAAAGCGGAGGCGCTTGTAATTA-TGGATTT----TG---CC-------TGTCAGTATGACAGC-------------------AC-GAAGCTAATTTTCCC------TTTTTAA---A-TCT---------------------------------TAACAGATCCACTCAATCCCCGGGGGACTACTTGTCGT---------CGCC---TTCCTTCAGCAAGC
droFic1 scf7180000454073:2049574-2049743 - AAAACAGCACTCCGA-----AAGAACCCAGGACCTCGCA------GTCGCATCGCAAGAGGAGGCGCTTGTAATTA-TGGAATT----CT---CAC------AT----AA-----CC-GAAAACCT---------------CTCTCAC-G----------TTTACCTTTTCCATT---------------------------------CCGCAGACGCACCCAATCCCCAGTGAACAGCCTCTCCT---------CACC---CTCGTTTAGCAAGC
droEle1 scf7180000491018:136128-136300 + AGGGTCCC--------------GAGTCCAGCATATCGCA------GTCGCATCGCAAGAGGAGGCGCTTGTAATTA-TATCT----------------------------ACACATTGGGAAGTTCCTA-------AG-AACTCTCAT-GTTTACTGATCA---TGA---TTATT--------------------ATCCCT-------CCACAGACGCACTCAATCCCCCGGAAATAACCTGTCCT---------CGCC---TTCGTTCAGCAAGC
droRho1 scf7180000779966:30445-30596 - AGGGC-----------------GAACCAAGCATATCGCT------GTCGCAACGCAAGA---GGCGCTTGTAATTA-TGCATTG----TT---ATC------AT-----------TC-GGAAACTCCTC-------AA-AA--CTCACTG----------TTCACCC---CCCT----------------------------------TTCTAGACGCACTCATTCCCCCGTAAACAGCCTG---A---------CGCC---TTCGTTCAGCAAGC
droBia1 scf7180000301760:5106198-5106357 - CAGGC-----------------GAGCCCAGCATATCGCA------GTCGCATCGCAAGAGGAGGCGCTTGTAAATA-TGGATTT----TT---CCC------C-----------ATCCGACAGT---------------GCCTTACATTGTCCA------CTTACCA---CTTTT-----------------------C---------CTCTAGACGCACCCAGTCGCCCGTGAACAGCATGTCCT---------CGCC---CTCGTTCAGCAAGC
droTak1 scf7180000415696:91825-91875 - GGC-------------------GAGCCCACCATCGCACC------GTCGCATCGCAAGAGGAGGCGCCTGTAAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409032:824967-825140 + AGAGCAACACCCCAG-----GCGAGCCCAGCATATCACA------GTCTGATCGCAAAAGAAGGCGCTTGTAAT----ATATTT----TT---GGC------TTCCGTAAACCGCTC-------------------AG-AGTTCACATTGTTTG------TTTACCC---CTTTT---------------------------------TCCTAGGCGTACGCAATCTCCTGTGAATAGCATGTCCT---------CGCC---TTCATTCAGCAAAA
dm3 chrX:9136609-9136785 - AAAGCAGCACCCCAG-----GCGAGCCCACCATATCACA------GTCGCATCGCAAGAGAAGGCGCTTGTAATTA-TAGATTT----TT---CCT------TGACACAAGCACATC-------------------GG-AATTCTCATTGCTCT------CTTACCC---CTTTT---------------------------------CCCCAGGCGCACCCATTCTCCCGTGAACAGCATTTCTT---------CGCC---TTCGTTTAGCAAGC
droSim2 x:8682736-8682912 - AAAGCAGCACCCCAG-----GCGAGCCCACCATATCGCA------GTCGCATCGCAAGAGAAGGCGCTTGTAATTA-TAGATTT----TT---CCT------TGACACAACCACATC-------------------GG-AATTCTCATTGCTCT------CTTACCC---CTGTT---------------------------------CCCCAGACGCACCCATTCTCCCGTGAACAGCATTTCTT---------CGCC---TTCGTTTAGCAAGC
droSec2 scaffold_68:24322-24498 - AAAGCAGCACCCCAG-----GCGAGCCCACCATATCGCA------GTCGCATCGCAAGAGAAGGCGCTTGTAATTA-TAGATTT----TT---CCT------TGACACAAACAAATC-------------------GG-AATTCTCATTGCTCT------CTTACCC---CTGTT---------------------------------CCCCAGACGCACCCATTCTCCCGTGAACAGCATTTCTT---------CGCC---TTCGTTTAGCAAGC
droYak3 X:17732705-17732869 - CAGGC-----------------GAGACCATCATATCGCA------GTCGCATCGCAAGAGAAGGCGCTTGTAATTA-TAGATTT----TT---CCC------TGACACAAATACATC-------------------TG-AATTCTCATTGCTTT------CTTACCC---TTGTT---------------------------------CCCCAGACGCACCCATTCCCCCGTGAACAGCATTTCCT---------CGCC---TTCGTTCAGCAAGC
droEre2 scaffold_4690:5978681-5978845 + CAGGC-----------------GAAACCACCATATCGCA------GTCGCACCGCAAGAGAAGGCGATTGTAATTA-TAGATTT----TT---CCC------TGACACAAACACATC-------------------GG-AATTCTCATTGCTTT------CTTACCC---CCGTT---------------------------------CCCCAGACGCACCCATTCCCCCGTGAACAGCATTTCCT---------CGCC---TTCGTTCAGCAAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGGGCGACCA----------------C---CAGCACACCCAGCCGCGCGCATCGCAAAAGGAGACGCATGTAACTA-GACACGGCTGATTGTGC--TGCACAGG-------------CCACAGCTCCACA------GA-TGCGCACATTTCAAA-CGGATG---CGT---TTATA---------------------------------TTTCAGACGCACCCAATCGCCTGTAGGATTCTCGCCAT---------CGCC---CACGTTAAGCAAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACGT.........246157.1794308561508105760
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACG..........23647.17283027440200120
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACGTTA.......26643.502610198101005290
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACGTT........25616.509909410100210
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CAC...........22611.837106460000010
........................................................................................................................................................................................................................................AGGATTCTCGCCAT---------CGCC---CACGT.........23610.676406300000100
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGCC---CACGT.........2668.505104330000500
.............................................CGCGCATCGCAAAAGGAGACG..................................................................................................................................................................................................................21206.651331000021470730
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---C.............2066.503903810000000
.................................................CATCGCAAAAGGAGACGCATG..............................................................................................................................................................................................................21166.139813000160870
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CA............2166.003603600000000
..................................................................CATGTAACTA-GACACGGCTGA............................................................................................................................................................................................2195.895301000180421
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGCC---CACG..........2564.832902800100000
...........................................CGCGCGCATCGCAAAAGGAGA....................................................................................................................................................................................................................2114.0040000004000
.......................................................AAAAGGAGACGCATGTAACTA-.......................................................................................................................................................................................................21123.9247000000220250
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCCAT---------CGC..................2563.832301810000400
........................................................................................................................................................................................................................................AGGATTCTCGCCAT---------CGCC---CACG..........2263.672202200000000
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACGTTAA......2763.672202200000000
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACGTTAAG.....2863.672201710000400
......................................................................................................................................................................................................................................GTAGGATTCTCGCCAT---------CGCC---CACGT.........2563.332001910000000
............................................GCGCGCATCGCAAAAGGAGAC...................................................................................................................................................................................................................2113.0030100001010
........................................................................................................................................................................................................................................AGGATTCTCGCCAT---------CGCC---CACGTTA.......2563.001801800000000
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCCAT---------CGCC---..............2663.001801710000000
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---..............1962.831701700000000
..................................................ATCGCAAAAGGAGACGCATGT.............................................................................................................................................................................................................21152.8042000102210180
....................................................CGCAAAAGGAGACGCATGTA............................................................................................................................................................................................................20152.533801000110350
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGCC---C.............2262.501501120000110
......................................................................TAACTA-GACACGGCTGATTGT........................................................................................................................................................................................21102.402400100023000
......................................................................................................................................................................................................................ACGCACCCAATCGCCTGTAGGATTC.....................................2542.2590900000000
.........................................................................................................................................................................................................................CACCCAATCGCCTGTAGGATTCTCGCC................................2762.171301300000000
.............................................................................................................................................................................................................................................TCTCGCCAT---------CGCC---CACGTTAAGCA...2462.171301300000000
.................................................CATCGCAAAAGGAGACGCAT...............................................................................................................................................................................................................20192.164100000000410
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCCAT---------CGCC---C.............2762.001201020000000
....................................................................................................................................................................................................................................CTGTAGGATTCTCGCCAT---------CGCC---CACG..........2662.001201000000200
............................................GCGCGCATCGCAAAAGGAGACG..................................................................................................................................................................................................................2212.0020000000020
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGCC---CA............2362.001201100000100
...........................................CGCGCGCATCGCAAAAGGAG.....................................................................................................................................................................................................................2012.0021000001000
............................................................................................................................................................................................................................................TTCTCGCCAT---------CGCC---CACGTTAAGCA...2561.831101100000000
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGCC---CAC...........2461.831101100000000
....................................................................................................................................................................................................................................CTGTAGGATTCTCGCCAT---------CGCC---..............2261.83110620000300
............................................................................................................................................................................................................................CCAATCGCCTGTAGGATTCTCGCCA...............................2561.831101000000100
....................................................................TGTAACTA-GACACGGCTGATT..........................................................................................................................................................................................2191.781601000040110
.......................................................................AACTA-GACACGGCTGATTGTG.......................................................................................................................................................................................21111.641800000040140
..................................................................CATGTAACTA-GACACGGCTG.............................................................................................................................................................................................2091.56141100024042
....................................................CGCAAAAGGAGACGCATGTAA...........................................................................................................................................................................................................21141.502100000040170
........................................................AAAGGAGACGCATGTAACTA-G......................................................................................................................................................................................................21121.501800000220140
............................................................................................................................................................................................................................CCAATCGCCTGTAGGATTCTCGCC................................2461.5090610000200
.............................................................................................................................................................................................................................CAATCGCCTGTAGGATTCTCGCCA...............................2461.5090900000000
...................................................................ATGTAACTA-GACACGGCTGAT...........................................................................................................................................................................................2191.44130000004090
.....................................................................................................................................................................................................................GACGCACCCAATCGCCTGTAG..........................................21101.401401000000130
......................................................CAAAAGGAGACGCATGTAAC..........................................................................................................................................................................................................20141.361900000030160
....................................................................................CTGATTGTGC--TGCACAGG-------------CC.............................................................................................................................................................20171.352311110100180
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCCAT---------CG...................2461.3380700000010
.........................................................AAGGAGACGCATGTAACTA-G......................................................................................................................................................................................................20121.331600000000160
.............................................CGCGCATCGCAAAAGGAGAC...................................................................................................................................................................................................................20201.302610010050190
....................................................................................CTGATTGTGC--TGCACAGG-------------C..............................................................................................................................................................19171.182003000000170
........................................................................................................................................................................................................................................AGGATTCTCGCCAT---------CGCC---CACGTT........2461.1770700000000
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGCC---..............2161.1770700000000
.........................................................AAGGAGACGCATGTAACTA-GA.....................................................................................................................................................................................................21121.17140000006080
......................................................................................................................................................................................................................................GTAGGATTCTCGCCAT---------CGCC---CACG..........2461.1770700000000
.......................................................................................................................................................................................................................CGCACCCAATCGCCTGTAGGA........................................21191.162205000060110
.................................................................................CGGCTGATTGTGC--TGCACAGG-------------...............................................................................................................................................................21171.12190502021090
................................................................CGCATGTAACTA-GACACGGC...............................................................................................................................................................................................2091.11102000011060
.............................................................AGACGCATGTAACTA-GACACG.................................................................................................................................................................................................2191.11101101004030
.......................................................................AACTA-GACACGGCTGATTGT........................................................................................................................................................................................20111.09120300007020
.........................................................................CTA-GACACGGCTGATTGTGC--T...................................................................................................................................................................................21111.09120000009030
......................................................................................................................................................................................................................ACGCACCCAATCGCCTGTAGG.........................................21131.08140200003090
...............................................CGCATCGCAAAAGGAGACGCA................................................................................................................................................................................................................21201.052100000040170
.........................................GCCGCGCGCATCGCAAAAGGAGACGC.................................................................................................................................................................................................................2611.0010000001000
..................................................................................................................................................ATTTCAAA-CGGATG---CGT---TTATA---------------------------------....................................................................2211.0010000000010
....................................................................................................................................................................................................................................CTGTAGGATTCTCGCCAT---------CGCC---CAC...........2561.0060600000000
..................................ACACCCAGCCGCGCGCATCGC.............................................................................................................................................................................................................................2111.0010000001000
......ACCA----------------C---CAGCACACCCAGCCGCGCGCAT................................................................................................................................................................................................................................2711.0010100000000
........................................AGCCGCGCGCATCGCAAAAGG.......................................................................................................................................................................................................................2111.0010000100000
...........................................CGCGCGCATCGCAAAAGGAGACC..................................................................................................................................................................................................................2311.0010010000000
................................GCACACCCAGCCGCGCGCATC...............................................................................................................................................................................................................................2111.0010000001000
..............................................GCGCATCGCAAAAGGAGACG..................................................................................................................................................................................................................20201.002011000010080
.......................................................................................................................................................................................................................CGCACCCAATCGCCTGTAGG.........................................20191.00190500016070
.....................................................GCAAAAGGAGACGCATGTA............................................................................................................................................................................................................19151.001500000000150
..................................................ATCGCAAAAGGAGACGCATG..............................................................................................................................................................................................................20161.001601000320100
.........................................................................................................................................................................................................................CACCCAATCGCCTGTAGGATTCTCGC.................................2661.0060600000000
...........................................CGCGCGCATCGCAAAAGGAGAC...................................................................................................................................................................................................................2211.0010000000010
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACGC.........2461.0060240000000
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCCAT---------C....................2361.0060310000200
....................................ACCCAGCCGCGCGCATCGC.............................................................................................................................................................................................................................1911.0010001000000
.......................................CAGCCGCGCGCATCGCAAAAGGA......................................................................................................................................................................................................................2311.0010000001000
.........................................................................................................................................................................................................................................GGATTCTCGCCAT---------CGCC---CACGT.........2261.0060600000000
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCCAT---------CGCC---CA............2861.0060500000100
...................................................TCGCAAAAGGAGACGCATGTA............................................................................................................................................................................................................21150.931400010010120
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---A.............2060.8350500000000
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACGTTT.......2660.8350110000300
.........................................................................................................................................................................................................................CACCCAATCGCCTGTAGGATTCTCGCCA...............................2860.8350500000000
....................................................................................................................................................................................................................................CTGTAGGATTCTCGCCAT---------CGCC---CACGT.........2760.8350500000000
......................................................................TAACTA-GACACGGCTGATTG.........................................................................................................................................................................................20100.8080100103030
................................................................................................................................................................................................................TTTCAGACGCACCCAATCGCC...............................................21100.8080100006010
.................................................................GCATGTAACTA-GACACGGC...............................................................................................................................................................................................1990.7870000000070
.....................................................GCAAAAGGAGACGCATGTAAC..........................................................................................................................................................................................................21140.71100000001090
...............................................CGCATCGCAAAAGGAGACGC.................................................................................................................................................................................................................20200.701401000110110
...........................................................................................................................................................CGGATG---CGT---TTATA---------------------------------TTTCAGA.............................................................21100.7070000000070
...............................................CGCATCGCAAAAGGAGACG..................................................................................................................................................................................................................19200.701420000010110
...............................................................................................................................................................................................................................ATCGCCTGTAGGATTCTCGCCAT---------CGC..................2660.6740400000000
.................................................CATCGCAAAAGGAGACGCATGT.............................................................................................................................................................................................................22150.67100000001081
........................................................................................................................................................................................................................................AGGATTCTCGCCAT---------CGCC---CA............2060.6740400000000
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGC.................................1960.6740300000100
.............................................................................................................................................................................................................................................TCTCGCCAT---------CGCC---CACGTTAAGCAAG.2660.6740400000000
.............................................................................................................................................................................................................................................TCTCGCCAT---------CGCC---CACGTTAAGCAAGC2760.6740400000000
............................................................................................................................................................................................................................CCAATCGCCTGTAGGATTCTCGCCAT---------.....................2660.6740100000300
..............................................................................................................................................................................................................................AATCGCCTGTAGGATTCTCGCCA...............................2360.6740200000200
...............................................................................................................................................................................................................................ATCGCCTGTAGGATTCTCGCCAT---------CGCC---C.............2860.6740100000120
........................................................................................................................................................................................................................................AGGATTCTCGCCAT---------CGCC---CAC...........2160.6740400000000
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACGA.........2460.6740210000100
................................................GCATCGCAAAAGGAGACGCA................................................................................................................................................................................................................20200.65130200005060
..........................................................................TA-GACACGGCTGATTGTGC--TG..................................................................................................................................................................................21110.6470101004010
..............................................................GACGCATGTAACTA-GACACGG................................................................................................................................................................................................2190.5650300000020
.............................................................AGACGCATGTAACTA-GACAC..................................................................................................................................................................................................2090.5650000001040
.................................................................GCATGTAACTA-GACACGGCTG.............................................................................................................................................................................................2190.5650100000040
...............................................................ACGCATGTAACTA-GACACGGC...............................................................................................................................................................................................2190.5651000000040
.............................................................AGACGCATGTAACTA-GACACGG................................................................................................................................................................................................2290.5650000000050
............................................................GAGACGCATGTAACTA-GACACGGC...............................................................................................................................................................................................2490.5650000000050
.............................................................AGACGCATGTAACTA-GACACGGC...............................................................................................................................................................................................2390.5650000000050
...........................................................................A-GACACGGCTGATTGTGC--TGC.................................................................................................................................................................................21110.5560200112000
.........................................................................CTA-GACACGGCTGATTGTG.......................................................................................................................................................................................19110.5560000020040
......................................................................................................................................................................................................................ACGCACCCAATCGCCTGTAGGAT.......................................2340.5020200000000
...........................................................................................................................................................................................................................CCCAATCGCCTGTAGGATTCTCGCCA...............................2660.5030300000000
.......................................................................................................................................................................................................................CGCACCCAATCGCCTGTAGGATTCT....................................2540.5020200000000
...........................................................................................................................................................................................................................CCCAATCGCCTGTAGGATTCTCGCC................................2560.5030300000000
.....................................................................GTAACTA-GACACGGCTGATTG.........................................................................................................................................................................................21100.5050110011010
..........................................................................................................................................................................................................................ACCCAATCGCCTGTAGGATTCTCGC.................................2560.5030100000020
.......................................................AAAAGGAGACGCATGTAACTA-GA.....................................................................................................................................................................................................23120.5060000006000
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCC................................2060.5030300000000
......................................................................................................................................................................................................................................GTAGGATTCTCGCCAT---------CGCC---C.............2160.5030300000000
.....................................................................................................................................................................................................................GACGCACCCAATCGCCTGTAGG.........................................22100.5050000000050
.................................................................................................................................................................................................................................CGCCTGTAGGATTCTCGCCAT---------CGCC---C.............2660.5030300000000
....................................................................................................................................................................................................................................CTGTAGGATTCTCGCCAT---------CGCC---CA............2460.5030300000000
............................................................................................................................................................................................................................................TTCTCGCCAT---------CGCC---CACGTTAAG.....2360.5030000000300
.......................................................................................................................................................................................................................CGCACCCAATCGCCTGTAGGATTC.....................................2440.5020200000000
............................................................................................................................................................................................................................................TTCTCGCCAT---------CGCC---CACGTTAAGCAAG.2760.5030300000000
.............................................................................................................................................................................................................................................TCTCGCCAT---------CGCC---CACGTTAA......2160.5030100000200
AGGGCGACCA----------------C---CAGCACACCC............................................................................................................................................................................................................................................2120.5010000001000
.................................................................................................................................................................................................................................CGCCTGTAGGATTCTCGCCAT---------CGCC---..............2560.5030300000000
..................................................................................................................................................................................................................................GCCTGTAGGATTCTCGCCAT---------CGCC---C.............2560.5030300000000
..........................................................................................................................................................................................................................ACCCAATCGCCTGTAGGATTCTCGCC................................2660.5030300000000
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACGTTAAA.....2860.5030300000000
........................................................................................................................................................................................................................GCACCCAATCGCCTGTAGGATTC.....................................2360.5030300000000
...................................................................................GCTGATTGTGC--TGCACAGG-------------...............................................................................................................................................................19170.4780100001060
..........................................................................TA-GACACGGCTGATTGTGC--T...................................................................................................................................................................................20110.4551000004000
...........................................................................A-GACACGGCTGATTGTGC--TG..................................................................................................................................................................................20110.4552100010010
................................................GCATCGCAAAAGGAGACGC.................................................................................................................................................................................................................19200.4590000001080
.................................................................GCATGTAACTA-GACACGGCT..............................................................................................................................................................................................2090.4440000000040
..................................................ATCGCAAAAGGAGACGCAT...............................................................................................................................................................................................................19190.4280100000061
........................................................AAAGGAGACGCATGTAACTA-.......................................................................................................................................................................................................20120.4250000014000
...................................................................................GCTGATTGTGC--TGCACAGG-------------C..............................................................................................................................................................20170.4170100000060
...................................................................................................................................................TTTCAAA-CGGATG---CGT---TTATA---------------------------------....................................................................21160.3860000000060
..............................................................................................................................................................ATG---CGT---TTATA---------------------------------TTTCAGACG...........................................................20110.3641000000030
.......................................................................AACTA-GACACGGCTGATTG.........................................................................................................................................................................................19110.3640000003010
.............................................CGCGCATCGCAAAAGGAGACGC.................................................................................................................................................................................................................22200.3570100000240
................................................................CGCATGTAACTA-GACACGGCT..............................................................................................................................................................................................2190.3330000100020
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGC..................2060.3320200000000
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGCC---CACGTTA.......2860.3320000000200
....................................................................................................................................................................................................................................CTGTAGGATTCTCGCCAT---------CGCC---C.............2360.3320200000000
...............................................................................................................................................................................................................................................TCGCCAT---------CGCC---CACGTTAAGCAAGC2560.3320200000000
.................................................................................CGGCTGATTGTGC--TGCACAG.............................................................................................................................................................................20180.3360200000040
........................................................................................................................................................................................................................................AGGATTCTCGCCAT---------CGCC---CACGTTAA......2660.3320200000000
.................................................................................................................................................................................................................................CGCCTGTAGGATTCTCGCCAT---------CG...................2360.3320200000000
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---CACGTA........2560.3320110000000
........................................................................................................................................................................................................................................AGGATTCTCGCCAT---------CGCC---C.............1960.3320200000000
.............................................................................................................................................................................................................................CAATCGCCTGTAGGATTCTCGCCAT---------.....................2560.3320100000100
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGC..................1860.3320000000200
...................................................................................................................................................................................................................................CCTGTAGGATTCTCGCCAT---------CGCC---CA............2560.3320110000000
............................................................................................................................................................................................................................CCAATCGCCTGTAGGATTCTCGC.................................2360.3320100000100
....................................................................................................................................................................................................................................CTGTAGGATTCTCGCCAT---------CGC..................2160.3320200000000
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGCC---CACGTT........2760.3320110000000
...........................................................................................................................................................................................................................................ATTCTCGCCAT---------CGCC---CACGT.........2060.3320200000000
....................................................................TGTAACTA-GACACGGCTGAT...........................................................................................................................................................................................2090.3330000000030
............................................................................................................................................................................................................................................TTCTCGCCAT---------CGCC---CACGTTAAGCAA..2660.3320200000000
.............................................................................................................................................................................................................................................TCTCGCCAT---------CGCC---CACGTTAAGCAA..2560.3320200000000
..........................................................................................................................................................................................................................................GATTCTCGCCAT---------CGCC---CACGTTA.......2360.3320200000000
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CG...................1960.3320200000000
.........................................................................................................................................................................................................................CACCCAATCGCCTGTAGGATTCTCGCGT...............................2860.3320000000200
...............................................................................................................................................................................................................................ATCGCCTGTAGGATTCTCGCCA...............................2260.3320200000000
...........................................................GGAGACGCATGTAACTA-GACACGGC...............................................................................................................................................................................................2590.3330000000030
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCCAT---------CGT..................2560.3320000000200
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CGCC---T.............2060.3320200000000
..................................................................................................................................................................................................................................GCCTGTAGGATTCTCGCCAT---------CGCC---CA............2660.3320110000000
..........................................................................................................................................................................................................................ACCCAATCGCCTGTAGGATTCTCGCCA...............................2760.3320000000200
............................................................................................................................................................................................................................................TTCTCGCCAT---------CGCC---CACGTTAAGCAAGC2860.3320200000000
..............................................................................................................................................................................................................................................CTCGCCAT---------CGCC---CACGTTAAGC....2260.3320200000000
....................................................................................................................................................................................................................................CTGTAGGATTCTCGCCAT---------CGCC---A.............2360.3320200000000
.............................................................................................................................................................................................................................................TCTCGCCAT---------CGCC---CACGTTAAGC....2360.3320200000000
....................................................................................................................................................TTCAAA-CGGATG---CGT---TTATA---------------------------------T...................................................................21160.3150000002030
.........................................................................................................................................................A-CGGATG---CGT---TTATA---------------------------------TTTCAG..............................................................21160.3150000001040
....................................................................................................................................................TTCAAA-CGGATG---CGT---TTATA---------------------------------TTTCAGACG...........................................................29100.3030000003000
.................................................................................................................................................................................................................TTCAGACGCACCCAATCGCC...............................................20100.3030000003000
..................................................................................................................................................................................................................TCAGACGCACCCAATCGCCTG.............................................21100.3030300000000
.....................................................................................TGATTGTGC--TGCACAGG-------------CCA............................................................................................................................................................20170.2950300010010
..............................................................................................................................................................ATG---CGT---TTATA---------------------------------TTTCAGAC............................................................19110.2732000001000
........................................................................ACTA-GACACGGCTGATTGTG.......................................................................................................................................................................................20110.2730000011010
................................................GCATCGCAAAAGGAGACGCAT...............................................................................................................................................................................................................21190.2650000000050
.............................................................................................C--TGCACAGG-------------CCACAGCTCCAC...................................................................................................................................................21160.2540102001000
......................................................................................................................................................................................................................ACGCACCCAATCGCCTGTAGGATTCT....................................2640.2510100000000
...................................................TCGCAAAAGGAGACGCATG..............................................................................................................................................................................................................19160.2540200000020
.......................................................................................................................................................................................................................CGCACCCAATCGCCTGTAGGATTCTCG..................................2740.2510010000000
.............................................CGCGCATCGCAAAAGGAGA....................................................................................................................................................................................................................19200.2550000004010
.........................................................................................................................................................................................................................CACCCAATCGCCTGTAGGA........................................19200.2551000001030
.......................................................................................................................................................................................................................CGCACCCAATCGCCTGTAGGATTT.....................................2440.2510100000000
...............................................CGCATCGCAAAAGGAGACGCATG..............................................................................................................................................................................................................23160.2540000001030
....................................................................TGTAACTA-GACACGGCTGATTGTG.......................................................................................................................................................................................2490.2220100000010
..................................................................CATGTAACTA-GACACGGCTGATTGTGC--....................................................................................................................................................................................2790.2220000000020
...................................................................ATGTAACTA-GACACGGCTGA............................................................................................................................................................................................2090.2220100000010
............................................................GAGACGCATGTAACTA-GACACGGCT..............................................................................................................................................................................................2590.2220000000020
........................................................AAAGGAGACGCATGTAACTA-GACACGGC...............................................................................................................................................................................................2890.2220000001010
..........................................................AGGAGACGCATGTAACTA-GACACGGC...............................................................................................................................................................................................2690.2220000000020
.......................................................AAAAGGAGACGCATGTAACT.........................................................................................................................................................................................................20140.2130000003000
......................................................CAAAAGGAGACGCATGTAACT.........................................................................................................................................................................................................21140.2130000003000
................................................................................................................................................................................................................TTTCAGACGCACCCAATCGCCTGTAGGA........................................28100.2020000000020
.................................................CATCGCAAAAGGAGACGCAA...............................................................................................................................................................................................................20200.2040000000040
.................................................CATCGCAAAAGGAGACGCA................................................................................................................................................................................................................19200.2040000000040
.....................................................................................................................................................................................................................GACGCACCCAATCGCCTGTAGT.........................................22100.2020000000020
.....................................................................GTAACTA-GACACGGCTGATT..........................................................................................................................................................................................20100.2020100000010
.............................................................................................................................................................................TA---------------------------------TTTCAGACGCACCCAATCG.................................................21100.2020000002000
................................................................................................................................................................................................................TTTCAGACGCACCCAATCGC................................................20100.2020010001000
....................................................................................................................................................................................................................AGACGCACCCAATCGCCTGTA...........................................21100.2020100000010
.................................................CATCGCAAAAGGAGACGCATGTA............................................................................................................................................................................................................23150.2030000000030
......................................................................................................................................................................T---TTATA---------------------------------TTTCAGACGCACCCA.....................................................21100.2020001000010
........................................................................................................................................................................................................................GCACCCAATCGCCTGTAGG.........................................19200.2040000000040
.................................................CATCGCAAAAGGAGACGCATGA.............................................................................................................................................................................................................22160.1930000000030
.........................................................................CTA-GACACGGCTGATTGTGC--....................................................................................................................................................................................20110.1820000001010
........................................................................ACTA-GACACGGCTGATTGTGC--....................................................................................................................................................................................21110.1820000011000
.......................................................................AACTA-GACACGGCTGATTGTGC--T...................................................................................................................................................................................23110.1820000000020
...................................................................................GCTGATTGTGC--TGCACAGG-------------CC.............................................................................................................................................................21170.1830011000010
..................................................................................GGCTGATTGTGC--TGCACAGG-------------C..............................................................................................................................................................21170.1830000200010
...............................................................................................................................................................................................................................................TCGCCAT---------CGCC---CACGTTAAGCAAG.2460.1710100000000
......................................................................................................................................................................................................................................GTAGGATTCTCGCCAT---------CGCC---..............2060.1710100000000
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCCAT---------CGCA---..............2660.1710000000010
...............................................................................................................................................................................................................................ATCGCCTGTAGGATTCTCG..................................1960.1710000000100
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCCAT---------CGCC---CAC...........2960.1710100000000
................................................................................................................................................................................................................................TCGCCTGTAGGATTCTCGCCAT---------.....................2260.1710100000000
..........................................................................................................................................................................................................................................GATTCTCGCCAT---------CGCC---CACGTTAAG.....2560.1710100000000
.................................................................................................................................................................................................................................CGCCTGTAGGATTCTCGC.................................1860.1710100000000
................................................................................................................................................................................................................................................CGCCAT---------CGCC---CACGTTAAGCAAG.2360.1710100000000
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGCC---CAAA..........2560.1710100000000
......................................................................................................................................................................................................................................GTAGGATTCTCGCCAT---------CGCC---CACGTTAA......2860.1710100000000
........................................................................................................................................................................................................................................AGGATTCTCGCCAT---------CGCC---CACGTTAAG.....2760.1710100000000
.......................................................................................................................................................................................................................................TAGGATTCTCGCCAT---------CG...................1760.1710000000100
...........................................................................................................................................................................................................................CCCAATCGCCTGTAGGATTCTCGCCAT---------.....................2760.1710000000010
...............................................................................................................................................................................................................................ATCGCCTGTAGGATTCTCGCC................................2160.1710100000000
.................................................................................................................................................................................................................................CGCCTGTAGGATTCTCGCCAT---------CGC..................2460.1710100000000
.........................................................................................................................................................................................................................CACCCAATCGCCTGTAGGATTCT....................................2360.1710100000000
.....................................................................................................................................................................................................................................TGTAGGATTCTCGCCAT---------CGCC---CACGC.........2660.1710010000000
.............................................................................................................................................................................................................................................TCTCGCCAT---------CGCC---CACGT.........1860.1710100000000
................................................................................................................................................................................................................................................CGCCAT---------CGCC---CACGTTAAGCAAGC2460.1710100000000
droPer2
GGGGCGACCA----------------C---CAGCACACCCAGCCGCGCGCATCGCAAAAGGAGACGCATGTAACTA-GACACGGCTGATTGTGC--TGCACAGG-------------CCACAGCTCCACA------GA-CGCGCACATTTCAAA-CGGATG---CGT---TTATA---------------------------------TTTCAGACGCACCCAATCGCCTGTAGGATTCTCGCCAT---------CGCC---CACGTTAAGCAAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................CACAGCTCCACA------GA-CGCGCAC..................................................................................................................................2111.001000010
droWil2
GATGTAGAGA----------------C---AGAGACAGAAGG---CCCTACGCGTAAAAGGAAGCACATGTAAGGT-TAACTAA----TT---GAC------TTACTCAA-----CT-------------------GG-AAATTATATTTTGTT------TGGATTT--TTTTCT---------------------------------CTTCAGACGTACCCAACACTCG----ACAC-----CTT---------CGCCTCCTGGTTTATGTAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................CAGAAGG---CCCTACGCGTAAAA.........................................................................................................................................................................................................................2111.00100010
droVir3
ACAGCGCCAGTATGCAAAATGCGAG--------CTCAAA------CAAGCAGCGCAAGAGACGACGCATGTAAGTTATATACCA----TTGC-CCC------GGGC--------------ACGTTTTTC-----C-AACAATTTATTTAATGAT------TGTTTCG---CCAGG---------------------------------GATGAGGAACACGCGAACTCGGTT-------TCACCATCGCCAACGAAACA---TGCTGCCCGCAAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................G--------CTCAAA------CAAGCAGCGCAAGA.........................................................................................................................................................................................................................2111.001000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................TGAGGAACACGCGAACTCGGTT-------TCACC................................2711.001010000000000000000000000000000000000000000000000000000000000000
...............................................AGCAGCGCAAGAGACGACG..................................................................................................................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
AATACGAATC----------------C---CAATACACAACA---C---ACACGTAAGAGACGCCGCGTGTAAGTA-GT---TT----TA---AAT------TTACATTT---TTTC-------------------AG-AAGGTAC--TC----------ACTGCTT---TTAATACTAGACGCGTAAATTCATTGCCATTGGATGGAGAGCAGGCGAACCCAGTCCCACG--A-----------TCACCCTCAGAGCG---TTTTAACTGTAAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ACACTGCCTG-CCAG-----C-GAAAT-GCTAATTCAAA------TACGCAGCGCAAGAGGCGACGCACGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AGAGCAGCACAACGG-----GAGAGGCCAGCAATTCGCA------TTCTCATAGGAAGCGAATGCGACGGTAATTC-GG--------------------ACGGA-------------TTGCTATTTCTTAGGTTTCAC-ATATTATATTGTGAT------GTGTTCT---CCGTT---------------------------------TCTCAGACGCACACAATCGCCGGTGGACACCCTATCCT---------CGCC---TTCCAATAGCAAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AGAGCAGCACTACAG-----GAGAGCCCAGCAATTCGCA------TTCTCATAGGAAACGAATGCACCGGTAAT-A-TGGATTT----CT---ATT------TCTTA----TGTTTC-------------------GC-AAATTATATTCTGAT------GTTTTAT---CTGTT---------------------------------TTTCAGACACACTCAATCCCCGTTGGACACCTTATCCT---------CGCC---TTCCCTTAGCAAGCSizeHit CountTotal NormTotal
No Reads
droKik1
GAGGTGGCC-----------------------CATCCCA------GGCGCACCGAAAGCGGAGGCGCTTGTAATTA-TGGATTT----TG---CC-------TGTCAGTATGACAGC-------------------AC-GAAGCTAATTTTCCC------TTTTTAA---A-TCT---------------------------------TAACAGATCCACTCAATCCCCGGGGGACTACTTGTCGT---------CGCC---TTCCTTCAGCAAGCSizeHit CountTotal NormTotal
No Reads
droFic1
AAAACAGCACTCCGA-----AAGAACCCAGGACCTCGCA------GTCGCATCGCAAGAGGAGGCGCTTGTAATTA-TGGAATT----CT---CAC------AT----AA-----CC-GAAAACCT---------------CTCTCAC-G----------TTTACCTTTTCCATT---------------------------------CCGCAGACGCACCCAATCCCCAGTGAACAGCCTCTCCT---------CACC---CTCGTTTAGCAAGCSizeHit CountTotal NormTotal
No Reads
droEle1
AGGGTCCC--------------GAGTCCAGCATATCGCA------GTCGCATCGCAAGAGGAGGCGCTTGTAATTA-TATCT----------------------------ACACATTGGGAAGTTCCTA-------AG-AACTCTCAT-GTTTACTGATCA---TGA---TTATT--------------------ATCCCT-------CCACAGACGCACTCAATCCCCCGGAAATAACCTGTCCT---------CGCC---TTCGTTCAGCAAGCSizeHit CountTotal NormTotal
No Reads
droRho1
AGGGC-----------------GAACCAAGCATATCGCT------GTCGCAACGCAAGA---GGCGCTTGTAATTA-TGCATTG----TT---ATC------AT-----------TC-GGAAACTCCTC-------AA-AA--CTCACTG----------TTCACCC---CCCT----------------------------------TTCTAGACGCACTCATTCCCCCGTAAACAGCCTG---A---------CGCC---TTCGTTCAGCAAGCSizeHit CountTotal NormTotal
No Reads
droBia1
CAGGC-----------------GAGCCCAGCATATCGCA------GTCGCATCGCAAGAGGAGGCGCTTGTAAATA-TGGATTT----TT---CCC------C-----------ATCCGACAGT---------------GCCTTACATTGTCCA------CTTACCA---CTTTT-----------------------C---------CTCTAGACGCACCCAGTCGCCCGTGAACAGCATGTCCT---------CGCC---CTCGTTCAGCAAGCSizeHit CountTotal NormTotal
No Reads
droTak1
GGC-------------------GAGCCCACCATCGCACC------GTCGCATCGCAAGAGGAGGCGCCTGTAAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AGAGCAACACCCCAG-----GCGAGCCCAGCATATCACA------GTCTGATCGCAAAAGAAGGCGCTTGTAAT----ATATTT----TT---GGC------TTCCGTAAACCGCTC-------------------AG-AGTTCACATTGTTTG------TTTACCC---CTTTT---------------------------------TCCTAGGCGTACGCAATCTCCTGTGAATAGCATGTCCT---------CGCC---TTCATTCAGCAAAASizeHit CountTotal NormTotal
No Reads
dm3
AAAGCAGCACCCCAG-----GCGAGCCCACCATATCACA------GTCGCATCGCAAGAGAAGGCGCTTGTAATTA-TAGATTT----TT---CCT------TGACACAAGCACATC-------------------GG-AATTCTCATTGCTCT------CTTACCC---CTTTT---------------------------------CCCCAGGCGCACCCATTCTCCCGTGAACAGCATTTCTT---------CGCC---TTCGTTTAGCAAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................A------GTCGCATCGCAAGAGAA......................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCACA------GTCGCATCGCAAGAGAAGGCGC.................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAAGCAGCACCCCAG-----GCGAGCCCACC.....................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000
..................................TCACA------GTCGCATCGCAAGAGAAGGC...................................................................................................................................................................................................................2512.0020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................ATTTCTT---------CGCC---TTCGTTTAGC....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................A------GTCGCATCGCAAGAGAAGGC...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CGCATCGCAAGAGAAGGCGCT................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................GTCGCATCGCAAGAGAAGGCGCTTGCG............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GCACCCATTCTCCCGTGAACA.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ACA------GTCGCATCGCAAGAGAAGGCGCT................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................CACCCATTCTCCCGTGAACAGCATT..................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................TCACA------GTCGCATCGCAAGAGAAGGCGCT................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................CCCGTGAACAGCATTTCT...............................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TATCACA------GTCGCATCGCAAGAGAAGGC...................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................ATCACA------GTCGCATCGCAAGAGAAGGCGC.................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................TCACA------GTCGCATCGCAAGAGAAGGCG..................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GCATCGCAAGAGAAGGCGCTTGCG............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CACCATATCACA------GTCGCATCGCAAGA.........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TCGCAAGAGAAGGCGCTT...............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATATCACA------GTCGCATCGCAAGA.........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................TT---------CGCC---TTCGTTTAGCAAG.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................TCCCGTGAACAGCATTTCTT---------CGCC---..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TCGCATCGCAAGAGAAGGC...................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CACA------GTCGCATCGCAAGAGAAGGC...................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................TCACA------GTCGCATCGCAAGAGAAAA....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
droSim2
AAAGCAGCACCCCAG-----GCGAGCCCACCATATCGCA------GTCGCATCGCAAGAGAAGGCGCTTGTAATTA-TAGATTT----TT---CCT------TGACACAACCACATC-------------------GG-AATTCTCATTGCTCT------CTTACCC---CTGTT---------------------------------CCCCAGACGCACCCATTCTCCCGTGAACAGCATTTCTT---------CGCC---TTCGTTTAGCAAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................TATCGCA------GTCGCATCGCAAGAGAA......................................................................................................................................................................................................................2411.00100000000001000000
..................................................ATCGCAAGAGAAGGT...................................................................................................................................................................................................................1560.17100000001000000000
droSec2
AAAGCAGCACCCCAG-----GCGAGCCCACCATATCGCA------GTCGCATCGCAAGAGAAGGCGCTTGTAATTA-TAGATTT----TT---CCT------TGACACAAACAAATC-------------------GG-AATTCTCATTGCTCT------CTTACCC---CTGTT---------------------------------CCCCAGACGCACCCATTCTCCCGTGAACAGCATTTCTT---------CGCC---TTCGTTTAGCAAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CAGGC-----------------GAGACCATCATATCGCA------GTCGCATCGCAAGAGAAGGCGCTTGTAATTA-TAGATTT----TT---CCC------TGACACAAATACATC-------------------TG-AATTCTCATTGCTTT------CTTACCC---TTGTT---------------------------------CCCCAGACGCACCCATTCCCCCGTGAACAGCATTTCCT---------CGCC---TTCGTTCAGCAAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CAGGC-----------------GAAACCACCATATCGCA------GTCGCACCGCAAGAGAAGGCGATTGTAATTA-TAGATTT----TT---CCC------TGACACAAACACATC-------------------GG-AATTCTCATTGCTTT------CTTACCC---CCGTT---------------------------------CCCCAGACGCACCCATTCCCCCGTGAACAGCATTTCCT---------CGCC---TTCGTTCAGCAAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................GCATTTCCT---------CGCC---TTCGTTCA......2111.0011000000

Generated: 05/18/2015 at 05:03 AM