ID:

dps_2605

 Coordinate:

XL_group1e:631680-631830 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.9 -9.8 -9.6

Flybase annnotation

exon [dpse_GLEANR_718:1]; CDS [Dpse\GA10838-cds]; intron [Dpse\GA10838-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
  1. dps_2605  XL_group1e:631730-631751 +
  2. 3:9652785-9652806 -
  3. 3:9961378-9961399 +
  4. 2:27299131-27299152 -
  5. 4_group3:4014002-4014023 -
  6. XL_group1a:3684481-3684502 -
star
  1. dps_2605  XL_group1e:631759-631780 +
  2. XL_group1e:638645-638666 +
  3. XL_group1e:3879450-3879471 +
  4. XL_group1e:4590716-4590737 +
  5. XL_group1e:7503736-7503757 +
  6. 3:12611111-12611132 +
  7. 2:2783639-2783660 +
  8. 2:11753392-11753413 +
  9. 2:18517010-18517031 +
  10. 2:19826510-19826531 +
  11. 2:24083488-24083509 +
  12. 2:28342624-28342645 +
  13. 2:28758427-28758448 +
  14. XL_group3a:757988-758009 +
  15. XR_group8:2533100-2533121 +
  16. 4_group2:649872-649893 +
  17. XR_group6:2272014-2272035 +
  18. XR_group6:6048185-6048206 +
  19. XL_group1a:3368326-3368347 +
  20. XL_group1a:5353008-5353029 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCGCCTCCAGCAGCAGCGCGCCGCGATGCTGGCCGCCCGCAACAGCACCAGTCAGATACCGCCGCCACCGCCTCCTGTGGGCAGTGCCCAGCAGCAGCAGCAGCAACAGCAGCCGCAGCAGCAACCGCAACAGCAGCAGCAGCAGCAGCAGCCACAGCAGCAGAAACCGCAGTCGGAGGAGGACCTGCAGGGCGTCTGCACGGAGTGTGCCGAGTGCGCAGAATGCGCCGCCAAACAGCTACAGGAAGCAG
****************************************************************************************************........((.((.((.((.((....((....)).)).)).)).)).))..**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 GSM343916
embryo
 V112
male body		 M062
head
...........................................................................GGTGGGCAGTGCCCAGCGGTA........................................................................................................................................................... 21 3 3 0.33 1 1 0 0 0
...................................................................................GTGACCAGCAGCAGCAGCAGCAACA............................................................................................................................................... 25 1 4 0.25 1 1 0 0 0
....................................................................................................CAGCAACAGCAGCCGCAGCAGC................................................................................................................................. 22 0 6 0.17 1 1 0 0 0
.....................................................................................................AGCAACAGCAGCCGCAGCA................................................................................................................................... 19 0 7 0.14 1 1 0 0 0
...................................................................................................GCAGCAAGAGCAGCCGCAGCAGC................................................................................................................................. 23 1 9 0.11 1 1 0 0 0
...........................................................................................CAGCAGCAGCAGCAACAGC............................................................................................................................................. 19 0 20 0.10 2 2 0 0 0
.....................................................................................................AGCAACAGCAGCCGCAGCAGCCAC.............................................................................................................................. 24 1 12 0.08 1 0 1 0 0
............................................................................................AGCAGCAGCAGCAAGAGCAGCCGC....................................................................................................................................... 24 1 13 0.08 1 0 0 1 0
........................................................................................................................................................................GTAGCCGTAGGAGGACCTGC............................................................... 20 3 15 0.07 1 0 0 1 0
..................................................................................................AGCAGCAAGAGCAGCCGCAGC.................................................................................................................................... 21 1 15 0.07 1 1 0 0 0
............................................................................................................................CCGCAACAGCAGCAGCAGCAGCA........................................................................................................ 23 0 18 0.06 1 0 1 0 0
.................................................................................................................................ACAGCAGCAGCAGCAGCAGCAG.................................................................................................... 22 0 20 0.05 1 1 0 0 0
........................................................................................................................................CAGCAGCAGCAGCAGCCACAGC............................................................................................. 22 0 20 0.05 1 0 0 0 1
...................................................................................................................................................................AAACCGCTGGCGCAGGAGG..................................................................... 19 3 20 0.05 1 1 0 0 0
.................................................................................................................................ACAGCAGCAGCAGCAGCAGCA..................................................................................................... 21 0 20 0.05 1 1 0 0 0
..............................................................................................................................GCAACAGCAGCAGCAGCAGCA........................................................................................................ 21 0 20 0.05 1 0 1 0 0
.........................................................................................AGCAGCAGCAGCAGCAACAGC............................................................................................................................................. 21 0 20 0.05 1 1 0 0 0
............................................................................................................................CCGCAACAGCAGCAGCAGCAG.......................................................................................................... 21 0 20 0.05 1 1 0 0 0
................................................................................................................................AACAGCAGCAGCAGCAGCAGCA..................................................................................................... 22 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

CGCGGAGGTCGTCGTCGCGCGGCGCTACGACCGGCGGGCGTTGTCGTGGTCAGTCTATGGCGGCGGTGGCGGAGGACACCCGTCACGGGTCGTCGTCGTCGTCGTTGTCGTCGGCGTCGTCGTTGGCGTTGTCGTCGTCGTCGTCGTCGTCGGTGTCGTCGTCTTTGGCGTCAGCCTCCTCCTGGACGTCCCGCAGACGTGCCTCACACGGCTCACGCGTCTTACGCGGCGGTTTGTCGATGTCCTTCGTC
****************************************************************************************************........((.((.((.((.((....((....)).)).)).)).)).))..**************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
....GGGGTCGTCGTTGCGCGGC.................................................................................................................................................................................................................................... 19 2 4 0.25 1 1
.........................................................................................................................................................................................................................CTTCTTGCGCGGCGGTTTG............... 19 2 5 0.20 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1e:631630-631880 + dps_2605 GCGCCTCCAGCAGCAGCGCGCCGCGATGCTGGCCGCCCGCAACA----------GC------A---C------CAGTCAGATACCGCCGCCACCGCCTCCT---------GTGGGCAGTGCC---CAGCAGCAGCAGCAGCAACAGCAGCCGCAGCAGCAACCGC---AACAGCAGCAGCAG---------CAGCAGCA---------------GCCACAGC---------------------A---------------------------------------------------GCAGAAACCGCAGTCGGAGGAGGACCTGCAGGG-CGTCTGC-AC--GGAGTGTGCCGAGTGCGCAGAAT-GCGCCGCCAAACAGCTACAGGAAGCAG
droPer2 scaffold_30:585650-585897 - GCGCCTCCAGCAGCAGCGCGCCGCGATGCTGGCCGCCCGCAACA----------GC------A---C------CAGTCAGATACCGCCGCCACCGCCTCCT---------GTGGGCAGTGCC---CAGCAGCAGCAGCAGCAGCAACAGCAGCCGCAGCAGCAAC---CGCAGCAGCAGCAG---------CAGCAG------------------CCACAGC---------------------A---------------------------------------------------GCAGAAACCGCAGTCGGAGGAGGACCTGCAGGG-CGTCTGC-AC--GGAGTGTGCCGAGTGCGCAGAAT-GCGCCGCCAAACAGCTACAGGAAGCAG
droWil2 scf2_1100000004515:859179-859495 + dwi_1040 ACGTTTGCAACAGCAACGTGCGGCCATGTTGGCCGCTCGTAATA----------GC------A------A---CAGTCAAATACCGCCACCACCGCCACCC---------GTTGGAAGTGCT---CAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAAC---AACAACAGCAGCAG---------CAACAACAACA---------------GCAGCAGCAGCAGGCTCAACAACACCAT---CAACAGCAGCAACATCATGGCAC---ACAGCAGCAACATCATGGTGTACAGCAGCAACAGCCAGACGAGGACCTTCAGGG-CGTTTGC-AC--AGAATGTGCGGAATGCGCTGAAT-GCGCCGCCAAACAGTTACAAGAAGCAG
droVir3 scaffold_12928:401330-401604 + GCGTCTGCAGCAGCAGCGTGCTGCGATGTTGGCGGCGCGCAACA----------GCGGCAGCAACAGCAA---CAGTCAAATACCGCCGCCGCCACCGCCC---------GCAGGCGGCGCT---CAGCAACAACAACAACAACAACAACAGCAACAACAGCAAC---AACAACAGCAACAA---------CAACAACAACA---------------------------------------------GCAACAACAGCAGCA---------------------ACA---------ACAACAGCCGCTGCCCGATGAGGACCTGCAGGG-CGTTTGC-AC--CGAGTGCGCCGAGTGCGCTGAAT-GCGCCGCCAAGCAGCTACAGGATGCAG
droMoj3 scaffold_6328:450722-451014 - GCGTCTGCAGCAGCAGCGTGCCGCAATGTTGGCGGCGCGCAACG----------GC------A---ATGGCAACAATCAAGTACCGCCACCGCCGCCGCCT---------GTGGGCAGCGCT---CAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGC---AGCAGCAACAACAG---------CAGCAA------------------CAACAGC---------------------AGCAGCAACAACAACAGCATCATGCCAC---ATCCCAGCAGCA---------GCAGCAGCAGCAGGCCGATGAGGACCTGCAGGG-CGTTTGC-AC--TGAGTGCGCCGAGTGTGCCGAAT-GCGCCGCAAAGCAGCTACAGGATGCAG
droGri2 scaffold_15203:11932870-11933119 + GAATCCCCAGCAGCAACAGCCGGGCAT-C----------CAACAGGGTGCACTGGGACC---A---CGAG--------------------CGCCGCAACCCAATCAACTGCTTGGACATGCT---CAGCAGCAACAGCAACAACAACAACAGCAGCAGCAGCAAC---AACAGCAGCAGCAG---------CAACAG------------------CAGCAGC---------------------A------------------GCCCGGCAC---AT------------------CTCAGCAGCAG--------GGAGTACCCTCAGCGTCGCCTGTTAGCGGGACTGCTCCG---GCGCAGAATAGCATGTCCGAGGAGCGA-AAGAAACAA
droAna3 scaffold_13417:2325416-2325678 + dan_3318 GCGATTGCAGCAACAGCGGGCCGCCATGCTGGCCGCTCGCAACG----------GT------G---CCGG---CGGGCAGATTCCGCCTCCGCCCCCGCCC---------GTTGGCAGTGCC---CAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCA------------------------------------------------GCAGCAACAAC---------------------AATCGCATCAGCAACCTCATCATGGGAC---GA------------------TGCAGCAGCAGCCGTCGGAGGAGGACCTCCAGGG-GGTCTGC-AC--CGAGTGTGCCGAGTGCGCCGAGT-GTGCTGCCAAGCAGCTCCAGGAAGCAG
droBip1 scf7180000395982:1321-1565 - GCGGTTGCAGCAGCAGCGGGCTGCGATGCTGGCCGCTCGCAACA----------GT------G---CCGG---CGGACAGATACCTCCTCCGCCCCCGCCC---------GTTGGCAGTGCC---CAGCAGCAGCAGCAGCAACAGCA---------------------------------------------------------------GCAGCAACAAC---------------------AGGCGC---AGCAACCTCATCATGGGAC---GA------------------TGCAGCAGCAGCCGACGGAGGAGGACATCCAGGG-GGTCTGC-AC--CGAGTGTGCTGAGTGCGCCGAGT-GTGCTGCCAAGCAGCTCCAGGAAGCAG
droKik1 scf7180000302264:369947-370239 + GCGCCTCCAGCAGCAGCGCGCTGCCATGCTGGCCGCTCGCAATG----------GAGCCACCGCTACCAATGCTGGCCAGATACCGCCACCGCCACCGCCC---------GTAGGCACGGCC---CAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAAC---AGCAGCAGCAACAG---------CA---------------------TCAGCAAC---------------------AGTCGCATCAACAGCCGCATCATGGAGCTGCCA------------------TGCAGCAGCAGCAATCGGAAGAGGATCTGCAGGG-CGTGTGC-AC--AGAGTGTGCCGAGTGCGCCGAGT-GCGCGGCCAAGCAGCTCCAGGAAGCAG
droFic1 scf7180000453882:692628-692911 + GCGGCTGCAGCAGCAGCGTGCCGCGATGCTGGCTGCCCGCAACA----------CC------A---CAGG---CGGTCAGATACCGCCCCCGCCCCCTCCG---------GTTGGCAGTGCCGCCCAACAGCAGCAACAGCAGCAGCAACAGCAGCAACAGCAGC---AGCAG---CA---------------------------------GCAGCAGCAAC---------------------AGTCGCATCAGCAACCGCATCATGCGGC---ACTGCAGCAGCA---------GCAGCAGCAATCGGCGGAGGAGGAGCTGCAGGG-CGTCTGC-AC--CGAGTGTGCCGAGTGCGCCGAGT-GCGCGGCCAAGCAGCTCCAGGAAGCAG
droEle1 scf7180000490214:539477-539766 - GCGCCTGCAACAGCAACGTGCCGCGATGCTGGCCGCCCGAAATA----------CC------A---CAAGCGGTGGTCAGATACCACCTCCGCCCCCGCCC---------GTCGGCAGTGCC---CAGCAGCAGCAACAGCAGCAACAACAGCAGCAACAACAAC---AGCAGCAACAACAA---------CAACAGCA------------GCAGCAGCAAC---------------------AGCAACACCAGCAACCTCATCATGGAGC---AA------------------TGCAGCAGCAGCAATCGGAGGATGACCTGCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAG
droRho1 scf7180000779189:201967-202265 - GCGCCTGCAACAACAGCGCGCCGCGATGCTGGCCGCCCGCAACA----------CC------A---CCAG---CGGTCAGATACCGCCCCCGCCCCCGCCC---------GTCGGCAGTGCC---CAGCAGCAGCAGCAACAACAACAGCAACAGCAGCAGCAGC---AGCAACAGCAACAA---------CAACAGCAACAACAGCAGCAACAGCAGCCAC---------------------AGCCACACCAGCAACCTCATCATGAAGC---AC------------------TGCAGCAGCAGCAATCGGAGGAGGACCTGCAGGG-CGTCTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAG
droBia1 scf7180000302126:3767461-3767762 + GCGGCTGCAGCAGCAGCGCGCCGCCATGCTGGCCGCCCGCAACA----------CC------A---CGGG---CGGTCAGATACCGCCCCCGCCCCCGCCC---------GTCGGCACTGCC---CAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGC---AACAACAGCAGCAA---------CAACAGCAGCAGCAACAGCAGCAGCAGCAAC---------------------AGTCGCACCAGCAACCTCATCATGGAGCTGCAC------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTCCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAG
droTak1 scf7180000415394:667318-667601 + GCGCCTGCAGCAGCAGCGTGCCGCGATGTTGGCCGCCCGCAACA----------CC------A---CAAG---CGGTCAGATTCCGCCCCCGCCCCCGCCC---------GTCGGCAGTGCC---CAGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAACAACAGCAGCAGCAA---------CA------------------ACAGCAACAGC---------------------AGTCACACCAGCAACCTCATCACGGAGC---AA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTGCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAG
droEug1 scf7180000409901:146201-146508 + GCGTTTGCAACAACAGCGTGCCGCAATGTTGGCTGCCCGCAATA----------CC------A---CAGG---CGGTCAGATACCGCCTCCGCCTCCACCC---------GTCGGCAGTGCC---CAGCAGCAGCAGCAACAACAACAACAGCAACAGCAGCAAC---AACAACAACAGCAGCAACAGCAACAACAGCAGCAGCAGCAGCAACAGCAACAAC---------------------AGCCACATCAGCAACCTCATCATGGAGC---TA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTCCAGGG-CGTTTGC-AC--TGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAG
dm3 chrX:10806694-10806968 + GCGGCTGCAGCAGCAGCGTGCCGCAATGCTGGCCGCCCGCAACA----------CC------A---CAAG---CGGTCAGATACCGCCACCACCCCCGCCC---------GTTGGCACTGCC---CAGCAGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAAC---AACAGCAACAA---------------------------------CAGCAGCAAC---------------------AGTCGCATCAGCAGCCGCATCATGGAGC---CA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTCCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAACAGCTCCAGGAAGCAG
droSim2 x:10265048-10265331 + GCGGCTGCAGCAGCAGCGTGCCGCAATGCTGGCCGCCCGCAACA----------CC------A---CAGG---CGGTCAGATACCGCCCCCACCCCCGCCC---------GTTGGCACTGCT---CAGCAACAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAACAG---------CA------------------GCAGCAGCAAC---------------------AGTCGCATCAGCAGCCGCATCATGGAGC---CA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTCCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAACAGCTCCAGGAAGCAG
droSec2 scaffold_15:1510064-1510344 + GCGGCTGCAGCAGCAGCGTGCCGCAATGCTGGCCGCCCGCAACA----------CC------A---CAAG---CGGTCAGATACCGCCCCCACCCCCGCCC---------GTTGGCACTGCT---CAGCAACAGCAGCAGCAACAGCAACAGCAGCAGCAGCAAC---AGCAGCAACAACAG---------CA------------------GCAGCAGCAAC---------------------AGTCGCATCAGCAGCCGCATCATGGAGC---CA------------------TGCAGCAGCAGCAGTCGGAGGAGGAACTCCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAACAGCTCCAGGAAGCAG
droYak3 X:11312509-11312807 - dya_1393 GCGGCTGCAGCAGCAGCGTGCCGCAATGCTGGCCGCCCGCAACA----------CC------A---CAGG---CGGTCAGATACCGCCCCCACCCCCGCCC---------GTTGGCACTGCT---CAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAACAGC---AGCAGCAGCAGCAA---------CAGCAGCAGCAACAGCAGCAGCAGCAGCAAC---------------------AGTCGCATCAGCAACCGCATCATGGAGC---CA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTCCAGGG-CGTTTGC-AC--CGAGTGTGCGGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAG
droEre2 scaffold_4690:4320221-4320492 - der_371 GCGGCTGCAGCAGCAGCGCGCCGCAATGCTGGCCGCCCGCAGTA----------CC------A---CAGG---CGGGCAGATACCGCCCCCGCCCCCGCCC---------GTCGGCAGTGCC---CAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAGC---AGCAGCAGCAA------------------------------------CAGCAAC---------------------AGTCGCATCAGCAACCGCATCATGGAGC---CA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTGCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAGT-GTGCGGCCAAGCAGCTCCAGGAAGCAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCGCCTCCAGCAGCAGCGCGCCGCGATGCTGGCCGCCCGCAACA----------GC------A---C------CAGTCAGATACCGCCGCCACCGCCTCCT---------GTGGGCAGTGCC---CAGCAGCAGCAGCAGCAACAGCAGCCGCAGCAGCAACCGC---AACAGCAGCAGCAG---------CAGCAGCA---------------GCCACAGC---------------------A---------------------------------------------------GCAGAAACCGCAGTCGGAGGAGGACCTGCAGGG-CGTCTGC-AC--GGAGTGTGCCGAGTGCGCAGAAT-GCGCCGCCAAACAGCTACAGGAAGCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................CAGCAACAGCAGCCGCAGCAGC.........................................................................................................................................................................................................................................2260.1710100000000
..........................................................................................................................................AGCAACAGCAGCCGCAGCA...........................................................................................................................................................................................................................................1970.1410100000000
................................................................................................................................CAGCAGCAGCAGCAACAGC.....................................................................................................................................................................................................................................................19200.1020200000000
.................................................................................................................................................................CCGC---AACAGCAGCAGCAG---------CAGCA....................................................................................................................................................................................................23180.0610000100000
.........................................................................................................................................................................ACAGCAGCAGCAG---------CAGCAGCA---------------G.................................................................................................................................................................................22200.0510100000000
................................................................................................................................................................................CAGCAG---------CAGCAGCA---------------GCCACAGC---------------------.....................................................................................................................................................22200.0510001000000
.........................................................................................................................................................................ACAGCAGCAGCAG---------CAGCAGCA---------------..................................................................................................................................................................................21200.0510100000000
...................................................................................................................................................................GC---AACAGCAGCAGCAG---------CAGCA....................................................................................................................................................................................................21200.0510000100000
..............................................................................................................................AGCAGCAGCAGCAGCAACAGC.....................................................................................................................................................................................................................................................21200.0510100000000
.................................................................................................................................................................CCGC---AACAGCAGCAGCAG---------CAG......................................................................................................................................................................................................21200.0510100000000
........................................................................................................................................................................AACAGCAGCAGCAG---------CAGCAGCA---------------..................................................................................................................................................................................22200.0510000100000
droPer2
GCGCCTCCAGCAGCAGCGCGCCGCGATGCTGGCCGCCCGCAACA----------GC------A---C------CAGTCAGATACCGCCGCCACCGCCTCCT---------GTGGGCAGTGCC---CAGCAGCAGCAGCAGCAGCAACAGCAGCCGCAGCAGCAAC---CGCAGCAGCAGCAG---------CAGCAG------------------CCACAGC---------------------A---------------------------------------------------GCAGAAACCGCAGTCGGAGGAGGACCTGCAGGG-CGTCTGC-AC--GGAGTGTGCCGAGTGCGCAGAAT-GCGCCGCCAAACAGCTACAGGAAGCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................GCAGCAAC---CGCAGCAGCAGCAG---------C........................................................................................................................................................................................................2330.331001000
..................................................................................................................................................................................GCAG---------CAGCAG------------------CCACAGC---------------------A---------------------------------------------------GCA..............................................................................................21120.081000010
..........................................................................................................................................AGCAGCAACAGCAGCCGCA...........................................................................................................................................................................................................................................19130.081001000
................................................................................................................................................AACAGCAGCCGCAGCAGC......................................................................................................................................................................................................................................18170.061010000
droWil2
ACGTTTGCAACAGCAACGTGCGGCCATGTTGGCCGCTCGTAATA----------GC------A------A---CAGTCAAATACCGCCACCACCGCCACCC---------GTTGGAAGTGCT---CAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAAC---AACAACAGCAGCAG---------CAACAACAACA---------------GCAGCAGCAGCAGGCTCAACAACACCAT---CAACAGCAGCAACATCATGGCAC---ACAGCAGCAACATCATGGTGTACAGCAGCAACAGCCAGACGAGGACCTTCAGGG-CGTTTGC-AC--AGAATGTGCGGAATGCGCTGAAT-GCGCCGCCAAACAGTTACAAGAAGCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................ACAGCCAGACGAGGACCT......................................................................1820.50100010
....................................................................................................................................................................................................ACAACA---------------GCAGCAGCAGCA...................................................................................................................................................................18200.45900090
............................................................................................................................................................................ACAGCAGCAG---------CAACAACA.................................................................................................................................................................................................18200.35700070
....................................................................................................................................................................................................ACAACA---------------GCAGCAGCAGCAGGC................................................................................................................................................................2150.20100001
............................................................................................................................................................................ACAGCAGCAG---------CAACAACAACA---------------GC.............................................................................................................................................................................23200.15300030
....................................................................................................................................................................................AG---------CAACAACAACA---------------GCAGCA.........................................................................................................................................................................19200.15300030
................................................................................................................................................................ACAAC---AACAACAGCAGCAG---------CAAC.....................................................................................................................................................................................................23200.10200020
...........................................................................................................................................................CAGCAACAAC---AACAACAGCAGCAG---------C........................................................................................................................................................................................................25200.10201001
..............................................................................................................................................................................AGCAGCAG---------CAACAACAACA---------------GCA............................................................................................................................................................................22200.10200020
.............................................................................................................................................AGCAGCAGCAGCAACAGCAACAA....................................................................................................................................................................................................................................23200.10200020
......................................................................................................................................................................................................AACA---------------GCAGCAGCAGCAGGC................................................................................................................................................................19170.06100010
....................................................................................................................................................................................................ACAACA---------------GCAGCAGCAGCAGG.................................................................................................................................................................20170.06100010
........................................................................................................................CT---CAACAGCAGCAGCAGCAG.........................................................................................................................................................................................................................................................20180.06101000
............................................................................................................................................CAGCAGCAGCAGCAACAG..........................................................................................................................................................................................................................................18200.05100010
............................................................................................................................................................AGCAACAAC---AACAACAGCAGCAG---------CAAC.....................................................................................................................................................................................................27200.05100010
...........................................................................................................................................GCAGCAGCAGCAGCAACAGCA........................................................................................................................................................................................................................................21200.05100010
..................................................................................................................................GCAGCAGCAGCAGCAGCAGCAGC...............................................................................................................................................................................................................................................23200.05101000
..............................................................................................................................................................................AGCAGCAG---------CAACAACAACA---------------GCAGC..........................................................................................................................................................................24200.05100010
..........................................................................................................................................................ACAGCAACAAC---AACAACAGCAG.....................................................................................................................................................................................................................22200.05100001
..............................................................................................................................................................................AGCAGCAG---------CAACAACAACA---------------GCAGCA.........................................................................................................................................................................25200.05100010
..........................................................................................................................................................ACAGCAACAAC---AACAACAGCAGCA...................................................................................................................................................................................................................24200.05100010
........................................................................................................................................................CAACAGCAACAAC---AACAACAGCAGCAG---------.........................................................................................................................................................................................................27200.05100010
................................................................................................................................................................................CAGCAG---------CAACAACAACA---------------GCAG...........................................................................................................................................................................21200.05101000
..................................................................................................................................................................................................CAACAACA---------------GCAGCAGCAGCA...................................................................................................................................................................20200.05101000
...............................................................................................................................................................................GCAGCAG---------CAACAACAACA---------------GCAGCAG........................................................................................................................................................................25200.05100010
.................................................................................................................................AGCAGCAGCAGCAGCAGCAGC..................................................................................................................................................................................................................................................21200.05101000
..............................................................................................................................................................CAACAAC---AACAACAGCAGCAG---------CAACAAC..................................................................................................................................................................................................28200.05100010
.............................................................................................................................................................GCAACAAC---AACAACAGCAGCAG---------.........................................................................................................................................................................................................22200.05100010
.........................................................................................................................................................AACAGCAACAAC---AACAACAGCAGCAG---------C........................................................................................................................................................................................................27200.05101000
.........................................................................................................................................................................ACAACAGCAGCAG---------CAACAACAACA---------------...............................................................................................................................................................................24200.05100010
...................................................................................................................................................................................................AACAACA---------------GCAGCAGCAGCA...................................................................................................................................................................19200.05101000
.........................................................................................................................................................AACAGCAACAAC---AACAACAGCAGC....................................................................................................................................................................................................................24200.05101000
...................................................................................................................................................................AC---AACAACAGCAGCAG---------CAACAA...................................................................................................................................................................................................22200.05100010
.....................................................................................................................................................................................G---------CAACAACAACA---------------GCAGCAGCA......................................................................................................................................................................21200.05100010
....................................................................................................................................................................................AG---------CAACAACAACA---------------GCAGCAGCAGCA...................................................................................................................................................................25200.05100010
.................................................................................................................................................................CAAC---AACAACAGCAGCAG---------CAACAA...................................................................................................................................................................................................24200.05100010
droVir3
GCGTCTGCAGCAGCAGCGTGCTGCGATGTTGGCGGCGCGCAACA----------GCGGCAGCAACAGCAA---CAGTCAAATACCGCCGCCGCCACCGCCC---------GCAGGCGGCGCT---CAGCAACAACAACAACAACAACAACAGCAACAACAGCAAC---AACAACAGCAACAA---------CAACAACAACA---------------------------------------------GCAACAACAGCAGCA---------------------ACA---------ACAACAGCCGCTGCCCGATGAGGACCTGCAGGG-CGTTTGC-AC--CGAGTGCGCCGAGTGCGCTGAAT-GCGCCGCCAAGCAGCTACAGGATGCAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................ACA---------ACAACAGCCGCTGCCCGA...............................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AGCAGCA---------------------ACA---------ACAACAGCCGC......................................................................................2170.292002000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AACAGCAGCA---------------------ACA---------ACAACAGCC........................................................................................2260.171000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................AGCAACAACAACAACAACA.......................................................................................................................................................................................................................................................19200.102002000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................CAACAGCAAC---AACAACAGCAA.....................................................................................................................................................................................................................21200.102002000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AACAACAACAACAACAACAGCAACA...........................................................................................................................................................................................................................................25200.102002000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................A---------------------------------------------GCAACAACAGCAGCA---------------------ACA---------.................................................................................................19200.102001000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................................................................................................ACA---------------------------------------------GCAACAACAGCAGCA---------------------AC...........................................................................................................20200.102000000000000000001000000000000000010000000000000000000000000000
................................................................................................................................................................................................AACAACAACA---------------------------------------------GCAACAACAGCAGCA---------------------AC...........................................................................................................27180.061000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................................................CAGCAAC---AACAACAGCAAC....................................................................................................................................................................................................................19200.051000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................CAACAACAACA---------------------------------------------GCAACAACAGCAG....................................................................................................................................24200.051000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................ACAACAGCAAC---AACAACAGCAA.....................................................................................................................................................................................................................22200.051000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................CAACAACAGCAAC---AACAACAGC.......................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CAACAACAACAGCAACAACAGC......................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CAACA---------------------------------------------GCAACAACAGCAGCA---------------------A............................................................................................................21200.051000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................AACAACAACAACAGCAACAACAGCAAC---................................................................................................................................................................................................................................27200.051000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................ACAACAACAACAGCAACAACAGCAAC---AAC.............................................................................................................................................................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AGCAAC---AACAACAGCAACAA---------.........................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................AACAGCAACAACAGCAAC---A...............................................................................................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................CAACAACAACAACAGCAACAA..........................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AACAA---------CAACAACAACA---------------------------------------------GCAACAACA........................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................CAACAACAACA---------------------------------------------GCAACAACAGCAGCA---------------------.............................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................CAACAACAACAACAACAACAG................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................CAACAACAACAACAGCAAC............................................................................................................................................................................................................................................19200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................AACAACAGCAAC---AACAACAGCAA.....................................................................................................................................................................................................................23200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCAACAACAGCAGCA---------------------ACA---------AC...............................................................................................20200.051000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................CAACA---------------------------------------------GCAACAACAGCAGCA---------------------.............................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................ACAACAACAACAACAACAGCA..............................................................................................................................................................................................................................................21200.051000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................CAGCAACAACAGCAAC---AACAAC..........................................................................................................................................................................................................................22200.051000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................AGCAACAA---------CAACAACAACA---------------------------------------------GCA..............................................................................................................................................22200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................AA---------CAACAACAACA---------------------------------------------GCAACAAC.........................................................................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................ACAACAGCAACAACAGCAAC---A...............................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................ACA---------------------------------------------GCAACAACAGCAGCA---------------------ACA---------AC...............................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................AACAGCAAC---AACAACAGCA......................................................................................................................................................................................................................19200.051000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................C---AACAACAGCAACAA---------CAACAA...................................................................................................................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
droMoj3
GCGTCTGCAGCAGCAGCGTGCCGCAATGTTGGCGGCGCGCAACG----------GC------A---ATGGCAACAATCAAGTACCGCCACCGCCGCCGCCT---------GTGGGCAGCGCT---CAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGC---AGCAGCAACAACAG---------CAGCAA------------------CAACAGC---------------------AGCAGCAACAACAACAGCATCATGCCAC---ATCCCAGCAGCA---------GCAGCAGCAGCAGGCCGATGAGGACCTGCAGGG-CGTTTGC-AC--TGAGTGCGCCGAGTGTGCCGAAT-GCGCCGCAAAGCAGCTACAGGATGCAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................AACAACAGCATCATGCCAC---AT....................................................................................................................2111.001100000
.....................................................................................................................................GCAGCAGCAGCAGCAGCAGCA..............................................................................................................................................................................................................................................21200.306000060
.........................................................................................................................................................................................................................ACAGC---------------------AGCAGCAACAACAAC......................................................................................................................................20200.051000001
...........................................................................................................................................GCAGCAGCAGCAGCAACAGCA........................................................................................................................................................................................................................................21200.051000010
...............................................................................................................................................................AGCAGC---AGCAGCAACAACAG---------CAGCAA------------------C................................................................................................................................................................................27200.051100000
......................................................................................................................................................AGCAACAGCAGCAGC---AGCAGC..........................................................................................................................................................................................................................21200.051001000
............................................................................................................................................................AGCAGCAGC---AGCAGCAACAACAG---------CA.......................................................................................................................................................................................................25200.051100000
............................................................................................................................................................AGCAGCAGC---AGCAGCAACAACAG---------CAGCA....................................................................................................................................................................................................28200.051010000
droGri2
GAATCCCCAGCAGCAACAGCCGGGCAT-C----------CAACAGGGTGCACTGGGACC---A---CGAG--------------------CGCCGCAACCCAATCAACTGCTTGGACATGCT---CAGCAGCAACAGCAACAACAACAACAGCAGCAGCAGCAAC---AACAGCAGCAGCAG---------CAACAG------------------CAGCAGC---------------------A------------------GCCCGGCAC---AT------------------CTCAGCAGCAG--------GGAGTACCCTCAGCGTCGCCTGTTAGCGGGACTGCTCCG---GCGCAGAATAGCATGTCCGAGGAGCGA-AAGAAACAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................GCAG---------CAACAG------------------CAGCAGC---------------------A------------------GCCCGGC...........................................................................................................................2511.00110
.................................................................................................................................................ACAACAGCAGCAGCAGCAAC---AACA............................................................................................................................................................................................................................24200.10220
..................................................................................................................................................CAACAGCAGCAGCAGCAAC---................................................................................................................................................................................................................................19200.10220
.............................................................................................................................................................GCAGCAAC---AACAGCAGCAGCAG---------CAACA....................................................................................................................................................................................................27200.05110
............................................................................................................................................................................GCAGCAGCAG---------CAACAG------------------CAGCAGC---------------------A------------------..................................................................................................................................24200.05110
..............................................................................................................................................................CAGCAAC---AACAGCAGCAGCA...................................................................................................................................................................................................................20200.05110
...................................................................................................................................................AACAGCAGCAGCAGCAAC---AAC.............................................................................................................................................................................................................................21200.05110
droAna3
GCGATTGCAGCAACAGCGGGCCGCCATGCTGGCCGCTCGCAACG----------GT------G---CCGG---CGGGCAGATTCCGCCTCCGCCCCCGCCC---------GTTGGCAGTGCC---CAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCA------------------------------------------------GCAGCAACAAC---------------------AATCGCATCAGCAACCTCATCATGGGAC---GA------------------TGCAGCAGCAGCCGTCGGAGGAGGACCTCCAGGG-GGTCTGC-AC--CGAGTGTGCCGAGTGCGCCGAGT-GTGCTGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................GGTCTGC-AC--CGAGTGTGCCGAGTGCGCC................................2811.001000001
.........................................................................................................................................................................................................................................................................TGGGAC---GA------------------TGCAGCAGCAGC......................................................................................2011.001000001
.....................................CGCAACG----------GT------G---CCGG---CGTC...........................................................................................................................................................................................................................................................................................................................1850.201000010
.................................................................................................................................................GCAGCAACAGCAACAGCA------------------------------------------------GCAGC................................................................................................................................................................................23200.153120000
...................................................................................................................................................AGCAACAGCAACAGCA------------------------------------------------GCAGC................................................................................................................................................................................21200.102010001
...........................................................................................................................................GCAGCAGCAGCAACAGCAACAGC......................................................................................................................................................................................................................................23200.102010001
............................................................................................................................................................AACAGCA------------------------------------------------GCAGCAACAAC---------------------A....................................................................................................................................................19200.051100000
............................................................................................................................................CAGCAGCAGCAACAGCAACAG.......................................................................................................................................................................................................................................21200.051000001
.................................................................................................................................AGCAGCAGCAGCAGCAGCAGCAAC...............................................................................................................................................................................................................................................24200.051010000
................................................................................................................................CAGCAGCAGCAGCAGCAGCAGCAAC...............................................................................................................................................................................................................................................25200.051010000
...............................................................................................................................GCAGCAGCAGCAGCAGCAGCA....................................................................................................................................................................................................................................................21200.051010000
......................................................................................................................................CAGCAGCAGCAGCAGCAACAGCAAC.........................................................................................................................................................................................................................................25200.051010000
.............................................................................................................................................AGCAGCAGCAACAGCAACAGCA------------------------------------------------GC...................................................................................................................................................................................24200.051001000
.................................................................................................................................................GCAGCAACAGCAACAGCA------------------------------------------------GCAGCAAC.............................................................................................................................................................................26200.051010000
....................................................................................................................................AGCAGCAGCAGCAGCAGCAACAGCAACA........................................................................................................................................................................................................................................28200.051010000
.......................................................................................................................................AGCAGCAGCAGCAGCAACAGC............................................................................................................................................................................................................................................21200.051000001
................................................................................................................................................AGCAGCAACAGCAACAGCA------------------------------------------------GC...................................................................................................................................................................................21200.051010000
............................................................................................................................................CAGCAGCAGCAACAGCAAC.........................................................................................................................................................................................................................................19200.051100000
....................................................................................................................................AGCAGCAGCAGCAGCAGCAACAGCA...........................................................................................................................................................................................................................................25200.051000001
......................................................................................................................................CAGCAGCAGCAGCAGCAACAG.............................................................................................................................................................................................................................................21200.051010000
droBip1
GCGGTTGCAGCAGCAGCGGGCTGCGATGCTGGCCGCTCGCAACA----------GT------G---CCGG---CGGACAGATACCTCCTCCGCCCCCGCCC---------GTTGGCAGTGCC---CAGCAGCAGCAGCAGCAACAGCA---------------------------------------------------------------GCAGCAACAAC---------------------AGGCGC---AGCAACCTCATCATGGGAC---GA------------------TGCAGCAGCAGCCGACGGAGGAGGACATCCAGGG-GGTCTGC-AC--CGAGTGTGCTGAGTGCGCCGAGT-GTGCTGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotal
No Reads
droKik1
GCGCCTCCAGCAGCAGCGCGCTGCCATGCTGGCCGCTCGCAATG----------GAGCCACCGCTACCAATGCTGGCCAGATACCGCCACCGCCACCGCCC---------GTAGGCACGGCC---CAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAAC---AGCAGCAGCAACAG---------CA---------------------TCAGCAAC---------------------AGTCGCATCAACAGCCGCATCATGGAGCTGCCA------------------TGCAGCAGCAGCAATCGGAAGAGGATCTGCAGGG-CGTGTGC-AC--AGAGTGTGCCGAGTGCGCCGAGT-GCGCGGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotal
No Reads
droFic1
GCGGCTGCAGCAGCAGCGTGCCGCGATGCTGGCTGCCCGCAACA----------CC------A---CAGG---CGGTCAGATACCGCCCCCGCCCCCTCCG---------GTTGGCAGTGCCGCCCAACAGCAGCAACAGCAGCAGCAACAGCAGCAACAGCAGC---AGCAG---CA---------------------------------GCAGCAGCAAC---------------------AGTCGCATCAGCAACCGCATCATGCGGC---ACTGCAGCAGCA---------GCAGCAGCAATCGGCGGAGGAGGAGCTGCAGGG-CGTCTGC-AC--CGAGTGTGCCGAGTGCGCCGAGT-GCGCGGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotal
No Reads
droEle1
GCGCCTGCAACAGCAACGTGCCGCGATGCTGGCCGCCCGAAATA----------CC------A---CAAGCGGTGGTCAGATACCACCTCCGCCCCCGCCC---------GTCGGCAGTGCC---CAGCAGCAGCAACAGCAGCAACAACAGCAGCAACAACAAC---AGCAGCAACAACAA---------CAACAGCA------------GCAGCAGCAAC---------------------AGCAACACCAGCAACCTCATCATGGAGC---AA------------------TGCAGCAGCAGCAATCGGAGGATGACCTGCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotal
No Reads
droRho1
GCGCCTGCAACAACAGCGCGCCGCGATGCTGGCCGCCCGCAACA----------CC------A---CCAG---CGGTCAGATACCGCCCCCGCCCCCGCCC---------GTCGGCAGTGCC---CAGCAGCAGCAGCAACAACAACAGCAACAGCAGCAGCAGC---AGCAACAGCAACAA---------CAACAGCAACAACAGCAGCAACAGCAGCCAC---------------------AGCCACACCAGCAACCTCATCATGAAGC---AC------------------TGCAGCAGCAGCAATCGGAGGAGGACCTGCAGGG-CGTCTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotal
No Reads
droBia1
GCGGCTGCAGCAGCAGCGCGCCGCCATGCTGGCCGCCCGCAACA----------CC------A---CGGG---CGGTCAGATACCGCCCCCGCCCCCGCCC---------GTCGGCACTGCC---CAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGC---AACAACAGCAGCAA---------CAACAGCAGCAGCAACAGCAGCAGCAGCAAC---------------------AGTCGCACCAGCAACCTCATCATGGAGCTGCAC------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTCCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotal
No Reads
droTak1
GCGCCTGCAGCAGCAGCGTGCCGCGATGTTGGCCGCCCGCAACA----------CC------A---CAAG---CGGTCAGATTCCGCCCCCGCCCCCGCCC---------GTCGGCAGTGCC---CAGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAACAACAGCAGCAGCAA---------CA------------------ACAGCAACAGC---------------------AGTCACACCAGCAACCTCATCACGGAGC---AA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTGCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotal
No Reads
droEug1
GCGTTTGCAACAACAGCGTGCCGCAATGTTGGCTGCCCGCAATA----------CC------A---CAGG---CGGTCAGATACCGCCTCCGCCTCCACCC---------GTCGGCAGTGCC---CAGCAGCAGCAGCAACAACAACAACAGCAACAGCAGCAAC---AACAACAACAGCAGCAACAGCAACAACAGCAGCAGCAGCAGCAACAGCAACAAC---------------------AGCCACATCAGCAACCTCATCATGGAGC---TA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTCCAGGG-CGTTTGC-AC--TGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotal
No Reads
dm3
GCGGCTGCAGCAGCAGCGTGCCGCAATGCTGGCCGCCCGCAACA----------CC------A---CAAG---CGGTCAGATACCGCCACCACCCCCGCCC---------GTTGGCACTGCC---CAGCAGCAGCAACAGCAACAGCAACAGCAGCAGCAGCAAC---AACAGCAACAA---------------------------------CAGCAGCAAC---------------------AGTCGCATCAGCAGCCGCATCATGGAGC---CA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTCCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAACAGCTCCAGGAAGCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................TCCAGGG-CGTTTGC-AC--CGAGTGTGCCGA.......................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................A------------------TGCAGCAGCAGCAGTCG.................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AA---------------------------------CAGCAGCAAC---------------------AGTCGCATCAGC.........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AGCCGCATCATGGAGC---CA------------------TGCA..............................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................A---------------------------------CAGCAGCAAC---------------------AGTCGCA..............................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................CAGCAACAA---------------------------------CAGCAGCAAC---------------------AGT..................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................CAACAA---------------------------------CAGCAGCAAC---------------------AGTCGC...............................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................AGTCGCATCAGCAGCCGCATCA...............................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CAGCAGCAGCAGCAAC---AACAGC..........................................................................................................................................................................................................................22200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
.........................................................................................................................C---CAGCAGCAGCAACAGCAACAGCAACA.................................................................................................................................................................................................................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................................................C---CAGCAGCAGCAACAGCA..........................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AGCAGCAGCAACAGCAACAGCA....................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AGCAGCAGCAACAGCAACA.......................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GCAGCAGCAACAGCAACAGCA....................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGCAGCAGCAAC---AACAGCAAC.......................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................ACAGCAGCAGCAGCAAC---AACAGCA.........................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
GCGGCTGCAGCAGCAGCGTGCCGCAATGCTGGCCGCCCGCAACA----------CC------A---CAGG---CGGTCAGATACCGCCCCCACCCCCGCCC---------GTTGGCACTGCT---CAGCAACAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAACAGCAGCAACAACAG---------CA------------------GCAGCAGCAAC---------------------AGTCGCATCAGCAGCCGCATCATGGAGC---CA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTCCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAACAGCTCCAGGAAGCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................ACAGCAGCAGCAGCAGCAACAGCAG...........................................................................................................................................................................................................................25201.3026000002600000000000
.................................................................................................................................AACAGCAGCAGCAACAGCAAC..................................................................................................................................................................................................................................................21200.05100000000000100000
..............................................................................................................................................ACAGCAACAGCAGCAGCA........................................................................................................................................................................................................................................18200.05100000000001000000
.......................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGTC..................................................................................15200.05100000000001000000
.................................................................................................................................AACAGCAGCAGCAACAGCA....................................................................................................................................................................................................................................................19200.05100000000000100000
....................................................................................................................................................................CAACAGCAGCAACAACAG---------C........................................................................................................................................................................................................19200.05100000000000100000
....................................................................................................................................................................CAACAGCAGCAACAACAG---------CA------------------GC...................................................................................................................................................................................22200.05100000000000100000
................................................................................................................................CAACAGCAGCAGCAACAGC.....................................................................................................................................................................................................................................................19200.05100000000001000000
.....................................................................................................................................................CAGCAGCAGCAGCAGCAACAGC.............................................................................................................................................................................................................................22200.05100100000000000000
droSec2
GCGGCTGCAGCAGCAGCGTGCCGCAATGCTGGCCGCCCGCAACA----------CC------A---CAAG---CGGTCAGATACCGCCCCCACCCCCGCCC---------GTTGGCACTGCT---CAGCAACAGCAGCAGCAACAGCAACAGCAGCAGCAGCAAC---AGCAGCAACAACAG---------CA------------------GCAGCAGCAAC---------------------AGTCGCATCAGCAGCCGCATCATGGAGC---CA------------------TGCAGCAGCAGCAGTCGGAGGAGGAACTCCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAAT-GTGCGGCCAAACAGCTCCAGGAAGCAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................................................................GAGGAACTCCAGGG-CGCC...........................................................1860.1710010
..........................................................................................................................................................................CAGCAACAACAG---------CA------------------GCAGCAG..............................................................................................................................................................................21200.1530003
...............................................................................................................................................................................................CA------------------GCAGCAGCAAC---------------------AGTCGC...............................................................................................................................................1970.1410100
................................................................................................................................................................................CAACAG---------CA------------------GCAGCAGCAAC---------------------AGT..................................................................................................................................................2270.1410010
...............................................................................................................................................................................ACAACAG---------CA------------------GCAGCAGCA............................................................................................................................................................................18200.1020020
.............................................................................................................................................................................CAACAACAG---------CA------------------GCAGCAGC.............................................................................................................................................................................19200.1020020
..................................................................................................................................ACAGCAGCAGCAACAGCAACAG................................................................................................................................................................................................................................................22120.0810010
...............................................................................................................................................CAGCAACAGCAGCAGCAGCAAC---AGCA............................................................................................................................................................................................................................26180.0610010
..................................................................................................................................................................AAC---AGCAGCAACAACAG---------CA------------------.....................................................................................................................................................................................19200.0510010
..................................................................................................................................................CAACAGCAGCAGCAGCAAC---AGC.............................................................................................................................................................................................................................22200.0510010
............................................................................................................................................CAACAGCAACAGCAGCAGC.........................................................................................................................................................................................................................................19200.0510010
.............................................................................................................................................AACAGCAACAGCAGCAGCAGC......................................................................................................................................................................................................................................21200.0510001
...............................................................................................................................................................AGCAAC---AGCAGCAACAACAG---------C........................................................................................................................................................................................................21200.0510010
..............................................................................................................................................ACAGCAACAGCAGCAGCAGCAAC---A...............................................................................................................................................................................................................................24200.0510010
..............................................................................................................................................................................AACAACAG---------CA------------------GCAGCAGC.............................................................................................................................................................................18200.0510010
...............................................................................................................................................................AGCAAC---AGCAGCAACAACAG---------CA------------------GC...................................................................................................................................................................................24200.0511000
...........................................................................................................................................................................AGCAACAACAG---------CA------------------GCAGCAG..............................................................................................................................................................................20200.0510010
...............................................................................................................................................................AGCAAC---AGCAGCAACAAC....................................................................................................................................................................................................................18200.0510010
...............................................................................................................................................................AGCAAC---AGCAGCAACAACAG---------.........................................................................................................................................................................................................20200.0511000
...................................................................................................................................................................AC---AGCAGCAACAACAG---------CA------------------GCA..................................................................................................................................................................................21200.0511000
...................................................................................................................................................AACAGCAGCAGCAGCAAC---AGCAGCA.........................................................................................................................................................................................................................25200.0510010
.........................................................................................................................................CAGCAACAGCAACAGCAGCAG..........................................................................................................................................................................................................................................21200.0510100
...........................................................................................................................................GCAACAGCAACAGCAGCAGCAGCA.....................................................................................................................................................................................................................................24200.0510001
..........................................................................................................................................................................CAGCAACAACAG---------CA------------------GCAGCAGCA............................................................................................................................................................................23200.0510010
droYak3
GCGGCTGCAGCAGCAGCGTGCCGCAATGCTGGCCGCCCGCAACA----------CC------A---CAGG---CGGTCAGATACCGCCCCCACCCCCGCCC---------GTTGGCACTGCT---CAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAACAGC---AGCAGCAGCAGCAA---------CAGCAGCAGCAACAGCAGCAGCAGCAGCAAC---------------------AGTCGCATCAGCAACCGCATCATGGAGC---CA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTCCAGGG-CGTTTGC-AC--CGAGTGTGCGGAGTGCGCCGAAT-GTGCGGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................CAACAACAGCAGCAGCA........................................................................................................................................................................................................................................17200.25500000000005
..........................................................................................................................................................GCAGCAACAGC---AGCAGCAGCAGCA...................................................................................................................................................................................................................24200.10202000000000
....................................................................................................................................................................................................GCAGCAACAGCAGCAGCAGCAGCA............................................................................................................................................................................24200.10202000000000
...............................................................................................................................................................................GCAGCAA---------CAGCAGCAGCAACAGCAGC......................................................................................................................................................................................26200.10202000000000
..........................................................................................................................................................GCAGCAACAGC---AGCAGCAGCAG.....................................................................................................................................................................................................................22200.10202000000000
...........................................................................................................................................GCAGCAACAACAGCAGCAGCAACAGC---AGC.............................................................................................................................................................................................................................29180.06100100000000
...................................................................................................................................CAGCAGCAGCAGCAACAACAGCAGC............................................................................................................................................................................................................................................25200.05100000000001
.........................................................................................................................T---CAGCAGCAGCAGCAGCAGCAAC.....................................................................................................................................................................................................................................................23200.05100000000001
..........................................................................................................................................AGCAGCAACAACAGCAGCAGCAACAGC---................................................................................................................................................................................................................................27200.05100100000000
.................................................................................................................................................................................AGCAA---------CAGCAGCAGCAACA...........................................................................................................................................................................................19200.05101000000000
................................................................................................................................................AACAACAGCAGCAGCAACAGC---................................................................................................................................................................................................................................21200.05100000010000
...........................................................................................................................................GCAGCAACAACAGCAGCAGCAACAGC---................................................................................................................................................................................................................................26200.05101000000000
droEre2
GCGGCTGCAGCAGCAGCGCGCCGCAATGCTGGCCGCCCGCAGTA----------CC------A---CAGG---CGGGCAGATACCGCCCCCGCCCCCGCCC---------GTCGGCAGTGCC---CAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAGC---AGCAGCAGCAA------------------------------------CAGCAAC---------------------AGTCGCATCAGCAACCGCATCATGGAGC---CA------------------TGCAGCAGCAGCAGTCGGAGGAGGACCTGCAGGG-CGTTTGC-AC--CGAGTGTGCCGAGTGCGCCGAGT-GTGCGGCCAAGCAGCTCCAGGAAGCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................GCAGCAGCAA------------------------------------CAGCAAC---------------------AGTCGC...............................................................................................................................................2311.0010001000
..............................................................................................................................................................................................................................................................................................................................................................................TGCGGCCAAGCAGCTCCAGGAAGCAG2611.0010000010
............................................................................................................................................................AGCAACAGC---AGCAGCAGCAA------------------------------------C................................................................................................................................................................................21200.0510100000
..............................................................................................................................................GCAGCAACAGCAGCAGCAACAGC---AGCAGC..........................................................................................................................................................................................................................29200.0510100000
.............................................................................................................................................................GCAACAGC---AGCAGCAGCAA------------------------------------CAGC.............................................................................................................................................................................23200.0511000000
..............................................................................................................................................................CAACAGC---AGCAGCAGCAA------------------------------------CAGC.............................................................................................................................................................................22200.0511000000
........................................................................................................................CC---CAGCAGCAGCAGCAGCAGC........................................................................................................................................................................................................................................................21200.0510100000

Generated: 05/18/2015 at 05:04 AM