ID:

dps_2614

 Coordinate:

XL_group1e:1113434-1113584 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dpse_GLEANR_603:1]; CDS [Dpse\GA27402-cds]; intron [Dpse\GA27402-in]

Repeatable elements

NameClassFamilyStrand
(CTG)nSimple_repeatSimple_repeat+
CT-richLow_complexityLow_complexity+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAGCATTGACGTCGATGTCTACGTCAGCTGTTGGCTTCTGCCGCCTAGATGTAAGTAAAAGCGAGACAGACAGAGGATAGAGAGAGAAGAGAGAGTGGGAGTAAGAAGGAGAGGCAGGATTAAACGGGATAATATACGTAGCAGAAGCAGAAGCATCAGCGGCAACGGCAGCGGCAGCGGCAGAAGCAAGCAAAGAAGAAGGAGCCAGCAACAGCAGACGCATCCATCAAAACAAACCAAAAAAAAAAAAC
**************************************************.........................................................................................................((.((.((....((.((....)).))....))..))......))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M062
head
 GSM343916
embryo
 M059
embryo
 V112
male body
.......................................................................AGAGGATAGTGAGGGAAGA................................................................................................................................................................. 19 2 3 0.67 2 2 0 0 0 0
......................................................................................................................................................................................................AAGTAGCCAGCAACAGCA................................... 18 1 3 0.33 1 0 1 0 0 0
................................................................................................................................ATAATAGACGTAGAAGAAGAAG..................................................................................................... 22 3 4 0.25 1 1 0 0 0 0
....................................................................................................GTAGGAAGGAGAGGCAGTATG.................................................................................................................................. 21 3 4 0.25 1 0 0 1 0 0
.........................................................................................................................................................................................................GACACAGCAACAGCAGACGCA............................. 21 2 13 0.08 1 0 0 1 0 0
..............................................................................................................................................................................................................................TTCATCAGAACAAAGCAAAAA........ 21 3 20 0.05 1 0 0 0 1 0
....................................................................................................................................................................ACGGCAGCGGCAGCGGAA..................................................................... 18 1 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

GTCGTAACTGCAGCTACAGATGCAGTCGACAACCGAAGACGGCGGATCTACATTCATTTTCGCTCTGTCTGTCTCCTATCTCTCTCTTCTCTCTCACCCTCATTCTTCCTCTCCGTCCTAATTTGCCCTATTATATGCATCGTCTTCGTCTTCGTAGTCGCCGTTGCCGTCGCCGTCGCCGTCTTCGTTCGTTTCTTCTTCCTCGGTCGTTGTCGTCTGCGTAGGTAGTTTTGTTTGGTTTTTTTTTTTTG
**************************************************.........................................................................................................((.((.((....((.((....)).))....))..))......))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM343916
embryo
........................................................................................................................................................................................TCGTTCCTTTGTTCTTCCC................................................ 19 3 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1e:1113384-1113634 - dps_2614 CAGCATTGA--------CGTCGA----------------------T-------G--------------TCTACGTCAG---CTGTTGGCTTC---------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCCTAGATGTAAGTAAAAGCGA---------------------------------GACAGACAGAGGATAGAGAGAGAAGAGAGAGTGG------------------------------------------------------------------------GAGTAAGAAGGA--------GAGGCAGGATTAAACGG--------GATAATATACGT---------------A---GCAGAAGCA----------GAA------------------GCA------------------------------------------------------------------------------------------------TCAGCGGCAAC-----------------------GG------------------------------------------------------------------------------------CAGCGGCAG---CGGCAGAAGCAAGCAAAGAA-------------GAAGGAGCCAGCAACA---------------------------------------------G---CAGA----C----------GC----------------------------------------------------------------------ATCCATCAAAAC---------------AA--ACCAAAA-AAAAA----AAAC
droPer2 scaffold_30:82298-82540 + CAGCATTGA--------CGTCGA----------------------T-------G--------------TCTACGTCAG---CTGTTGGCTTC---------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCCTAGATGTAAGTAAAAGCGA---------------------------------GACAGACAGAGGATAGAGAGAGAAGAGAGAGTGG------------------------------------------------------------------------GAGTAAGAAGGA--------GAGGCAGGATTAAACGG--------GATAATATACGT---------------A---GCAGAAGCA----------TCA------------------GCG------------------------------------------------------------------------------------------------TCAGCGGCAAC-----------------------GG------------------------------------------------------------------------------------CAGC---------GGCAGAAGCAAGCAAAGAA-------------GAAGGAGCCAGCAACA---------------------------------------------G---CAGA----C----------GC----------------------------------------------------------------------ATCCATCAAAAC---------------CA--ACCAA---AAAAA----AAAC
droWil2 scf2_1100000004577:3555968-3556192 + CCATACTTT--------TTGTTA----------------------C-------T--T----------GTTTTGGT----------------TTGCCATTTAACCGAGAGCATACA-------------------------------------GAGTGGAAATACTGA----GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------AGA---------------AAGAACGAGA------------------------------------------------------------------------GAGTAAGAGAGA--------GAGAAAGGTGC----------------------------------------------------------------------------------------------------------------AAAAAAACGGATATTGGC----------------------------------TAGAAGCATCTTATGAA---ACAATTGAAGC---AACG--TGCTTC------TG---AGCAGG---------------------------------------------------------------------CAAAGGAGCAACATCCG------AAG-----------------------------------------------CATTAT---AAAA----------------------------------------ATCAACC----AC---------------------------------------------------------------------------------C----------------A----TCAAC-AACAA----CAAC
droVir3 scaffold_13049:3383407-3383645 - CAGCAGCGA--------CGCCGG----------------------C-------G--------------ACGCTGTC-G---C----------------------------------------------TGCGACCGAAA----A-----------------------------------AAAAAACGACGTAAGAAAAAGAGCAGCATTAAGAAGAAGCCATGCGAAGAAGAAGAGCGAACGCATGAATATTTT----------------------------------------------------------------------------------------------TTTTTAGCTTAA-----------TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCGTAAGCTAA-----AGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA--CAAAGAC------AAC-----AG------------------------------------------------------------------------------------CAGCAACAA---CAATA-AAGCAAAAGAAGAA-------------GAAGAAG----------------CAGCTA---C---ACGGAAGTCGCCAGCAACA------A---AAA-------------------------------------------------------------------------------------------------------------------CA--AGCA----AACAA----CGGT
droMoj3 scaffold_6680:8196256-8196497 + CAACGACGA--------CGGCGA----------------------C-------G--------------GCAACGTTTG---C----------------------------------------------TGAG-------------------------------CCAGAGCC------------AG-----AG--------------------------------------------------------------------------CCAGA-GCCAGTGCTTTGAAAGCGGACAGCAAAAAGGATTG--AACGAAGAGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAGCGAGAGGC----------------------------------------AGTGAGAGT---------GAGGCAGAGGC---------------G---GG-------------------T------------------GCA---------------------------------------------------------------------------------------------GTCA---AAACAGC--AGG--------------------------------------------------------------------------------------------------AGG------------------CAA--------------------------------------------------TGGCGA---------------------------------------CGCACGTGAAGAC---GCAGCAAAGTATACGCACAAGCACACGCACACACACACACATACACA-----------CA---------------------------------------CA--CGCAAAC-GAATG----AAAC
droGri2 scaffold_98:802-1057 - CAGCAGCAG--------CGGCAG----------------------C-------A--------------GCAGCAGCAG---CAG----------------------------------------------CG-------------------------------GCAG----------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCGGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAG--------------------------------------CAGCAGCAGCAGCAGCAGCA---CCAACAGCAGC---AG--------------------CAGCAGCAGCGTCAACATCATCAGCAGCAGCAGCAGGAGCAGTTAAAACAGCAGCAACATCAGCAGCAGCAAAAACAGCAGCAGCAACAGCAG------------C-----------------------------------------AGCAGC---------------A---------------GCAGCAT---CAGC----A----------GCA------------------------------------------G-------------------------------------C---------------AG--CTAAAAC-AACAA----CAAC
droAna3 scaffold_13340:5075626-5075876 + CAGCAACAA--------CCACTC-----------TA---------C-------GACCAGGAAC-------A-GGC---------TTGGC------------------------------------------TCTAGAAAAGAA--------------------TAAACAGG------------AT-----CA--------------------------------------------------------------------------ACAACACGCACAA---------------------------------------CATGTAAGTGGAAAGTTAAATGGAAACTACATATGCGGGTCC-----------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAAA---A-------------------------------------------------------------------------GTATGCTACGGAAAGCAGCAGCAGCA----------GAA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAGC--------------------------------------------------------------------------------------------------------------AGCATCAGCATCGGTAGTGGCAACCAACAAC-------------CAAACAAC------------------------------------------------------------------CCAACA----AC------------------------------------------------GAGGCAAC--AT-------------CAACAAAAC----------------A--GCTA-CA-ATAAA----CAAC
droBip1 scf7180000396022:4522-4786 - CAGCAGTGC--------CAGCAA----------------------C-------A--------------ACAACA---------AATAGCAAA---------------------AACTGCAT-------AGCGTTCGGCA---A-----AGCGCAGCAACAACAACAA----CAACAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAAGAAAGCACAAGAAACACAAACAACAACAACAA-----------CAACAATCGCACAAA---A----------------------CGTTGCAATCG-AA-GCCA------AAGTCGCAGCAGCAAC-----AGT---------------A---GCAACAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------TCAGCAGCAAC-----------------------AGCAGCAG------------------------------------------------------------------------------CGGCGGCAG-------------------------------------CAGAAG----------------CGGTAG---C---ATCGACGGCGGCAGCA---------A---CAAC----A----------A----------------------------------------------------------------------------------C----------------A----ACAAC-AATAA----TAAC
droKik1 scf7180000302610:350722-350937 - CACG-ACAG--------CAACAA----------------------C-------G-GC---G-------ACAG-----------------------------------------------------------------------------------CGACAAGAGCAA----CTGCAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------AGGAGGAGCAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGAAGAAGGAGGAGGAGGAGCAGGAGTGGGAA--------------------------------------GAGCAGAAGGAGCAGGAGTA---GCAGGAGGAGC---AA--------------------GAGCAGG---------------------------------------------------------------------AGTAGCAGCAGGAGCTG------GAGGAGCAA-----------------------------------------GAGTAG---CAGGAGC---A---------------GCAGCAA---CAGC----A----------AC----------------------------------------------------------------------ATGCAGCAAACT---------------CA--ACGGGAG-CCGAA----AGCT
droFic1 scf7180000453778:363105-363351 + TTGCACTGC--------TC--GA----------------------T-------GTCC-------------------------TGCTGGC------------------------------------------GACTGAGC----G-----------------------------------GAAAAGTGGTGAA------------------------------------------------------------------AGGCAGGAGAAAA-GCGACAGCTTCTCGTGCGGGCAAGCATAAAAATAA--CACGATGCCAAA---------------------------------------------------G-TGCCGACGAC---AAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGC-----AGC---------------A---GCAGCAGC-------------AGAA---------------GAG------------------------------------------------------------------------------------------------GAAGAAGCAGC-----------------------------------------------------------------------------------------------------AGCAGCAGCAGAAGAAG-------------------------------------AAGAAG-CAG---------TAGCAG---C---------AGAA------------------G---TAGA----A----------GC----------------------------------------------------------------------GACAATGAGAAC------GAGAAAGGCCGAAGCGCAGC-GA--AATCAAAAC
droEle1 scf7180000490970:483883-484156 - CAGAAATCGTTGGGCGCCCAAG---------------------TGC-------A--------------ACTGCATCAAAATCCGTTGGCAGC---------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCCCCAACAGCTAGT-----------------------------TCATCAGAAAACGACGGTCGGAGCACAGA-------------------------------TTCAGCAACAACAAAAAGTATTTGT---------------------------------GGGACAACAGCA--------GCAGAAGATTTCCCAGG--------CACAACTTCAGC---------------A---GCAGCAGCA----------GCA------------------ACA------------------------------------------------------------------------------------------------GCAGCAGCAAC-----------------------AG---C------------------------------------------------------------------------AGCAGCAGCAACAGCAA------------C-----------------------------------------AGCAGCAG---CAACA---------------------------G---CAGC----A----------GC----------------------------------------------------------AACAGCAAAGAGCCTCTCTAGGGC---------------AA--GTTCAAC-AGCAA----CAGC
droRho1 scf7180000777097:448504-448732 - ACG--ATGA--------CGTTGA----------------------T-------G--------------ACGACGTTGC---CGAGTTGCATT---------------------------------------------------------------------------------------TTCAAGAGCCACAACACAATGCCAAGTGCCAACAACAAGATGAGCGAAGGGGGAAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTGCCAAAGGC----------------------------------------AACCGCAGC---------AACACACTCGC---------------A---GC-------------------A------------------GTA------------------------------------------------------------------------------------------------G---CAGCAAC--------------------------AGCAGA---------------------------------------------------------------------AGTAGCAGCAACAGCGG------CAA-----------------------------------------------CAGCAG---------------------------------------CAACACACAAGCAGCA---GC----------------------------------------------------------AACAGTGAAAATATTTTTC---GC---------------TA--GCCAAGC-AG--A----ATCA
droBia1 scf7180000302428:6867887-6868118 + CAGCAAATG--------TTGAGA----------TTACACTAAAAGTAACTGCC-AACGGCAGCAGCG-----------------------------------------------------TCGTCGGCAGCG-------------------------------GCAGCAGC------------AG-----CA--------------------------------------------------------------------------GCAGAATGCAACGCATTTGCCGAGTGCAGCACTAAAA-TCAATTATGTAGCCAGC---------------------------------------------------G-CAGCAGCAAC---ATCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------GTA------------------------------------------------------------------------------------------------GCAGCAGCAGC-----------------------AG---C------------------------------------------------------------------------AGCAGCAGCAACAGCAG------------C-----------------------------------------AACGTCAG---CGACT---------------------------G---CAGC----A----------GCA------------------------------------------GCAGCGTGAAAATAG---------------------------------------TA--GTGA-AA-AAAAG----AGAA
droTak1 scf7180000416006:276456-276692 - CAACATCGG--------CAGCAAATGTTGAGA-TTACACTAAAAGTAACTGCC-AACGGGAGCAGCG-----------------------------------------------------ACGTCGGCAGAA-------------------------------GCAGCAGC------------AG-----CA--------------------------------------------------------------------------GCAGAATGCAACGCATTTGGAGAGTGCAGCTCTAAAA-TCAATTATGTAGCCAGC---------------------------------------------------G-CAGCAGCAAC---ATCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------GTA------------------------------------------------------------------------------------------------G---CAGCAAC-----------------------AG------------------------------------------------------------------------------------CAGCAGCAG------------CAA-----------------------------------------CATCAG---CGACTGC---A---------------GCAGCAG---CAGC----A----------GC------------------------------------------------GTGAAAATAG---------------T-----AGT---------------GA--AACAAAG-AGAAA----TAGC
droEug1 scf7180000409463:730535-730768 - CAGCAACAC--------CTTAG---------------------AGC-------A--------------ACAACAACAA---CAGTGGCATTT---------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGCGAAG-------------------------------------GCGGTGAAAGACGTT------------------------------------------------------------------------------GGGTGCGTCAGGCAGTCATGGGGGT----ATTGA-G---------ATGGCGCGATTTACCCG--------GATCGCGTATATC-GGGTTCTA----------------------------TCG------------------GCG------------------------------------------------------------------------------------------------GCAGCAGTAACAGCAGCGGC------AGCAAC--AC---C------------------------------------------------------------------------AACAA---------------CAATC--------------------------------ATACCCACAGCAGCAGCAACAACAA---------------------------------------TTC---------------------------------------------------------------------------------------GCATCAGCAC---------------CA--GCAGCAG-CAACA----CAAC
dm3 chr3R:9316629-9316849 + CATACTTAA--------CAAATA---TTACGAAATACTACAGAGAAAAGTGCA-CGCAACAAAAGAA-----------------------------------------------------TAACAGGGGCTG-------------------------------GCCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------AATCGCAGACGGGC-GACA------TGGTTGCGGGTTAAAGAGATGCAA---------------AGCAGCAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATCAGCAGTTGC-----------------------------------------AGCAACAG------------------CAACAGCA---------G---CAGC----A----------AC----------------------------------------------------------------------AGCCGCCTAGGT---------------GA--GCTAGAC-AAAAA----GCGC
droSim2 x:11899313-11899585 + CAACATCAA--------TATCAG----------------------C-------A--------------TCCGCATCCG---T-AT---------------------------------------------CC-------------------------------GCAT----------CC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCCGTATCCGC---AT----CAAACATCCGTTATACAGCAACAGCAGTCAGTGACATC------------------------------------------------------------------------------GTACGAAT---------------------CCCTAAAA--------AAGTC-CAAATCACAAG--------GTGGGAGCACAACAGAGCACTACAGTAAACAACAGCTAACAGCAACCACTACA------------------ACA------------------------------------------------------------------------------------------------A---CTACAAC--------------------------------------------------------------------------------------------------------------------------AACAATAGCAACCAATTATAACAGCAAGCAATACAAGCAACAACAACA---------------------------------------------G---CAAA----A----------AC--------------------------------AACAACCTAA-AC-----------AG---------------------------------------CA--ACCAA----CCAA----ATAA
droSec2 scaffold_15:1503797-1504023 + CTGCAACCA--------CCC-AA--------------------TGTGACAGTT-AGCA----------GCAGCAGCAC---CAG-----------------------------------------------------------------------TGGCAACAACAA----CAACGGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------AGGGGGAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTGCTCAATAC------------------CTACAATTGGCAGTGAGCTTTTCAAAGCCAACCTTGTGGCAGCAGCAGCAGCA---------GTCG---TCGCAGC---------------------TGAG---CAGC---------------------------------------------------------------------AGAGG------------------CAG--------------------------------------------------CAGCTA---------------------------------------CACAAGTCAGCAAGCAGCA------------------------------------------GC-------------AGCAGC-------------CAACCGTCAACGA-------AT--TCTGGCC----------AAAA
droYak3 X:17914866-17915107 + CTTCTGGCC------T-CGCCA-----------------------C-------C--C----------GTCTCTTT----------------CGCTCACTGCGC---------------------------------------------------------------------------------------------------------TATGT----------------------------GGCTAATTACTTTCGAAAGTCAAG-----------------------------------------------------------------------------------TTATTAGCGTGATTACAAAGGCATTGCACATGAGCCAGGACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGC-----AGC---------------A---GCAAAAGC-------------AGCAAAAGGAGCAACAGCAAC-AGCA--------------------------------------------------------------------------------------------GCAAAAGGAG--------------------------------------------------------------------------------------------------------------CAACAGCAA------------CAG-----------------------------------------CAGCAG---CAGCAAC---A---------------GCAGCAGCAGCAACACGCAACAACGAGGAACG------------------------------------------G-----------------------------------------------------AA--GCCAAAGAAAGAA----CAAC
droEre2 scaffold_4929:3383360-3383588 - CAGCAGCAG--------CATCAG----------------------C-------A--------------GCAGCAGCAA---CAGCCGGC-------------------------------------------------A---ATTATAAATTCAACAACGACGAC--------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCACTTCGTTGGTAATAAACTCGA-----------------------------------------------------------------------------------------CAGCAG-----------GAGCAGCTGAAC-------------------------AAGTTGTA--------GAGGAGTCATTAAAAGT--------GGCAGCAGCCGC---------------A---GC-------------------A------------------GCA------------------------------------------------------------------------------------------------G---CAACAGC---------------AGC-----AG---C------------------------------------------------------------------------AGCAGCAACAACAGCAA------------CAA-----------------------------------------CAGCAG---CAACAGC---AGCATCCGCAGCAACA------C---T----------------------------------------------------------------------------------------------------AC---------------CA--GCTA----AACAG----GAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CAGCATTGA--------CGTCGA----------------------T-------G--------------TCTACGTCAG---CTGTTGGCTTC---------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCCTAGATGTAAGTAAAAGCGA---------------------------------GACAGACAGAGGATAGAGAGAGAAGAGAGAGTGG------------------------------------------------------------------------GAGTAAGAAGGA--------GAGGCAGGATTAAACGG--------GATAATATACGT---------------A---GCAGAAGCA----------GAA------------------GCA------------------------------------------------------------------------------------------------TCAGCGGCAAC-----------------------GG------------------------------------------------------------------------------------CAGCGGCAG---CGGCAGAAGCAAGCAAAGAA-------------GAAGGAGCCAGCAACA---------------------------------------------G---CAGA----C----------GC----------------------------------------------------------------------ATCCATCAAAAC---------------AA--ACCAAAA-AAAAA----AAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CAGCATTGA--------CGTCGA----------------------T-------G--------------TCTACGTCAG---CTGTTGGCTTC---------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCCTAGATGTAAGTAAAAGCGA---------------------------------GACAGACAGAGGATAGAGAGAGAAGAGAGAGTGG------------------------------------------------------------------------GAGTAAGAAGGA--------GAGGCAGGATTAAACGG--------GATAATATACGT---------------A---GCAGAAGCA----------TCA------------------GCG------------------------------------------------------------------------------------------------TCAGCGGCAAC-----------------------GG------------------------------------------------------------------------------------CAGC---------GGCAGAAGCAAGCAAAGAA-------------GAAGGAGCCAGCAACA---------------------------------------------G---CAGA----C----------GC----------------------------------------------------------------------ATCCATCAAAAC---------------CA--ACCAA---AAAAA----AAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTGG------------------------------------------------------------------------GAGTAAGAAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAAGGA--------GAGGCAGGATTAAACGG--------G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...CATTGA--------CGTCGA----------------------T-------G--------------TCTACGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droWil2
CCATACTTT--------TTGTTA----------------------C-------T--T----------GTTTTGGT----------------TTGCCATTTAACCGAGAGCATACA-------------------------------------GAGTGGAAATACTGA----GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------AGA---------------AAGAACGAGA------------------------------------------------------------------------GAGTAAGAGAGA--------GAGAAAGGTGC----------------------------------------------------------------------------------------------------------------AAAAAAACGGATATTGGC----------------------------------TAGAAGCATCTTATGAA---ACAATTGAAGC---AACG--TGCTTC------TG---AGCAGG---------------------------------------------------------------------CAAAGGAGCAACATCCG------AAG-----------------------------------------------CATTAT---AAAA----------------------------------------ATCAACC----AC---------------------------------------------------------------------------------C----------------A----TCAAC-AACAA----CAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------AGA---------------AAGAACGAGA------------------------------------------------------------------------GAGTAAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
droVir3
CAGCAGCGA--------CGCCGG----------------------C-------G--------------ACGCTGTC-G---C----------------------------------------------TGCGACCGAAA----A-----------------------------------AAAAAACGACGTAAGAAAAAGAGCAGCATTAAGAAGAAGCCATGCGAAGAAGAAGAGCGAACGCATGAATATTTT----------------------------------------------------------------------------------------------TTTTTAGCTTAA-----------TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGCGTAAGCTAA-----AGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA--CAAAGAC------AAC-----AG------------------------------------------------------------------------------------CAGCAACAA---CAATA-AAGCAAAAGAAGAA-------------GAAGAAG----------------CAGCTA---C---ACGGAAGTCGCCAGCAACA------A---AAA-------------------------------------------------------------------------------------------------------------------CA--AGCA----AACAA----CGGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGAA-------------GAAGAAG----------------CAG......................................................................................................................................................................................20100.101000000000000000000000000000000000000000000000000000000000000001
droMoj3
CAACGACGA--------CGGCGA----------------------C-------G--------------GCAACGTTTG---C----------------------------------------------TGAG-------------------------------CCAGAGCC------------AG-----AG--------------------------------------------------------------------------CCAGA-GCCAGTGCTTTGAAAGCGGACAGCAAAAAGGATTG--AACGAAGAGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAGCGAGAGGC----------------------------------------AGTGAGAGT---------GAGGCAGAGGC---------------G---GG-------------------T------------------GCA---------------------------------------------------------------------------------------------GTCA---AAACAGC--AGG--------------------------------------------------------------------------------------------------AGG------------------CAA--------------------------------------------------TGGCGA---------------------------------------CGCACGTGAAGAC---GCAGCAAAGTATACGCACAAGCACACGCACACACACACACATACACA-----------CA---------------------------------------CA--CGCAAAC-GAATG----AAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................AG-------------------------------CCAGAGCC------------AG-----AG--------------------------------------------------------------------------CCAGA-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
droGri2
CAGCAGCAG--------CGGCAG----------------------C-------A--------------GCAGCAGCAG---CAG----------------------------------------------CG-------------------------------GCAG----------CA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCGGCAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGCAGCAGCAGCGGCAGCAGCAGCAGCGGCAG--------------------------------------CAGCAGCAGCAGCAGCAGCA---CCAACAGCAGC---AG--------------------CAGCAGCAGCGTCAACATCATCAGCAGCAGCAGCAGGAGCAGTTAAAACAGCAGCAACATCAGCAGCAGCAAAAACAGCAGCAGCAACAGCAG------------C-----------------------------------------AGCAGC---------------A---------------GCAGCAT---CAGC----A----------GCA------------------------------------------G-------------------------------------C---------------AG--CTAAAAC-AACAA----CAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CAGCAACAA--------CCACTC-----------TA---------C-------GACCAGGAAC-------A-GGC---------TTGGC------------------------------------------TCTAGAAAAGAA--------------------TAAACAGG------------AT-----CA--------------------------------------------------------------------------ACAACACGCACAA---------------------------------------CATGTAAGTGGAAAGTTAAATGGAAACTACATATGCGGGTCC-----------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------GCACAAA---A-------------------------------------------------------------------------GTATGCTACGGAAAGCAGCAGCAGCA----------GAA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAGC--------------------------------------------------------------------------------------------------------------AGCATCAGCATCGGTAGTGGCAACCAACAAC-------------CAAACAAC------------------------------------------------------------------CCAACA----AC------------------------------------------------GAGGCAAC--AT-------------CAACAAAAC----------------A--GCTA-CA-ATAAA----CAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC------------------------------------------------------------------CCAACA----AC------------------------------------------------GAGGCAAC--................................................................2111.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAGC--------------------------------------------------------------------------------------------------------------AGCAT.......................................................................................................................................................................................................................................................2170.141000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA----------GAA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................22150.071100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAGC--------------------------------------------------------------------------------------------------------------AGCATC......................................................................................................................................................................................................................................................21200.051000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC--------------------------------------------------------------------------------------------------------------AGCATCAGCA..................................................................................................................................................................................................................................................19200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----------GAA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAGC--------------------------------------------------------------------------------------------------------------............................................................................................................................................................................................................................................................19200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCA----------GAA------------------GCA------------------------------------------------------------------------------------------------GC...................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
droBip1
CAGCAGTGC--------CAGCAA----------------------C-------A--------------ACAACA---------AATAGCAAA---------------------AACTGCAT-------AGCGTTCGGCA---A-----AGCGCAGCAACAACAACAA----CAACAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGAAAGAAAGCACAAGAAACACAAACAACAACAACAA-----------CAACAATCGCACAAA---A----------------------CGTTGCAATCG-AA-GCCA------AAGTCGCAGCAGCAAC-----AGT---------------A---GCAACAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------TCAGCAGCAAC-----------------------AGCAGCAG------------------------------------------------------------------------------CGGCGGCAG-------------------------------------CAGAAG----------------CGGTAG---C---ATCGACGGCGGCAGCA---------A---CAAC----A----------A----------------------------------------------------------------------------------C----------------A----ACAAC-AATAA----TAACSizeHit CountTotal NormTotal
No Reads
droKik1
CACG-ACAG--------CAACAA----------------------C-------G-GC---G-------ACAG-----------------------------------------------------------------------------------CGACAAGAGCAA----CTGCAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------AGGAGGAGCAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAGAAGAAGGAGGAGGAGGAGCAGGAGTGGGAA--------------------------------------GAGCAGAAGGAGCAGGAGTA---GCAGGAGGAGC---AA--------------------GAGCAGG---------------------------------------------------------------------AGTAGCAGCAGGAGCTG------GAGGAGCAA-----------------------------------------GAGTAG---CAGGAGC---A---------------GCAGCAA---CAGC----A----------AC----------------------------------------------------------------------ATGCAGCAAACT---------------CA--ACGGGAG-CCGAA----AGCTSizeHit CountTotal NormTotal
No Reads
droFic1
TTGCACTGC--------TC--GA----------------------T-------GTCC-------------------------TGCTGGC------------------------------------------GACTGAGC----G-----------------------------------GAAAAGTGGTGAA------------------------------------------------------------------AGGCAGGAGAAAA-GCGACAGCTTCTCGTGCGGGCAAGCATAAAAATAA--CACGATGCCAAA---------------------------------------------------G-TGCCGACGAC---AAAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGC-----AGC---------------A---GCAGCAGC-------------AGAA---------------GAG------------------------------------------------------------------------------------------------GAAGAAGCAGC-----------------------------------------------------------------------------------------------------AGCAGCAGCAGAAGAAG-------------------------------------AAGAAG-CAG---------TAGCAG---C---------AGAA------------------G---TAGA----A----------GC----------------------------------------------------------------------GACAATGAGAAC------GAGAAAGGCCGAAGCGCAGC-GA--AATCAAAACSizeHit CountTotal NormTotal
No Reads
droEle1
CAGAAATCGTTGGGCGCCCAAG---------------------TGC-------A--------------ACTGCATCAAAATCCGTTGGCAGC---------------------------------------------------------------------------------------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGCCCCAACAGCTAGT-----------------------------TCATCAGAAAACGACGGTCGGAGCACAGA-------------------------------TTCAGCAACAACAAAAAGTATTTGT---------------------------------GGGACAACAGCA--------GCAGAAGATTTCCCAGG--------CACAACTTCAGC---------------A---GCAGCAGCA----------GCA------------------ACA------------------------------------------------------------------------------------------------GCAGCAGCAAC-----------------------AG---C------------------------------------------------------------------------AGCAGCAGCAACAGCAA------------C-----------------------------------------AGCAGCAG---CAACA---------------------------G---CAGC----A----------GC----------------------------------------------------------AACAGCAAAGAGCCTCTCTAGGGC---------------AA--GTTCAAC-AGCAA----CAGCSizeHit CountTotal NormTotal
No Reads
droRho1
ACG--ATGA--------CGTTGA----------------------T-------G--------------ACGACGTTGC---CGAGTTGCATT---------------------------------------------------------------------------------------TTCAAGAGCCACAACACAATGCCAAGTGCCAACAACAAGATGAGCGAAGGGGGAAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTGCCAAAGGC----------------------------------------AACCGCAGC---------AACACACTCGC---------------A---GC-------------------A------------------GTA------------------------------------------------------------------------------------------------G---CAGCAAC--------------------------AGCAGA---------------------------------------------------------------------AGTAGCAGCAACAGCGG------CAA-----------------------------------------------CAGCAG---------------------------------------CAACACACAAGCAGCA---GC----------------------------------------------------------AACAGTGAAAATATTTTTC---GC---------------TA--GCCAAGC-AG--A----ATCASizeHit CountTotal NormTotal
No Reads
droBia1
CAGCAAATG--------TTGAGA----------TTACACTAAAAGTAACTGCC-AACGGCAGCAGCG-----------------------------------------------------TCGTCGGCAGCG-------------------------------GCAGCAGC------------AG-----CA--------------------------------------------------------------------------GCAGAATGCAACGCATTTGCCGAGTGCAGCACTAAAA-TCAATTATGTAGCCAGC---------------------------------------------------G-CAGCAGCAAC---ATCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------GTA------------------------------------------------------------------------------------------------GCAGCAGCAGC-----------------------AG---C------------------------------------------------------------------------AGCAGCAGCAACAGCAG------------C-----------------------------------------AACGTCAG---CGACT---------------------------G---CAGC----A----------GCA------------------------------------------GCAGCGTGAAAATAG---------------------------------------TA--GTGA-AA-AAAAG----AGAASizeHit CountTotal NormTotal
No Reads
droTak1
CAACATCGG--------CAGCAAATGTTGAGA-TTACACTAAAAGTAACTGCC-AACGGGAGCAGCG-----------------------------------------------------ACGTCGGCAGAA-------------------------------GCAGCAGC------------AG-----CA--------------------------------------------------------------------------GCAGAATGCAACGCATTTGGAGAGTGCAGCTCTAAAA-TCAATTATGTAGCCAGC---------------------------------------------------G-CAGCAGCAAC---ATCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------GTA------------------------------------------------------------------------------------------------G---CAGCAAC-----------------------AG------------------------------------------------------------------------------------CAGCAGCAG------------CAA-----------------------------------------CATCAG---CGACTGC---A---------------GCAGCAG---CAGC----A----------GC------------------------------------------------GTGAAAATAG---------------T-----AGT---------------GA--AACAAAG-AGAAA----TAGCSizeHit CountTotal NormTotal
No Reads
droEug1
CAGCAACAC--------CTTAG---------------------AGC-------A--------------ACAACAACAA---CAGTGGCATTT---------------------------------------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGCGAAG-------------------------------------GCGGTGAAAGACGTT------------------------------------------------------------------------------GGGTGCGTCAGGCAGTCATGGGGGT----ATTGA-G---------ATGGCGCGATTTACCCG--------GATCGCGTATATC-GGGTTCTA----------------------------TCG------------------GCG------------------------------------------------------------------------------------------------GCAGCAGTAACAGCAGCGGC------AGCAAC--AC---C------------------------------------------------------------------------AACAA---------------CAATC--------------------------------ATACCCACAGCAGCAGCAACAACAA---------------------------------------TTC---------------------------------------------------------------------------------------GCATCAGCAC---------------CA--GCAGCAG-CAACA----CAACSizeHit CountTotal NormTotal
No Reads
dm3
CATACTTAA--------CAAATA---TTACGAAATACTACAGAGAAAAGTGCA-CGCAACAAAAGAA-----------------------------------------------------TAACAGGGGCTG-------------------------------GCCAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----------------------AATCGCAGACGGGC-GACA------TGGTTGCGGGTTAAAGAGATGCAA---------------AGCAGCAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATCAGCAGTTGC-----------------------------------------AGCAACAG------------------CAACAGCA---------G---CAGC----A----------AC----------------------------------------------------------------------AGCCGCCTAGGT---------------GA--GCTAGAC-AAAAA----GCGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------TGGTTGCGGGTTAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------TGGTTGCGGGTTATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACA........................................................................................................................................................................................................................................................19200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG------------------CAACAGCA---------G---CAGC----A----------AC----------------------------------------------------------------------....................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATC................................................................................................................................................................................................................................................2460.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------TGGTTGCGGGTTATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------C............................................................................................................................................................................................................................................................26200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCAT.................................................................................................................................................................................................................................................2370.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCAT.................................................................................................................................................................................................................................................2470.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATCA...............................................................................................................................................................................................................................................2650.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAAC.........................................................................................................................................................................................................................................................24200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATC................................................................................................................................................................................................................................................2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAG.................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATCAGCA............................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATCAGCA............................................................................................................................................................................................................................................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATCAGC.............................................................................................................................................................................................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATCA...............................................................................................................................................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-----------------------------------------AGCAACAG------------------CAACAGCA---------G---CAGC----.......................................................................................................................................2490.1110000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAG------------------CAACAGCA---------G---C..............................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------C............................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG------------------CAACAGCA---------G---CAGC----A----------............................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAG....................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCA...............................................................................................................................................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG------------------CAACAGCA---------G---CAGC----A----------AC----------------------------------------------------------------------A...................................................21200.1020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGC......................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGC......................................................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAG------------------CAACAGCA---------G---CAGC----.......................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGC................................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCA...............................................................................................................................................................................................................................................................................................................................................................................25200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC-----------------------------------------AGCAACAG------------------CAACAGCA---------G---CA.............................................................................................................................................22110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATC................................................................................................................................................................................................................................................22110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATC................................................................................................................................................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG--------------------------------------------------------------------------------------------------------------CAACAGCAGCATC................................................................................................................................................................................................................................................20120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACA----------GCA------------------GCA------------------------------------------------------------------------------------------------GCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG------------------CAACAGCA---------G---CAGC----A----------A...........................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-----------------------------------------AGCAACAG------------------CAACAGCA---------G---CAGC----A----------............................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------CAACAGCA---------G---CAGC----A----------AC----------------------------------------------------------------------AGC.................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAACATCAA--------TATCAG----------------------C-------A--------------TCCGCATCCG---T-AT---------------------------------------------CC-------------------------------GCAT----------CC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCCGTATCCGC---AT----CAAACATCCGTTATACAGCAACAGCAGTCAGTGACATC------------------------------------------------------------------------------GTACGAAT---------------------CCCTAAAA--------AAGTC-CAAATCACAAG--------GTGGGAGCACAACAGAGCACTACAGTAAACAACAGCTAACAGCAACCACTACA------------------ACA------------------------------------------------------------------------------------------------A---CTACAAC--------------------------------------------------------------------------------------------------------------------------AACAATAGCAACCAATTATAACAGCAAGCAATACAAGCAACAACAACA---------------------------------------------G---CAAA----A----------AC--------------------------------AACAACCTAA-AC-----------AG---------------------------------------CA--ACCAA----CCAA----ATAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
CTGCAACCA--------CCC-AA--------------------TGTGACAGTT-AGCA----------GCAGCAGCAC---CAG-----------------------------------------------------------------------TGGCAACAACAA----CAACGGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------------------------------------------------AGGGGGAGCAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTGCTCAATAC------------------CTACAATTGGCAGTGAGCTTTTCAAAGCCAACCTTGTGGCAGCAGCAGCAGCA---------GTCG---TCGCAGC---------------------TGAG---CAGC---------------------------------------------------------------------AGAGG------------------CAG--------------------------------------------------CAGCTA---------------------------------------CACAAGTCAGCAAGCAGCA------------------------------------------GC-------------AGCAGC-------------CAACCGTCAACGA-------AT--TCTGGCC----------AAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAGTCAGCAAGCAGCA------------------------------------------GC-------------AG..............................................................2311.0010001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CAGC---------------------------------------------------------------------AGAGG------------------CAG--------------------------------------------------CAGCTA---------------------------------------CACAAGT.....................................................................................................................................2711.0010001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCA---------GTCG---TCGCA............................................................................................................................................................................................................................................................................................................................................................................2020.5010001
droYak3
CTTCTGGCC------T-CGCCA-----------------------C-------C--C----------GTCTCTTT----------------CGCTCACTGCGC---------------------------------------------------------------------------------------------------------TATGT----------------------------GGCTAATTACTTTCGAAAGTCAAG-----------------------------------------------------------------------------------TTATTAGCGTGATTACAAAGGCATTGCACATGAGCCAGGACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGC-----AGC---------------A---GCAAAAGC-------------AGCAAAAGGAGCAACAGCAAC-AGCA--------------------------------------------------------------------------------------------GCAAAAGGAG--------------------------------------------------------------------------------------------------------------CAACAGCAA------------CAG-----------------------------------------CAGCAG---CAGCAAC---A---------------GCAGCAGCAGCAACACGCAACAACGAGGAACG------------------------------------------G-----------------------------------------------------AA--GCCAAAGAAAGAA----CAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................CAGGACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAGC-----AGC---------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.33101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC-----AGC---------------A---GCAAAAGC-------------AGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.06100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---CAGCAAC---A---------------GCAGCAGCAGCA.............................................................................................................................................24200.05101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------------------------------------------------------------------------------------------CAACAGCAA------------CAG-----------------------------------------CAGCAG---CA.................................................................................................................................................................................21200.05100010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAA------------CAG-----------------------------------------CAGCAG---CAGCAAC---A---------------.........................................................................................................................................................26200.05100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---CAGCAAC---A---------------GCAGCA...................................................................................................................................................19200.05101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---CAGCAAC---A---------------GCAGCAGCAGCAAC...........................................................................................................................................26200.05101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAA------------CAG-----------------------------------------CAGCAG---CAGCA..............................................................................................................................................................................22200.05100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------CAG-----------------------------------------CAGCAG---CAGCAAC---A---------------GC.......................................................................................................................................................21200.05100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-----------------------------------------CAGCAG---CAGCAAC---A---------------GCAGCA...................................................................................................................................................22200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAA------------CAG-----------------------------------------CAGCAG---CAGCAAC---.........................................................................................................................................................................23200.05100000100000
droEre2
CAGCAGCAG--------CATCAG----------------------C-------A--------------GCAGCAGCAA---CAGCCGGC-------------------------------------------------A---ATTATAAATTCAACAACGACGAC--------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCACTTCGTTGGTAATAAACTCGA-----------------------------------------------------------------------------------------CAGCAG-----------GAGCAGCTGAAC-------------------------AAGTTGTA--------GAGGAGTCATTAAAAGT--------GGCAGCAGCCGC---------------A---GC-------------------A------------------GCA------------------------------------------------------------------------------------------------G---CAACAGC---------------AGC-----AG---C------------------------------------------------------------------------AGCAGCAACAACAGCAA------------CAA-----------------------------------------CAGCAG---CAACAGC---AGCATCCGCAGCAACA------C---T----------------------------------------------------------------------------------------------------AC---------------CA--GCTA----AACAG----GAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGGTAATAAACTCGA-----------------------------------------------------------------------------------------CAGCAG-----------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000004
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGGTAATAAACTCGA-----------------------------------------------------------------------------------------CAGCAG-----------G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000003
................................................................................................................................................TATAAATTCAACAACGACGAC--------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAC-------------------------AAGTTGTA--------GAGGAGTCATTAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAA------------CAA-----------------------------------------CAGCAG---CAACAGC---AGC......................................................................................................................................................................2850.2010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------------------------------------------------------------------------------------------------G---CAACAGC---------------AGC-----AG---C------------------------------------------------------------------------AGCA.................................................................................................................................................................................................................................................................21200.1533000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------------CAA-----------------------------------------CAGCAG---CAACAGC---AGCA.....................................................................................................................................................................25110.0910000010
....AGCAG--------CATCAG----------------------C-------A--------------GCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------CAA-----------------------------------------CAGCAG---CAACAGC---A........................................................................................................................................................................20200.0511000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------A---GC-------------------A------------------GCA------------------------------------------------------------------------------------------------G---CAACAGC---------------AGC-----AG---C------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................23200.0510100000
......CAG--------CATCAG----------------------C-------A--------------GCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100
.AGCAGCAG--------CATCAG----------------------C-------A--------------GCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC---------------AGC-----AG---C------------------------------------------------------------------------AGCAGCAAC............................................................................................................................................................................................................................................................20200.0511000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAA------------CAA-----------------------------------------CAGC........................................................................................................................................................................................19200.0510100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------GCA------------------------------------------------------------------------------------------------G---CAACAGC---------------AGC-----AG---C------------------------------------------------------------------------AGCA.................................................................................................................................................................................................................................................................22200.0510000010

Generated: 05/18/2015 at 05:00 AM