ID:

dps_2575

 Coordinate:

XL_group1a:8067275-8067339 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.6 -7.4 -7.1

Flybase annnotation

CDS [Dpse\GA23081-cds]; CDS [Dpse\GA23081-cds]; exon [dpse_GLEANR_11591:4]; exon [dpse_GLEANR_11591:3]; intron [Dpse\GA23081-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------##################################################
ATACGATGTAGTTTTGTATGACTTTGAACCTGACCTGAAACGGGCCTGCCGTTCGTTGTGTATGCGAATATGGTCACTGCGTTCCACTAGATTTTCGAACGCTTGCTTCAGACAGTTGCATCCACAGAGCATGGCAATGACAACGAGATTGATGGTGATGACGAT
************************************************************..........(((.....((((((............)))))).....)))..***************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 V112
male body		 M040
female body
 M022
male body		 GSM444067
head
 M062
head
 SRR902012
CNS imaginal disc
 GSM343916
embryo
.....................................................................................................CTTGCTTCAGACAGTTGCATC........................................... 21 0 1 709.00 709 136 422 39 17 55 40 0 0
............................................................TATGCGAATATGGTCACTGCG.................................................................................... 21 0 1 350.00 350 184 93 48 2 18 5 0 0
............................................................TATGCGAATATGGTCACTGC..................................................................................... 20 0 1 180.00 180 58 87 18 5 9 3 0 0
.................................................................................TTCCACTAGATTTTCGAACG................................................................ 20 0 1 149.00 149 113 12 7 12 5 0 0 0
.................................................................................TTCCACTAGATTTTCGAAC................................................................. 19 0 1 121.00 121 32 0 0 87 1 1 0 0
............................................................TATGCGAATATGGTCACTG...................................................................................... 19 0 1 108.00 108 42 28 21 11 5 1 0 0
...............................................................................................................................................CGAGATTGATGGTGATGAC... 19 0 1 69.00 69 69 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCAT............................................ 20 0 1 65.00 65 43 17 0 0 5 0 0 0
...............................................................................................................................................CGAGATTGATGGTGATGACGA. 21 0 1 57.00 57 57 0 0 0 0 0 0 0
..........................................................TGTATGCGAATATGGTCACTG...................................................................................... 21 0 1 54.00 54 16 15 17 3 3 0 0 0
.................................................................................TTCCACTAGATTTTCGAACGC............................................................... 21 0 1 35.00 35 31 2 0 2 0 0 0 0
......................................................................................................TTGCTTCAGACAGTTGCATC........................................... 20 0 1 33.00 33 1 18 4 0 7 3 0 0
.......................................ACGGGCCTGCCGTTCGTTGTG......................................................................................................... 21 0 1 27.00 27 13 10 2 0 2 0 0 0
..........................................................................................................................CACAGAGCATGGCAATGAC........................ 19 0 1 18.00 18 3 11 0 0 2 2 0 0
...............................................................................................................................................CGAGATTGATGGTGATGACG.. 20 0 1 15.00 15 10 0 3 0 0 0 2 0
........................................................................................................................TCCACAGAGCATGGCAATGAC........................ 21 0 1 13.00 13 3 9 0 0 1 0 0 0
.....................................................................................................CGTGCTTCAGACAGTTGCATC........................................... 21 1 1 12.00 12 0 0 0 0 0 12 0 0
...........................................................GTATGCGAATATGGTCACTGC..................................................................................... 21 0 1 10.00 10 5 2 2 1 0 0 0 0
..........................................................................................................................CACAGAGCATGGCAATGACA....................... 20 0 1 10.00 10 2 7 0 0 1 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCATCC.......................................... 22 0 1 10.00 10 2 2 2 1 0 3 0 0
.................................................................................TTCCACTAGATTTTCGAACGCTTG............................................................ 24 0 1 9.00 9 6 2 0 1 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCATT........................................... 21 1 1 8.00 8 3 2 1 0 2 0 0 0
........................................................................................................................TCCACAGAGCATGGCAATGA......................... 20 0 1 7.00 7 3 4 0 0 0 0 0 0
.................................................................GAATATGGTCACTGCGTTCC................................................................................ 20 0 1 7.00 7 0 5 1 0 0 1 0 0
.........................................................GTTTATGCGAAGATGGTGA......................................................................................... 19 3 20 6.15 123 0 1 122 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCA............................................. 19 0 1 6.00 6 2 0 3 0 1 0 0 0
..............................................................................................................................................ACGAGATTGATGGTGATGAC... 20 0 1 6.00 6 6 0 0 0 0 0 0 0
.................................................................................TTCCACTAGATTTTCGAACGCT.............................................................. 22 0 1 6.00 6 3 1 0 2 0 0 0 0
............................................................TATGCGAATATGGTCACTGCGT................................................................................... 22 0 1 5.00 5 2 2 1 0 0 0 0 0
...........................................................................................TTTTCGAACGCTTGCTTCAGA..................................................... 21 0 1 5.00 5 5 0 0 0 0 0 0 0
..........................................................................................................................CACAGAGCATGGCAATGACAA...................... 21 0 1 5.00 5 1 4 0 0 0 0 0 0
............................................................TATGCGAATATGGTCACTGCGTC.................................................................................. 23 1 1 5.00 5 0 4 0 0 0 1 0 0
...............................................................................................................................................CGAGATTGATGGTGATGA.... 18 0 1 5.00 5 5 0 0 0 0 0 0 0
..........................................................TGTATGCGAATATGGTCACTGC..................................................................................... 22 0 1 4.00 4 3 1 0 0 0 0 0 0
......................................................................................................TTGCTTCAGACAGTTGCATCC.......................................... 21 0 1 4.00 4 2 0 1 0 1 0 0 0
...............................................................................................................................................CGAGATTGATGGTGATGACGT. 21 1 1 4.00 4 3 1 0 0 0 0 0 0
............................................................TATGCGAATATGGTCACTGCGTT.................................................................................. 23 0 1 4.00 4 2 2 0 0 0 0 0 0
.............................................................ATGCGAATATGGTCACTGCG.................................................................................... 20 0 1 4.00 4 0 1 3 0 0 0 0 0
............................................................TATGCGAATATGGTCACTGCGA................................................................................... 22 1 1 4.00 4 3 0 1 0 0 0 0 0
..................................................................................TCCACTAGATTTTCGAACGCT.............................................................. 21 0 1 4.00 4 2 2 0 0 0 0 0 0
....................................................................................CACTAGATTTTCGAACGCTTG............................................................ 21 0 1 4.00 4 4 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCATCA.......................................... 22 1 1 4.00 4 4 0 0 0 0 0 0 0
..............................................................................................................................................ACGAGATTGATGGTGATGACG.. 21 0 1 4.00 4 3 0 1 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCATCT.......................................... 22 1 1 4.00 4 1 1 0 0 2 0 0 0
...............................................................................................................................................CGAGATTGATGGTGATGAA... 19 1 1 3.00 3 3 0 0 0 0 0 0 0
............................................................TATGCGAATATGGTCACTCCG.................................................................................... 21 1 1 3.00 3 0 3 0 0 0 0 0 0
...............................................................GCGAATATGGTCACTGCGTTC................................................................................. 21 0 1 3.00 3 1 1 1 0 0 0 0 0
...........................................GCCTGCCGTTCGTTGTGTATG..................................................................................................... 21 0 1 3.00 3 0 3 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCAA............................................ 20 1 1 3.00 3 3 0 0 0 0 0 0 0
......................................................................................................TTGCTTCAGACAGTTGCATCCA......................................... 22 0 1 3.00 3 3 0 0 0 0 0 0 0
................................................................................GTTCCACTAGATTTTCGAACG................................................................ 21 0 1 3.00 3 2 0 0 0 1 0 0 0
.............................................................ATGCGAATATGGTCACTG...................................................................................... 18 0 1 3.00 3 0 0 3 0 0 0 0 0
.................................................................................TTCCACTAGATTTTCGAA.................................................................. 18 0 1 3.00 3 2 0 0 0 1 0 0 0
............................................................TATGCGAATATGGTCACTGCC.................................................................................... 21 1 1 3.00 3 0 1 1 0 0 1 0 0
.....................................................................................................................GCATCCACAGAGCATGGCAATG.......................... 22 0 1 3.00 3 1 1 0 0 0 1 0 0
......................................................................................................................CATCCACAGAGCATGGCAATG.......................... 21 0 1 3.00 3 0 3 0 0 0 0 0 0
.........................................................................................................................CCACAGAGCATGGCAATGAC........................ 20 0 1 3.00 3 1 2 0 0 0 0 0 0
............................................................TATGCGAATATGGACACTGCG.................................................................................... 21 1 1 2.00 2 1 0 0 0 0 1 0 0
...............................................................................................................................................CGAGATTGATGGTGATGACGAA 22 1 1 2.00 2 2 0 0 0 0 0 0 0
....................................................................................................GCTTGCTTCAGACAGTTGCATC........................................... 22 0 1 2.00 2 0 2 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGGTGCATC........................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0
.......................................ACGGGCCTACCGTTCGTTGTG......................................................................................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0
.................................................................................TTCCACTAGATTTTCGAACTTT.............................................................. 22 2 1 2.00 2 2 0 0 0 0 0 0 0
......................................................................................................................CATCCACAGAGCATGGCAATGAC........................ 23 0 1 2.00 2 0 1 0 0 1 0 0 0
.....................................AAACGGGCCTGCCGTTCGTTGC.......................................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0
.................................................................................TTCCACTAGATTTTCGAACGTT.............................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0
........................................CGGGCCTGCCGTTCGTTGTG......................................................................................................... 20 0 1 2.00 2 1 0 1 0 0 0 0 0
..................................................................................TCCACTAGATTTTCGAAC................................................................. 18 0 1 2.00 2 0 0 0 2 0 0 0 0
.......................................................................................................................ATCCACAGAGCATGGCAATGA......................... 21 0 1 2.00 2 0 2 0 0 0 0 0 0
.....................................................................................................CTTACTTCAGACAGTTGCATC........................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0
.........................................................................................................CTTCAGACAGTTGCATCCAC........................................ 20 0 1 2.00 2 0 0 0 0 1 1 0 0
............................................................TATGCGAATATGGGCACTGCG.................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................CCTGCTTCAGACAGTTGCATC........................................... 21 1 1 2.00 2 0 1 0 0 0 1 0 0
...........................................................GTATGCGAATATGGTCACTG...................................................................................... 20 0 1 2.00 2 1 0 1 0 0 0 0 0
.....................................................................................................CTTCCTTCAGACAGTTGCATC........................................... 21 1 1 2.00 2 0 2 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGCCAGTTGCATC........................................... 21 1 1 2.00 2 0 0 0 0 0 2 0 0
.................................................................................TTCCACTAGATTTTCGAACGCTTT............................................................ 24 1 1 2.00 2 2 0 0 0 0 0 0 0
..........................................................................................................................................GACAACGAGATTGATGGTGAT...... 21 0 1 2.00 2 2 0 0 0 0 0 0 0
.............................................................................................TTCGAACGCTTGCTTCAGAC.................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0
............................................................TATGCAAATATGGTCACTGC..................................................................................... 20 1 1 2.00 2 0 1 0 1 0 0 0 0
..................................................................................TCCACTAGATTTTCGAACGC............................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCCTC........................................... 21 1 1 2.00 2 1 1 0 0 0 0 0 0
...............................................................................................................................................CGAGATTGATAGTGATGACGA. 21 1 1 2.00 2 2 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCATA........................................... 21 1 1 2.00 2 0 1 0 0 1 0 0 0
.................................................................................TTCCACTAGATTTTCGAACGA............................................................... 21 1 1 2.00 2 1 0 1 0 0 0 0 0
........................................................................................................................................ATGACAACGAGATTGATGGTG........ 21 0 1 2.00 2 2 0 0 0 0 0 0 0
.......................................................................................................................ATCCACAGAGCATGGCAATG.......................... 20 0 1 2.00 2 0 1 1 0 0 0 0 0
............................................................TATGCGAATATGGTCACTGCGTTA................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................TATGCGAATATGTTCACTGCG.................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCACACAGTTGCAT............................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................CATCCTTCAGACAGTTGCATC........................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0
............................................................TATGCGAATATGGGCACTGC..................................................................................... 20 1 1 1.00 1 0 0 0 0 1 0 0 0
...............................................................................................................................................CGAGATTGATGGTGATGACC.. 20 1 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................CGAGATTGATGGTGATGAAA.. 20 2 1 1.00 1 1 0 0 0 0 0 0 0
.......................................ACGGGCCTGCCGTTCGTGGTG......................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................TGTATGCGAATATGTTCACTG...................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
........................................................................................................................TCCACAGAGCATGGCAATG.......................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................GCCTACCGTTCGTTGTGTATG..................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
............................................................TATGCGAATATGTTCACTGC..................................................................................... 20 1 1 1.00 1 0 0 0 1 0 0 0 0
...............................................................................................................................................CGAGATTGATGGTGATGAAAA. 21 2 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................................................................................GAGATTGATGGTGATGAC... 18 0 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................CTCGCTTCAGACAGTTGCATC........................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................................GACAACGAGATTGATGGTGAAA..... 22 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................................................TTTCGAACGCTTGCTTCAGAC.................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................CAAGATTGATGGTGATGACGA. 21 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCATACAGTTGCATC........................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................CGTGCTTCAGACAGATGCATC........................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0
..............................................................................................................................................ACGAGATTGATGGTGATGA.... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................ACGGGCCTGCCGTTCGTT............................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCATCCAC........................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................AGATTGATGGTGATGACGA. 19 0 1 1.00 1 0 0 0 1 0 0 0 0
.............................................................................................................................................AACGAGATTGATGGTGATGACGA. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................ACGGGCCTGCCGTTCGTTG........................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0 0
...........................................................GGATGCGAATATGGTCACTGC..................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCATCCT......................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0
...................................................................................................................TTGCATCCACAGAGCATGG............................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................AGATTGATGGTGATGACGAT 20 0 1 1.00 1 0 0 0 1 0 0 0 0
............................................................TATGCGAATATGGTCACTGTTT................................................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................TTGCTTCGGACAGTTGCATC........................................... 20 1 1 1.00 1 0 1 0 0 0 0 0 0
.......................................ACGGGCCTGCCGTTCGTTGT.......................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................ACAGAGCATGGCAATGACAAC..................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................................................CAACGAGATTGATGGTGATG..... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................GAATATGGTCACTGCGTTC................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0 0
......................................................................................CTAGATTTTCGAACGCTTG............................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................CGAGATTGATGGTGATAAC... 19 1 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................GAGATTGATGGTGATGACGA. 20 0 1 1.00 1 0 0 1 0 0 0 0 0
.......................................................................................................................ATACACAGAGCATGGCAATGAC........................ 22 1 1 1.00 1 0 0 0 0 0 1 0 0
.............................................................ATGCGAATATGGTCACTGCGT................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGAATC........................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................GCATCCACAGAGCATGGCAAT........................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0
............................................................TATGCGAATATTGTCACTGCG.................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................TTCCACTAGATTTTCGAACGCTC............................................................. 23 1 1 1.00 1 0 0 0 0 0 1 0 0
..........................................................................................................TTCAGACAGTTGCATCCA......................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................CTTGCTTAAGACAGATGCATC........................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0
...........................................................ATATGCGAATATGGTCACTG...................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................GGATCCACAGAGCATGGCAAT........................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0
..........................................................................................................................AACAGAGAATGGCACTGACAAC..................... 22 3 2 1.00 2 0 0 2 0 0 0 0 0
............................................................TATGCGGATATGGTCACTG...................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................TATGTGAATATGGTCACTGCG.................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................TTGTGTATGCGAATATGGTCT......................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................CACTAGATTTTCGAACGCTT............................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................................CACGGAGCATGGCAATGACAA...................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................GTTCCACTAGATTTTCGAAC................................................................. 20 0 1 1.00 1 0 0 0 1 0 0 0 0
...........................................................................................TTTTCGAACGCTTGCTTCAGACAG.................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................TTTGCTTCAGACAGTTGCATC........................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................................................AGATTGATGGTGATGA.... 16 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................GAAACAGACCTGCCGTTCG.............................................................................................................. 19 2 1 1.00 1 0 0 1 0 0 0 0 0
.......................................ACGGGCCTGCCGTTCGTTGTT......................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................TTCCACTAGATTTTCGAACGAC.............................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................................................GACAACGAGATTGATGGTGATG..... 22 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................CGTTCCACTAGATTTTCGAAC................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0
...............................................................................................................................................CGAGATTGATGGTGATG..... 17 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................TTCCACTAGATTTTCGAACGTA.............................................................. 22 2 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................TTCCACTAGATTTTCGAACGT............................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
............................................................TATGCGAATATGGTTACTG...................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................TTTTCGAACGCTTGCTTCAG...................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................CCGAGATTGATGGTGATGAA... 20 2 1 1.00 1 0 0 1 0 0 0 0 0
..........................................................................................................................CACAGAGCATGGCATTGAC........................ 19 1 1 1.00 1 0 0 0 0 1 0 0 0
.........................................................GTGTATGCGAATATGGTCACTG...................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0
...............................................................................................................................................CGAGATTGATGATGATGACGA. 21 1 1 1.00 1 1 0 0 0 0 0 0 0
................................................................CGAATATGGTCACTGCGTTCC................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................GTTCGTTGTGTATGCGAATATGGTC.......................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................................CGAGATTGATGGTGATGACGAT 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGATGCATC........................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCGTC........................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................................................ACGAGATTGATGGTGATGACGT. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................AATATGGTCACTGCG.................................................................................... 15 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................CAGTATGCGAATATGGTCACTGCG.................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................TTCCACTAGATTTTCGAACGCC.............................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................ACGAGATTGATGGTGAT...... 17 0 1 1.00 1 1 0 0 0 0 0 0 0
............................................................TATCCGAATATGGTCACTGCG.................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................CGAGATTGATGGGGATGAC... 19 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................CATGCTTCAGACAGTTGCATCCC......................................... 23 2 1 1.00 1 0 0 0 0 0 1 0 0
.....................................................................................................CGCGCTTCAGACAGTTGCATC........................................... 21 2 1 1.00 1 0 0 0 0 0 1 0 0
..............................................................TGCGAATATGGTCACTGCG.................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGC.............................................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................TTGCTTCAGACAGTTGCAT............................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................ACGGGCCTGCCGATCGTTGTG......................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0
.......................................ACGGGCCTACCGTTCGTTG........................................................................................................... 19 1 1 1.00 1 0 0 1 0 0 0 0 0
............................................................TATGCGAATTTGGTCACTGCG.................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0
...............................................................................CGTTCCACTAGATTTTCGAA.................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCTTC........................................... 21 1 1 1.00 1 0 0 0 0 1 0 0 0
.......................................ACGGGCCTGCCGTTCGTTGTGTTT...................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTACATCT.......................................... 22 2 1 1.00 1 0 0 0 0 1 0 0 0
...............................................................................................................................................CGAGATTGATGGTGATGACTT. 21 2 1 1.00 1 0 0 0 1 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTCCATC........................................... 21 1 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACAGTTGCAGC........................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................TTGTTTCAGACAGTTGCATC........................................... 20 1 1 1.00 1 0 0 0 0 0 1 0 0
...............................................................................................................................................CGAGATTGATGGAGATGAC... 19 1 1 1.00 1 1 0 0 0 0 0 0 0
........................................................TGTGTATGCGAATATGGTC.......................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................CCTGCCGTTCGTTGTGTATG..................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................CTTTCTTCAGACAGTTGCATC........................................... 21 1 1 1.00 1 0 0 0 0 0 1 0 0
.......................................ACGGGCCTGCCGTTCGTTGTGT........................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACACTTGCATC........................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................TGTATGCGAATATGGTCAC........................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0 0 0
............................................................TATGCGAATATGGTCACTGTT.................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0
............................................................TATGCGAATATGGCCCCTGCG.................................................................................... 21 2 1 1.00 1 0 0 0 0 1 0 0 0
.......................................................................................................TGCTTCAGACAGTTGCATCC.......................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................CTTGCTTCAGACCGTTCCCTC........................................... 21 3 2 0.50 1 0 1 0 0 0 0 0 0
.....................................................................................................CTGGCTTCAGAAAGTTGCATA........................................... 21 3 2 0.50 1 0 0 0 0 1 0 0 0
................................................................................AAGCCACTAGATTTTCGAACG................................................................ 21 3 3 0.33 1 0 0 0 0 1 0 0 0
.....................................................................................................CTTGCTTAAGCCCGTTGCATC........................................... 21 3 3 0.33 1 0 0 0 0 0 1 0 0
....................................GAAACAGACCTGCCGTTCGG............................................................................................................. 20 3 11 0.27 3 0 0 3 0 0 0 0 0
...........................................................................................................................................ATAACGAGATTGATGGTGC....... 19 2 4 0.25 1 0 0 1 0 0 0 0 0
...............................................................................................................................................CGCGATTGAAGGTGATGATGAT 22 3 5 0.20 1 0 0 1 0 0 0 0 0
.................................CCTGAAACGGCCCTGACG.................................................................................................................. 18 2 6 0.17 1 0 0 1 0 0 0 0 0
.............................................................................................................................................GCCGAGATTGATGGCGATGACG.. 22 3 7 0.14 1 0 0 1 0 0 0 0 0
.................................................................................TTCCACTAGATTTTCAAACTTT.............................................................. 22 3 7 0.14 1 1 0 0 0 0 0 0 0
............................................................TATGCGAATATGACCACGGC..................................................................................... 20 3 7 0.14 1 0 0 0 0 1 0 0 0
................................................................................................................................................GAGATTGATGGCGATGAA... 18 2 10 0.10 1 0 0 1 0 0 0 0 0
...............................................................................................................................................CGCGATTGAAGGTGATGATG.. 20 3 17 0.06 1 0 0 1 0 0 0 0 0
................................................................................................................................................GAGATTGATGTTGACGAGGA. 20 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

TATGCTACATCAAAACATACTGAAACTTGGACTGGACTTTGCCCGGACGGCAAGCAACACATACGCTTATACCAGTGACGCAAGGTGATCTAAAAGCTTGCGAACGAAGTCTGTCAACGTAGGTGTCTCGTACCGTTACTGTTGCTCTAACTACCACTACTGCTA
*****************************************************..........(((.....((((((............)))))).....)))..************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 M040
female body
 SRR902011
testis
 M022
male body
........................ACTTGGGCTGCACTTTGC........................................................................................................................... 18 2 2 0.50 1 1 0 0 0
........................ACTTGGGCTGCACTTTGCT.......................................................................................................................... 19 3 10 0.10 1 1 0 0 0
.........................................................CAAATACGCTTCTACCACT......................................................................................... 19 3 20 0.10 2 0 1 0 1
........................ACTTGGGCTGCACTTTGCCT......................................................................................................................... 20 3 11 0.09 1 0 0 1 0
........................ACTTGGGCTGCACTTTG............................................................................................................................ 17 2 12 0.08 1 1 0 0 0
.....................GGAACTCGGACTGGACGTT............................................................................................................................. 19 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1a:8067225-8067389 + dps_2575 ATACGATGTAGTTTTGTATGACTTTGAACCTGACCTGAAACGGGCCTGCCGTTCGTTGTGTATGCGAATATGGTCACTGCGTTCCACTAGATTTTCGAACGCTTGCTTCAGACAGTTGCATCCACAGAGCATGGCAATGACAACGAGATTGAT------------GGTGATGACGAT
droPer2 scaffold_15:425264-425428 + dpe_791 ATACGATGTAGTTTTGTATGACTTTGATCCTGACCTGAGACGGGCCTGTCGATCGTTGTGTATGCGAATGTGGTCACTGCGTTCCACTAGATTTTCGAACGCTTGCTTCAGACAGTTGCATCCACAGAGCATGGCAATGACAACGAGATTGAT------------GGTGATGACGAT
droVir3 scaffold_13049:3685223-3685278 + C-------------------------------------------------------------------------------------------------------------------------CGAAGAGCCGGCCACTGAAAATGACATTGATCTGGATAACACAGACGACGAGGAT
droEle1 scf7180000491347:6992-7026 + A----------------------------------------------------------------------------------------------------------------------------------TGGCAATGGCGATGATGATGAT------------GATGATGATGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ATACGATGTAGTTTTGTATGACTTTGAACCTGACCTGAAACGGGCCTGCCGTTCGTTGTGTATGCGAATATGGTCACTGCGTTCCACTAGATTTTCGAACGCTTGCTTCAGACAGTTGCATCCACAGAGCATGGCAATGACAACGAGATTGAT------------GGTGATGACGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................CTTGCTTCAGACAGTTGCATC.......................................................211709.00709173904005542201360
............................................................TATGCGAATATGGTCACTGCG................................................................................................211350.00350248050189301840
............................................................TATGCGAATATGGTCACTGC.................................................................................................201180.001805180309870580
.................................................................................TTCCACTAGATTTTCGAACG............................................................................201149.0014912700051201130
.................................................................................TTCCACTAGATTTTCGAAC.............................................................................191121.00121870010100320
............................................................TATGCGAATATGGTCACTG..................................................................................................191108.0010811210105280420
...............................................................................................................................................CGAGATTGAT------------GGTGATGAC...19169.006900000000690
.....................................................................................................CTTGCTTCAGACAGTTGCAT........................................................20165.0065000005170430
...............................................................................................................................................CGAGATTGAT------------GGTGATGACGA.21157.005700000000570
..........................................................TGTATGCGAATATGGTCACTG..................................................................................................21154.00543170003150160
.................................................................................TTCCACTAGATTTTCGAACGC...........................................................................21135.003520000020310
......................................................................................................TTGCTTCAGACAGTTGCATC.......................................................20133.003304030718010
.......................................ACGGGCCTGCCGTTCGTTGTG.....................................................................................................................21127.0027020002100130
..........................................................................................................................CACAGAGCATGGCAATGAC....................................19118.001800020211030
...............................................................................................................................................CGAGATTGAT------------GGTGATGACG..20115.001503000000102
........................................................................................................................TCCACAGAGCATGGCAATGAC....................................21113.00130000019030
...........................................................GTATGCGAATATGGTCACTGC.................................................................................................21110.00101200002050
..........................................................................................................................CACAGAGCATGGCAATGACA...................................20110.00100000017020
.....................................................................................................CTTGCTTCAGACAGTTGCATCC......................................................22110.00101203002020
.................................................................................TTCCACTAGATTTTCGAACGCTTG........................................................................2419.0091000002060
.....................................................................................................CTTGCTTCAGACAGTTGCATT.......................................................2118.0080100022030
........................................................................................................................TCCACAGAGCATGGCAATGA.....................................2017.0070000004030
.................................................................GAATATGGTCACTGCGTTCC............................................................................................2017.0070101005000
.....................................................................................................CTTGCTTCAGACAGTTGCA.........................................................1916.0060300010020
..............................................................................................................................................ACGAGATTGAT------------GGTGATGAC...2016.0060000000060
.................................................................................TTCCACTAGATTTTCGAACGCT..........................................................................2216.0062000001030
............................................................TATGCGAATATGGTCACTGCGT...............................................................................................2215.0050100002020
...........................................................................................TTTTCGAACGCTTGCTTCAGA.................................................................2115.0050000000050
..........................................................................................................................CACAGAGCATGGCAATGACAA..................................2115.0050000004010
............................................................TATGCGAATATGGTCACTGCGTC..............................................................................................2315.0050001004000
...............................................................................................................................................CGAGATTGAT------------GGTGATGA....1815.0050000000050
..........................................................TGTATGCGAATATGGTCACTGC.................................................................................................2214.0040000001030
......................................................................................................TTGCTTCAGACAGTTGCATCC......................................................2114.0040100010020
...............................................................................................................................................CGAGATTGAT------------GGTGATGACGT.2114.0040000001030
............................................................TATGCGAATATGGTCACTGCGTT..............................................................................................2314.0040000002020
.............................................................ATGCGAATATGGTCACTGCG................................................................................................2014.0040300001000
............................................................TATGCGAATATGGTCACTGCGA...............................................................................................2214.0040100000030
..................................................................................TCCACTAGATTTTCGAACGCT..........................................................................2114.0040000002020
....................................................................................CACTAGATTTTCGAACGCTTG........................................................................2114.0040000000040
.....................................................................................................CTTGCTTCAGACAGTTGCATCA......................................................2214.0040000000040
..............................................................................................................................................ACGAGATTGAT------------GGTGATGACG..2114.0040100000030
.....................................................................................................CTTGCTTCAGACAGTTGCATCT......................................................2214.0040000021010
...............................................................................................................................................CGAGATTGAT------------GGTGATGAA...1913.0030000000030
...............................................................GCGAATATGGTCACTGCGTTC.............................................................................................2113.0030100001010
...........................................GCCTGCCGTTCGTTGTGTATG.................................................................................................................2113.0030000003000
.....................................................................................................CTTGCTTCAGACAGTTGCAA........................................................2013.0030000000030
......................................................................................................TTGCTTCAGACAGTTGCATCCA.....................................................2213.0030000000030
................................................................................GTTCCACTAGATTTTCGAACG............................................................................2113.0030000010020
.............................................................ATGCGAATATGGTCACTG..................................................................................................1813.0030300000000
.................................................................................TTCCACTAGATTTTCGAA..............................................................................1813.0030000010020
............................................................TATGCGAATATGGTCACTGCC................................................................................................2113.0030101001000
.....................................................................................................................GCATCCACAGAGCATGGCAATG......................................2213.0030001001010
......................................................................................................................CATCCACAGAGCATGGCAATG......................................2113.0030000003000
.........................................................................................................................CCACAGAGCATGGCAATGAC....................................2013.0030000002010
...............................................................................................................................................CGAGATTGAT------------GGTGATGACGAA2212.0020000000020
....................................................................................................GCTTGCTTCAGACAGTTGCATC.......................................................2212.0020000002000
......................................................................................................................CATCCACAGAGCATGGCAATGAC....................................2312.0020000011000
.....................................AAACGGGCCTGCCGTTCGTTGC......................................................................................................................2212.0020000000020
........................................CGGGCCTGCCGTTCGTTGTG.....................................................................................................................2012.0020100000010
..................................................................................TCCACTAGATTTTCGAAC.............................................................................1812.0022000000000
.......................................................................................................................ATCCACAGAGCATGGCAATGA.....................................2112.0020000002000
.........................................................................................................CTTCAGACAGTTGCATCCAC....................................................2012.0020001010000
...........................................................GTATGCGAATATGGTCACTG..................................................................................................2012.0020100000010
.................................................................................TTCCACTAGATTTTCGAACGCTTT........................................................................2412.0020000000020
..........................................................................................................................................GACAACGAGATTGAT------------GGTGAT......2112.0020000000020
.............................................................................................TTCGAACGCTTGCTTCAGAC................................................................2012.0020000000020
..................................................................................TCCACTAGATTTTCGAACGC...........................................................................2012.0020000000020
.....................................................................................................CTTGCTTCAGACAGTTGCATA.......................................................2112.0020000011000
.................................................................................TTCCACTAGATTTTCGAACGA...........................................................................2112.0020100000010
........................................................................................................................................ATGACAACGAGATTGAT------------GGTG........2112.0020000000020
.......................................................................................................................ATCCACAGAGCATGGCAATG......................................2012.0020100001000
............................................................TATGCGAATATGGTCACTGCGTTA.............................................................................................2411.0010000000010
...............................................................................................................................................CGAGATTGAT------------GGTGATGACC..2011.0010000000010
...............................................................................................................................................CGAGATTGAT------------GGTGATGAAA..2011.0010000000010
........................................................................................................................TCCACAGAGCATGGCAATG......................................1911.0010000001000
................................................................................................................................................GAGATTGAT------------GGTGATGAC...1811.0010100000000
..........................................................................................................................................GACAACGAGATTGAT------------GGTGAAA.....2211.0010000000010
............................................................................................TTTCGAACGCTTGCTTCAGAC................................................................2111.0010000000010
..............................................................................................................................................ACGAGATTGAT------------GGTGATGA....1911.0010000000010
.......................................ACGGGCCTGCCGTTCGTT........................................................................................................................1811.0010000000010
.....................................................................................................CTTGCTTCAGACAGTTGCATCCAC....................................................2411.0010000000010
.................................................................................................................................................AGATTGAT------------GGTGATGACGA.1911.0011000000000
.............................................................................................................................................AACGAGATTGAT------------GGTGATGACGA.2311.0010000000010
.......................................ACGGGCCTGCCGTTCGTTG.......................................................................................................................1911.0010100000000
.....................................................................................................CTTGCTTCAGACAGTTGCATCCT.....................................................2311.0010100000000
...................................................................................................................TTGCATCCACAGAGCATGG...........................................1911.0010000001000
.................................................................................................................................................AGATTGAT------------GGTGATGACGAT2011.0011000000000
.......................................ACGGGCCTGCCGTTCGTTGT......................................................................................................................2011.0010000001000
...........................................................................................................................ACAGAGCATGGCAATGACAAC.................................2111.0010000001000
............................................................................................................................................CAACGAGATTGAT------------GGTGATG.....2011.0010000000010
.................................................................GAATATGGTCACTGCGTTC.............................................................................................1911.0010000010000
......................................................................................CTAGATTTTCGAACGCTTG........................................................................1911.0010000000010
................................................................................................................................................GAGATTGAT------------GGTGATGACGA.2011.0010100000000
.............................................................ATGCGAATATGGTCACTGCGT...............................................................................................2111.0010000001000
.....................................................................................................................GCATCCACAGAGCATGGCAAT.......................................2111.0010100000000
.................................................................................TTCCACTAGATTTTCGAACGCTC.........................................................................2311.0010001000000
..........................................................................................................TTCAGACAGTTGCATCCA.....................................................1811.0010100000000
.......................................................TTGTGTATGCGAATATGGTCT.....................................................................................................2111.0010000001000
....................................................................................CACTAGATTTTCGAACGCTT.........................................................................2011.0010000001000
................................................................................GTTCCACTAGATTTTCGAAC.............................................................................2011.0011000000000
...........................................................................................TTTTCGAACGCTTGCTTCAGACAG..............................................................2411.0010000000010
.................................................................................................................................................AGATTGAT------------GGTGATGA....1611.0010000000010
.......................................ACGGGCCTGCCGTTCGTTGTT.....................................................................................................................2111.0010000001000
.................................................................................TTCCACTAGATTTTCGAACGAC..........................................................................2211.0010000000010
..........................................................................................................................................GACAACGAGATTGAT------------GGTGATG.....2211.0010000000010
...............................................................................CGTTCCACTAGATTTTCGAAC.............................................................................2111.0011000000000
...............................................................................................................................................CGAGATTGAT------------GGTGATG.....1711.0010000000010
.................................................................................TTCCACTAGATTTTCGAACGTA..........................................................................2211.0010000000010
.................................................................................TTCCACTAGATTTTCGAACGT...........................................................................2111.0010000000010
...........................................................................................TTTTCGAACGCTTGCTTCAG..................................................................2011.0010000000010
.........................................................GTGTATGCGAATATGGTCACTG..................................................................................................2211.0010100000000
................................................................CGAATATGGTCACTGCGTTCC............................................................................................2111.0010000001000
..................................................GTTCGTTGTGTATGCGAATATGGTC......................................................................................................2511.0010000001000
...............................................................................................................................................CGAGATTGAT------------GGTGATGACGAT2211.0010000000010
..............................................................................................................................................ACGAGATTGAT------------GGTGATGACGT.2211.0010000000010
..................................................................AATATGGTCACTGCG................................................................................................1511.0010000000010
.................................................................................TTCCACTAGATTTTCGAACGCC..........................................................................2211.0010000000010
..............................................................................................................................................ACGAGATTGAT------------GGTGAT......1711.0010000000010
..............................................................TGCGAATATGGTCACTGCG................................................................................................1911.0010000000010
.....................................................................................................CTTGCTTCAGACAGTTGC..........................................................1811.0010000000010
......................................................................................................TTGCTTCAGACAGTTGCAT........................................................1911.0010000000010
...............................................................................CGTTCCACTAGATTTTCGAA..............................................................................2011.0010000001000
...............................................................................................................................................CGAGATTGAT------------GGTGATGACTT.2111.0011000000000
........................................................TGTGTATGCGAATATGGTC......................................................................................................1911.0010000001000
............................................CCTGCCGTTCGTTGTGTATG.................................................................................................................2011.0010100000000
.......................................ACGGGCCTGCCGTTCGTTGTGT....................................................................................................................2211.0010000000010
..........................................................TGTATGCGAATATGGTCAC....................................................................................................1911.0010100000000
............................................................TATGCGAATATGGTCACTGTT................................................................................................2111.0010000000010
.......................................................................................................TGCTTCAGACAGTTGCATCC......................................................2011.0010000000010
droPer2
ATACGATGTAGTTTTGTATGACTTTGATCCTGACCTGAGACGGGCCTGTCGATCGTTGTGTATGCGAATGTGGTCACTGCGTTCCACTAGATTTTCGAACGCTTGCTTCAGACAGTTGCATCCACAGAGCATGGCAATGACAACGAGATTGAT------------GGTGATGACGATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................TGTATGCGAATGTGGTCACTG..................................................................................................211293.0029301030289
..........................................................................................................................CACAGAGCATGGCAATGAC....................................191105.0010500030102
..........................................................................................................................CACAGAGCATGGCAATGACA...................................20186.00860000086
.....................................................................................................CTTGCTTCAGACAGTTGCATC.......................................................21185.008501010074
...........................................................GTATGCGAATGTGGTCACTG..................................................................................................20139.00390000039
..........................................................TGTATGCGAATGTGGTCACT...................................................................................................20136.00360100035
...........................................................GTATGCGAATGTGGTCACTGC.................................................................................................21129.00290000029
........................................................................................................................TCCACAGAGCATGGCAATGAC....................................21126.00260001025
............................................................TATGCGAATGTGGTCACTGC.................................................................................................20118.00180000018
....................................................................................................GCTTGCTTCAGACAGTTGCATC.......................................................22112.00120000012
............................................................TATGCGAATGTGGTCACTGCG................................................................................................21111.00110000011
............................................................TATGCGAATGTGGTCACTG..................................................................................................19111.0011020009
..........................................................TGTATGCGAATGTGGTCAC....................................................................................................19110.0010000109
..........................................................TGTATGCGAATGTGGTCACTGC.................................................................................................2219.009000009
.........................................................................................................................CCACAGAGCATGGCAATGAC....................................2018.008000008
........................................................................................................................TCCACAGAGCATGGCAATGA.....................................2018.008000008
.....................................................................................................CTTGCTTCAGACAGTTGCAT........................................................2017.007000106
......................................................................................................TTGCTTCAGACAGTTGCATC.......................................................2017.007000007
...............................................................................CGTTCCACTAGATTTTCGAA..............................................................................2016.006000006
..........................................................................................................................CACAGAGCATGGCAATGACAA..................................2115.005000005
.......................................................TTGTGTATGCGAATGTGGTC......................................................................................................2015.005000005
................................................................................GTTCCACTAGATTTTCGAACG............................................................................2114.004000004
.................................................................................TTCCACTAGATTTTCGAACG............................................................................2013.003000003
..........................................................TGTATGCGAATGTGGTCACTGT.................................................................................................2213.003000003
..........................................................................................................................CACAGAGCATGGCAATGA.....................................1813.003000102
........................................................................................................................TCCACAGAGCATGGCAATG......................................1913.003000003
..........................................................TGTATGCGAATGTGGTCA.....................................................................................................1813.003000003
...........................................................GTATGCGAATGTGGTCACT...................................................................................................1912.002000002
..........................................................TGTATGCGAATGTGGTCACG...................................................................................................2012.002000002
....................................................................................................GCTTGCTTCAGACAGTTGCAT........................................................2112.002000002
...............................................................................................................................................CGAGATTGAT------------GGTGATGACG..2012.002020000
..........................................................TGTATGCGAATGTGGTCACTGTC................................................................................................2312.002000002
.....................................................................................................................GCATCCACAGAGCATGGCAAT.......................................2112.002000101
............................................................................................................................CAGAGCATGGCAATGACAACG................................2112.002000002
.................................................................................TTCCACTAGATTTTCGAACGC...........................................................................2112.002000002
......................................................................................................................CATCCACAGAGCATGGCAAT.......................................2011.001000001
.....................................................................................................................GCATCCACAGAGCATGGCA.........................................1911.001000100
........................................................................................................................TCCACAGAGCATGGCAATGACAA..................................2311.001000001
......................................................................................................................CATCCACAGAGCATGGCAATG......................................2111.001000001
.....................................................................................................................GCATCCACAGAGCATGGCAATT......................................2211.001000001
..........................................................TGTATGCGAATGTGGTCACA...................................................................................................2021.002000002
...........................................................................................................................ACAGAGCATGGCAATGACA...................................1911.001000001
.....................................................................................................................GCATCCACAGAGCATGGCAATGA.....................................2311.001000001
..........................................................TGTATGCGAATGTGGTCACTT..................................................................................................2111.001000001
.................................................................................TTCCACTAGATTTTCGAACGG...........................................................................2111.001000001
...........................................................................................................................ACAGAGCATGGCAATGACAACGT...............................2311.001000001
...................................................................................................................TTGCATCCACAGAGCATGG...........................................1911.001000001
........................................................TGTGTATGCGAATGTGGTC......................................................................................................1911.001000001
.................................................................................TTCCACTAGATTTTCGAACGCTTG........................................................................2411.001000001
.....................................................................................................CTTGCTTCAGACAGTTGCA.........................................................1911.001010000
.....................................................................................................................GCATCCACAGAGCATGGCAATG......................................2211.001000001
.......................................................TTGTGTATGCGAATGTGGTCAC....................................................................................................2211.001000001
........................................................................................................................TCCACAGAGCATGGCAATGAG....................................2111.001000001
.......................................................................................................................ATCCACAGAGCATGGCAATGAC....................................2211.001000001
.........................................................GTGTATGCGAATGTGGTCACTG..................................................................................................2211.001000001
.........................................................GTGTATGCGAATGTGGTCAC....................................................................................................2011.001000001
..........................................................TGTATGCGAATGTGGTCACTC..................................................................................................2111.001000001
...............................................................................CGTTCCACTAGATTTTCGAAC.............................................................................2111.001000001
.................................................................................TTCCACTAGATTTTCGAAC.............................................................................1911.001100000
..........................................................................................................................CACAGAGCATGGCAATGACATT.................................2230.672000002
..........................................................................................................................CACAGAGCATGGCAATGACAT..................................2120.501000001
..........................................................TGTATGCGAATGTGGTCCT....................................................................................................1950.201000001
droVir3
C-------------------------------------------------------------------------------------------------------------------------CGAAGAGCCGGCCACTGAAAATGACATTGATCTGGATAACACAGACGACGAGGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................TGACATTGATCTGGATAACACAGACG........2614.004000010000000000000000001010000000000001000000000000000000000000
.........................................................................................................................................TGAAAATGACATTGATCTGGATAACACA............2812.002001000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................GCCACTGAAAATGACATTGATCTGGA...................2611.001000000000000000000000000001000000000000000000000000000000000000
................................................................................................................................................GACATTGATCTGGATAACAC.............2011.001000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................TTGATCTGGATAACACAGACGACGAGGA.2811.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TAACACAGACGACGAGGAT1911.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................AAATGACATTGATCTGGATAACA..............2311.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................TCTGGATAACACAGACGACGAGGAT2511.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GGCCACTGAAAATGACATTGATCTGGAT..................2811.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................GGCCACTGAAAATGACATTGATCTGGA...................2711.001000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................ACTGAAAATGACATTGAT........................1811.001000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................TGAAAATGACATTGATCTGGATAACAC.............2711.001000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................CTGAAAATGACATTGATCTGGAT..................2311.001000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................AACACAGACGACGAGGAT1811.001000000000100000000000000000000000000000000000000000000000000000
droEle1
A----------------------------------------------------------------------------------------------------------------------------------TGGCAATGGCGATGATGATGAT------------GATGATGATGATSizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 04:55 AM