ID:

dps_2616

 Coordinate:

XL_group1e:1163342-1163437 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.4 -7.0 -6.8

Flybase annnotation

exon [dpse_GLEANR_750:1]; CDS [Dpse\GA11418-cds]; exon [dpse_GLEANR_750:2]; CDS [Dpse\GA11418-cds]; intron [Dpse\GA11418-in]

No Repeatable elements found

mature
  1. dps_2616  XL_group1e:1163344-1163363 +
  2. dps_2055  Unknown_group_524:4221-4240 -
  3. dps_2060  Unknown_group_524:8893-8912 -
  4. 2:10383170-10383189 -
  5. Unknown_group_621:4130-4149 +
  6. Unknown_group_621:6250-6269 +
  7. Unknown_group_621:8326-8345 +
  8. dps_2122  Unknown_group_621:10619-10638 +
  9. dps_2137  Unknown_group_621:20280-20299 +
  10. Unknown_group_621:29080-29099 -
  11. dps_2153  Unknown_group_621:34298-34317 -
star
  1. dps_2616  XL_group1e:1163383-1163406 +
  2. dps_2055  Unknown_group_524:4185-4208 -
  3. dps_2060  Unknown_group_524:8857-8880 -
  4. Unknown_group_621:8358-8381 +
  5. dps_2137  Unknown_group_621:20312-20335 +
  6. Unknown_group_621:23838-23861 -
  7. Unknown_group_621:29044-29067 -
  8. dps_2153  Unknown_group_621:34262-34285 -

Sense Strand Reads

----##############################################------------------------------------------------------------------------------------------------##################################################
AGACATGGAATCAATTGTTTTGCACTCGGATGTGGCTCGTCTGGTATTGGGTAATTACTGTTTACTGTTTACTGTTTACATCCGTAAACACTTGTAATTCTGTTGTGGCATTTTCTTTTGTGGCTTGGCTCCCCGCTCCCTTGCAGGTTACCTGGTGAATCAGGATCTGAAAAAAGCCGCTCACACACTGTGCCGC
****************************************************......((((.((...(((((((((((....)))))))...))))....))...)))).....********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 V112
male body		 SRR902011
testis
 GSM343916
embryo
 M022
male body		 M062
head
 GSM444067
head
 SRR902012
CNS imaginal disc
.....TGGAATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 25 0 10 34.20 342 227 98 9 1 7 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACA........... 26 0 14 26.21 367 357 2 5 2 0 0 0 1 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGC... 26 0 12 22.00 264 180 74 6 0 2 1 0 1 0 0
....................TGCACTCGGATGTGGCTCGTCTGG........................................................................................................................................................ 24 0 10 16.90 169 164 0 1 3 0 1 0 0 0 0
.....TGGAATCAATTGTTTTGCACTCGGATG.................................................................................................................................................................... 27 0 9 15.44 139 125 11 1 1 1 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTG...... 25 0 14 11.00 154 145 4 3 1 0 1 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCAC............ 25 0 14 10.14 142 125 0 17 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTG......................................................................................................................................................... 23 0 10 9.90 99 98 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACA......... 28 0 14 8.71 122 118 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACAC........ 29 0 14 6.79 95 89 0 5 1 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACAC.......... 27 0 14 6.50 91 83 0 6 2 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCA............. 24 0 14 6.43 90 86 0 2 1 0 1 0 0 0 0
.....TGGAATCAATTGTTTTGCACTCGG....................................................................................................................................................................... 24 0 10 5.10 51 37 9 0 0 5 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCT.......................................................................................................................................................... 22 0 10 5.00 50 50 0 0 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGC................................................................................................................................................................ 22 0 11 4.91 54 39 3 1 7 0 4 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTC.............................................................................................................................................................. 24 0 11 4.73 52 46 2 2 1 0 0 1 0 0 0
....................TGCACTCGGATGTGGCTCGTC........................................................................................................................................................... 21 0 10 4.10 41 41 0 0 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGG................................................................................................................................................................. 21 0 11 4.09 45 41 0 0 3 1 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGTGC... 28 0 12 4.00 48 41 2 5 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTC.............. 23 0 14 3.64 51 46 0 3 0 1 0 0 0 1 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTG.... 25 0 12 3.25 39 31 5 1 0 2 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTGGT....................................................................................................................................................... 25 0 10 2.90 29 29 0 0 0 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACA........... 25 0 14 2.50 35 34 1 0 0 0 0 0 0 0 0
..........TCAATTGTTTTGCACTCGGATGTGG................................................................................................................................................................. 25 0 10 2.20 22 19 1 0 0 0 0 0 0 0 2
......GGAATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 24 0 10 2.00 20 20 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GAAAAAAGCCGCTCACACACTGTGC... 25 0 12 2.00 24 23 0 1 0 0 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGGCTC.............................................................................................................................................................. 23 0 11 1.91 21 20 1 0 0 0 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGGC................................................................................................................................................................ 21 0 11 1.82 20 12 3 0 2 0 2 0 0 1 0
...............TGTTTTGCACTCGGATGTGGCTCGTC........................................................................................................................................................... 26 0 10 1.80 18 18 0 0 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTGCACTCGGAT..................................................................................................................................................................... 26 0 10 1.70 17 13 3 1 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCT............................................................................................................................................................... 23 0 11 1.55 17 16 0 1 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTCG............................................................................................................................................................. 25 0 11 1.55 17 16 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACAC........ 23 0 14 1.50 21 16 5 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTG...... 23 0 14 1.50 21 20 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGT..... 26 0 14 1.43 20 16 3 1 0 0 0 0 0 0 0
....ATGGAATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 26 0 10 1.40 14 11 2 0 0 1 0 0 0 0 0
..........TCAATTGTTTTGCACTCGGATGTGGC................................................................................................................................................................ 26 0 10 1.40 14 8 1 2 2 0 1 0 0 0 0
.....TGGAATCAATTGTTTTGCACTCG........................................................................................................................................................................ 23 0 10 1.30 13 12 0 1 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTCGT............................................................................................................................................................ 26 0 10 1.30 13 13 0 0 0 0 0 0 0 0 0
.....................GCACTCGGATGTGGCTCGTCTGG........................................................................................................................................................ 23 0 10 1.30 13 13 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................CTGAAAAAAGCCGCTCACACACTG...... 24 0 14 1.29 18 17 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGTG.... 27 0 12 1.17 14 11 2 1 0 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACAC.......... 26 0 14 1.14 16 16 0 0 0 0 0 0 0 0 0
.....................GCACTCGGATGTGGCTCGTCTG......................................................................................................................................................... 22 0 10 1.10 11 11 0 0 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTG.................................................................................................................................................................. 20 0 11 1.09 12 10 1 0 1 0 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGGCTCG............................................................................................................................................................. 24 0 11 1.09 12 12 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCGC................ 25 0 13 1.00 13 8 4 1 0 0 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGGCT............................................................................................................................................................... 22 0 11 0.91 10 9 0 0 0 0 1 0 0 0 0
....................TGCACTCGGATGTGGCTCG............................................................................................................................................................. 19 0 11 0.91 10 10 0 0 0 0 0 0 0 0 0
...................TTGCACTCGGATGTGGCTCGTCTGG........................................................................................................................................................ 25 0 10 0.90 9 8 0 0 1 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTCGTC........................................................................................................................................................... 27 0 10 0.90 9 9 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACT....... 24 0 14 0.86 12 8 3 1 0 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACACA......... 27 0 14 0.86 12 12 0 0 0 0 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGG................................................................................................................................................................. 20 0 11 0.82 9 6 0 1 1 1 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCAC............ 24 0 14 0.71 10 9 0 0 1 0 0 0 0 0 0
..........TCAATTGTTTTGCACTCGGATGTGGCT............................................................................................................................................................... 27 0 10 0.70 7 6 1 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGT............................................................................................................................................................ 20 0 10 0.70 7 7 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTGGG....................................................................................................................................................... 25 1 10 0.70 7 7 0 0 0 0 0 0 0 0 0
......GGAATCAATTGTTTTGCACTCGGATG.................................................................................................................................................................... 26 0 9 0.67 6 6 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGT..... 24 0 14 0.64 9 7 2 0 0 0 0 0 0 0 0
.....TTGAATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 25 1 10 0.60 6 0 0 6 0 0 0 0 0 0 0
.....................GCACTCGGATGTGGCTCGTCT.......................................................................................................................................................... 21 0 10 0.60 6 6 0 0 0 0 0 0 0 0 0
......GGAATCAATTGTTTTGCACTCGG....................................................................................................................................................................... 23 0 10 0.60 6 6 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGCC.. 27 0 12 0.58 7 5 0 2 0 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACACAC........ 28 0 14 0.57 8 7 0 1 0 0 0 0 0 0 0
...................TTGCACTCGGATGTGGCTCGTC........................................................................................................................................................... 22 0 10 0.50 5 5 0 0 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTG.............................................................................................................................................................................. 17 0 12 0.50 6 0 5 0 0 1 0 0 0 0 0
..................TTTGCACTCGGATGTGGCTCGTCTGG........................................................................................................................................................ 26 0 10 0.50 5 5 0 0 0 0 0 0 0 0 0
...................TTGCACTCGGATGTGGCTCGTCT.......................................................................................................................................................... 23 0 10 0.50 5 5 0 0 0 0 0 0 0 0 0
........................................................................................................................................................TGGTGAATCAGGATCTGAAAAAAGC................... 25 0 13 0.46 6 2 2 0 0 1 1 0 0 0 0
....ATGGAATCAATTGTTTTGCACTCGGATG.................................................................................................................................................................... 28 0 9 0.44 4 3 0 0 1 0 0 0 0 0 0
.....TGGAATCAATTGTTTTGCACTCGGAA..................................................................................................................................................................... 26 1 10 0.40 4 2 0 2 0 0 0 0 0 0 0
...................TTGCACTCGGATGTGGCTCGTCTG......................................................................................................................................................... 24 0 10 0.40 4 3 0 0 1 0 0 0 0 0 0
...........CAATTGTTTTGCACTCGGATGTGG................................................................................................................................................................. 24 0 10 0.40 4 4 0 0 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTGCACTC......................................................................................................................................................................... 22 0 10 0.40 4 2 0 2 0 0 0 0 0 0 0
..........TCAATTGTTTTGCACTCGGATGTGGCTC.............................................................................................................................................................. 28 0 10 0.40 4 4 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCCTCTGG........................................................................................................................................................ 24 1 10 0.40 4 4 0 0 0 0 0 0 0 0 0
.................TTTTGCACTCGGATGTGGCTCGTC........................................................................................................................................................... 24 0 10 0.40 4 4 0 0 0 0 0 0 0 0 0
..............................................TTGGGTAATTACTGTTTACTGTT............................................................................................................................... 23 0 10 0.40 4 0 4 0 0 0 0 0 0 0 0
...........................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCGCTC.............. 27 0 13 0.38 5 4 1 0 0 0 0 0 0 0 0
..................TTTGCACTCGGATGTGGCTC.............................................................................................................................................................. 20 0 11 0.36 4 3 0 0 0 0 0 1 0 0 0
.................TTTTGCACTCGGATGTGGCTCG............................................................................................................................................................. 22 0 11 0.36 4 2 0 0 2 0 0 0 0 0 0
................GTTTTGCACTCGGATGTGGC................................................................................................................................................................ 20 0 11 0.36 4 2 0 0 2 0 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTC.............. 22 0 14 0.36 5 5 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACAA.......... 27 1 14 0.36 5 5 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCT............... 22 0 14 0.36 5 4 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................CTGAAAAAAGCCGCTCACACACTGTGC... 27 0 12 0.33 4 4 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTC.............. 24 0 13 0.31 4 2 0 2 0 0 0 0 0 0 0
..............................TGTGGCTCGTCTGGTATTGG.................................................................................................................................................. 20 0 13 0.31 4 3 0 0 1 0 0 0 0 0 0
..................TTTGCACTCGGATGTGGCTCGTC........................................................................................................................................................... 23 0 10 0.30 3 3 0 0 0 0 0 0 0 0 0
.........................................TGGTATTGGGTAATTACTGTTTA.................................................................................................................................... 23 0 10 0.30 3 1 0 0 0 2 0 0 0 0 0
..ACATGGAATCAATTGTTTTGCACTCGG....................................................................................................................................................................... 27 0 10 0.30 3 1 0 0 0 2 0 0 0 0 0
.......GAATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 23 0 10 0.30 3 3 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCAAA........................................................................................................................................................ 24 3 10 0.30 3 3 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTA......................................................................................................................................................... 23 1 10 0.30 3 3 0 0 0 0 0 0 0 0 0
....CTGGAATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 26 1 10 0.30 3 2 0 0 0 1 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGGCTCGT............................................................................................................................................................ 25 0 10 0.30 3 2 0 0 1 0 0 0 0 0 0
..........TCAATTGTTTTGCACTCGGATG.................................................................................................................................................................... 22 0 10 0.30 3 3 0 0 0 0 0 0 0 0 0
...................TTGCACTCGGATGTGGCTC.............................................................................................................................................................. 19 0 11 0.27 3 2 0 0 0 0 0 1 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTCA............................................................................................................................................................. 25 1 11 0.27 3 0 3 0 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGT................................................................................................................................................................ 22 1 11 0.27 3 3 0 0 0 0 0 0 0 0 0
..................TTTGCACTCGGATGTGGCTCG............................................................................................................................................................. 21 0 11 0.27 3 1 0 2 0 0 0 0 0 0 0
....................................................AATTACTGTTTACTGTTTAC............................................................................................................................ 20 0 11 0.27 3 0 0 0 0 3 0 0 0 0 0
....................TGCACTCGGATGTGGCTCCCC........................................................................................................................................................... 21 2 11 0.27 3 0 1 0 0 0 2 0 0 0 0
..............................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTCAC............ 26 0 13 0.23 3 3 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTCA............. 25 0 13 0.23 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TGCAGGTTACCTGGTGAATCAGGA............................... 24 0 9 0.22 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGC................ 21 0 14 0.21 3 2 0 0 0 1 0 0 0 0 0
................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCA............. 23 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACACA......... 26 0 14 0.21 3 1 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCG................. 20 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACACAC........ 27 0 14 0.21 3 3 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCAA......................................................................................................................................................... 23 2 10 0.20 2 2 0 0 0 0 0 0 0 0 0
...CATGGAATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 27 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
............................................TATTGGGTAATTACTGTTTACTG................................................................................................................................. 23 0 10 0.20 2 0 0 0 0 2 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTGGTA...................................................................................................................................................... 26 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.....................GCACTCGGATGTGGCTCGTC........................................................................................................................................................... 20 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.....TGGTATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 25 1 10 0.20 2 1 0 1 0 0 0 0 0 0 0
.........ATCAATTGTTTTGCACTCGGATGTGGC................................................................................................................................................................ 27 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCA.......................................................................................................................................................... 22 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTT........................................................................................................................................................... 21 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTCCT............................................................................................................................................................ 26 1 10 0.20 2 1 0 0 1 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTGT........................................................................................................................................................ 24 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.........................................TGGTATTGGGTAATTACTGTTTACTG................................................................................................................................. 26 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTGGA....................................................................................................................................................... 25 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.................TTTTGCACTCGGATGTGGCTCGT............................................................................................................................................................ 23 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
.....................GCACTCGGATGTGGCTCGTCTGGT....................................................................................................................................................... 24 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCCTC........................................................................................................................................................... 21 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0
................GTTTTGCACTCGGATGTGGCTCGTC........................................................................................................................................................... 25 0 10 0.20 2 2 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTC.............................................................................................................................................................. 18 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
................GTTTTGCACTCGGATGTGGCT............................................................................................................................................................... 21 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.................TTTTGCACTCGGATGTGGCTC.............................................................................................................................................................. 21 0 11 0.18 2 0 0 1 0 0 0 1 0 0 0
.....................GCACTCGGATGTGGCTCG............................................................................................................................................................. 18 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
........AATCAATTGTTTTGCACTCGG....................................................................................................................................................................... 21 0 11 0.18 2 0 0 0 0 2 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTCC............................................................................................................................................................. 25 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGA................................................................................................................................................................. 20 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGGCTG......................................................................................................................................................... 23 1 11 0.18 2 2 0 0 0 0 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGAA................................................................................................................................................................ 21 2 11 0.18 2 2 0 0 0 0 0 0 0 0 0
............AATTGTTTTGCACTCGGA...................................................................................................................................................................... 18 0 11 0.18 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................CTTGAAAAAAGCCGCTCACACACTGTGC... 28 2 12 0.17 2 0 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................TGAAAAAAAGCCGCTCACACACTGTGC... 27 3 12 0.17 2 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGCCG. 28 0 12 0.17 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................GTGAAAAAAGCCGCTCACACACTGTGC... 27 1 12 0.17 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TTAAAAAAGCCGCTCACACACTGTGC... 26 1 12 0.17 2 1 0 1 0 0 0 0 0 0 0
..............................TGTGGCTCGTCTGGTATTGGG................................................................................................................................................. 21 0 13 0.15 2 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................CTCAGGATCTGAAAAAAGCCGCTCACA........... 27 1 13 0.15 2 2 0 0 0 0 0 0 0 0 0
................................TGGCTCGTCTGGTATTGGGT................................................................................................................................................ 20 0 13 0.15 2 0 0 0 0 0 1 0 0 1 0
...........................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCG................. 24 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0
.........................TCGGATGTGGCTCGTCTGGTATTGG.................................................................................................................................................. 25 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CCTGGTGAATCAGGATCTGAAAAAAG.................... 26 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACT......... 28 1 14 0.14 2 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTT.............. 23 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................ATGAAAAAAGCCGCTCACACACTG...... 24 1 14 0.14 2 0 2 0 0 0 0 0 0 0 0
....................................................................................................................................................TACCTGGTGAATCAGGATCTG........................... 21 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGA..... 26 1 14 0.14 2 0 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACA........... 24 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................TCTGAAAAAAGCCGCTCACACA......... 22 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................ATCTGAAAAAAGCCGCTCACACACTG...... 26 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................ATCTGAAAAAAGCCGCTCACACAC........ 24 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCAA............ 25 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................AGGATCTGAAAAAAGCCGCTC.............. 21 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TGAGGATCTGAAAAAAGCCGCTCA............. 24 1 14 0.14 2 0 0 2 0 0 0 0 0 0 0
....................................................................................................................................................TACCTGGTGAATCAGGATCTGAAAAA...................... 26 0 14 0.14 2 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACA........... 18 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCC............. 24 1 14 0.14 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GAAAAAAGCCGCTCACACACTG...... 22 0 14 0.14 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TGAAAAAAGCCGCTCACACAC........ 21 0 14 0.14 2 0 0 1 1 0 0 0 0 0 0
...............................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACT........... 26 1 14 0.14 2 1 0 1 0 0 0 0 0 0 0
...........................................................................................TTGTAATTCTGTTGTGGCATTTTC................................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTGCGCTCGGATG.................................................................................................................................................................... 27 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
....TTGGAATCAATTGTTTTGCACTCGGATG.................................................................................................................................................................... 28 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.....TTGAATCAATTGTTTTGCACTCGGATG.................................................................................................................................................................... 27 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTGCACTCTGATG.................................................................................................................................................................... 27 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTGCACTCGGATA.................................................................................................................................................................... 27 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0
.......GAATCAATTGTTTTGCACTCGGATG.................................................................................................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..................TTTGCACTCGGATGTGGCTCGTCTT......................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....TTGTATCAATTGTTTTGCACTCGGAT..................................................................................................................................................................... 26 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0
....ATGGAATCAATTGTTTTGCACGCGGG...................................................................................................................................................................... 26 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0
....................TGCACTCGGATGTGGCTCCT............................................................................................................................................................ 20 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...............................................TGGGTAATTACTGTTTACTGTT............................................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GCAGATTACGTGGTGAACCAG................................. 21 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................TTTGCACTCGGATGTGGCTCCTC........................................................................................................................................................... 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTGCACTCGCA...................................................................................................................................................................... 25 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0
.........................................TGGTATTGGGTAATTACTGTTTACT.................................................................................................................................. 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...................TTGCACTCGGATGTGGCTCGTTA.......................................................................................................................................................... 23 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..............................................TTGGGTAATTACTGTTTACTG................................................................................................................................. 21 0 10 0.10 1 0 0 0 0 1 0 0 0 0 0
...................................................TAATTACTGTTTACTGTTTAC............................................................................................................................ 21 0 10 0.10 1 0 0 0 0 1 0 0 0 0 0
..........TCAATTGTTTTGCACTCGGATGTG.................................................................................................................................................................. 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCGCATGTGGCTCGTCTGGTA...................................................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...CATGGAATCAATTGTTTTGCACTC......................................................................................................................................................................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TTCACTCGGATGTGGCTCGTCTGGT....................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................................TGGTATTGGGTAATTACTGTTTACTA................................................................................................................................. 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGATCGTCTGG........................................................................................................................................................ 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................TGTGGCATTTTCTTTTGTGGCTTTTG................................................................... 26 3 10 0.10 1 0 0 0 0 1 0 0 0 0 0
..................TTTGCACTCGGATGTGGCTCGTCTGGT....................................................................................................................................................... 27 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........CAATTGTTTTGCACTCGGATGT................................................................................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............AATTGTTTTGCACTCGGATGTGGC................................................................................................................................................................ 24 0 10 0.10 1 0 1 0 0 0 0 0 0 0 0
...................ATGCACTCGGATGTGGCTCGTCTGG........................................................................................................................................................ 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............AATTGTTTTGCACTCGGATG.................................................................................................................................................................... 20 0 10 0.10 1 0 0 0 1 0 0 0 0 0 0
........AATCAATTGTTTTGCACTCGGATG.................................................................................................................................................................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...CATGGAATCAATTGTTTTGCACC.......................................................................................................................................................................... 23 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
............................................TATTGGGTAATTACTGTTTACTGTT............................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTT......................................................................................................................................................... 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................TTTGCACTCGGATGTGGCTCGTCT.......................................................................................................................................................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTCCACTCGGA...................................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..........TCAATTGTTTTGCACTCGGATGTGGCTT.............................................................................................................................................................. 28 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCTGATGTGGCTCGTCTGG........................................................................................................................................................ 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.................TTTTGCACTCGGATGTGGCTCCTCCT......................................................................................................................................................... 26 3 10 0.10 1 0 0 0 0 0 1 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTTAAA...................................................................................................................................................... 26 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
......................CACTCGGATGTGGCTCGTCTG......................................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........ATCAATTGTTTTGCACTCGGATGTGG................................................................................................................................................................. 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..............................................TTGGGTAATTACTGTTTACTGT................................................................................................................................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....................GCACTCGGATGTGGCTCGTCCGG........................................................................................................................................................ 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....GTGGAATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.............ATTGTTTTGCACTCGGATGTG.................................................................................................................................................................. 21 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....................GCACTTGGATGTGGCTCGTCTGG........................................................................................................................................................ 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTCGTCT.......................................................................................................................................................... 28 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................TTTGCACTCGGATGTGGCTCGTCTGT........................................................................................................................................................ 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....TGGAATCAACTGTTTTGCACTCGGA...................................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...................TTGCACTCGGATGTGGCTCGTCTGT........................................................................................................................................................ 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTGTTAA..................................................................................................................................................... 27 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............AATTGTTTTGCACTCGGATGT................................................................................................................................................................... 21 0 10 0.10 1 0 0 0 1 0 0 0 0 0 0
.....TGGAGTCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
......GTAATCAATTGTTTTGCACTCGGATG.................................................................................................................................................................... 26 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
.....TGGAAGCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 25 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
..........TCAATTGTTTTGCACTCGGATGT................................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....ATGGAATCAATTGTTTTGCACTCGGAT..................................................................................................................................................................... 27 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........CAATTGTTTTGCACTCGGATGTGGCT............................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TTCACTCGGATGTGGCTCGTCTGG........................................................................................................................................................ 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..........TCAATTGTTTTGCACTCGGATGTGAAA............................................................................................................................................................... 27 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTGCACTCGGAC..................................................................................................................................................................... 26 1 10 0.10 1 0 0 1 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTGCAC........................................................................................................................................................................... 20 0 10 0.10 1 0 0 0 0 0 0 0 1 0 0
...........................................GTATTGGGTAATTACTGTTTA.................................................................................................................................... 21 0 10 0.10 1 0 1 0 0 0 0 0 0 0 0
...................TTGCACTCGGATGTGGCTCCTC........................................................................................................................................................... 22 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....ATCGAATCAATTGTTTTGCACTC......................................................................................................................................................................... 23 1 10 0.10 1 0 0 0 0 0 0 0 1 0 0
.....................GCACTCGGATGTGGCTCGTCTGGTA...................................................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................................TTGCATTGGGTAATTACTGTTTACC.................................................................................................................................. 25 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0
.........................................TGGTATTGGGGAATTACTGTTTACGG................................................................................................................................. 26 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0
....................TGCACTCGGACGTGGCTCGTCTGG........................................................................................................................................................ 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
AGACATGGAATCAATTGTTTTGCACT.......................................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCCTCTCG........................................................................................................................................................ 24 2 10 0.10 1 0 0 0 0 0 1 0 0 0 0
.......................ACTCGGATGTGGCTCGTCTGGT....................................................................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....AGGAATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 25 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0
.......................................TCTGGTATTGGGTAATTACTGTTT..................................................................................................................................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....................GCACTCGGATGTGGCTCGTCTTG........................................................................................................................................................ 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..................TTTGCACTCGGATGTGGCTCGTCTAAA....................................................................................................................................................... 27 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
......................CACTCGGATGTGGCTCGTCTGG........................................................................................................................................................ 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.....TGGAATCAATTGTTTTGCACTCGTA...................................................................................................................................................................... 25 1 10 0.10 1 0 0 0 0 0 1 0 0 0 0
...........CAATTGTTTTGAACTCGGATG.................................................................................................................................................................... 21 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTTG........................................................................................................................................................ 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTGGGA...................................................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..........TCAATTGTTTTGCACTCGGGTGTGG................................................................................................................................................................. 25 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTCTGA........................................................................................................................................................ 24 1 10 0.10 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGTTTT......................................................................................................................................................... 23 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..ACATGGAATCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 28 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
................................TGGCTCGTCTGGTATTGGGTAATTAC.......................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGTTGTG.................................................................................................................................................................. 20 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0
....................TGCGCTCGGATGTGGCTCGTCT.......................................................................................................................................................... 22 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....TGGAATCACTTGTTTTGCACTCGGA...................................................................................................................................................................... 25 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0
...........CAATTGTTTTGCACTCGGAT..................................................................................................................................................................... 20 0 11 0.09 1 0 0 0 0 0 0 0 1 0 0
..............................................................TACTGTTTACTGTTTACATC.................................................................................................................. 20 0 11 0.09 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................GCTCCCTTGCTCGTTACCAGG......................................... 21 3 11 0.09 1 0 0 0 0 0 1 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTA.............................................................................................................................................................. 24 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
..................CTTGCACTCGGATGTGGCTCG............................................................................................................................................................. 21 1 11 0.09 1 0 0 0 1 0 0 0 0 0 0
...............................................................ACTGTTTACTGTTTACATCCG................................................................................................................ 21 0 11 0.09 1 0 0 0 0 1 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTCGC............................................................................................................................................................ 26 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.......................................TCTGGTATTGGGTAATTACAAA....................................................................................................................................... 22 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.................TTTTGCACTCGGATGTGGCT............................................................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.................TTTTGAACTCGGATGTGGCTC.............................................................................................................................................................. 21 1 11 0.09 1 0 0 0 0 1 0 0 0 0 0
..............TTGTTTTGCACTCGGATTTGGC................................................................................................................................................................ 22 1 11 0.09 1 0 0 0 0 0 0 1 0 0 0
...................TTGCACTCGGATGTGGCTCGG............................................................................................................................................................ 21 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
..................TTTGCACTCGGATGTGGCT............................................................................................................................................................... 19 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGAA............................................................................................................................................................... 23 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGA................................................................................................................................................................ 22 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....TGCAAGCAATTGTTTTGCACTCGGA...................................................................................................................................................................... 25 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGCAA.......................................................................................................................................................... 22 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGA................................................................................................................................................................. 21 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......GTAATCAATTGTTTTGCACTCGGAT..................................................................................................................................................................... 25 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTCCC............................................................................................................................................................ 26 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGGCTCCCCC.......................................................................................................................................................... 27 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.................TTTTGAACTCGGATGTGGC................................................................................................................................................................ 19 1 11 0.09 1 0 0 0 0 1 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGC............................................................................................................................................................ 20 1 11 0.09 1 0 0 0 0 0 1 0 0 0 0
...............TGTTTTGCACTCGGATGTGAC................................................................................................................................................................ 21 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
..............TGGTTTTGCACTCGGATGTGGCTCC............................................................................................................................................................. 25 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0
.................TTTTGCACTCGGATGTGGCTCCCCC.......................................................................................................................................................... 25 3 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.................TTTTGCACTCGGATGTGGCTCGGC........................................................................................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.................TTTTGCACTCGGATGTGG................................................................................................................................................................. 18 0 11 0.09 1 1 0 0 0 0 0 0 0 0 0
...............TGCTTTGCACTCGGATGTGG................................................................................................................................................................. 20 1 11 0.09 1 0 0 1 0 0 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGGCTCCCC........................................................................................................................................................... 26 2 11 0.09 1 0 1 0 0 0 0 0 0 0 0
...............TGTTTTGCACTCGGATGTGGCTTT............................................................................................................................................................. 24 2 11 0.09 1 1 0 0 0 0 0 0 0 0 0
..............TTGTTTTGCACCCGGATGTGGCT............................................................................................................................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
........AATCAATTGTTTTGCACTCG........................................................................................................................................................................ 20 0 11 0.09 1 0 0 1 0 0 0 0 0 0 0
.........ATCAATTGTTTTGCACTCGG....................................................................................................................................................................... 20 0 11 0.09 1 0 0 0 0 1 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGGC........................................................................................................................................................... 21 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.................TTTTGCACTCGGATGTGGCTCCC............................................................................................................................................................ 23 2 11 0.09 1 0 0 0 0 0 0 1 0 0 0
....................TGCACTCGGATGTGGCTCGCCT.......................................................................................................................................................... 22 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGCCTG......................................................................................................................................................... 23 1 11 0.09 1 1 0 0 0 0 0 0 0 0 0
....................TGCACTCGGATGTGGCTCGCTTGGTG...................................................................................................................................................... 26 3 11 0.09 1 0 0 0 0 0 1 0 0 0 0
..............TTGTTTTGCACTCGGATGTGGCTCCCC........................................................................................................................................................... 27 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0
.................TTTTGCACTCGGATGTGGC................................................................................................................................................................ 19 0 11 0.09 1 0 0 0 0 0 1 0 0 0 0
.................TTTTGCACTCGGATGTGGCTCCCC........................................................................................................................................................... 24 2 11 0.09 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TCTGTACCTTAGTTAACAAAACGTGAGCCTACACCGAGCAGACCATAACCCATTAATGACAAATGACAAATGACAAATGTAGGCATTTGTGAACATTAAGACAACACCGTAAAAGAAAACACCGAACCGAGGGGCGAGGGAACGTCCAATGGACCACTTAGTCCTAGACTTTTTTCGGCGAGTGTGTGACACGGCG
*********************************************************************************......((((.((...(((((((((((....)))))))...))))....))...)))).....**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902011
testis
 M059
embryo
 M022
male body		 GSM444067
head
 M062
head
 SRR902010
ovaries
..................................................................................................................................................CAATGGACCACTTAGTCCTAGAC........................... 23 0 14 0.43 6 6 0 0 0 0 0 0 0
......................................................................................................................................................GGACCACTTAGTCCTAGACTTTTTT..................... 25 0 14 0.43 6 3 0 2 0 0 0 0 1
...............................................................................................................................................................................CGGCGAGTGTGTGACACGGC. 20 0 12 0.42 5 0 4 1 0 0 0 0 0
...............................................................................TAGGCATTTGTGAACATTAAGACAA............................................................................................ 25 0 9 0.33 3 0 2 0 0 1 0 0 0
.............................................................AATGACAAATGACAAATGTAGGCAT.............................................................................................................. 25 0 10 0.30 3 0 0 3 0 0 0 0 0
........................................................................................................................................................ACCACTTAGTCCTAGACTTTTTT..................... 23 0 14 0.29 4 4 0 0 0 0 0 0 0
.................................CCGAGCAGACCATAACCCAT............................................................................................................................................... 20 0 11 0.27 3 0 1 2 0 0 0 0 0
................................................................GACAAATGACAAATGTAGGC................................................................................................................ 20 0 11 0.27 3 0 0 3 0 0 0 0 0
.......................................................................................TGTGAACATTAAGACAACACCGTAAAAG................................................................................. 28 0 8 0.25 2 0 0 0 2 0 0 0 0
.................................................................................................AAGACAACACCGTAAAAGAAAACACCGA....................................................................... 28 0 8 0.25 2 0 0 2 0 0 0 0 0
.........................................................................................................................................................CCACTTAGTCCTAGACTTTTTTCG................... 24 0 13 0.23 3 2 0 1 0 0 0 0 0
.......................................................................................................................CACCGAACCGAGGGGCGAGGGAACGT................................................... 26 0 9 0.22 2 0 0 2 0 0 0 0 0
.........................................................................................................................................................CCACTTAGTCCTAGACTTTTTT..................... 22 0 14 0.21 3 3 0 0 0 0 0 0 0
.......................................................................................................................................................GACCACTTAGTCCTAGACTTTTTT..................... 24 0 14 0.21 3 3 0 0 0 0 0 0 0
.........................................................................................................................................................CCACTTAGTCCTAGACTTTTT...................... 21 0 14 0.21 3 2 0 0 1 0 0 0 0
.................................................................................................................................................CCAATGGACCACTTAGTCCTAGAC........................... 24 0 14 0.21 3 2 0 0 0 0 0 1 0
..............................ACACCGAGCAGACCATAACCCATTAAT........................................................................................................................................... 27 0 10 0.20 2 0 2 0 0 0 0 0 0
................................................................GACAAATGACAAATGTAGGCAT.............................................................................................................. 22 0 11 0.18 2 0 0 2 0 0 0 0 0
................................................................GACAAATGACAAATGTAGGCA............................................................................................................... 21 0 11 0.18 2 0 0 2 0 0 0 0 0
.......................................................................................................................................................GACCACTTAGTCCTAGACTTTTTTCG................... 26 0 13 0.15 2 2 0 0 0 0 0 0 0
.............................................................................................................................................................TTAGTCCTAGACTTTTTTCGGCGAGT............. 26 0 13 0.15 2 0 0 2 0 0 0 0 0
.............................TACACCGAGCAGACCATAACC.................................................................................................................................................. 21 0 13 0.15 2 0 2 0 0 0 0 0 0
......................................................................................................................................................GGACCACTTAGTCCTAGACTTTTTTCG................... 27 0 13 0.15 2 2 0 0 0 0 0 0 0
...........................CCTACACCGAGCAGACCATAACCC................................................................................................................................................. 24 0 13 0.15 2 2 0 0 0 0 0 0 0
.........................AGCCTACACCGAGCAGACCAT...................................................................................................................................................... 21 0 13 0.15 2 1 1 0 0 0 0 0 0
....................................................................................................................................................ATGGACCACTTAGTCCTAGAC........................... 21 0 14 0.14 2 2 0 0 0 0 0 0 0
......................................................................................................................................................................GACTTTTTTCGGCGAGTGT........... 19 0 14 0.14 2 0 1 1 0 0 0 0 0
.......................................................................................................................................GAGGGAACGTCCAATGGACCACT...................................... 23 0 9 0.11 1 0 1 0 0 0 0 0 0
.....................................................................................................................................TTGAGGGAACGTCCAATGGACC......................................... 22 2 9 0.11 1 0 1 0 0 0 0 0 0
..........................................................................................................................CGAACCGAGGGGCGAGGGAACGT................................................... 23 0 9 0.11 1 0 1 0 0 0 0 0 0
.............................................................................................................................CCCGAGGGGCGAGGGAACGT................................................... 20 1 9 0.11 1 0 1 0 0 0 0 0 0
...........................................................................................................................GAACCGAGGGGCGAGGGAACGT................................................... 22 0 9 0.11 1 0 0 1 0 0 0 0 0
..............................................................................GTAGGCATTTGTGAACATTAAGA............................................................................................... 23 0 9 0.11 1 0 0 0 0 1 0 0 0
....................ACGTGAGCCTACACCGAGCAGACCA....................................................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0
......................GTGAGCCTACACCGAGCAGAC......................................................................................................................................................... 21 0 10 0.10 1 0 1 0 0 0 0 0 0
...................................GAGCAGACCATAACCCATTAATGACAAAT.................................................................................................................................... 29 0 10 0.10 1 0 1 0 0 0 0 0 0
.............................................................AATGACAAATGACAAATGTAGGCATT............................................................................................................. 26 0 10 0.10 1 0 0 1 0 0 0 0 0
..................AAACGTGAGCCTACACCGAGCAGACCAT...................................................................................................................................................... 28 0 10 0.10 1 0 1 0 0 0 0 0 0
......CCTTAGTTAACAAAACGTGAGCCT...................................................................................................................................................................... 24 0 10 0.10 1 1 0 0 0 0 0 0 0
...................AACGTGAGCCTACACCGAGCAGA.......................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0 0
.CTGTACCTTAGTTAACAAAACGTGAG......................................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0
......................................CAGACCATAACCCGTTAATGA......................................................................................................................................... 21 1 10 0.10 1 0 0 0 1 0 0 0 0
......CCTTAGTTAACAAAACGTGAGCC....................................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0 0
.......CTTAGTTAACAAAACGTGAGCCT...................................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0 0
..................AAACGTGAGCCTACACCGAGC............................................................................................................................................................. 21 0 11 0.09 1 0 1 0 0 0 0 0 0
...............................CACCGAGCAGACCATAACCCATT.............................................................................................................................................. 23 0 11 0.09 1 1 0 0 0 0 0 0 0
.................................................................ACAAATGACAAATGTAGGCAT.............................................................................................................. 21 0 11 0.09 1 0 0 1 0 0 0 0 0
.................AAAACGTGAGCCTACACCGA............................................................................................................................................................... 20 0 11 0.09 1 0 1 0 0 0 0 0 0
...................................GAGCAGACCATAACCCATT.............................................................................................................................................. 19 0 11 0.09 1 1 0 0 0 0 0 0 0
................................................................GACAAATGACAAATGTAGGCATT............................................................................................................. 23 0 11 0.09 1 0 0 1 0 0 0 0 0
............................CTACACCGAGCAGACCATAACCCATT.............................................................................................................................................. 26 0 11 0.09 1 0 1 0 0 0 0 0 0
.............................................................................................................................................................................ATCGGCGAGTGTGTGACACG... 20 1 12 0.08 1 0 1 0 0 0 0 0 0
.CTGTACCTTAGTTAACAAAACGTCA.......................................................................................................................................................................... 25 1 12 0.08 1 0 1 0 0 0 0 0 0
...GTACCTTAGTTAACAAAACGT............................................................................................................................................................................ 21 0 12 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................TCGGCGAGTGTGTGACACGG.. 20 0 12 0.08 1 0 1 0 0 0 0 0 0
..........................GCCTACACCGAGCAGACCA....................................................................................................................................................... 19 0 13 0.08 1 1 0 0 0 0 0 0 0
...........................CCTACACCGAGCAGACCATAA.................................................................................................................................................... 21 0 13 0.08 1 0 1 0 0 0 0 0 0
..........................GCCTACACCGAGCAGACCAT...................................................................................................................................................... 20 0 13 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................................ACCACTTAGTCCTAGACTTTTTTC.................... 24 0 13 0.08 1 1 0 0 0 0 0 0 0
.........................AGCCTACACCGAGCAGACCATAAC................................................................................................................................................... 24 0 13 0.08 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TTCGGCGACTGTGTGCGACGGC. 22 3 13 0.08 1 0 0 0 0 0 1 0 0
...........................CCTACACCGAGCAGACCATA..................................................................................................................................................... 20 0 13 0.08 1 0 1 0 0 0 0 0 0
.............................TACACCGAGCAGACCATAA.................................................................................................................................................... 19 0 13 0.08 1 1 0 0 0 0 0 0 0
..............................ACACCGAGCAGACCATAACCC................................................................................................................................................. 21 0 13 0.08 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................GCGAGTGTGTGACACGGC. 18 0 13 0.08 1 1 0 0 0 0 0 0 0
............................CTACACCGAGCAGACCATAAC................................................................................................................................................... 21 0 13 0.08 1 0 1 0 0 0 0 0 0
.........................AGCCTACACCGAGCAGACCATAA.................................................................................................................................................... 23 0 13 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................TAGTCCTAGACTTTTTTCGGCGAGT............. 25 0 13 0.08 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................ACACTTAGTCCTAGACTTTTTTCG................... 24 1 13 0.08 1 1 0 0 0 0 0 0 0
........................................................................................................................................................ACCACTTAGTCCTAGACTTTTT...................... 22 0 14 0.07 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TTTTTCGGCGAGTGTGTGACA..... 21 0 14 0.07 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................GACTTTTTTCGGCGAGTGTGTGACA..... 25 0 14 0.07 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................TAGACTTTTTTCGGCGAGTGT........... 21 0 14 0.07 1 0 1 0 0 0 0 0 0
.................................................................................................................................................CCAATGGACCACTTAGTCCTAGA............................ 23 0 14 0.07 1 1 0 0 0 0 0 0 0
...................................................................................................................................................AATGGACCACTTAGTCCTAGAC........................... 22 0 14 0.07 1 1 0 0 0 0 0 0 0
..................................................................................................................................................CAATGGACCACTTAGTCCTAGACT.......................... 24 0 14 0.07 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................GACTTTTTTCGGCGAGTGTGT......... 21 0 14 0.07 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................TTTTTTCGGCGAGTGTGTG........ 19 0 14 0.07 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................AGACTTTTTTCGGCGAGTGTGTGA....... 24 0 14 0.07 1 0 1 0 0 0 0 0 0
..................................................................................................................................................CAATGGACCACTTAGTCCTAGA............................ 22 0 14 0.07 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................CGGCGAGAGTGTGACACTAC. 20 3 15 0.07 1 0 0 0 0 0 1 0 0
............................................................................................................................AACGGACGGGCGAGGTAACG.................................................... 20 3 20 0.05 1 1 0 0 0 0 0 0 0
............................AAACACCGAGCAGACCAT...................................................................................................................................................... 18 2 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1e:1163292-1163487 + dps_2616 A-------GACATGGAATCAATTGTTTTGCACTCGGATGTGGCTCGTCTGGTATTGGGTAATTA-------C-----------------TGTTTACTGTT----------------------TAC----------TGTT---------------TACA-------------TCCGTAA---------A----C-ACTTGTAA-TT---------------CTGTT---------GTGGCATTTTCTTTTGTGG-------CTTGGCTCCCCGCTCCCTTGCAGGTTACCTGGTGAATCAGGATCTGAAAAAAGCCGCTCACACACTGTGCCGC
droPer2 scaffold_30:31635-31823 - A-------GACATGGAATCAATTGTTTTGCACTCGGATGTGGCTCGTCTGGTATTGGGTAATTA-------C-----------------TGTTTACTGT---------------------------------------T---------------TACA-------------TCCGTAA---------A----C-ACTTGTAA-TT---------------CTGTT---------GTGGCATTTTCTTTTGTGG-------CTTGGCTCCCCGCTCCCTTGCAGGTTACCTGGTGAATCAGGATCTGAAAAAAGCCGCTCACACACTGTGCCGC
droWil2 scf2_1100000004909:7480162-7480356 + A-------AACATGGAATCAATTGTTTTACATGCAGATGTAGCACGTCTGGTTCTTGGTAAGTA-------ATGCCC--TTCCGTTCTTTAGGA--AATCGACATGCTGCA--------------TATGGCGTCTCC-----------------TACA-------------CCAGA--------------AA-A-------T-GA---------------AAATT---------CTTTGG-----------AATTTT------------------ATTTGCAGGCTATTTGGTTAAACAAAACCTGCGACGAGCGGCTTACAGTTTATGCCGA
droVir3 scaffold_12970:7558539-7558700 - A-------AAAATGGAATCAATTGTGCTGCATTCTGACATCGCGCGTCTAATTTTGGGTGAGTC-------T-----------------GGT------------------------AGT--------------CCCATGT----------CGTT-----------------CG-----GTG---------CC-T-------T-TA---------------ATGCC---------TTTCAAT-GT----C-----TGC------------------ATTTGCAGGATATTTCATAAATAACAATCTAAAACGGGCGGCGTTAACACTGTGCCGC
droMoj3 scaffold_6482:2162390-2162550 + A-----------TGGAATCAATTGTGTTGCATTCGGATATCGCGCGTCTCGTTTTGGGTGGGTT-------TTCAAC--TCTTGCA-----------------------------------------------TT---GTAAAATCA---T----------------------------ATGC------CTT-A-------T-TA---------------ACAGT---TA-TT-GCCGT------------------------------------ATTTTCAGGCTACTTTGTAAATAACAATTTGAGACGTGCGGCACTTTCATTGTGTCGC
droGri2 scaffold_15203:7054032-7054214 + A-------GA-ATGAAATCCATTGTACTGCATTCGGACATAGCGCGTCTAATTTTAGGTAAGTA-------GTCTG---------------G------------------------GTCTCTTGC----AGACGCTGGTC----------TGA-----TC-------------------GATC------GAC-A-------T-TTC--------------ATAA--ATTGCGCTTGACAAT-TT----C----------------------GGCATCTATTAGGCTATTTATTAAATAATGATCTGAGGCATGCGGCGCTAACGTTTTGTCGC
droAna3 scaffold_13047:999468-999635 - A-------GTCATGGAGTCCATAGTGCTGCACTCTGATGTTGCGCGTCTGGTTTTGGGTGAGTC-------C-----------------TGT------------------------ACC----------------------------------------------------TCCAGTT---------A----T-TCCTGAAT-TTCTTACTGAGCTACTTACGTT-----------------------TGGGA-------C-------------TCATTCCAGGGTACTTGGTGAATCAGAACCTGACGCGAGCCGCTAACACACTGTGCCGC
droBip1 scf7180000396431:773915-774080 - A-------GTCATGGAGTCCATAGTGCTGCACTCTGATGTTGCACGTCTAGTTTTGGGTGAGTC-------C-----------------TGT------------------------ACC----------------------------------------------------TCTAGTT---------G----G-TCTTGAAGCTGTTTACTTAGCTCCTT----------------------GT----TGGCA-------T-------------TCATTTCAGGCTACTTGGTGAATCAGAATCTGACGCGAGCCGCTAACACACTGTGCCGC
droKik1 scf7180000302704:121664-121817 + A-----------TGGACTCGATCGTTCTGCACTCGGATGTGGCCCGGCTTGTTCTGGGTGAGTC-------TACTCC--G-----------------------------------------------------------------------------------------------------------------------------------------------CG---------GCGACGTTCTTTCTTCTTG-------CTAATGCCTTTGCCCGCTCGCAGGCTACTTGGTTAACCAGAATCTGCGGCGAGCGGCCCATACCCTGTGTCGC
droFic1 scf7180000454073:2050038-2050208 - T-------GCCATGGAGTCAATTGTCCTTCATTCCGATGTAGCTCGTTTGGTTCTAGGTAAGTTGTTGGTTTTCCCT--GC------------------------------------------------------CCTGC----------C------------------------------GC------TAT-A-------T-TC---------------ATGATTATTTTTCTCGCCA-------------ATTATATT-----------G-----GTATAGGCTACTTGGTTAACCAGAATCTGGAAAAGGCCGCACACACTTTGTGTCGC
droEle1 scf7180000491018:135635-135803 + A-------GCCATGGAATCGATTGTGCTGCATTCGGATGTGGCGCGCTTGGTCCTAGGTGAGTT-------T-----------------CGTTTGCTGC--------------------TCCTGC-------------------------TGT-TGGA-------------TCCGTGA---------A--T-CA-------T-CC---------------ATGAT---------CCATCA----------------TATG-----------C---ATATGTAGGCTATCTGGTCAACCAGAATCTGAAGCGGGCGGCCCACACGCTGTGCCGC
droRho1 scf7180000779966:30909-31068 - A-------GCCATGGAGTCAATTGTGCTGCATTCGGATGTAGCGCGCTTGGTCCTGGGTAAGTT-------T-CCCT--AGAGA-T-----------------------------------------------TCCCTAC----------CGG-----CTGATTTACGAGC-----AA---------A----G-----------------------------GC-----------TTGCAC-----------------------------------TTTATAGGCTACCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACTCTGTGTCGC
droBia1 scf7180000301760:5106666-5106859 - A-------GTCATGGAGTCGATTGTCCTGCACTCGGATGTGGCGCGCCTGGTTCTGGGTGAGTT-------C-----------------CATTT--CGTTTTG---TTTCGCTTGGGATTC----CAATGGACTCCCTGG----------CTG-----C-------CGAGC-------AGCATGAAATTCTT-G-------T-TT---------------GTGCT---------GGC-------------------------------------TCTTTCCAGGCTATCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACCCTGTGTCGC
droTak1 scf7180000415696:92186-92364 - A-------GCCATGGAGTCGATAGTCCTGCACTCGGATGTGGCGCGCCTGGTCCTGGGTGAGTT-------GCCCCCTTGGAGGTT---------------------------------CC----CATTGGAAT---------TCCATATTCCC-----------------CC-----AGC---------AT-A-------T-TC---------------ATGAT---------TTTTGG------------TTTAT------------------ATTTTCAGGCTACCTGGTCAACCAGAATCTCAAGAGGGCCGCCCACACCCTGTGCCGC
droEug1 scf7180000409032:824496-824672 + A-------GCCATGGAGTCGATTGTCTTACACTCGGATGTGGCACGCTTGGTCCTGGGTGAGTT-------T-----------------TATTG--TGTTTAAAATTTTCG--------------CAAAGGATTCTCTGC----------A----------------------------GCAC------GAT-A-------T-TC---------------ATGTT---------GCCTGG------------T-------T-------------GCAATTTAGGCTATCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACTCTGTGTCGG
dm3 chrX:9137084-9137241 - A-------GCCATGGAGTCGATTGTCCTGCATTCGGACGTGGCTCGCTTGGTCCTGGGTAGGTT-------TTCCCT--GGACGCT-----------------------------------------------TTTCTAG----------C----------------------------TCGC------AAT-A-------T-TT---------------ATGCT---------CTTCCAT-----------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC
droSim2 x:8683207-8683364 - A-------GCCATGGAGTCGATTGTCCTGCATTCGGACGTGGCTCGCTTGGTCCTGGGTAGGTT-------TTCCCT--GGACGCT-----------------------------------------------TTCCTAG----------C----------------------------TCGC------GAT-A-------T-TT---------------ATGCT---------GTTCCAT-----------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC
droSec2 scaffold_68:24792-24949 - A-------GCTATGGAGTCGATTGTCCTGCATTCGGACTTGGCTCGCTTGGTCCTGGGTAGGTT-------TTCCCT--GGACGTT-----------------------------------------------TTCCTAA----------C----------------------------TTGC------GAT-A-------T-TT---------------ATGCT---------GTTCCAT-----------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC
droYak3 X:17733177-17733340 - AAAGTCCAGCCATGGAGTCGATTGTCCTGCATTCGGATGTGGCTCGCTTGGTCCTGGGTCAGTT-------TTCCCT--GCATGAT-----------------------------------------------TTCCTGA----------C----------------------------GCTC------TAT-A-------C-TC---------------ATGCT---------GTTTCA------------------------------------TTTGTAGGATACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGC
droEre2 scaffold_4690:5978218-5978374 + A-------GCCATGGAGTCGATTGTCCTGCATTCGGATGTGGCTCGCTTGGTCCTGGGTAAGTT-------TTCCCT--GGATGCT-----------------------------------------------TTCCTGA----------C----------------------------GAGC------GAT-A-------T-TT---------------ATGCT---------GTTTCA------------------------------------TTTTTAGGCTATCTAGTCAACCAGAATCTAATACGGGCCGCACACACTCTGTGTCGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
A-------GACATGGAATCAATTGTTTTGCACTCGGATGTGGCTCGTCTGGTATTGGGTAATTA-------C-----------------TGTTTACTGTT----------------------TAC----------TGTT---------------TACA-------------TCCGTAA---------A----C-ACTTGTAA-TT---------------CTGTT---------GTGGCATTTTCTTTTGTGG-------CTTGGCTCCCCGCTCCCTTGCAGGTTACCTGGTGAATCAGGATCTGAAAAAAGCCGCTCACACACTGTGCCGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............TGGAATCAATTGTTTTGCACTCGGA........................................................................................................................................................................................................................................................................................................251034.203420227900019870
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACA...........261426.21367035751002200
................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGC...261222.002640180611007420
...........................TGCACTCGGATGTGGCTCGTCTGG..........................................................................................................................................................................................................................................................................................241016.90169016410103000
............TGGAATCAATTGTTTTGCACTCGGATG......................................................................................................................................................................................................................................................................................................27915.441390125100011110
..............................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTG......251411.00154014530101400
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCAC............251410.141420125170000000
...........................TGCACTCGGATGTGGCTCGTCTG...........................................................................................................................................................................................................................................................................................23109.909909810000000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACA.........28148.71122011820000200
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACAC........29146.799508950001000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACAC..........27146.509108360002000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCA.............24146.439008620101000
............TGGAATCAATTGTTTTGCACTCGG.........................................................................................................................................................................................................................................................................................................24105.105103700000950
...........................TGCACTCGGATGTGGCTCGTCT............................................................................................................................................................................................................................................................................................22105.005005000000000
.....................TTGTTTTGCACTCGGATGTGGC..................................................................................................................................................................................................................................................................................................22114.915403910407300
.....................TTGTTTTGCACTCGGATGTGGCTC................................................................................................................................................................................................................................................................................................24114.735214620001200
...........................TGCACTCGGATGTGGCTCGTC.............................................................................................................................................................................................................................................................................................21104.104104100000000
.....................TTGTTTTGCACTCGGATGTGG...................................................................................................................................................................................................................................................................................................21114.094504100003010
..............................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGTGC...28124.004804150000200
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTC..............23143.645104630010010
................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTG....25123.253903110000520
...........................TGCACTCGGATGTGGCTCGTCTGGT.........................................................................................................................................................................................................................................................................................25102.902902900000000
.........................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACA...........25142.503503400000100
.................TCAATTGTTTTGCACTCGGATGTGG...................................................................................................................................................................................................................................................................................................25102.202201900000102
.............GGAATCAATTGTTTTGCACTCGGA........................................................................................................................................................................................................................................................................................................24102.002002000000000
.................................................................................................................................................................................................................................................................................................................GAAAAAAGCCGCTCACACACTGTGC...25122.002402310000000
......................TGTTTTGCACTCGGATGTGGCTC................................................................................................................................................................................................................................................................................................23111.912102000000100
......................TGTTTTGCACTCGGATGTGGC..................................................................................................................................................................................................................................................................................................21111.822001200212300
......................TGTTTTGCACTCGGATGTGGCTCGTC.............................................................................................................................................................................................................................................................................................26101.801801800000000
............TGGAATCAATTGTTTTGCACTCGGAT.......................................................................................................................................................................................................................................................................................................26101.701701310000300
.....................TTGTTTTGCACTCGGATGTGGCT.................................................................................................................................................................................................................................................................................................23111.551701610000000
.....................TTGTTTTGCACTCGGATGTGGCTCG...............................................................................................................................................................................................................................................................................................25111.551701600100000
..............................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACAC........23141.502101600000500
................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTG......23141.502102000100000
..............................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGT.....26141.432001610000300
...........ATGGAATCAATTGTTTTGCACTCGGA........................................................................................................................................................................................................................................................................................................26101.401401100000210
.................TCAATTGTTTTGCACTCGGATGTGGC..................................................................................................................................................................................................................................................................................................26101.40140820102100
............TGGAATCAATTGTTTTGCACTCG..........................................................................................................................................................................................................................................................................................................23101.301301210000000
.....................TTGTTTTGCACTCGGATGTGGCTCGT..............................................................................................................................................................................................................................................................................................26101.301301300000000
............................GCACTCGGATGTGGCTCGTCTGG..........................................................................................................................................................................................................................................................................................23101.301301300000000
...............................................................................................................................................................................................................................................................................................................CTGAAAAAAGCCGCTCACACACTG......24141.291801700000100
..............................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGTG....27121.171401110000200
.........................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACAC..........26141.141601600000000
............................GCACTCGGATGTGGCTCGTCTG...........................................................................................................................................................................................................................................................................................22101.101101100000000
.....................TTGTTTTGCACTCGGATGTG....................................................................................................................................................................................................................................................................................................20111.091201000001100
......................TGTTTTGCACTCGGATGTGGCTCG...............................................................................................................................................................................................................................................................................................24111.091201200000000
....................................................................................................................................................................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCGC................25131.00130810000400
......................TGTTTTGCACTCGGATGTGGCT.................................................................................................................................................................................................................................................................................................22110.91100900100000
...........................TGCACTCGGATGTGGCTCG...............................................................................................................................................................................................................................................................................................19110.911001000000000
..........................TTGCACTCGGATGTGGCTCGTCTGG..........................................................................................................................................................................................................................................................................................25100.9090800001000
.....................TTGTTTTGCACTCGGATGTGGCTCGTC.............................................................................................................................................................................................................................................................................................27100.9090900000000
..............................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACT.......24140.86120810000300
.........................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACACA.........27140.861201200000000
......................TGTTTTGCACTCGGATGTGG...................................................................................................................................................................................................................................................................................................20110.8290610001010
.........................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCAC............24140.71100900001000
.................TCAATTGTTTTGCACTCGGATGTGGCT.................................................................................................................................................................................................................................................................................................27100.7070600000100
...........................TGCACTCGGATGTGGCTCGT..............................................................................................................................................................................................................................................................................................20100.7070700000000
...........................TGCACTCGGATGTGGCTCGTCTGGG.........................................................................................................................................................................................................................................................................................25100.7070700000000
.............GGAATCAATTGTTTTGCACTCGGATG......................................................................................................................................................................................................................................................................................................2690.6760600000000
................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGT.....24140.6490700000200
............................GCACTCGGATGTGGCTCGTCT............................................................................................................................................................................................................................................................................................21100.6060600000000
.............GGAATCAATTGTTTTGCACTCGG.........................................................................................................................................................................................................................................................................................................23100.6060600000000
................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGCC..27120.5870520000000
.........................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCACACAC........28140.5780710000000
..........................TTGCACTCGGATGTGGCTCGTC.............................................................................................................................................................................................................................................................................................22100.5050500000000
............TGGAATCAATTGTTTTG................................................................................................................................................................................................................................................................................................................17120.5060000000510
.........................TTTGCACTCGGATGTGGCTCGTCTGG..........................................................................................................................................................................................................................................................................................26100.5050500000000
..........................TTGCACTCGGATGTGGCTCGTCT............................................................................................................................................................................................................................................................................................23100.5050500000000
.................................................................................................................................................................................................................................................................................................TGGTGAATCAGGATCTGAAAAAAGC...................25130.4660200100210
...........ATGGAATCAATTGTTTTGCACTCGGATG......................................................................................................................................................................................................................................................................................................2890.4440300001000
............TGGAATCAATTGTTTTGCACTCGGAA.......................................................................................................................................................................................................................................................................................................26100.4040220000000
..........................TTGCACTCGGATGTGGCTCGTCTG...........................................................................................................................................................................................................................................................................................24100.4040300001000
..................CAATTGTTTTGCACTCGGATGTGG...................................................................................................................................................................................................................................................................................................24100.4040400000000
............TGGAATCAATTGTTTTGCACTC...........................................................................................................................................................................................................................................................................................................22100.4040220000000
.................TCAATTGTTTTGCACTCGGATGTGGCTC................................................................................................................................................................................................................................................................................................28100.4040400000000
........................TTTTGCACTCGGATGTGGCTCGTC.............................................................................................................................................................................................................................................................................................24100.4040400000000
.....................................................TTGGGTAATTA-------C-----------------TGTTTACTGTT----------------------...................................................................................................................................................................................................................23100.4040000000400
....................................................................................................................................................................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCGCTC..............27130.3850400000100
.........................TTTGCACTCGGATGTGGCTC................................................................................................................................................................................................................................................................................................20110.3641300000000
........................TTTTGCACTCGGATGTGGCTCG...............................................................................................................................................................................................................................................................................................22110.3640200002000
.......................GTTTTGCACTCGGATGTGGC..................................................................................................................................................................................................................................................................................................20110.3640200002000
.........................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTC..............22140.3650500000000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACAA..........27140.3650500000000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCT...............22140.3650410000000
...............................................................................................................................................................................................................................................................................................................CTGAAAAAAGCCGCTCACACACTGTGC...27120.3340400000000
.......................................................................................................................................................................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTC..............24130.3140220000000
.....................................TGTGGCTCGTCTGGTATTGG....................................................................................................................................................................................................................................................................................20130.3140300001000
.........................TTTGCACTCGGATGTGGCTCGTC.............................................................................................................................................................................................................................................................................................23100.3030300000000
................................................TGGTATTGGGTAATTA-------C-----------------TGTTTA..............................................................................................................................................................................................................................................23100.3030100000020
.........ACATGGAATCAATTGTTTTGCACTCGG.........................................................................................................................................................................................................................................................................................................27100.3030100000020
..............GAATCAATTGTTTTGCACTCGGA........................................................................................................................................................................................................................................................................................................23100.3030300000000
...........................TGCACTCGGATGTGGCTCGTCAAA..........................................................................................................................................................................................................................................................................................24100.3030300000000
...........................TGCACTCGGATGTGGCTCGTCTA...........................................................................................................................................................................................................................................................................................23100.3030300000000
......................TGTTTTGCACTCGGATGTGGCTCGT..............................................................................................................................................................................................................................................................................................25100.3030200001000
.................TCAATTGTTTTGCACTCGGATG......................................................................................................................................................................................................................................................................................................22100.3030300000000
..........................TTGCACTCGGATGTGGCTC................................................................................................................................................................................................................................................................................................19110.2731200000000
.....................TTGTTTTGCACTCGGATGTGGCTCA...............................................................................................................................................................................................................................................................................................25110.2730000000300
.....................TTGTTTTGCACTCGGATGTGGT..................................................................................................................................................................................................................................................................................................22110.2730300000000
.........................TTTGCACTCGGATGTGGCTCG...............................................................................................................................................................................................................................................................................................21110.2730120000000
...........................................................AATTA-------C-----------------TGTTTACTGTT----------------------TAC----------......................................................................................................................................................................................................20110.2730000000030
.......................................................................................................................................................................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTCAC............26130.2330300000000
.......................................................................................................................................................................................................................................................................................................ATCAGGATCTGAAAAAAGCCGCTCA.............25130.2330300000000
......................................................................................................................................................................................................................................................................................TGCAGGTTACCTGGTGAATCAGGA...............................2490.2220200000000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGC................21140.2130200000010
.........................................................................................................................................................................................................................................................................................................CAGGATCTGAAAAAAGCCGCTCA.............23140.2130300000000
..........................................................................................................................................................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACACA.........26140.2130100000200
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCG.................20140.2130300000000
..........................................................................................................................................................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACACAC........27140.2130300000000
...........................TGCACTCGGATGTGGCTCGTCAA...........................................................................................................................................................................................................................................................................................23100.2020200000000
..........CATGGAATCAATTGTTTTGCACTCGGA........................................................................................................................................................................................................................................................................................................27100.2020200000000
...................................................TATTGGGTAATTA-------C-----------------TGTTTACTG...........................................................................................................................................................................................................................................23100.2020000000020
...........................TGCACTCGGATGTGGCTCGTCTGGTA........................................................................................................................................................................................................................................................................................26100.2020200000000
............................GCACTCGGATGTGGCTCGTC.............................................................................................................................................................................................................................................................................................20100.2020200000000
................ATCAATTGTTTTGCACTCGGATGTGGC..................................................................................................................................................................................................................................................................................................27100.2020200000000
...........................TGCACTCGGATGTGGCTCGTCA............................................................................................................................................................................................................................................................................................22100.2020200000000
...........................TGCACTCGGATGTGGCTCGTT.............................................................................................................................................................................................................................................................................................21100.2020200000000
...........................TGCACTCGGATGTGGCTCGTCTGT..........................................................................................................................................................................................................................................................................................24100.2020200000000
................................................TGGTATTGGGTAATTA-------C-----------------TGTTTACTG...........................................................................................................................................................................................................................................26100.2020200000000
...........................TGCACTCGGATGTGGCTCGTCTGGA.........................................................................................................................................................................................................................................................................................25100.2020200000000
........................TTTTGCACTCGGATGTGGCTCGT..............................................................................................................................................................................................................................................................................................23100.2020200000000
............................GCACTCGGATGTGGCTCGTCTGGT.........................................................................................................................................................................................................................................................................................24100.2020200000000
.......................GTTTTGCACTCGGATGTGGCTCGTC.............................................................................................................................................................................................................................................................................................25100.2020200000000
...........................TGCACTCGGATGTGGCTC................................................................................................................................................................................................................................................................................................18110.1820200000000
.......................GTTTTGCACTCGGATGTGGCT.................................................................................................................................................................................................................................................................................................21110.1820200000000
........................TTTTGCACTCGGATGTGGCTC................................................................................................................................................................................................................................................................................................21110.1821010000000
............................GCACTCGGATGTGGCTCG...............................................................................................................................................................................................................................................................................................18110.1820200000000
...............AATCAATTGTTTTGCACTCGG.........................................................................................................................................................................................................................................................................................................21110.1820000000020
.....................TTGTTTTGCACTCGGATGTGGCTCC...............................................................................................................................................................................................................................................................................................25110.1820200000000
......................TGTTTTGCACTCGGATGTGA...................................................................................................................................................................................................................................................................................................20110.1820200000000
......................TGTTTTGCACTCGGATGTGAA..................................................................................................................................................................................................................................................................................................21110.1820200000000
...................AATTGTTTTGCACTCGGA........................................................................................................................................................................................................................................................................................................18110.1820200000000
................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACACTGTGCCG.28120.1720200000000
.....................................TGTGGCTCGTCTGGTATTGGG...................................................................................................................................................................................................................................................................................21130.1520100001000
.......................................TGGCTCGTCTGGTATTGGGT..................................................................................................................................................................................................................................................................................20130.1520000110000
....................................................................................................................................................................................................................................................................................................TGAATCAGGATCTGAAAAAAGCCG.................24130.1520200000000
................................TCGGATGTGGCTCGTCTGGTATTGG....................................................................................................................................................................................................................................................................................25130.1520200000000
...............................................................................................................................................................................................................................................................................................CCTGGTGAATCAGGATCTGAAAAAAG....................26130.1520200000000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACACT.........28140.1420110000000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTT..............23140.1420200000000
.............................................................................................................................................................................................................................................................................................TACCTGGTGAATCAGGATCTG...........................21140.1420200000000
..............................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGA.....26140.1420000000200
..........................................................................................................................................................................................................................................................................................................AGGATCTGAAAAAAGCCGCTCACA...........24140.1420200000000
..............................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACA.........22140.1420200000000
.............................................................................................................................................................................................................................................................................................................ATCTGAAAAAAGCCGCTCACACACTG......26140.1420200000000
.............................................................................................................................................................................................................................................................................................................ATCTGAAAAAAGCCGCTCACACAC........24140.1420200000000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCAA............25140.1420200000000
..........................................................................................................................................................................................................................................................................................................AGGATCTGAAAAAAGCCGCTC..............21140.1420200000000
.............................................................................................................................................................................................................................................................................................TACCTGGTGAATCAGGATCTGAAAAA......................26140.1420100000100
................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACA...........18140.1420200000000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCC.............24140.1420200000000
.................................................................................................................................................................................................................................................................................................................GAAAAAAGCCGCTCACACACTG......22140.1420200000000
................................................................................................................................................................................................................................................................................................................TGAAAAAAGCCGCTCACACAC........21140.1420010001000
........................................................................................................................................................................................................................................................................................................TCAGGATCTGAAAAAAGCCGCTCACT...........26140.1420110000000
....................................................................................................................................................................................................TTGTAA-TT---------------CTGTT---------GTGGCATTTTC........................................................................................2480.1310100000000
............TGGAATCAATTGTTTTGCACTCGGATA......................................................................................................................................................................................................................................................................................................2790.1110100000000
..............GAATCAATTGTTTTGCACTCGGATG......................................................................................................................................................................................................................................................................................................2590.1110100000000
.........................TTTGCACTCGGATGTGGCTCGTCTT...........................................................................................................................................................................................................................................................................................25100.1010100000000
......................................................TGGGTAATTA-------C-----------------TGTTTACTGTT----------------------...................................................................................................................................................................................................................22100.1010100000000
................................................TGGTATTGGGTAATTA-------C-----------------TGTTTACT............................................................................................................................................................................................................................................25100.1010100000000
..........................TTGCACTCGGATGTGGCTCGTTA............................................................................................................................................................................................................................................................................................23100.1010100000000
.....................................................TTGGGTAATTA-------C-----------------TGTTTACTG...........................................................................................................................................................................................................................................21100.1010000000010
..........................................................TAATTA-------C-----------------TGTTTACTGTT----------------------TAC----------......................................................................................................................................................................................................21100.1010000000010
.................TCAATTGTTTTGCACTCGGATGTG....................................................................................................................................................................................................................................................................................................24100.1010100000000
..........CATGGAATCAATTGTTTTGCACTC...........................................................................................................................................................................................................................................................................................................24100.1010100000000
................................................TGGTATTGGGTAATTA-------C-----------------TGTTTACTA...........................................................................................................................................................................................................................................26100.1010100000000
................................................................................................................................................................................................................................T---------GTGGCATTTTCTTTTGTGG-------CTTTTG...................................................................26100.1010000000010
.........................TTTGCACTCGGATGTGGCTCGTCTGGT.........................................................................................................................................................................................................................................................................................27100.1010100000000
..................CAATTGTTTTGCACTCGGATGT.....................................................................................................................................................................................................................................................................................................22100.1010100000000
...................AATTGTTTTGCACTCGGATGTGGC..................................................................................................................................................................................................................................................................................................24100.1010000000100
...................AATTGTTTTGCACTCGGATG......................................................................................................................................................................................................................................................................................................20100.1010000001000
...............AATCAATTGTTTTGCACTCGGATG......................................................................................................................................................................................................................................................................................................24100.1010100000000
..........CATGGAATCAATTGTTTTGCACC............................................................................................................................................................................................................................................................................................................23100.1010010000000
...................................................TATTGGGTAATTA-------C-----------------TGTTTACTGTT----------------------...................................................................................................................................................................................................................25100.1010100000000
...........................TGCACTCGGATGTGGCTCGTCTT...........................................................................................................................................................................................................................................................................................23100.1010100000000
.........................TTTGCACTCGGATGTGGCTCGTCT............................................................................................................................................................................................................................................................................................24100.1010100000000
.................TCAATTGTTTTGCACTCGGATGTGGCTT................................................................................................................................................................................................................................................................................................28100.1010100000000
.............................CACTCGGATGTGGCTCGTCTG...........................................................................................................................................................................................................................................................................................21100.1010100000000
................ATCAATTGTTTTGCACTCGGATGTGG...................................................................................................................................................................................................................................................................................................26100.1010100000000
.....................................................TTGGGTAATTA-------C-----------------TGTTTACTGT..........................................................................................................................................................................................................................................22100.1010100000000
....................ATTGTTTTGCACTCGGATGTG....................................................................................................................................................................................................................................................................................................21100.1010100000000
.....................TTGTTTTGCACTCGGATGTGGCTCGTCT............................................................................................................................................................................................................................................................................................28100.1010100000000
.........................TTTGCACTCGGATGTGGCTCGTCTGT..........................................................................................................................................................................................................................................................................................26100.1010100000000
..........................TTGCACTCGGATGTGGCTCGTCTGT..........................................................................................................................................................................................................................................................................................25100.1010100000000
...................AATTGTTTTGCACTCGGATGT.....................................................................................................................................................................................................................................................................................................21100.1010000001000
.................TCAATTGTTTTGCACTCGGATGT.....................................................................................................................................................................................................................................................................................................23100.1010100000000
...........ATGGAATCAATTGTTTTGCACTCGGAT.......................................................................................................................................................................................................................................................................................................27100.1010100000000
..................CAATTGTTTTGCACTCGGATGTGGCT.................................................................................................................................................................................................................................................................................................26100.1010100000000
.................TCAATTGTTTTGCACTCGGATGTGAAA.................................................................................................................................................................................................................................................................................................27100.1010100000000
............TGGAATCAATTGTTTTGCACTCGGAC.......................................................................................................................................................................................................................................................................................................26100.1010010000000
............TGGAATCAATTGTTTTGCAC.............................................................................................................................................................................................................................................................................................................20100.1010001000000
..................................................GTATTGGGTAATTA-------C-----------------TGTTTA..............................................................................................................................................................................................................................................21100.1010000000100
............................GCACTCGGATGTGGCTCGTCTGGTA........................................................................................................................................................................................................................................................................................25100.1010100000000
A-------GACATGGAATCAATTGTTTTGCACT............................................................................................................................................................................................................................................................................................................26100.1010100000000
..............................ACTCGGATGTGGCTCGTCTGGT.........................................................................................................................................................................................................................................................................................22100.1010100000000
..............................................TCTGGTATTGGGTAATTA-------C-----------------TGTTT...............................................................................................................................................................................................................................................24100.1010100000000
.........................TTTGCACTCGGATGTGGCTCGTCTAAA.........................................................................................................................................................................................................................................................................................27100.1010100000000
.............................CACTCGGATGTGGCTCGTCTGG..........................................................................................................................................................................................................................................................................................22100.1010100000000
...........................TGCACTCGGATGTGGCTCGTCTGA..........................................................................................................................................................................................................................................................................................24100.1010100000000
.........ACATGGAATCAATTGTTTTGCACTCGGA........................................................................................................................................................................................................................................................................................................28100.1010100000000
.......................................TGGCTCGTCTGGTATTGGGTAATTA-------C-----------------....................................................................................................................................................................................................................................................26100.1010100000000
..................CAATTGTTTTGCACTCGGAT.......................................................................................................................................................................................................................................................................................................20110.0910001000000
.............................................................................................TACTGTT----------------------TAC----------TGTT---------------TACA-------------TC................................................................................................................................................................20110.0910000000010
.....................TTGTTTTGCACTCGGATGTGGCTA................................................................................................................................................................................................................................................................................................24110.0910010000000
..............................................................................................ACTGTT----------------------TAC----------TGTT---------------TACA-------------TCCG..............................................................................................................................................................21110.0910000000010
.....................TTGTTTTGCACTCGGATGTGGCTCGC..............................................................................................................................................................................................................................................................................................26110.0910100000000
..............................................TCTGGTATTGGGTAATTA-------C-----------------AAA.................................................................................................................................................................................................................................................22110.0910100000000
........................TTTTGCACTCGGATGTGGCT.................................................................................................................................................................................................................................................................................................20110.0910100000000
..........................TTGCACTCGGATGTGGCTCGG..............................................................................................................................................................................................................................................................................................21110.0910100000000
.........................TTTGCACTCGGATGTGGCT.................................................................................................................................................................................................................................................................................................19110.0910100000000
.....................TTGTTTTGCACTCGGATGTGGAA.................................................................................................................................................................................................................................................................................................23110.0910100000000
.....................TTGTTTTGCACTCGGATGTGGA..................................................................................................................................................................................................................................................................................................22110.0910100000000
...........................TGCACTCGGATGTGGCTCGCAA............................................................................................................................................................................................................................................................................................22110.0910100000000
.....................TTGTTTTGCACTCGGATGTGA...................................................................................................................................................................................................................................................................................................21110.0910100000000
.....................TTGTTTTGCACTCGGATGTGGCTCCC..............................................................................................................................................................................................................................................................................................26110.0910100000000
...........................TGCACTCGGATGTGGCTCGC..............................................................................................................................................................................................................................................................................................20110.0910000100000
........................TTTTGCACTCGGATGTGG...................................................................................................................................................................................................................................................................................................18110.0910100000000
......................TGTTTTGCACTCGGATGTGGCTTT...............................................................................................................................................................................................................................................................................................24110.0910100000000
...............AATCAATTGTTTTGCACTCG..........................................................................................................................................................................................................................................................................................................20110.0910010000000
................ATCAATTGTTTTGCACTCGG.........................................................................................................................................................................................................................................................................................................20110.0910000000010
........................TTTTGCACTCGGATGTGGCTCCC..............................................................................................................................................................................................................................................................................................23110.0911000000000
........................TTTTGCACTCGGATGTGGC..................................................................................................................................................................................................................................................................................................19110.0910000100000
droPer2
A-------GACATGGAATCAATTGTTTTGCACTCGGATGTGGCTCGTCTGGTATTGGGTAATTA-------C-----------------TGTTTACTGT---------------------------------------T---------------TACA-------------TCCGTAA---------A----C-ACTTGTAA-TT---------------CTGTT---------GTGGCATTTTCTTTTGTGG-------CTTGGCTCCCCGCTCCCTTGCAGGTTACCTGGTGAATCAGGATCTGAAAAAAGCCGCTCACACACTGTGCCGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................................................................................................................................................................................................................................TCTGAAAAAAGCCGCTCACACACTGTG....2711.001100000
.......................GTTTTGCACTCGGATGTGGCTC................................................................................................................................................................................................................................................................................................2211.001100000
droWil2
A-------AACATGGAATCAATTGTTTTACATGCAGATGTAGCACGTCTGGTTCTTGGTAAGTA-------ATGCCC--TTCCGTTCTTTAGGA--AATCGACATGCTGCA--------------TATGGCGTCTCC-----------------TACA-------------CCAGA--------------AA-A-------T-GA---------------AAATT---------CTTTGG-----------AATTTT------------------ATTTGCAGGCTATTTGGTTAAACAAAACCTGCGACGAGCGGCTTACAGTTTATGCCGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................AAACAAAACCTGCGACGAGCGGCT...............2411.00101000
droVir3
A-------AAAATGGAATCAATTGTGCTGCATTCTGACATCGCGCGTCTAATTTTGGGTGAGTC-------T-----------------GGT------------------------AGT--------------CCCATGT----------CGTT-----------------CG-----GTG---------CC-T-------T-TA---------------ATGCC---------TTTCAAT-GT----C-----TGC------------------ATTTGCAGGATATTTCATAAATAACAATCTAAAACGGGCGGCGTTAACACTGTGCCGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................AACAATCTAAAACGGGCGGC................2011.001000000000000000000100000000000000000000000000000000000000000000
droMoj3
A-----------TGGAATCAATTGTGTTGCATTCGGATATCGCGCGTCTCGTTTTGGGTGGGTT-------TTCAAC--TCTTGCA-----------------------------------------------TT---GTAAAATCA---T----------------------------ATGC------CTT-A-------T-TA---------------ACAGT---TA-TT-GCCGT------------------------------------ATTTTCAGGCTACTTTGTAAATAACAATTTGAGACGTGCGGCACTTTCATTGTGTCGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
A-------GA-ATGAAATCCATTGTACTGCATTCGGACATAGCGCGTCTAATTTTAGGTAAGTA-------GTCTG---------------G------------------------GTCTCTTGC----AGACGCTGGTC----------TGA-----TC-------------------GATC------GAC-A-------T-TTC--------------ATAA--ATTGCGCTTGACAAT-TT----C----------------------GGCATCTATTAGGCTATTTATTAAATAATGATCTGAGGCATGCGGCGCTAACGTTTTGTCGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
A-------GTCATGGAGTCCATAGTGCTGCACTCTGATGTTGCGCGTCTGGTTTTGGGTGAGTC-------C-----------------TGT------------------------ACC----------------------------------------------------TCCAGTT---------A----T-TCCTGAAT-TTCTTACTGAGCTACTTACGTT-----------------------TGGGA-------C-------------TCATTCCAGGGTACTTGGTGAATCAGAACCTGACGCGAGCCGCTAACACACTGTGCCGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................GTTGCGCGTCTGGTTTTGG....................................................................................................................................................................................................................................................................................1911.001000001
droBip1
A-------GTCATGGAGTCCATAGTGCTGCACTCTGATGTTGCACGTCTAGTTTTGGGTGAGTC-------C-----------------TGT------------------------ACC----------------------------------------------------TCTAGTT---------G----G-TCTTGAAGCTGTTTACTTAGCTCCTT----------------------GT----TGGCA-------T-------------TCATTTCAGGCTACTTGGTGAATCAGAATCTGACGCGAGCCGCTAACACACTGTGCCGCSizeHit CountTotal NormTotal
No Reads
droKik1
A-----------TGGACTCGATCGTTCTGCACTCGGATGTGGCCCGGCTTGTTCTGGGTGAGTC-------TACTCC--G-----------------------------------------------------------------------------------------------------------------------------------------------CG---------GCGACGTTCTTTCTTCTTG-------CTAATGCCTTTGCCCGCTCGCAGGCTACTTGGTTAACCAGAATCTGCGGCGAGCGGCCCATACCCTGTGTCGCSizeHit CountTotal NormTotal
No Reads
droFic1
T-------GCCATGGAGTCAATTGTCCTTCATTCCGATGTAGCTCGTTTGGTTCTAGGTAAGTTGTTGGTTTTCCCT--GC------------------------------------------------------CCTGC----------C------------------------------GC------TAT-A-------T-TC---------------ATGATTATTTTTCTCGCCA-------------ATTATATT-----------G-----GTATAGGCTACTTGGTTAACCAGAATCTGGAAAAGGCCGCACACACTTTGTGTCGCSizeHit CountTotal NormTotal
No Reads
droEle1
A-------GCCATGGAATCGATTGTGCTGCATTCGGATGTGGCGCGCTTGGTCCTAGGTGAGTT-------T-----------------CGTTTGCTGC--------------------TCCTGC-------------------------TGT-TGGA-------------TCCGTGA---------A--T-CA-------T-CC---------------ATGAT---------CCATCA----------------TATG-----------C---ATATGTAGGCTATCTGGTCAACCAGAATCTGAAGCGGGCGGCCCACACGCTGTGCCGCSizeHit CountTotal NormTotal
No Reads
droRho1
A-------GCCATGGAGTCAATTGTGCTGCATTCGGATGTAGCGCGCTTGGTCCTGGGTAAGTT-------T-CCCT--AGAGA-T-----------------------------------------------TCCCTAC----------CGG-----CTGATTTACGAGC-----AA---------A----G-----------------------------GC-----------TTGCAC-----------------------------------TTTATAGGCTACCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACTCTGTGTCGCSizeHit CountTotal NormTotal
No Reads
droBia1
A-------GTCATGGAGTCGATTGTCCTGCACTCGGATGTGGCGCGCCTGGTTCTGGGTGAGTT-------C-----------------CATTT--CGTTTTG---TTTCGCTTGGGATTC----CAATGGACTCCCTGG----------CTG-----C-------CGAGC-------AGCATGAAATTCTT-G-------T-TT---------------GTGCT---------GGC-------------------------------------TCTTTCCAGGCTATCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACCCTGTGTCGCSizeHit CountTotal NormTotal
No Reads
droTak1
A-------GCCATGGAGTCGATAGTCCTGCACTCGGATGTGGCGCGCCTGGTCCTGGGTGAGTT-------GCCCCCTTGGAGGTT---------------------------------CC----CATTGGAAT---------TCCATATTCCC-----------------CC-----AGC---------AT-A-------T-TC---------------ATGAT---------TTTTGG------------TTTAT------------------ATTTTCAGGCTACCTGGTCAACCAGAATCTCAAGAGGGCCGCCCACACCCTGTGCCGCSizeHit CountTotal NormTotal
No Reads
droEug1
A-------GCCATGGAGTCGATTGTCTTACACTCGGATGTGGCACGCTTGGTCCTGGGTGAGTT-------T-----------------TATTG--TGTTTAAAATTTTCG--------------CAAAGGATTCTCTGC----------A----------------------------GCAC------GAT-A-------T-TC---------------ATGTT---------GCCTGG------------T-------T-------------GCAATTTAGGCTATCTGGTCAACCAGAATCTGAAGAGGGCGGCCCACACTCTGTGTCGGSizeHit CountTotal NormTotal
No Reads
dm3
A-------GCCATGGAGTCGATTGTCCTGCATTCGGACGTGGCTCGCTTGGTCCTGGGTAGGTT-------TTCCCT--GGACGCT-----------------------------------------------TTTCTAG----------C----------------------------TCGC------AAT-A-------T-TT---------------ATGCT---------CTTCCAT-----------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........CCATGGAGTCGATTGTCCTG................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................ACCTAGTCAACCAGAATCTAAAAAGGGC...................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTGTCCTGCATTCGGACGTGGCTC................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
A-------GCCATGGAGTCGATTGTC...................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TCGGACGTGGCTCGCTTGGTCCTGG....................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATTGTCCTGCATTCGGA........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CGTGGCTCGCTTGGTCCTGGGCT.................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TCGATTGTCCTGCATTCGGACGTGGC..................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ACCAGAATCTAAAAAGGG....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ACGTGGCTCGCTTGGTCCTG.....................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CCAGAATCTAAAAAGGGCCGC................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
A-------GCCATGGAGTCGATTGT....................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TTGTCCTGCATTCGGACGTGG...................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGCATTCGGACGTGGCTCG...............................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
A-------GCCATGGAGTCGATTGTCCTGC...............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AGGGCCGCACACACTCTG......1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TT---------------ATGCT---------CTTCCAT-----------------------------------TTTGTAG..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................CCAGAATCTAAAAAGGGCC..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATTGTCCTGCATTCGGACGTGGCT.................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCCATGGAGTCGATTGTCCTG................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CTGCATTCGGACGTGGCTCGCT.............................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.....................TTGTCCTGCATTCGGACGTGGCTCGCT.............................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................ATTCGGACGTGGCTCGCTTGGTCCTG.....................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GATTGTCCTGCATTCGGACGT.....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GCCATGGAGTCGATTGTCCT.................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TGCATTCGGACGTGGCTCGC..............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................GTCCTGCATTCGGACGTGGCTC................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............TGGAGTCGATTGTCCTGCATTCGGA........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ACCAGAATCTAAAAAGGGC...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
droSim2
A-------GCCATGGAGTCGATTGTCCTGCATTCGGACGTGGCTCGCTTGGTCCTGGGTAGGTT-------TTCCCT--GGACGCT-----------------------------------------------TTCCTAG----------C----------------------------TCGC------GAT-A-------T-TT---------------ATGCT---------GTTCCAT-----------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................ACCAGAATCTAAAAAGGGCCG.................2111.00110000000000000000
droSec2
A-------GCTATGGAGTCGATTGTCCTGCATTCGGACTTGGCTCGCTTGGTCCTGGGTAGGTT-------TTCCCT--GGACGTT-----------------------------------------------TTCCTAA----------C----------------------------TTGC------GAT-A-------T-TT---------------ATGCT---------GTTCCAT-----------------------------------TTTGTAGGCTACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AAAGTCCAGCCATGGAGTCGATTGTCCTGCATTCGGATGTGGCTCGCTTGGTCCTGGGTCAGTT-------TTCCCT--GCATGAT-----------------------------------------------TTCCTGA----------C----------------------------GCTC------TAT-A-------C-TC---------------ATGCT---------GTTTCA------------------------------------TTTGTAGGATACCTAGTCAACCAGAATCTAAAAAGGGCCGCACACACTCTGTGTCGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
A-------GCCATGGAGTCGATTGTCCTGCATTCGGATGTGGCTCGCTTGGTCCTGGGTAAGTT-------TTCCCT--GGATGCT-----------------------------------------------TTCCTGA----------C----------------------------GAGC------GAT-A-------T-TT---------------ATGCT---------GTTTCA------------------------------------TTTTTAGGCTATCTAGTCAACCAGAATCTAATACGGGCCGCACACACTCTGTGTCGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................GATTGTCCTGCATTCGGATGTGGCT.................................................................................................................................................................................................................................................................................................2511.0010000100

Generated: 05/18/2015 at 05:06 AM