ID:

dps_2576

 Coordinate:

XL_group1a:8128934-8129084 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.5

Flybase annnotation

exon [dpse_GLEANR_10688:3]; CDS [Dpse\GA22592-cds]; intron [Dpse\GA22592-in]

Repeatable elements

NameClassFamilyStrand
(CTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCGATGACACAGAAATGTGCATGGTAGTGTGTGCGAGTGCTACACATATTCATATGCGGTGCATGAATCATTGATAAAACAAATACTCTTGGAATGATGGGAGGTGTGAGGAGGGGAAAGCACTGGAAGGCAGCCATACGATCGCGTTGGAGTGACTCACCCGGCGAACGGCAGTGGTGATAAAGTGAGCAACAGCAGCAGCAGAGCAACAGAAACAACAGCAGCAGGAGAAGATTCGATACCAGGAGAAG
************************************************************************************************((((..(((((............))))).........)))).......((((((.(((...))))))))).************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902011
testis
 GSM343916
embryo
................................................................................................ATGGGAGGTGTGAGGAGGGG....................................................................................................................................... 20 0 1 12.00 12 7 4 1 0
.................................................................................................TGGGAGGTGTGAGGAGGGG....................................................................................................................................... 19 0 1 5.00 5 4 1 0 0
................................................................................................ATGGGAGGTGTGAGGAGGG........................................................................................................................................ 19 0 1 3.00 3 2 1 0 0
.................................................................................................TGGGAGGTGTGAGGAGGG........................................................................................................................................ 18 0 1 3.00 3 3 0 0 0
................................................................................................ATGGGAGGTGTGAGGAGGGGA...................................................................................................................................... 21 0 1 3.00 3 1 0 2 0
..................................................................................................GGGAGGTGTGAGGAGGGG....................................................................................................................................... 18 0 1 2.00 2 2 0 0 0
..................................................................................................................................................TTGGAGTGACTCACCCGGCGA.................................................................................... 21 0 1 2.00 2 2 0 0 0
...................................................................................................................................................TGGAGTGACTCACCCGGCGA.................................................................................... 20 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................AACGGCAGTGGTGATAAAGT................................................................. 20 0 1 1.00 1 1 0 0 0
...............................................................................................................................................GCGTTGGAGTGACTCACCCGG....................................................................................... 21 0 1 1.00 1 1 0 0 0
........................................................................................TTGGAATGATGGGAGGTGTGA.............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
...............TGTGCATGGTAGTGTGTGC......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
................................................................................AAATACTCTTGGAATGATGGG...................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................ACTCACCCGGCGAACGGCA.............................................................................. 19 0 1 1.00 1 1 0 0 0
........................................................................................................................................................TGACTCACCCGGCGAACGGCA.............................................................................. 21 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................................GTGAGCAACAGCAGCAGCAGAGC............................................ 23 0 1 1.00 1 0 0 0 1
.............................TGTGCGAGTGCTACACATATT......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
...............TGTGCATGGTAGTGTGTGCG........................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0
.......................................................................................................................................................GTGACTCACCCGGCGAACGGC............................................................................... 21 0 1 1.00 1 1 0 0 0
...............................................................................................................................AGGCAGCCATACGATCGCG......................................................................................................... 19 0 1 1.00 1 1 0 0 0
.........................................................................................................................ACTGGAAGGCAGCCATACGAT............................................................................................................. 21 0 1 1.00 1 1 0 0 0
.................................................................................................................................................GTTGGAGTGACTCACCCGGC...................................................................................... 20 0 1 1.00 1 1 0 0 0
..................................................................................................................................CAGCCATACGATCGCGTTGGA.................................................................................................... 21 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................TGATAAAGTGAGCAACAGCAG..................................................... 21 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................................CAGCAGCAGCAGAGCAACAG....................................... 20 0 2 0.50 1 1 0 0 0
................................................................................................ATGGGAGGAGTGAGGAGGGG....................................................................................................................................... 20 1 2 0.50 1 1 0 0 0
.........................................................................................TGGAATGTTGGGAGGTGTGGAG............................................................................................................................................ 22 3 2 0.50 1 0 0 0 1
.................................................................................................................................................................................................AGCAACAGCGGAGCAACAGAA..................................... 21 2 3 0.33 1 1 0 0 0
................................................................................................AAGGGAGGAGTGAGGAGGGGA...................................................................................................................................... 21 2 4 0.25 1 1 0 0 0
..............................................................................................TGGTGGGAGGTGTGATGAGGGT....................................................................................................................................... 22 3 5 0.20 1 0 0 0 1
.....................................................................................................................................................................GAACGGCCGTGGTGATGA.................................................................... 18 2 6 0.17 1 1 0 0 0
...........................................................................................GAATCATGGGAGGAGTGA.............................................................................................................................................. 18 2 6 0.17 1 1 0 0 0
.................................................................................................TGGGAGGTGTGAGGAGTT........................................................................................................................................ 18 2 9 0.11 1 1 0 0 0
.......................................................................................GTTGTAATGATGGGACGTG................................................................................................................................................. 19 3 13 0.08 1 1 0 0 0
................................................................................................................GGGTAGAGCACTGGATGGC........................................................................................................................ 19 3 14 0.07 1 1 0 0 0
..............................................................................................................................................CGCGCTGGAGGGAATCACC.......................................................................................... 19 3 15 0.07 1 1 0 0 0
......................................................................................TGTTGTAATGATGGGACGT.................................................................................................................................................. 19 3 15 0.07 1 1 0 0 0
................GTACATGGTGGTCTGTGCG........................................................................................................................................................................................................................ 19 3 19 0.05 1 0 0 0 1

Anti-sense strand reads

CGCTACTGTGTCTTTACACGTACCATCACACACGCTCACGATGTGTATAAGTATACGCCACGTACTTAGTAACTATTTTGTTTATGAGAACCTTACTACCCTCCACACTCCTCCCCTTTCGTGACCTTCCGTCGGTATGCTAGCGCAACCTCACTGAGTGGGCCGCTTGCCGTCACCACTATTTCACTCGTTGTCGTCGTCGTCTCGTTGTCTTTGTTGTCGTCGTCCTCTTCTAAGCTATGGTCCTCTTC
************************************************************************************((((..(((((............))))).........)))).......((((((.(((...))))))))).************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 SRR902010
ovaries
 GSM343916
embryo
 M059
embryo
.....................................................................................................................................................CTCACTGAGTGGGCCGCT.................................................................................... 18 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................GTATGCTAGCGCAACCTCACT................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................CCGCTTGCCGTCACCACTATT.................................................................... 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................GTTGTCGTCGTCCTCTTCTAA............... 21 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................GTCTTTGTTGTCGTCGTCCTC..................... 21 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................TCGTTGTCTTTGTTGTCGTC........................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................CCTTTCGTGACCTTCCGTCGGT................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................GTCTCGTTGTCTTTGTTGT............................... 19 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................................CGTCGTCCTCTTCTAAGTTAT.......... 21 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................TTGCCGTCACCACTATTTCAC................................................................ 21 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................................TCTTTGTTGTCGTCGTCCTC..................... 20 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................CGCTTGCCGTCACCACTATTT................................................................... 21 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................ACTGAGTGGGCCGCTTGCCGT.............................................................................. 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................GGCCGCTTGCCGTCACCACTA...................................................................... 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................CCGTCGGTATGCTAGCGCAA....................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...........................................................................................................CTCCTCCCCTTTCGTGACCTT........................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................GTCCTCTTCTAAGCTATGGTC...... 21 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................ATTTCACTCGTTGTCGTCGT................................................... 20 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................TCTCGTTGTCTTTGTTGT............................... 18 0 1 1.00 1 1 0 0 0 0
...............................ACGCTCACGATGTGTATAAGT....................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................GTTGTCGTCGTCCTCTTC.................. 18 0 5 0.80 4 4 0 0 0 0
.......................TGTCACACACGCTCACGATGT............................................................................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0 0
...........................................................................TTTTGTTTGTGAGGACCTGAC........................................................................................................................................................... 21 3 7 0.14 1 1 0 0 0 0
.......................................................................................................................................................................................................................GTTGTCGTCGTCCTCTT................... 17 0 9 0.11 1 0 0 1 0 0
..............................................................................TGTTTATGACAAACTTACAAC........................................................................................................................................................ 21 3 10 0.10 1 1 0 0 0 0
..................................................................................................................................................................................CTAGTTCACTCGTCGTCGTCA.................................................... 21 3 11 0.09 1 1 0 0 0 0
...................................................................................................CCGCCGCACTCTTCCCCTTT.................................................................................................................................... 20 3 18 0.06 1 0 0 0 1 0
...................................................................................................CCGCCTCACTCTTCCCCTTTC................................................................................................................................... 21 3 20 0.05 1 0 0 0 0 1
..............................................................................................................................................................................................................GTTGTCTTTGTTGACCTGGTC........................ 21 3 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1a:8128884-8129134 - dps_2576 GCGATGACACAGAAA--------TGTGCATGGTAGTGTGTGC--GAGTGCTACACATATTCATATGCG-------------------------------------------------------------------------------GTGCATGAATCATTGATAAAACAAATACTCTTGGAATGATGGGAGGTGTGAGGAGGGGAAAGC------------------------------ACTGGAA----------GGCAGCCATACG--------------------------A-------------------TCGCGTT---G---GAGTGACTCACCCGGCG-------AA----CGGCAGTGGTGATAA--AGTGAGCAACAGCAGCAGCAGAGCAACAGAAACAAC--AG---CAGC-AGGAG-AAGATTC-------------------------------------------------GATACC--AGGAGAAG-------
droPer2 scaffold_15:490542-490777 - GCGATGACACAGAAA--------TGTGCATGGTAGTGTGTGC--GAGTGCTACACATATTCATATGCG-------------------------------------------------------------------------------GTGCATGAATCATTGATAAAACAAATACTCTTGGAATGATGGGAGGTGTGAGGAGGGGAAAGC------------------------------ACTGGAA----------GGCAGCCATACG--------------------------A-------------------TCGCGTT---G---GAGTGACTCACCCGGCG-------AA----CGGCAGTGGTGATAA--AGTGAGCAACAGCAGCA-----------------GCACAG---CCGC-AGGAG-AAGATTC-------------------------------------------------GATACC--AGGAGAAG-------
droWil2 scf2_1100000004909:10949389-10949633 - TTGGTGGTATGAGTGTGTGT------CCATG--TGTATGTGAAAGTATGTTACACATCTC-------------------------------------------------------------------------------------ATATGCATGAATCATTGATAAAGATAA--------------AGATAAAGATAAAGATAAAAAGAC-----ATCAAAA--------------------TT----GAAGATGAGGGGAACGAACCG--------------------------ATCGAACTGGTTCGCCTTTAACACATT---A-----ATGACTCACCCGGCA-------AG----CAGCAGCGGCGACAC--CACCAACAACA-----------------------AA--AA---CAAC-ATGAA-AAGATTA-------------------------------------------------GATTAT--GATGGAAGAGAGCGA
droVir3 scaffold_12928:4988366-4988505 + GTGTGTGTGTG----------------------TGTGTATGT--GTGTGTTACACATCTTCATATACG-------------------------------------------------------------------------------CGGCATGAATCATTGATAAAATAAA-ACG---------AA---------------CATA---AAGCGG-----------C----AACG-----------GGGCCAACGAAAGCAGCCATACG--------------------------A-------------------TCGCGTC---A-----ATGACTCACAAAGCG-------AA----CG----------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6359:3485672-3485897 + AT------------------------------------GTGT--ATGTGTTACACATCTTCATATGCG-------------------------------------------------------------------------------GCGCATGAATCATTGATAAAATAAACACA-----------------------------------------------------------------TAAAGCGGCCAACGAAAGCAGCCATACG--------------------------A-------------------TCGCGTC---A-----ATGACTCACACAACG-------AA----CGCG----CAAAGCAATAACGATTTA------CA-----------------GTTAAGTGACATC-TTGA--AGGATTTGATTGGCTGACAGAATGGCAGATTGAATGGACTGACTGACCGACTATCTGCTACGCCAGGACAAC-------
droGri2 scaffold_14853:9687831-9688029 + GCGAGTGCATG----------------------TGTGTGTGT--GTGTGTTAAATATCTTCTTTTGCG-------------------------------------------------------------------------------GCGCATGAATCATTGATAAAATAAACACACACACACATAT---------ACACCCAAACACAC-----ATATATGCTCACA-------------TAAAAAAGCCGACGAAAGCAGCCATACG--------------------------A-------------------TCGCGTC---A-----ATGACTCACACAACACTCAACGAACGAAC----GCGCAAAGCA--AGCGATTAACGG-------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13117:2022587-2022770 + GCGACGAAA---AAG------------------TATCTGTGT--TAGTGTTACACATCTTCA---GCGG---------------------------CGACATACCTATAGGTATGT------------------------------TGAATATGAATCATTGATAAAACAAATACG---------AG---------------GGCA--GCAGCGG-----------C----GGCGGCACAACTGGAA----------AGCAGCCATACGAGTACGAAGACGAATATATGAATACGA-------------------TCGCG-----------ATGACTCACCCGCCG-------AA----------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396425:45416-45603 - GCGACGAAA---AAG------------------TATCTGTGT--TAGTGTTACACATCTTCA---GCGG---------------------------CGACATACCTATAGGTATGT------------------------------TGAATATGAATCATTGATAAAACAAATACG---------AG---------------GGCA--GCAGTGG-----------CGTATGGCGGCACAACTGGAA----------AGCAGCCATACGAATACGAAGACGAATATATGAATACGA-------------------TCGCG-----------ATGACTCACCCGCAG-------AA----------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302469:623121-623283 + GCGATGACACGAAAG--------------------------T--ATGTGTAACACATCTTTATAGGC------------------------------GGCATATATATATATATATATATATATATATATATGTATATATATGATGTGTGTATGAATCATTGATAAAACAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGCTGATCGTTGTGTGACTCACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454072:2595563-2595709 + GCGATGGCACG----------------------AAAATGTGT--GTGTGTTACACAGCTTTGTG-TCGACGAAT---------------------GCGGCATAA-----------------------------------------ATGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAAGCTATGCGAAAGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCCGAAA-------A-----CGGCA-------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491001:943457-943605 + GCGAACGCACGAAGG------------------TGTGTGTGT--AAGTGTTACACAGCTTTAAA-TCGGCGAAT---------------------GCGGCATATATATATGTATTC-----------------------------ATATACATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCCGCCA-------AA----------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779976:766142-766276 + GCGACCACACGAAAG----------------------TGTGT--GTGTGTTACACACCTTTAAA-TCGGCGAAT---------------------GCGGCATATATGTATTC---------------------------------ATATTCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----ATGACTCACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302069:309018-309178 + GCGACGGCACG----------------------AAGGTGTGT--GAGTGCTACACAGCTTTATAGGCGGCGAA---------------------------------------------------------------------------AACATGAATCATTGATAAAGCCAATGCG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCCAAAG-------CA----CGGG----G-----G---------AACCGAGGCA-----------------GCAGTG---CCAC-GG--G-GAAATCC---------------------------------GG----------------------------AG-------
droTak1 scf7180000415289:630746-630986 + GCGATGGCACGAAGGTGTGTGAGTGTGCGTG--TGTGTGTGT--TAGTGTTACACAGCTTTATAGGCGGCGAAAACGAAAAGCGAAAAACGAAAAACGGCA-AT-----------------------------------------ATATGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATGCGAT---C-----GTGACTCACCCAAAA-------AA----CAAA----A-----AATACCAA------GAAGCA-----------------GCAAAG---CGAC-GG--G-GAAATCC---------------------------------AAAAAGCCGAAGATAGGATACC--CTGGGA---------
droEug1 scf7180000409095:554021-554210 - GCGATGGCACGGCGGCATAT------------GAGCTTGTGT--GTGTGTTACACAGCTTTATAGGCGTCGAAA---------------------ACGGCATAT-----------------------------------------ATGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------GGCAGCCATACG--------------------------A-------------------ATTCGAT---C-----GTGACTCACCCAAAA-------AA----CAC----------------TAA------GAAACA-----------------GCAATG---CTAAAGG--GGGAATTCC----------------------------------AAAAGCCGAAGC--------------------------
dm3 chrX:5516006-5516114 - GCGATGGCACG----------------------TACATTTGT--GTG--------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAAGGCAGAC---GGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCTAAAA-------AG----CGGC--------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 x:5151155-5151248 - GCGATGGCACG----------------------TACATTT---------------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAAGGCAGGC---GGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_4:1241014-1241127 + GCGATGGCACG----------------------TACATTT---------------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAAGGCAGGC---GGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCCAAAA-------AA--AACGGC-------------------------------------------------------------GA--G-AAAGT--------------------------------------------------------------------------
droYak3 X:2953586-2953679 + GCGATGGCACA----------------------TATATTT---------------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCCAAAA-------AA----C-----------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4690:2867355-2867441 - GCGATGGCACA----------------------TATATTT---------------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCGATGACACAGAAA--------TGTGCATGGTAGTGTGTGC--GAGTGCTACACATATTCATATGCG-------------------------------------------------------------------------------GTGCATGAATCATTGATAAAACAAATACTCTTGGAATGATGGGAGGTGTGAGGAGGGGAAAGC------------------------------ACTGGAA----------GGCAGCCATACG--------------------------A-------------------TCGCGTT---G---GAGTGACTCACCCGGCG-------AA----CGGCAGTGGTGATAA--AGTGAGCAACAGCAGCAGCAGAGCAACAGAAACAAC--AG---CAGC-AGGAG-AAGATTC-------------------------------------------------GATACC--AGGAGAAG-------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................ATGGGAGGTGTGAGGAGGGG................................................................................................................................................................................................................................................................................................................20112.00120700004010
..........................................................................................................................................................................................TGGGAGGTGTGAGGAGGGG................................................................................................................................................................................................................................................................................................................1915.0050400001000
.........................................................................................................................................................................................ATGGGAGGTGTGAGGAGGG.................................................................................................................................................................................................................................................................................................................1913.0030200001000
..........................................................................................................................................................................................TGGGAGGTGTGAGGAGGG.................................................................................................................................................................................................................................................................................................................1813.0030300000000
.........................................................................................................................................................................................ATGGGAGGTGTGAGGAGGGGA...............................................................................................................................................................................................................................................................................................................2113.0030100000020
...........................................................................................................................................................................................GGGAGGTGTGAGGAGGGG................................................................................................................................................................................................................................................................................................................1812.0020200000000
................................................................................................................................................................................................................................................................................................................................TT---G---GAGTGACTCACCCGGCG-------A...........................................................................................................................................................2112.0020200000000
.................................................................................................................................................................................................................................................................................................................................T---G---GAGTGACTCACCCGGCG-------A...........................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................AA----CGGCAGTGGTGATAA--AGT..................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................GCGTT---G---GAGTGACTCACCCGG.....................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................TTGGAATGATGGGAGGTGTGA.......................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................TGTGCATGGTAGTGTGTGC--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................AAATACTCTTGGAATGATGGG...............................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................ACTCACCCGGCG-------AA----CGGCA.................................................................................................................................................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................................TGACTCACCCGGCG-------AA----CGGCA.................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................GTGAGCAACAGCAGCAGCAGAGC.............................................................................................................2311.0010000100000
.....................................TGTGC--GAGTGCTACACATATT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................TGTGCATGGTAGTGTGTGC--G................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................................................................GTGACTCACCCGGCG-------AA----CGGC..................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................A----------GGCAGCCATACG--------------------------A-------------------TCGCG.............................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................................ACTGGAA----------GGCAGCCATACG--------------------------A-------------------T.................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................................................................GTT---G---GAGTGACTCACCCGGC....................................................................................................................................................................2011.0010100000000
...................................................................................................................................................................................................................................................................CAGCCATACG--------------------------A-------------------TCGCGTT---G---GA..................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................TGATAA--AGTGAGCAACAGCAG......................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGAGCAACAG........................................................................................................2020.5010100000000
..........................................................................................................................................................................................TGGGAGGTGTGAGGAGTT.................................................................................................................................................................................................................................................................................................................1890.1110100000000
droPer2
GCGATGACACAGAAA--------TGTGCATGGTAGTGTGTGC--GAGTGCTACACATATTCATATGCG-------------------------------------------------------------------------------GTGCATGAATCATTGATAAAACAAATACTCTTGGAATGATGGGAGGTGTGAGGAGGGGAAAGC------------------------------ACTGGAA----------GGCAGCCATACG--------------------------A-------------------TCGCGTT---G---GAGTGACTCACCCGGCG-------AA----CGGCAGTGGTGATAA--AGTGAGCAACAGCAGCA-----------------GCACAG---CCGC-AGGAG-AAGATTC-------------------------------------------------GATACC--AGGAGAAG-------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................GAATGATGGGAGGTGTGAG......................................................................................................................................................................................................................................................................................................................1912.002000002
..........................................................................................................................................................................................TGGGAGGTGTGAGGAGGGG................................................................................................................................................................................................................................................................................................................1911.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................G-AAGATTC-------------------------------------------------GATACC--AGGAGAAG-------2211.001010000
..................................................................................................................................................................................................................................................................................................................................................................................ATAA--AGTGAGCAACAGCAGC.....................................................................................................................2011.001010000
.................................................................................................................................................................................................................................................................................................................................................................................GATAA--AGTGAGCAACAGCA.......................................................................................................................1911.001001000
..................................................................................................................................................................................................................................................................................................................................................ACCCGGCG-------AA----CGGCAGTGGTG...........................................................................................................................................2111.001010000
..................................................................................................................................................................................................................................................................GCAGCCATACG--------------------------A-------------------TCGCGTT---G---G...................................................................................................................................................................................2111.001010000
droWil2
TTGGTGGTATGAGTGTGTGT------CCATG--TGTATGTGAAAGTATGTTACACATCTC-------------------------------------------------------------------------------------ATATGCATGAATCATTGATAAAGATAA--------------AGATAAAGATAAAGATAAAAAGAC-----ATCAAAA--------------------TT----GAAGATGAGGGGAACGAACCG--------------------------ATCGAACTGGTTCGCCTTTAACACATT---A-----ATGACTCACCCGGCA-------AG----CAGCAGCGGCGACAC--CACCAACAACA-----------------------AA--AA---CAAC-ATGAA-AAGATTA-------------------------------------------------GATTAT--GATGGAAGAGAGCGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....TGGTATGAGTGTGTGT------CCATG--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.................................................................................................................................................................................................................................................................................................................................................CACCCGGCA-------AG----CAGCAGCGGC............................................................................................................................................2111.00100100
.........................................................................................................................................................................................................................CAAAA--------------------TT----GAAGATGAGGGGA........................................................................................................................................................................................................................................................2011.00100100
................GTGT------CCATG--TGTATGTGAAAGTAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.........................................................................................................................................................................................................................................................................................................................TAACACATT---A-----ATGACTCACCC.......................................................................................................................................................................2111.00101000
...........................................................................................................................................................................................................................AAA--------------------TT----GAAGATGAGGGGAA.......................................................................................................................................................................................................................................................1911.00101000
..............................................ATGTTACACATCTC-------------------------------------------------------------------------------------ATATGCAT....................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..........................................................................................................................................................................................................................AAAA--------------------TT----GAAGATGAGGGC.........................................................................................................................................................................................................................................................1820.50100010
droVir3
GTGTGTGTGTG----------------------TGTGTATGT--GTGTGTTACACATCTTCATATACG-------------------------------------------------------------------------------CGGCATGAATCATTGATAAAATAAA-ACG---------AA---------------CATA---AAGCGG-----------C----AACG-----------GGGCCAACGAAAGCAGCCATACG--------------------------A-------------------TCGCGTC---A-----ATGACTCACAAAGCG-------AA----CG----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................CG---------AA---------------CATA---AAGCGG-----------C----AACG-----------GGGC...................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................AAGCAGCCATACG--------------------------A-------------------TCGCGTC---........................................................................................................................................................................................2111.001000000000000000000000000000000000000000000010000000000000000000
...................................................................................................................................................................................................................................................................CAGCCATACG--------------------------A-------------------TCGCGTC---A-----ATGACC............................................................................................................................................................................2511.001010000000000000000000000000000000000000000000000000000000000000
GTGTGTGTGTG----------------------TGTGTATGT--GT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000001000000000000000000000000000000000000000000000000000000
droMoj3
AT------------------------------------GTGT--ATGTGTTACACATCTTCATATGCG-------------------------------------------------------------------------------GCGCATGAATCATTGATAAAATAAACACA-----------------------------------------------------------------TAAAGCGGCCAACGAAAGCAGCCATACG--------------------------A-------------------TCGCGTC---A-----ATGACTCACACAACG-------AA----CGCG----CAAAGCAATAACGATTTA------CA-----------------GTTAAGTGACATC-TTGA--AGGATTTGATTGGCTGACAGAATGGCAGATTGAATGGACTGACTGACCGACTATCTGCTACGCCAGGACAAC-------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................CAACGAAAGCAGCCATACG--------------------------A-------------------TCGCG.............................................................................................................................................................................................2511.001100000
droGri2
GCGAGTGCATG----------------------TGTGTGTGT--GTGTGTTAAATATCTTCTTTTGCG-------------------------------------------------------------------------------GCGCATGAATCATTGATAAAATAAACACACACACACATAT---------ACACCCAAACACAC-----ATATATGCTCACA-------------TAAAAAAGCCGACGAAAGCAGCCATACG--------------------------A-------------------TCGCGTC---A-----ATGACTCACACAACACTCAACGAACGAAC----GCGCAAAGCA--AGCGATTAACGG-------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................................................................................................................................................................CACACACACATAT---------ACACCCAA.................................................................................................................................................................................................................................................................................................................2122.00440
..............................................................................................................................................................................CACACACACATAT---------ACACCCA..................................................................................................................................................................................................................................................................................................................20100.20220
...............................................................................................................................................................................ACACACACATAT---------ACACCCA..................................................................................................................................................................................................................................................................................................................19110.09110
droAna3
GCGACGAAA---AAG------------------TATCTGTGT--TAGTGTTACACATCTTCA---GCGG---------------------------CGACATACCTATAGGTATGT------------------------------TGAATATGAATCATTGATAAAACAAATACG---------AG---------------GGCA--GCAGCGG-----------C----GGCGGCACAACTGGAA----------AGCAGCCATACGAGTACGAAGACGAATATATGAATACGA-------------------TCGCG-----------ATGACTCACCCGCCG-------AA----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................ATACGA-------------------TCGCG-----------ATGACTCACC........................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................ATACGAGTACGAAGACGAATATATGA...........................................................................................................................................................................................................................2611.001010000
............................................................................................................................................................................................................................................................................................ATATGAATACGA-------------------TCGCG-----------ATGA..............................................................................................................................................................................2111.001000010
.................................................................................................................................................................GATAAAACAAATACG---------AG---------------GGC................................................................................................................................................................................................................................................................................................................2011.001010000
......................................................................................................................................................................................................................................................................................................GA-------------------TCGCG-----------ATGACTCACCCGCC....................................................................................................................................................................2111.001010000
........................................................................................................................................................................................................................................................................ATACGAGTACGAAGACGAATATAT.............................................................................................................................................................................................................................2411.001010000
droBip1
GCGACGAAA---AAG------------------TATCTGTGT--TAGTGTTACACATCTTCA---GCGG---------------------------CGACATACCTATAGGTATGT------------------------------TGAATATGAATCATTGATAAAACAAATACG---------AG---------------GGCA--GCAGTGG-----------CGTATGGCGGCACAACTGGAA----------AGCAGCCATACGAATACGAAGACGAATATATGAATACGA-------------------TCGCG-----------ATGACTCACCCGCAG-------AA----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GCGATGACACGAAAG--------------------------T--ATGTGTAACACATCTTTATAGGC------------------------------GGCATATATATATATATATATATATATATATATATGTATATATATGATGTGTGTATGAATCATTGATAAAACAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGCTGATCGTTGTGTGACTCACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GCGATGGCACG----------------------AAAATGTGT--GTGTGTTACACAGCTTTGTG-TCGACGAAT---------------------GCGGCATAA-----------------------------------------ATGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAAGCTATGCGAAAGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCCGAAA-------A-----CGGCA-------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCGAACGCACGAAGG------------------TGTGTGTGT--AAGTGTTACACAGCTTTAAA-TCGGCGAAT---------------------GCGGCATATATATATGTATTC-----------------------------ATATACATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCCGCCA-------AA----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GCGACCACACGAAAG----------------------TGTGT--GTGTGTTACACACCTTTAAA-TCGGCGAAT---------------------GCGGCATATATGTATTC---------------------------------ATATTCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----ATGACTCACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GCGACGGCACG----------------------AAGGTGTGT--GAGTGCTACACAGCTTTATAGGCGGCGAA---------------------------------------------------------------------------AACATGAATCATTGATAAAGCCAATGCG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCCAAAG-------CA----CGGG----G-----G---------AACCGAGGCA-----------------GCAGTG---CCAC-GG--G-GAAATCC---------------------------------GG----------------------------AG-------SizeHit CountTotal NormTotal
No Reads
droTak1
GCGATGGCACGAAGGTGTGTGAGTGTGCGTG--TGTGTGTGT--TAGTGTTACACAGCTTTATAGGCGGCGAAAACGAAAAGCGAAAAACGAAAAACGGCA-AT-----------------------------------------ATATGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATGCGAT---C-----GTGACTCACCCAAAA-------AA----CAAA----A-----AATACCAA------GAAGCA-----------------GCAAAG---CGAC-GG--G-GAAATCC---------------------------------AAAAAGCCGAAGATAGGATACC--CTGGGA---------SizeHit CountTotal NormTotal
No Reads
droEug1
GCGATGGCACGGCGGCATAT------------GAGCTTGTGT--GTGTGTTACACAGCTTTATAGGCGTCGAAA---------------------ACGGCATAT-----------------------------------------ATGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------GGCAGCCATACG--------------------------A-------------------ATTCGAT---C-----GTGACTCACCCAAAA-------AA----CAC----------------TAA------GAAACA-----------------GCAATG---CTAAAGG--GGGAATTCC----------------------------------AAAAGCCGAAGC--------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GCGATGGCACG----------------------TACATTTGT--GTG--------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAAGGCAGAC---GGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCTAAAA-------AG----CGGC--------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................GCCATACG--------------------------A-------------------ATACGAT---C-----GTGAC.............................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................C-----GTGACTCACCTAAAA-------AG----CGG...................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................AT---C-----GTGACTCACCTAAAA-------AG----C.....................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
.....................................TTTGT--GTG--------------------------------------------------------------------------------------------------GTGTGCATGAATC...............................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................ACG-----------------------------------------------------------------CTGGAAGGCAGAC---GG..........................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................A-------------------ATACGAT---C-----GTGACTCACCTA......................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................AAGCAAATACG-----------------------------------------------------------------CTGGAAGGCAGAC---GGCA........................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
........ACG----------------------TACATTTGT--GTG--------------------------------------------------------------------------------------------------GTGTGC......................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................T---C-----GTGACTCACCTAAAA-------AG----CG....................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000
........................................................................................................................................................TGAATCATTGATAAAGCAAAT................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................GCCATACG--------------------------A-------------------ATACGAT---C-----G.................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AGGCAGAC---GGCAGCCATA..................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................ATACG-----------------------------------------------------------------CTGGAAGGCAGAC---GGC.........................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...ATGGCACG----------------------TACATTTGT--GTG--------------------------------------------------------------------------------------------------G...........................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................CG--------------------------A-------------------ATACGAT---C-----GTGACTCACC........................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................TTGT--GTG--------------------------------------------------------------------------------------------------GTGTGCATGAATCATTG...........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................ATACGAT---C-----GTGACTCACCTAAA....................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................AAATACG-----------------------------------------------------------------CTGGAAGGCAGAC---GGC.........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCACG----------------------TACATTTGT--GTG--------------------------------------------------------------------------------------------------GTGT........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTGT--GTG--------------------------------------------------------------------------------------------------GTGTGCATGAATC...............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................ATACG-----------------------------------------------------------------CTGGAAGGCAGAC---GG..........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................................................................................................................CAGCCATACG--------------------------A-------------------ATACGAT---C-----G.................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................................................................................................................................................................................................................................GCCATACG--------------------------A-------------------ATACGAT---C-----GTG...............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................................................................................................................................AGCAAATACG-----------------------------------------------------------------CTGGAAGG....................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CTGGAAGGCAGAC---GGCAGCCA....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................AGCCATACG--------------------------A-------------------ATACGAT---C-----GTG...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................ACG-----------------------------------------------------------------CTGGAAGGCAGAC---GGC.........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GGCAGCCATACG--------------------------A-------------------ATACG.............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................CG-----------------------------------------------------------------CTGGAAGGCAGAC---GGCAGCCATACG--------------------------......................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.........CG----------------------TACATTTGT--GTG--------------------------------------------------------------------------------------------------GTGTG.......................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................CAAATACG-----------------------------------------------------------------CTGGAAGGCAGAA---A...........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GTG--------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGC....................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GGCAGAC---GGCAGCCATACG--------------------------A-------------------ATAA..............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCAGCCATACG--------------------------A-------------------ATACGAT---C-----G.................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TACG--------------------------A-------------------ATACGAT---C-----GTGACTC...........................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TACG-----------------------------------------------------------------CTGGAAGGCAGAC---GGC.........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ACGAT---C-----GTGACTCACCTAAA....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........CG----------------------TACATTTGT--GTG--------------------------------------------------------------------------------------------------GTGTGCA.....................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................ATACG--------------------------A-------------------ATACGAT---C-----GTGACTC...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GCAAATACG-----------------------------------------------------------------CTGGAAGGCAGAC---GG..........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
......................................................................................................................................................................................................................................................AGGCAGAC---GGCAGCCATACG--------------------------A-------------------..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GCAAATACG-----------------------------------------------------------------CTGGAAGGC...................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................AATACG-----------------------------------------------------------------CTGGAAGGCAGAC---GGC.........................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TACGAT---C-----GTGACTCACCTAAA....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACC........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TACGAT---C-----GTGACTCACCTAA.....................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................ATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAAGGC...................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................TGGAAGGCAGAC---GGCAGC......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TACATTTGT--GTG--------------------------------------------------------------------------------------------------GTGTGCATG...................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACT............................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................C---GGCAGCCATACG--------------------------A-------------------ATACGA............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
droSim2
GCGATGGCACG----------------------TACATTT---------------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAAGGCAGGC---GGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................CAGCCATACG--------------------------A-------------------ATACGAT---C-----GT................................................................................................................................................................................2115.00541000000000000000
.......................................................................................................................................................................................................................................................................CATACG--------------------------A-------------------ATACGAT---C-----GTGACT............................................................................................................................................................................2113.00330000000000000000
...................................................................................................................................................................TAAAGCAAATACG-----------------------------------------------------------------CTGGAAGG....................................................................................................................................................................................................................................................................2112.00200000000002000000
.......................................................................................................................................................................................................................................................................................................A-------------------ATACGAT---C-----GTGACTCACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------2012.00200100001000000000
....................................................................................................................................................................................................................................................................AGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACT............................................................................................................................................................................2411.00100100000000000000
...........................................................................................................................................................ATCATTGATAAAGCAAATAC..............................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
..........................................................................................................................................................AATCATTGATAAAGCAAATAC..............................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
....................................................................................................................................................................AAAGCAAATACG-----------------------------------------------------------------CTGGAAGGC...................................................................................................................................................................................................................................................................2111.00100000000001000000
......................................TT---------------------------------------------------------------------------------------------------------GTGTGCATGAATCATTG...........................................................................................................................................................................................................................................................................................................................................................1911.00100000100000000000
.........CG----------------------TACATTT---------------------------------------------------------------------------------------------------------GTGTGCATGAATC...............................................................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
....................................................................................................................................................TGCATGAATCATTGATAAAGC....................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
..................................................................................................................................................TGTGCATGAATCATTGATAAA......................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
..........................................................................................................................................................................AATACG-----------------------------------------------------------------CTGGAAGGCAGGC---GG..........................................................................................................................................................................................................................................................2111.00100000000001000000
droSec2
GCGATGGCACG----------------------TACATTT---------------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAAGGCAGGC---GGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCCAAAA-------AA--AACGGC-------------------------------------------------------------GA--G-AAAGT--------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................A-------------------ATACGAT---C-----GTGACTCACCCA......................................................................................................................................................................2112.0021100
.CGATGGCACG----------------------TACATTT---------------------------------------------------------------------------------------------------------GTGT........................................................................................................................................................................................................................................................................................................................................................................2112.0020002
....................................................................................................................................................................AAAGCAAATACG-----------------------------------------------------------------CTGGAAGGC...................................................................................................................................................................................................................................................................2112.0020200
.......................................T---------------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATA........................................................................................................................................................................................................................................................................................................................................................2111.0010001
.................................TACATTT---------------------------------------------------------------------------------------------------------GTGTGCATGAATCA..............................................................................................................................................................................................................................................................................................................................................................2111.0011000
...............................................................................................................................................................TTGATAAAGCAAATACG-----------------------------------------------------------------CTGG........................................................................................................................................................................................................................................................................2111.0011000
......................................................................................................................................................................AGCAAATACG-----------------------------------------------------------------CTGGAAGGCAGG................................................................................................................................................................................................................................................................2211.0010100
...........................................................................................................................................................................ATACG-----------------------------------------------------------------CTGGAAGGCAGGC---GGCTTT......................................................................................................................................................................................................................................................2420.5011000
droYak3
GCGATGGCACA----------------------TATATTT---------------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCACCCAAAA-------AA----C-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................GAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CT..........................................................................................................................................................................................................................................................................2511.00101000000000
...................................................................................................................................................................................................................................................GGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GT................................................................................................................................................................................2711.00101000000000
droEre2
GCGATGGCACA----------------------TATATTT---------------------------------------------------------------------------------------------------------GTGTGCATGAATCATTGATAAAGCAAATACG-----------------------------------------------------------------CTGGAA----------AGCAGCCATACG--------------------------A-------------------ATACGAT---C-----GTGACTCATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 04:55 AM