ID:

dps_2557

 Coordinate:

XL_group1a:7011100-7011387 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.2 -17.9 -17.4

Flybase annnotation

CDS [Dpse\GA20028-cds]; exon [dpse_GLEANR_11539:1]; exon [dpse_GLEANR_11539:2]; CDS [Dpse\GA20028-cds]; intron [Dpse\GA20028-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTCTGTCACGCGTTAGCGAACTCCCACTTATTGTTAAGCAATTGCAAAAAGTACGTAATCCTGTCACTAACCCCAGCGTTGTTATCACTAATCTCGAGCAAAAGCAAACACTACAAAAACAACAACAGCAGCAACAACAATACCAAAAACACACAACAAAGAAATGCATTAGCACAAGTGGCGGCAACAACAGCAATCACTGGACAGTGCGGCTGCAACATCATAATCATCATCATCGACAGCGGCAGCAGCAGCAGCAGCAACGGCAGCATCATCATCAACAGCTAAGCCTAAACATCTGTCGAGGTTATTCATCATCATTTTTCGGTCTATTCCAGAATGCAGCACAGGCTGGCGTGGCCAAAACCAACAACTATGCCACGGAGGC
****************************************************************************************************************************************************************************************************.....((...(((..(((((.........................((.((.((....)).)).))....)))))..)))..............))..*********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M062
head
 GSM444067
head
 GSM343916
embryo
 M059
embryo
 V112
male body
............................................................................................................................................................................................................................................................................................................................................................................AACCAACAACTATGCCACGGAGG. 23 0 1 2.00 2 1 0 1 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................GCAGCACAGGCTGGCGTGGCCAAAACCA................... 28 0 1 2.00 2 2 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GCACAGGCTGGCGTGGCCAA........................ 20 0 1 2.00 2 1 0 1 0 0 0
........................................................................................................................................................................................................................................................................................................................................................GCACAGGCTGGCGTGGCCA......................... 19 0 1 2.00 2 2 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................TGCAGCACAGGCTGGCGTGGCC.......................... 22 0 1 2.00 2 1 1 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................AATGCAGCACAGGCTGGCGTGGCCAAA....................... 27 0 1 2.00 2 1 0 0 0 0 1
.................................................................................................................................................................................................................................................................................ATCATCAACAGCTAAGCCTA............................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................AATGCAGCACAGGCTGGCGTGGCCAA........................ 26 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................ATGCAGCACAGGCTGGCGTGGCCAAA....................... 26 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................AAAATGCAGCACAGGCTGGCGTGGCCA......................... 27 1 1 1.00 1 1 0 0 0 0 0
.................GAACTCCCACTTATTGTTAAGCA............................................................................................................................................................................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0
..................................................................................................................................................................................................................................................................................................................................................AATGCAGCACAGGCTGGCGTGGCC.......................... 24 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................AACAACTATGCCACGGAG.. 18 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................CAGGCTGGCGTGGCCAAAACC.................... 21 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................TCACTGGACAGTGCGGCTGC............................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................ACAGGCTGGCGTGGCCAAAACCAAC................. 25 0 1 1.00 1 0 1 0 0 0 0
CTCTGTCACGCGTTAGCGAA................................................................................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................AAGAAATGCATTAGCACAAGTGGC.............................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0
............................................................................................................................................................................................................................................................................................................................ATCCTTTTTCGGTCTATTCCACT................................................. 23 3 1 1.00 1 0 0 0 1 0 0
...................................................................................................................................................................................................................................................................................................................................................ATGCAGCACAGGCTGGCGTGGC........................... 22 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................GCAGCACAGGCTGGCGTGG............................ 19 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................................TGCAGCACAGGCTGGCGTGGCCAAAACC.................... 28 0 1 1.00 1 0 1 0 0 0 0
........CGCGTTAGCGAACTCCCACT........................................................................................................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................AATGCAGCACAGGCTGGCGTGGCCA......................... 25 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................................CAGCACAGGCTGGCGTGGCCAAA....................... 23 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................................AAAAAATGCAGCACAGGCTGGCGTGGCC.......................... 28 3 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................................................AAGCCTAAGCATCTGTCGAGG................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................ATGCAGCACAGGCTGGCGTGGCCAAAA...................... 27 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................AACAGCTAAGCCTAAACATCTGTCGAG.................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
..............................................................................TTGTTATCACTAATCTCGAGC................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................CGGTCTATTCCAGAATGCAGC.......................................... 21 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................CAACAATTATGCCACGGAAGC 21 2 1 1.00 1 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................................................................................................................................CAAAACCAACAACTATGCCACGGAGG. 26 0 1 1.00 1 0 0 0 0 1 0
....GTCACGCGTTAGCGAACTCCCACT........................................................................................................................................................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................................................................................................................................................................................................................................................AACAACTATGCCACGGAGGC 20 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................................CACAGGCTGGCGTGGCCAAAACCA................... 24 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................................AGGTAGCACAGGCTGGCGTGGCCAAAACC.................... 29 2 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................AGAATGCAGCACAGGCTGGC................................ 20 0 1 1.00 1 1 0 0 0 0 0
...............GCGAACTCCCACTTATTGTTAAGCA............................................................................................................................................................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................................AAAACCAACAACTATGCCACGGAGG. 25 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................................AAAATGCAGCACAGGCTGGCGT.............................. 22 1 1 1.00 1 0 0 0 0 1 0
...TGGCACGCGTTATCGAAC............................................................................................................................................................................................................................................................................................................................................................................... 18 2 5 0.40 2 2 0 0 0 0 0
.AATGTCACGCGTTATCGAAC............................................................................................................................................................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 1
.....GCACGCGTTATCGAACTCA............................................................................................................................................................................................................................................................................................................................................................................ 19 3 7 0.14 1 1 0 0 0 0 0
........................................................................................................................................................................................................................................................CAGCAGCAGCAGCAACGGCAGC...................................................................................................................... 22 0 12 0.08 1 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................................................................AATATCTGTAGAAGTTATTCA.......................................................................... 21 3 13 0.08 1 0 0 0 1 0 0
..................................................................................................................AAAAACAACAACATCAGCAACA............................................................................................................................................................................................................................................................ 22 1 16 0.06 1 0 1 0 0 0 0
...............................................................................................................................................................................................................................................CAGCGGCAGCAGCAGCAGCA................................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................CCTCATTTTTGTGTCTATTC..................................................... 20 3 20 0.05 1 0 0 0 1 0 0
................................................................................................................................................................................................................................................AGCGGCAGCAGCAGCAGCA................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................GCAAAGGTAGCATAATCAT.............................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0
.....................................................................................................................AACAACAACAGCAGCAACAAC.......................................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1 0
..........................................................................................................................................................................................................................................................GCAGCAGCAGCAACGGCCG....................................................................................................................... 19 1 20 0.05 1 0 0 0 0 1 0
.........................................................................................................................................................................................................................................................AGCAGCAGCAGCAACGGCA........................................................................................................................ 19 0 20 0.05 1 0 0 0 1 0 0
......................................................................................................................ACAACAACAGCAGCAACAACA......................................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

GAGACAGTGCGCAATCGCTTGAGGGTGAATAACAATTCGTTAACGTTTTTCATGCATTAGGACAGTGATTGGGGTCGCAACAATAGTGATTAGAGCTCGTTTTCGTTTGTGATGTTTTTGTTGTTGTCGTCGTTGTTGTTATGGTTTTTGTGTGTTGTTTCTTTACGTAATCGTGTTCACCGCCGTTGTTGTCGTTAGTGACCTGTCACGCCGACGTTGTAGTATTAGTAGTAGTAGCTGTCGCCGTCGTCGTCGTCGTCGTTGCCGTCGTAGTAGTAGTTGTCGATTCGGATTTGTAGACAGCTCCAATAAGTAGTAGTAAAAAGCCAGATAAGGTCTTACGTCGTGTCCGACCGCACCGGTTTTGGTTGTTGATACGGTGCCTCCG
***********************************************************************************************.....((...(((..(((((.........................((.((.((....)).)).))....)))))..)))..............))..**************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM444067
head
 GSM343916
embryo
 SRR902012
CNS imaginal disc
 SRR902011
testis
.........................................................................................................................................................................................................................................................................................................AGAGGGCTCCAATGAGTAG........................................................................ 19 3 20 3.60 72 65 7 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................................................GGTGATACGATGCCTCCG 18 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................TCGATTAAGCTTTGTAGACAG..................................................................................... 21 3 2 2.00 4 3 1 0 0 0 0
.................................................................................................................................................................................CACCGCCGTTGTTGTCGTTA............................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................TGTGTTGTTTCTTTACGTAAT......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................CGTAATCGTGTTCACCGCCGT.......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................................................................................................GAGGGCTCCAATGAGTAG........................................................................ 18 3 20 1.00 20 20 0 0 0 0 0
............................................................................................................................................................................................................................................................................CGTAGTAGTAGTTGTCGATT.................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................CTGTCACGCCGACGTTGTA....................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................TTTTCGTTTGTGATGTTTTTG............................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................CGGATTCGTAGACAGCTCCA................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................................................TGGTGATACGATGCCTCCG 19 2 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................CCGTTGTTGTCGTTAGTGAC.......................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................GTTTTCGTTTGTGATGTTTT.............................................................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................TTGTTGTCGTTAGTGACCTGT...................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................................................AGTACTAAAAAGACAGATAAGT.................................................... 22 3 1 1.00 1 0 0 0 1 0 0
........................................................................................................................................................................................................................................................................................................................................AGATAAGGTCTTACGTCGT......................................... 19 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................GTTTGTGATGTTTTTGTTGT........................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
...ACCGTGCGCAATAGCTTG............................................................................................................................................................................................................................................................................................................................................................................... 18 2 5 0.80 4 4 0 0 0 0 0
...................................................................................................................................................................................................................................................................................GTAGTAGTCGAGTCGGATTCG............................................................................................ 21 3 7 0.57 4 3 0 1 0 0 0
..................................................................................................................................................................................................................................................................................GGTAGTAGTCGAGTCGGATT.............................................................................................. 20 3 8 0.38 3 2 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................CTCGATTCGGATTTCTTGACA...................................................................................... 21 3 3 0.33 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................GTAGTAGTAGTTGTTAATTC................................................................................................... 20 2 5 0.20 1 0 0 0 0 1 0
...................................................................................................................TTTTGTTGTTGTCGTCGTT.............................................................................................................................................................................................................................................................. 19 0 8 0.13 1 0 1 0 0 0 0
..GACCGTGCGCAATAGCTTGT.............................................................................................................................................................................................................................................................................................................................................................................. 20 3 9 0.11 1 1 0 0 0 0 0
.............................................................................TAACAATGGTGATTAGAGTT................................................................................................................................................................................................................................................................................................... 20 3 11 0.09 1 0 0 1 0 0 0
.......................................................................................................................................CTGTTATGGTTTGTGTGTGT......................................................................................................................................................................................................................................... 20 2 13 0.08 1 0 0 0 0 0 1
...................................................................................................................................................................................................................................................................................GTAGTAGTCGAGTCGGATTC............................................................................................. 20 3 15 0.07 1 0 1 0 0 0 0
.................................................................................................................................................................................CACCGCCGTAGATGTCGTTT............................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1a:7011050-7011437 + dps_2557 CTCTGTCACGCGTTAGCGAACTCCCACTTATTGTTAAGCAATTGCAAAAAGTACGTAATCCT---------G------TCACTAACCCCAGC--------------------------------------------GTTGTTAT---------------CACTAATCTCGAGCAAAAGCAAACAC-------------------------TA----CAAAAACAACAACAGCAGCAACAACAATACCAAAAACACACAACAAAGAAATGCATTAGCAC-AAGTG---------------------------------------------------------------------------------------------------GCG------GCAACA---------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAATCACTGGACAGTGCGGCTGCAACATCATAATCATCATCATCGACAGCGGCAGCAGCAG---------------CAGCAGCAACGGCAGCAT---------------CATCATCAACAGCTAAGCCTAAACATCTGTC-------GAGGTTATTCATCATCATTTTTCGGTCTATTCCAGAATGC------AGCACAGGCTGGCGTGGCCAAAACC---------AACAACTATGCCACGGAGGC
droPer2 scaffold_13:1615693-1616095 + dpe_751 CTCTGTCACGCGTTAGCGAACTCCCACTTATTGTTAAGCAATTGCAAAAAGTACGTAATCCT---------G------TCACTAACCCCAGC--------------------------------------------GTTGTTAT---------------CACTAATCTCGAGCAAAAGCAAACAC-------------------------AA----CAAAAACAACAACAGCAGCAACAACAATACCAAAAACACACAACAAAGAAATGCATTAGCAC-AAGTG---------------------------------------------------------------------------------------------------GCG------GCAGCA---------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------CAGAAATCACTGGACAGTGCGGCTGCAACATCATAATCATCATCATCGACAGCGGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAACAGCAGCAT---------------CATCATCAACAGCTAAGCCTAAACATCTGTC-------GAGGTTATTCATCATCATTTTTCGGTCTATTCCAGAATGC------AGCACAGGCTGGCGTGGCCAAAACC---------AACAACTATGCCACGGAGGC
droWil2 scf2_1100000004909:4505154-4505478 - CTCTGTCACGCATTAGCGAATTACCAATCGTTGTTAGACAATTGCAAAAAGTACGTACTGCA---------A---------TTAACCAGGAC--------------------------------------------AATGTTTT---------------TACTAA---------------------------------------------------------CAACAACAGCAACA-----------------------------------------------------------------AC-------------------------------------------------------------AACAA----ACGAAGCAT--------------------------CAGCAACCACAGTCACAATAATAACAATAA---C------AATA------------------------------------------AGA---GC------------------C----------------------------------------------------------------------ACGGCAATCATTGGACAGAGCGGCTAAAAC------------------------------------------------------AACAACAACAACAACAGTT-----------------------G-ATAACTAACGGCAATC-------GCAGTTATTCATCATCATTTTTCGGTCTATTCCAGAGTGCATCAGCAGCACAGGGTGGTCTCAGCAAAACCAGCACCAACAACAACTATGCCACGGAAGC
droVir3 scaffold_12970:4137385-4137724 - dvi_13107 CGTTGTCGCGCGTTAGTGAATTGCCAATTATTGTAAAACAATTGCAAAAAGTACGTAACT--GTAAA-GCAGCCGTTG----------CTG----------------------------TCACTAACAAA------ACTCTTGT---------CACTGTCACCAATACAA------------------------------------------------------------------------------------------------------ACCAAC----------------------AAC-------------------------------------------------------------AACAT----ACAAAGCAA------GCCAACAGCA------------------GCAGCAACAATAGCAACAACTA---C------AGCATCAAC------------------------------------------------------CGCAACAACA-------------------------------------------------------------------AGTACAACAACCACTGGACAACGCAGCAGCAACAACTTA---------------------------------------------------------------------AAAATCAT------------CTAAGATTTGACAGCAGAC-------GCAGTTATTCATCGTCATTTTTCGGTTTATTCCAGAATGC------AGCACAGTCCGGTGTCGCAAAGACC---------AACAATTATGCCACGGAAGC
droMoj3 scaffold_6473:8708219-8708594 - dmo_709 CGTTGTCGCGCGTTAGTGAATTGCCAATTATTGTTAAGCAATTGCAAAAAGTACGTAACT--GTAAT-GCAGCCGTTG----------CTG----------------------------TCACTAACAAAACT---ATTGT------------AACTGTCACTAATACGAAGCAACACCAACAAC-------------------------AA----CAACAACAACAACAACA--------------------------------------------------------------------GC-------------------------------------------------------------AACAT----ACAAAGCAA------ACCAACAGAA------------------------------------------------------GCAGCAGAAGTT------ACAGTGACAACAACAATAA---CAGGA---GC-------------------------------------------------------AACTACAACAGCAATGTTAACAGCAGCAACAA----------CATTGGACGA--------------------------------------------------------------------------CAACAA---CATAAAAACCAC------------CTAAGATTTGACAGCAGAC-------GCAGTTATTCATCGTCATTTTTCGGTTTATTCCAGAATGC------AGCACAGGCCGGTGTCGCAAAGACC---------AATAATTATGCCACCGAAGC
droGri2 scaffold_15203:9812226-9812580 + CATTGTCACGCGTTAGTGAATTGCCAATTGTTGTAAAACAATTGCAAAAAGTACGTAACT--GTAAT-GCAG-----------------------------------------------CCGTTGCTGTTCCT--AACAA----AACCCTTGTCACTCTCACTAATACAAAGCAAG---------------------------------------------------GCAG----------------------------------------------C----------------------AGC-------------------------------------------------------------AACAT----AAGAAACAA--CCACAACTACAGGA---------------------------------------ACAACAAC---ATCTACAGCA------------------GCAGCAGCAGCAA---CAGCA---CC---------------CACA-------------------------------------------------------------------ACAACAACAATCATTGGACGACATGGCTGCAACAA------------------------------------------------------------CAACAA---TTAGAAAATCAT------------CAAAGATTTGCCAACAGAC-------GCAGTTATTCATCGTCATTTTTCGGTTTATTCCAGAATGC------AGCACAGTCTGGTGTCGCAAAGACC---------AACAACTATGCCACGGAGGC
droAna3 scaffold_12929:3174660-3175096 + GCCTGTCACGCGTTAGCGAATTGCCAATTATTGTTAAGCAACTGCAAAAAGTACGTAATCCT---------GC-TTGT---------CCAGCTTTAAGAAAAAATTCAAGAATATCTAAAAACTAACATCTCTCAAATGTTTGT---------------TACTAATTTTGTTCAAAAAAAAATATGCAAAAAAAAAATCAATTAAATCACTAA-AAC--AAA-----------------------------------------------------------------------------CAAC-------------------------------------------------------------AACACATACACAAAGCGTTGCAATAACAACAACA---------------------------------------------------------GTAGAAGTCGCACGATCAGCTGCAACAACAA------TAGCAACAATAACATCAACCGGAAGAGGA------ATACAACCGGAAATGGAGAAAGGATACT---A-------------------------------------------------------------------------------------------------------------------CTACAACAACAACAACAAT--------CATCATCA-----------TCACTGATATCTG---------TTAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCATCAGCTGGTGTGGCAAAAACC---------AACAACTATGCCACGGAGGC
droBip1 scf7180000395568:5711-6121 - CCCTGTCACGCGTTACCGAATTGCCAATTATTGTTAAGCAACTGCAAAAAGTACGTAATCCT---------GC-TT-G-------C-TCAGCT------AAAAACCAAAGTATAGATAAAACCTAACATCTCA--AATGTTTGT---------------TACTAATTTTGTTTAAAAAAAAAAATGCAAAA---AAACCAATTAAATCACTAA-AAC--AAA-----------------------------------------------------------------------------CAAC-------------------------------------------------------------AACACAAACACAAAGTGTTGCAACAGCAACAGCAATCGTACGATCAGCTGCA------------------------------------ACAAC------------------------------------------------------CGGAAGAACAACAACAATATACCAGGAAATGGAAAAAGGATACTGCAA-------------------------------------------------------------------------------------------------------------------CTACAACAACAACAT---------------CAATATCAACATCCA-TCACTGATAGCGG---------TTAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCATCAGCTGGTGTGGCAAAAACC---------AACAACTATGCCACGGAGGC
droKik1 scf7180000302469:106926-107258 + CCCTGTCACGCGTTAGCGAATTGCCAATTATTGTTAAGCAACTGCAAAAAGTACGTAATCCA---------G------TAACAAATCTCAC----------------------------CCACTAACATTTTT--AATTGTTGT---------------CACTAATTTAA-----------------------------------------------------------------------------------------------------------C-A---------------------ACAACAACAAAACACACGCACGAACCCAACCAACCAACAACAACAACGACTTAATACAATCAAA--ACA----AATAGCGCAGCCATAACAACAACA---------------------------------------------------TCGCCAGCGGA---------------AAGAACAACAACAA---CAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGAATGCAACATTGCAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCACAGGCTGGCGTTACGAAAACC---------AACAATTATGCCACGGAAGC
droFic1 scf7180000453775:88196-88495 - CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATCC---------CGA-CTTG----------CAC----------------------------CCACTAACATTTTT--AATTGTTAT---------------CACTA------------------------------------------------A--------------------------------------A----C---------C---------------CCCATT-AAA-AACATACAAC-------------------------------------------------------------AACACT----AAAAGCGTTGCCAAACCAACAACG------------------------------------------------------TCAGCGG---TTGGATATATAACGTCAACAACAACAAAAGCAGCAACAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-ACAT-CATCTGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAGGCAGGTGTATCAAAAACC---------AACAATTATGCCACGGAGGC
droEle1 scf7180000491011:1709592-1709860 - CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAAACCC--------CTT-TCTA----------CAC----------------------------CCACTAATATCACT--AATT----------------------------TGAAAC---------------------------------------------------------------------------------------------------------------------------------TACCAAAATA--------ACGAAC------------------------CCGAAAAAAATGAAAACA------AAAAGC------ATAACAACAACA---------------------------------------------------CCAACAG------GAGGATATATAACAACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCGGAAATG-------GAAGATATTCATCGTCGTTTTTCGGTCTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCAAAATCG---------AACAATTATGCCACGGAGGC
droRho1 scf7180000778083:162467-162727 + CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTTCAAAAAGTACGTAAACCC--------CTT-TCTA----------CAC----------------------------CCACTAATATCACT--AATT----------------------------TGAAAC---------------------------------------------------------------------------------------------------------------------------------TACCAACATA--------ACG--------------------------ACCTTAAAAAAT--AAACACA----AAAAGC------ATAACAACAACA-----------------------------------------------------------G----GAGGATATATAACAACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCGGAAATG-------GAAGATATTCATCGTCGTTTTTCGGTCTATTCCAGAATGC------AGCCCAAGCAGGTGCTTCAAAATCG---------AACAATTATGCCACGGAGGC
droBia1 scf7180000301703:99708-99980 - CTCTGTCGCGCGCCAGCGAGCTGCCCCTCATTGTTAAGCAACTGCAGAAGGTACGTAATC--CCCCG-CCCTC-CCC---------CTCCC----------------------------CCACTAACATTCCG--CACTTGTAC---------------CACTG------------------------------------------------A--------------------------------------------------CCA------CTAACCGAAATGTGC-CCACTGCTG-----------------------------------------------------------------GAACCAC------AAAGCGCTGCCCTAACAACAGCA---------------------------------------------------GCAGCG---------------------------------------------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-GCGC-CAGGGGAAGTG-------GCAGATACTCATCGTCGTTTTTCGGTCTCTTCCAGAATGC------AGCGCAGGCCGGAGTGTCGAGGAGC---------AACAACTATGCCACGGAGGC
droTak1 scf7180000414746:80876-81200 + CTCTGTCGCGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATC--CCAAA-CCCGC-TTGG----------CAC----------------------------CCACTAACTTTCTT--AATTGTTAT---------------CACTTATCACTA---AAATCTA-------------------------------AAAAA--AAA----------------------TAAAAAAA----C---------C---------------CACATT-GCAAAATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTGCCATAACAACAACA---------------------------------------A------------CAACAGCGGATGGCGGATATATAGCAACAACAACAACAA------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-AAAT-CATCAGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------GGCCCAAGCAGGTGTCTCAAAGACC---------AATAACTATGCCACGGAGGC
droEug1 scf7180000409548:374077-374393 + CTCTGTCACGCGTTAGCGAATTGCCAATTATTGTTAAGCAACTGCAAAAAGTACGTAATA--CCAAAACCCGC-TTTG----------CAC----------------------------CCACTAACATTTTT--AATTGTTAT---------------CACTA------------------------------------------------A-AAC--AAA----------------------AAAAAAAACACAC---------C---------------ATCATTCAAATAATG-----------------------------------------------------------------AAAACACA---AAAAAGCGTTGCCATAACAACAACA---------------------------------------A------------CAACAATGGATGGCGGATATATAACAACAAGAACAACAA---CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT-CATCGGAAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGAGTTTCAAAAACC---------AACAATTATGCCACGGAGGC
dm3 chrX:4596575-4596906 + CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATC--CCAAT-CCCGC-TTTG----------CAC----------------------------CCACTAACATTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------A-AATGCAATTGAAC-AAATCCAT-TCGATAATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTGCCATAACAACAACA---------------------------------------ACAACAACATCATCATCAGCGGATGTCGGATACTTAGCAACAACAACAACAA---CAGCAGCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCGAAAACC---------AACAATTATGCCACGGAGGC
droSim2 x:4287023-4287346 + CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATC--CCAAT-CCCGC-TTTG----------CAC----------------------------CCACTAACATTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------AAAATGCAATTGAAC-AAATCCAT-TCGATAATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTGCCATAACAACAACA---------------------------------------ACAAC------ATCATCAGCGGATGTCGGATACTTAGCAACAACAACAACAA---CAGCA---TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCGAAAACC---------AACAATTATGCCACGGAGGC
droSec2 scaffold_4:2133560-2133882 - CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAA-AAGTACGTAATC--CCAAT-CCCGC-TTTG----------CAC----------------------------CCACTAACATTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------AAAATGCAATTGAAC-AAATCCAT-TCGATAATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTGCCATAACAACAACA---------------------------------------ACAAC------ATCATCAGCGGATGTCGGATACTTAGCAACAACAACAACAA---CAGCA---TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCGAAAACC---------AACAATTATGCCACGGAGGC
droYak3 X:3843752-3844069 - CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATC--CCAAT-CCTGC-TTTG----------CAC----------------------------CCACTAACACTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------A-AATCCATCTGACCCAAACCCGT-TTGATAATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTGCCATAACAACAACA---------------------------------------------------TCATCGGCGGATGTCGGATATTTAGCAACAACCACAACAA---CAGCA---AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-ATAT-CATCAGGAACG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCAAAAACC---------AACAATTATGCCACGGAGGC
droEre2 scaffold_4690:1973503-1973825 + CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATC--CCAAT-CCCGC-TATG----------CAC----------------------------CCACTAACATTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------A-AATGCAATTGAACAAAACCCAT-TTGA-AATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTACCATAACAACAACA---------------------------------------A---C------ATCATCAGTGGATGTCGGATATTTAGCAACAACAACAACAG---CAGCAACACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCAAAAACC---------AACAATTATGCCACGGAAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTCTGTCACGCGTTAGCGAACTCCCACTTATTGTTAAGCAATTGCAAAAAGTACGTAATCCT---------G------TCACTAACCCCAGC--------------------------------------------GTTGTTAT---------------CACTAATCTCGAGCAAAAGCAAACAC-------------------------TA----CAAAAACAACAACAGCAGCAACAACAATACCAAAAACACACAACAAAGAAATGCATTAGCAC-AAGTG---------------------------------------------------------------------------------------------------GCG------GCAACA---------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAATCACTGGACAGTGCGGCTGCAACATCATAATCATCATCATCGACAGCGGCAGCAGCAG---------------CAGCAGCAACGGCAGCAT---------------CATCATCAACAGCTAAGCCTAAACATCTGTC-------GAGGTTATTCATCATCATTTTTCGGTCTATTCCAGAATGC------AGCACAGGCTGGCGTGGCCAAAACC---------AACAACTATGCCACGGAGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACC---------AACAACTATGCCACGGAGG.2312.0020100010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AGCACAGGCTGGCGTGGCCAAAACC---------A...................2812.0020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGGCTGGCGTGGCCAA.................................2012.0020100010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGGCTGGCGTGGCCA..................................1912.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC------AGCACAGGCTGGCGTGGCC...................................2212.0020101000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGC------AGCACAGGCTGGCGTGGCCAAA................................2712.0020100001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAACAGCTAAGCCTA.....................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGC------AGCACAGGCTGGCGTGGCCAA.................................2611.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC------AGCACAGGCTGGCGTGGCCAAA................................2611.0010100000000
.................GAACTCCCACTTATTGTTAAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGC------AGCACAGGCTGGCGTGGCC...................................2411.0010001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTATGCCACGGAG..1811.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTGGCGTGGCCAAAACC---------....................2111.0010001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTGGACAGTGCGGCTGC................................................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCTGGCGTGGCCAAAACC---------AAC.................2511.0010001000000
CTCTGTCACGCGTTAGCGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................AAGAAATGCATTAGCAC-AAGTG---------------------------------------------------------------------------------------------------GC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC------AGCACAGGCTGGCGTGGC....................................2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AGCACAGGCTGGCGTGG.....................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC------AGCACAGGCTGGCGTGGCCAAAACC---------....................2811.0010001000000
........CGCGTTAGCGAACTCCCACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGC------AGCACAGGCTGGCGTGGCCA..................................2511.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AGCACAGGCTGGCGTGGCCAAA................................2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC------AGCACAGGCTGGCGTGGCCAAAA...............................2711.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCTAAGCCTAAACATCTGTC-------GAG.................................................................................................2711.0010100000000
.........................................................................................................................................TTGTTAT---------------CACTAATCTCGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCTATTCCAGAATGC------AGC...................................................2111.0010001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACC---------AACAACTATGCCACGGAGG.2611.0010010000000
....GTCACGCGTTAGCGAACTCCCACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTATGCCACGGAGGC2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGCTGGCGTGGCCAAAACC---------A...................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATGC------AGCACAGGCTGGC.........................................2011.0010100000000
...............GCGAACTCCCACTTATTGTTAAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACC---------AACAACTATGCCACGGAGG.2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG---------------CAGCAGCAACGGCAGC...........................................................................................................................................................22120.0810000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGGCAGCAGCAG---------------CAGCA......................................................................................................................................................................20200.0510001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGCAGCAGCAG---------------CAGCA......................................................................................................................................................................19200.0510100000000
............................................................................................................................................................................................................................AACAACAACAGCAGCAACAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG---------------CAGCAGCAACGGCA.............................................................................................................................................................19200.0510000100000
.............................................................................................................................................................................................................................ACAACAACAGCAGCAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
droPer2
CTCTGTCACGCGTTAGCGAACTCCCACTTATTGTTAAGCAATTGCAAAAAGTACGTAATCCT---------G------TCACTAACCCCAGC--------------------------------------------GTTGTTAT---------------CACTAATCTCGAGCAAAAGCAAACAC-------------------------AA----CAAAAACAACAACAGCAGCAACAACAATACCAAAAACACACAACAAAGAAATGCATTAGCAC-AAGTG---------------------------------------------------------------------------------------------------GCG------GCAGCA---------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------CAGAAATCACTGGACAGTGCGGCTGCAACATCATAATCATCATCATCGACAGCGGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAACAGCAGCAT---------------CATCATCAACAGCTAAGCCTAAACATCTGTC-------GAGGTTATTCATCATCATTTTTCGGTCTATTCCAGAATGC------AGCACAGGCTGGCGTGGCCAAAACC---------AACAACTATGCCACGGAGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTGGACAGTGCGGCTGCAAC.............................................................................................................................................................................................................................2212.002200000
.........................................................................................AGC--------------------------------------------GTTGTTAT---------------CACTAATCTCGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCATTTTTCGGTCT........................................................................1912.002200000
............................................................CT---------G------TCACTAACCCCAGC--------------------------------------------GTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................AGCA---------------------------------------------------------A----------------------------------------------------------------------------------------------------------------------------------------CAGAAATCACTGGA............................................................................................................................................................................................................................................1911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACC---------AACAACTATGCCACGGAG..2111.001010000
........................................................AATCCT---------G------TCACTAACCCCAGC--------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.................GAACTCCCACTTATTGTTAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................GAACTCCCACTTATTGTTAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AGCACAGGCTGGCGTGGCCAAAACC---------....................2711.001010000
..............AGCGAACTCCCACTTATTGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.........GCGTTAGCGAACTCCCACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........GTTAGCGAACTCCCACTTATTGTTAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTTCGGTCTATTCCAGA................................................................2111.001100000
..................................................GTACGTAATCCT---------G------TCACTAACCCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCACTGGACAGTGCGGCTGG................................................................................................................................................................................................................................2211.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC------AGCACAGGCTGGCGTGGCCA..................................2411.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATTTTTCGGTCTATTCC...................................................................2111.001100000
....GTCACGCGTTAGCGAACTCCCACTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACTATGCCACGGAGG.1811.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCGACAGCGGCAGG...............................................................................................................................................................................................1930.331100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAGCAGCAG.....................................................................................................................................................................19200.051001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAACA................................................................................................................................................................20200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCA..........................................................................................................................................................18200.051001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAGCAGCA..........................................................................................................................................................22200.051001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAACA...............................................................................................................................................................................19200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAGC....................................................................................................................................................................19200.051001000
............................................................................................................................................................................................................................AACAACAACAGCAGCAACAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
droWil2
CTCTGTCACGCATTAGCGAATTACCAATCGTTGTTAGACAATTGCAAAAAGTACGTACTGCA---------A---------TTAACCAGGAC--------------------------------------------AATGTTTT---------------TACTAA---------------------------------------------------------CAACAACAGCAACA-----------------------------------------------------------------AC-------------------------------------------------------------AACAA----ACGAAGCAT--------------------------CAGCAACCACAGTCACAATAATAACAATAA---C------AATA------------------------------------------AGA---GC------------------C----------------------------------------------------------------------ACGGCAATCATTGGACAGAGCGGCTAAAAC------------------------------------------------------AACAACAACAACAACAGTT-----------------------G-ATAACTAACGGCAATC-------GCAGTTATTCATCATCATTTTTCGGTCTATTCCAGAGTGCATCAGCAGCACAGGGTGGTCTCAGCAAAACCAGCACCAACAACAACTATGCCACGGAAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................GAATTACCAATCGTTGTTAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00320010
...................ATTACCAATCGTTGTTAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00330000
.....................TACCAATCGTTGTTAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00330000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTATGCCACGGAAGC2013.00300210
..................AATTACCAATCGTTGTTAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00330000
...................ATTACCAATCGTTGTTAGACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00220000
...........ATTAGCGAATTACCAATCGTTGTTAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00220000
...................ATTACCAATCGTTGTTAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000
.................GAATTACCAATCGTTGTTAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00220000
........CGCATTAGCGAATTACCAATCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGGTGGTCTCAGCAA.................................1811.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAGCACCAACAACAACTATGC.........2411.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTCCAGAGTGCATCAGCAGCACAGGGT............................................3011.00100100
CTCTGTCACGCATTAGCGAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACTATGCCACGGAAGC2111.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCACAGGGTGGTCTCA.....................................2011.00100100
............................................................................................................................................................................................................................................................................................................................................................................AACAA----ACGAAGCAT--------------------------CAGCAACCACAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAGCACAGGGTGGT.........................................2011.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------C----------------------------------------------------------------------ACGGCAATCATTGGACAGAGC......................................................................................................................................................................................................................................2311.00100010
...................................AGACAATTGCAAAAAGTACGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACAGGGTGGTCTCAGCA..................................2011.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCACAGGGTGG..........................................1811.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTATGCCACGGAAGC1811.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................GAAGCAT--------------------------CAGCAACCACAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGGTCTATTCCAGAGTGC............................................................2111.00100001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCAATCATTGGACAGAGCGGCT..................................................................................................................................................................................................................................2511.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTTTCGGTCTATTCCA..................................................................2011.00100001
..................AATTACCAATCGTTGTTAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------C----------------------------------------------------------------------ACGGCAATCATTGGACAGAGCGG....................................................................................................................................................................................................................................2611.00100100
...................ATTACCAATCGTTGTTAGACAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
..........................................................TGCA---------A---------TTAACCAGGAC--------------------------------------------AATGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
............TTAGCGAATTACCAATCGTTGTTAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
.........GCATTAGCGAATTACCAATCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
.............................................................................................................................................TTT---------------TACTAA---------------------------------------------------------CAACAACAGCAACA-----------------------------------------------------------------A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
...................................AGACAATTGCAAAAAGTACGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.....................TACCAATCGTTGTTAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCACAGGGTGGTCTC......................................2211.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAC------------------------------------------------------AACAACAACAACAACA.......................................................................................................................................................22200.05101000
droVir3
CGTTGTCGCGCGTTAGTGAATTGCCAATTATTGTAAAACAATTGCAAAAAGTACGTAACT--GTAAA-GCAGCCGTTG----------CTG----------------------------TCACTAACAAA------ACTCTTGT---------CACTGTCACCAATACAA------------------------------------------------------------------------------------------------------ACCAAC----------------------AAC-------------------------------------------------------------AACAT----ACAAAGCAA------GCCAACAGCA------------------GCAGCAACAATAGCAACAACTA---C------AGCATCAAC------------------------------------------------------CGCAACAACA-------------------------------------------------------------------AGTACAACAACCACTGGACAACGCAGCAGCAACAACTTA---------------------------------------------------------------------AAAATCAT------------CTAAGATTTGACAGCAGAC-------GCAGTTATTCATCGTCATTTTTCGGTTTATTCCAGAATGC------AGCACAGTCCGGTGTCGCAAAGACC---------AACAATTATGCCACGGAAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AGCACAGTCCGGTGTCGCA...................................2112.002001000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC------AGCACAGTCCGGTGTCGCA...................................2212.002001000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGGTGTCGCAAAGACC---------....................1912.002001000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGGTGTCGCAAAGACC---------A...................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACC---------AACAATTATGCCACGGAAGC2411.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACTA---C------AGCATCA...................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
....GTCGCGCGTTAGTGAATTGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.GTTGTCGCGCGTTAGTGAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
CGTTGTCGCGCGTTAGTGAATTGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCAGCAGCAACAACTTA---------------------------------------------------------------------AA................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT------------CTAAGATTTGACAGCAGAA-------....................................................................................................2211.001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGACAGCAGAC-------GCAGTTAT............................................................................................2311.001000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGTCGCAAAGACC---------AACA................2011.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGATTTGACAGCAGAC-------GC..................................................................................................2011.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AGCACAGTCCGGTGTCGCC...................................2111.001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCCGGTGTCGCAAAGACC---------AACAA...............2711.001000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAAC------------------------------------------------------CGCAACAACA-------------------------------------------------------------------AGT...........................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................ATTATTGTAAAACAATTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACTTA---------------------------------------------------------------------AAAATCAT------------C.............................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................AT----ACAAAGCAA------GCCAACAGCA------------------GCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTCCGGTGTCGCAAAGAC..............................2111.001000000000000000000000000000000000000100000000000000000000000000
...........GTTAGTGAATTGCCAATTATTGTAAAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACCACTGGACAACGC......................................................................................................................................................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
...TGTCGCGCGTTAGTGAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
..TTGTCGCGCGTTAGTGAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
..TTGTCGCGCGTTAGTGAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
........CGCGTTAGTGAATTGCCAATTATTGTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGACAGCAGAC-------GCAGTTA.............................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT------------CTAAGATTTGACAGCAGAC-------GCAGT...............................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGACAACGCAGCAGCAACAA...........................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
...............GTGAATTGCCAATTATTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCCGGTGTCGCAAAGACC---------A...................2211.001000000000000000000010000000000000000000000000000000000000000000
...........GTTAGTGAATTGCCAATTATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGACAGCAGAC-------GCAGTT..............................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGTCCGGTGTCGCAAA.................................2011.001000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCGGTGTCGCAAAGACC---------A...................2111.001000000000000000000010000000000000000000000000000000000000000000
..........................................................CT--GTAAA-GCAGCCGTTG----------CTG----------------------------TCACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC------AGCACAGTCCGGTGTCG.....................................2111.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-------GCAGTTATTCATCGTCATTT................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAT------------CTAAGATTTGACAGCAGAC-------GCA.................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA-------------------------------------------------------------------AGTACAACAACCACTGGACAACGCA.....................................................................................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................GCCAACAGCA------------------GCAGCAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
CGTTGTCGCGCGTTAGTGAATTGCCAATTATTGTTAAGCAATTGCAAAAAGTACGTAACT--GTAAT-GCAGCCGTTG----------CTG----------------------------TCACTAACAAAACT---ATTGT------------AACTGTCACTAATACGAAGCAACACCAACAAC-------------------------AA----CAACAACAACAACAACA--------------------------------------------------------------------GC-------------------------------------------------------------AACAT----ACAAAGCAA------ACCAACAGAA------------------------------------------------------GCAGCAGAAGTT------ACAGTGACAACAACAATAA---CAGGA---GC-------------------------------------------------------AACTACAACAGCAATGTTAACAGCAGCAACAA----------CATTGGACGA--------------------------------------------------------------------------CAACAA---CATAAAAACCAC------------CTAAGATTTGACAGCAGAC-------GCAGTTATTCATCGTCATTTTTCGGTTTATTCCAGAATGC------AGCACAGGCCGGTGTCGCAAAGACC---------AATAATTATGCCACCGAAGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...TGTCGCGCGTTAGTGAATTGCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAACAACAATAA---CAGGA---GC-------------------------------------------------------AA...........................................................................................................................................................................................................................................................................................2311.001000001
.GTTGTCGCGCGTTAGTGAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTTCGGTTTATTCCAGAAT..............................................................2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCCGGTGTCGCAAAGAC..............................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCGTCATTTTTCGGTTT........................................................................2011.001100000
CGTTGTCGCGCGTTAGTGAATTGCCAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATAA---CAGGA---GC-------------------------------------------------------AACTACAACA...................................................................................................................................................................................................................................................................................2511.001000001
...................................................................................................................................................................AATACGAAGCAACACCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................AACAGAA------------------------------------------------------GCAGCAGAAGTT------ACAGTGACA...........................................................................................................................................................................................................................................................................................................................................................................2811.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC------AGCACAGGCCGGTGTCGCA...................................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGGCCGGTGTCGCAAAGACC---------....................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAA---CAGGA---GC-------------------------------------------------------AACTACAACAGC.................................................................................................................................................................................................................................................................................2311.001010000
......................................................................................................................................................................................................................................ACA--------------------------------------------------------------------GC-------------------------------------------------------------AACAT----ACAAAGCAA------ACCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AGCACAGGCCGGTGTCGCA...................................2011.001000001
........................................................AACT--GTAAT-GCAGCCGTTG----------CT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..TTGTCGCGCGTTAGTGAATTGCCAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC------AGCACAGGCCGGTGTCGCAAAGA...............................2611.001100000
............................................................................................................................................................................................................................AACAACAACAACA--------------------------------------------------------------------GC-------------------------------------------------------------AACAT----AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331000010
droGri2
CATTGTCACGCGTTAGTGAATTGCCAATTGTTGTAAAACAATTGCAAAAAGTACGTAACT--GTAAT-GCAG-----------------------------------------------CCGTTGCTGTTCCT--AACAA----AACCCTTGTCACTCTCACTAATACAAAGCAAG---------------------------------------------------GCAG----------------------------------------------C----------------------AGC-------------------------------------------------------------AACAT----AAGAAACAA--CCACAACTACAGGA---------------------------------------ACAACAAC---ATCTACAGCA------------------GCAGCAGCAGCAA---CAGCA---CC---------------CACA-------------------------------------------------------------------ACAACAACAATCATTGGACGACATGGCTGCAACAA------------------------------------------------------------CAACAA---TTAGAAAATCAT------------CAAAGATTTGCCAACAGAC-------GCAGTTATTCATCGTCATTTTTCGGTTTATTCCAGAATGC------AGCACAGTCTGGTGTCGCAAAGACC---------AACAACTATGCCACGGAGGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAC-------GCAGTTATTCATCGTCATT.................................................................................2211.00110
droAna3
GCCTGTCACGCGTTAGCGAATTGCCAATTATTGTTAAGCAACTGCAAAAAGTACGTAATCCT---------GC-TTGT---------CCAGCTTTAAGAAAAAATTCAAGAATATCTAAAAACTAACATCTCTCAAATGTTTGT---------------TACTAATTTTGTTCAAAAAAAAATATGCAAAAAAAAAATCAATTAAATCACTAA-AAC--AAA-----------------------------------------------------------------------------CAAC-------------------------------------------------------------AACACATACACAAAGCGTTGCAATAACAACAACA---------------------------------------------------------GTAGAAGTCGCACGATCAGCTGCAACAACAA------TAGCAACAATAACATCAACCGGAAGAGGA------ATACAACCGGAAATGGAGAAAGGATACT---A-------------------------------------------------------------------------------------------------------------------CTACAACAACAACAACAAT--------CATCATCA-----------TCACTGATATCTG---------TTAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCATCAGCTGGTGTGGCAAAAACC---------AACAACTATGCCACGGAGGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC------AGCATCAGCTGGTGTGGCA...................................2313.003100002
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAGCTGGTGTGGCAA..................................1912.002200000
.........................AATTATTGTTAAGCAACTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------------------------------------------------GTAGAAGTCGCACG.....................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------TAGCAACAATAACATCAACC..........................................................................................................................................................................................................................................................................................................................................2111.001010000
...........GTTAGCGAATTGCCAATTATTGTTAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------------------------------------CTACAACAACAACAACAAT--------CATCATC......................................................................................................................................2711.001010000
..CTGTCACGCGTTAGCGAATTGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAAT--------CATCATCA-----------TCACT.....................................................................................................................2911.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACC---------AACAACTATGCCACGGAGGC2311.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCTGGTGTGGCAAAAAC..............................2111.001010000
.................GAATTGCCAATTATTGTTAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
............................TATTGTTAAGCAACTGCAAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............................ATTGTTAAGCAACTGCAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...........GTTAGCGAATTGCCAATTATTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAGCTGGTGTGGCAAAAAC..............................2311.001000100
GCCTGTCACGCGTTAGCGAATTGCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAGCTGGTGTGGCA...................................1911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCGGAAATGGAGAAAGG....................................................................................................................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGC------AGCATCAGCTGGTGTGGCA...................................2411.001000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAGCTGGTGTGGCAAAAAC..............................2411.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAAAAACC---------AACAACTATGC.........2311.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAGCTGGTGTGGCAAAA................................2111.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCGGAAATGGAGAAAGGATA.................................................................................................................................................................................................................................................................................................2411.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGCTGCAACAACAA------TAGCAAC.......................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC------AGCATCAGCTGGTGTGGCA...................................2211.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCTGGTGTGGCAAA.................................1911.001000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACC---------AACAACTATGC.........1811.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAACAACAACAACAAT--------.............................................................................................................................................18130.081010000
droBip1
CCCTGTCACGCGTTACCGAATTGCCAATTATTGTTAAGCAACTGCAAAAAGTACGTAATCCT---------GC-TT-G-------C-TCAGCT------AAAAACCAAAGTATAGATAAAACCTAACATCTCA--AATGTTTGT---------------TACTAATTTTGTTTAAAAAAAAAAATGCAAAA---AAACCAATTAAATCACTAA-AAC--AAA-----------------------------------------------------------------------------CAAC-------------------------------------------------------------AACACAAACACAAAGTGTTGCAACAGCAACAGCAATCGTACGATCAGCTGCA------------------------------------ACAAC------------------------------------------------------CGGAAGAACAACAACAATATACCAGGAAATGGAAAAAGGATACTGCAA-------------------------------------------------------------------------------------------------------------------CTACAACAACAACAT---------------CAATATCAACATCCA-TCACTGATAGCGG---------TTAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCATCAGCTGGTGTGGCAAAAACC---------AACAACTATGCCACGGAGGCSizeHit CountTotal NormTotal
No Reads
droKik1
CCCTGTCACGCGTTAGCGAATTGCCAATTATTGTTAAGCAACTGCAAAAAGTACGTAATCCA---------G------TAACAAATCTCAC----------------------------CCACTAACATTTTT--AATTGTTGT---------------CACTAATTTAA-----------------------------------------------------------------------------------------------------------C-A---------------------ACAACAACAAAACACACGCACGAACCCAACCAACCAACAACAACAACGACTTAATACAATCAAA--ACA----AATAGCGCAGCCATAACAACAACA---------------------------------------------------TCGCCAGCGGA---------------AAGAACAACAACAA---CAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGGAATGCAACATTGCAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCACAGGCTGGCGTTACGAAAACC---------AACAATTATGCCACGGAAGCSizeHit CountTotal NormTotal
No Reads
droFic1
CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATCC---------CGA-CTTG----------CAC----------------------------CCACTAACATTTTT--AATTGTTAT---------------CACTA------------------------------------------------A--------------------------------------A----C---------C---------------CCCATT-AAA-AACATACAAC-------------------------------------------------------------AACACT----AAAAGCGTTGCCAAACCAACAACG------------------------------------------------------TCAGCGG---TTGGATATATAACGTCAACAACAACAAAAGCAGCAACAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-ACAT-CATCTGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAGGCAGGTGTATCAAAAACC---------AACAATTATGCCACGGAGGCSizeHit CountTotal NormTotal
No Reads
droEle1
CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAAACCC--------CTT-TCTA----------CAC----------------------------CCACTAATATCACT--AATT----------------------------TGAAAC---------------------------------------------------------------------------------------------------------------------------------TACCAAAATA--------ACGAAC------------------------CCGAAAAAAATGAAAACA------AAAAGC------ATAACAACAACA---------------------------------------------------CCAACAG------GAGGATATATAACAACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCGGAAATG-------GAAGATATTCATCGTCGTTTTTCGGTCTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCAAAATCG---------AACAATTATGCCACGGAGGCSizeHit CountTotal NormTotal
No Reads
droRho1
CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTTCAAAAAGTACGTAAACCC--------CTT-TCTA----------CAC----------------------------CCACTAATATCACT--AATT----------------------------TGAAAC---------------------------------------------------------------------------------------------------------------------------------TACCAACATA--------ACG--------------------------ACCTTAAAAAAT--AAACACA----AAAAGC------ATAACAACAACA-----------------------------------------------------------G----GAGGATATATAACAACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCGGAAATG-------GAAGATATTCATCGTCGTTTTTCGGTCTATTCCAGAATGC------AGCCCAAGCAGGTGCTTCAAAATCG---------AACAATTATGCCACGGAGGCSizeHit CountTotal NormTotal
No Reads
droBia1
CTCTGTCGCGCGCCAGCGAGCTGCCCCTCATTGTTAAGCAACTGCAGAAGGTACGTAATC--CCCCG-CCCTC-CCC---------CTCCC----------------------------CCACTAACATTCCG--CACTTGTAC---------------CACTG------------------------------------------------A--------------------------------------------------CCA------CTAACCGAAATGTGC-CCACTGCTG-----------------------------------------------------------------GAACCAC------AAAGCGCTGCCCTAACAACAGCA---------------------------------------------------GCAGCG---------------------------------------------GC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-GCGC-CAGGGGAAGTG-------GCAGATACTCATCGTCGTTTTTCGGTCTCTTCCAGAATGC------AGCGCAGGCCGGAGTGTCGAGGAGC---------AACAACTATGCCACGGAGGCSizeHit CountTotal NormTotal
No Reads
droTak1
CTCTGTCGCGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATC--CCAAA-CCCGC-TTGG----------CAC----------------------------CCACTAACTTTCTT--AATTGTTAT---------------CACTTATCACTA---AAATCTA-------------------------------AAAAA--AAA----------------------TAAAAAAA----C---------C---------------CACATT-GCAAAATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTGCCATAACAACAACA---------------------------------------A------------CAACAGCGGATGGCGGATATATAGCAACAACAACAACAA------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-AAAT-CATCAGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------GGCCCAAGCAGGTGTCTCAAAGACC---------AATAACTATGCCACGGAGGCSizeHit CountTotal NormTotal
No Reads
droEug1
CTCTGTCACGCGTTAGCGAATTGCCAATTATTGTTAAGCAACTGCAAAAAGTACGTAATA--CCAAAACCCGC-TTTG----------CAC----------------------------CCACTAACATTTTT--AATTGTTAT---------------CACTA------------------------------------------------A-AAC--AAA----------------------AAAAAAAACACAC---------C---------------ATCATTCAAATAATG-----------------------------------------------------------------AAAACACA---AAAAAGCGTTGCCATAACAACAACA---------------------------------------A------------CAACAATGGATGGCGGATATATAACAACAAGAACAACAA---CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT-CATCGGAAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGAGTTTCAAAAACC---------AACAATTATGCCACGGAGGCSizeHit CountTotal NormTotal
No Reads
dm3
CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATC--CCAAT-CCCGC-TTTG----------CAC----------------------------CCACTAACATTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------A-AATGCAATTGAAC-AAATCCAT-TCGATAATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTGCCATAACAACAACA---------------------------------------ACAACAACATCATCATCAGCGGATGTCGGATACTTAGCAACAACAACAACAA---CAGCAGCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCGAAAACC---------AACAATTATGCCACGGAGGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAGCAGGTGTTTCGAA.................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGTTTCGAAAACC---------AACA................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAGCAGGTGTTTCG...................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AGCCCAAGCAGGTGTTTCG...................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGAATG-------GGAGATATTC..........................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGGTTTATTCCAGAATG.............................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAGATAT............................................................................................2512.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC------AGCCCAAGCAGGTGTTTCGAAA................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCACGCGTTAGCGAATTGCCCATTATTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC------AGCCCAAGCAGGTGTTTCGA..................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAG................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGGTGTTTCGAAAACC---------AAC.................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-ATAT-CATCAGGAATG-------GGA.................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAA---CAGCAGCAT.....................................................................................................................................................................................................................................................................................................................................................2131.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGC------AGCCCAAGCAGGTGT.......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-CATCAGGAATG-------GGAGATATTCATC.......................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACA---------------------------------------ACAACAACATCATCATA....................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACC---------AACAATTATGCCACG.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-CATCAGGAATG-------GGAGT...............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCGGATACTTAGCAACAA..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCGGATACTTAGCAACAACA........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCAAGCAGGTGTTTC....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGAATG-------GGAGATAT............................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.TCTGTCACGCGTTAGCGAATTGCCCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAATGC------AGCCCAAGCAGGTGT.......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TCTGTCACGCGTTAGCGAATTGCCCATTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGAATG-------GGAGATATTCA.........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................ATTGCCCATTATTGTTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-CATCAGGAATG-------GGAGATATTCA.........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGAATG-------GGAGATATTCAT........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGAATG-------GGAGATATTCATC.......................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAGATAT............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................ACACT----AAAAGCGTTGCCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATG-------GGAGATATTCATCGT.....................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-------GGAGATATTCATCGTCGTT.................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GCGTTAGCGAATTGCCCATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................GAATTGCCCATTATTGTTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGTGTTTCGAAAACC---------AACAA...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CAAT-CCCGC-TTTG----------CAC----------------------------CCACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................ACACT----AAAAGCGTTGCCATAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AGCCCAAGCAGGTGTT......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGA.................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.............TAGCGAATTGCCCATTATTGTTAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................................................................................................CGATAATG-----------------------------------------------------------------AAAACACT----AAAAGCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------G...................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-ATAT-CATCAGGAATG-------GGAG................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........GTTAGCGAATTGCCCATTATTGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTTTCGAAAACC---------AACA................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCATCGTCGTTTTTCGG...........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATC--CCAAT-CCCGC-TTTG----------CAC----------------------------CCACTAACATTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------AAAATGCAATTGAAC-AAATCCAT-TCGATAATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTGCCATAACAACAACA---------------------------------------ACAAC------ATCATCAGCGGATGTCGGATACTTAGCAACAACAACAACAA---CAGCA---TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCGAAAACC---------AACAATTATGCCACGGAGGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGGTGTTTCGAAAAC..............................1912.00200000000000200000
.........................................................................................................................................................................................................................................................................AATGCAATTGAAC-AAATCCAT-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCATCGTCGTTTTTCGGT..........................................................................2011.00101000000000000000
................................................................................................................................TTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGGTGTTTCGAAA................................1711.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCAGAATGC------AGCCCAAG..............................................2011.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCAACAACAACAACAA---CAGCA---T.....................................................................................................................................................................................................................................................................................................................................................2511.00100000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC------AGCCCAAGCAGGTGTTTCGAA.................................2411.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATATTCATCGTCGTTTT...............................................................................2111.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CAGCA---TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAG................................................................................................................1911.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGC------AGCCCAAGCAGGTGTT......................................2111.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCAACAACAACAACAA---CAGCA---......................................................................................................................................................................................................................................................................................................................................................2421.00200002000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCATCGTCGTTTTTCGGTT.........................................................................2111.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACC---------AACAATTATGCCACGGAG..2511.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAAACC---------AACAATTATGCCACGGA...2611.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTCCAGAATGC------AGCCCAA...............................................2011.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTCATCGTCGTTTTTCGGT..........................................................................2211.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAAACC---------AACAATTATGCCACGG....2511.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGAAAACC---------AACAATTATGCCACG.....2411.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTCCAGAATGC------AGCCCAAGCAGGTG........................................2811.00100000010000000000
........................................................AATC--CCAAT-CCCGC-TT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.50100000001000000000
droSec2
CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAA-AAGTACGTAATC--CCAAT-CCCGC-TTTG----------CAC----------------------------CCACTAACATTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------AAAATGCAATTGAAC-AAATCCAT-TCGATAATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTGCCATAACAACAACA---------------------------------------ACAAC------ATCATCAGCGGATGTCGGATACTTAGCAACAACAACAACAA---CAGCA---TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCGAAAACC---------AACAATTATGCCACGGAGGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGA.................................................................................................2111.0010001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAAAACC---------AACAATTATGCCA.......2311.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGTGTTTCGAAAACC---------AACA................2311.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-CATCAGGAATG-------GGAGA...............................................................................................1811.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGGAATG-------GGAGATATT...........................................................................................2011.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-CATCAGGAATG-------GGAGAT..............................................................................................1911.0010001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAACAA---CAGCA---TC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATA........................................................................................................................2811.0010100
..................................................GTACGTAATC--CCAAT-CCCGC-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGTGTTTCGAAAACC---------A...................1911.0011000
.......................................................TAATC--CCAAT-CCCGC-TTTG----------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGTGTTTCGAAAACC---------A...................2011.0010100
........CGCGTTAGCGAATTGCCCATTAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAACC---------AACAATTATGCCACGGA...2511.0010010
.................GAATTGCCCATTATTGTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CATCAGGAATG-------GGAGATATT...........................................................................................2111.0011000
droYak3
CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATC--CCAAT-CCTGC-TTTG----------CAC----------------------------CCACTAACACTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------A-AATCCATCTGACCCAAACCCGT-TTGATAATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTGCCATAACAACAACA---------------------------------------------------TCATCGGCGGATGTCGGATATTTAGCAACAACCACAACAA---CAGCA---AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-ATAT-CATCAGGAACG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCAAAAACC---------AACAATTATGCCACGGAGGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................TGCCCATTATTGTTAAGCAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAGCA---AC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-ATAT-CATCAGGAACG-------GG..................................................................................................2711.00100000010000
.......................CCCATTATTGTTAAGCAACTGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGGAACG-------GGAGATATTC..........................................................................................2111.00100000010000
...............................................................................................................................................................................................................................................................................TCTGACCCAAACCCGT-TTGATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
...............................................................................................................................................................................................................................................................................TCTGACCCAAACCCGT-TTGATAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
................................................................................................................................................................................................................................................................................CTGACCCAAACCCGT-TTGATAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AACAACA---------------------------------------------------TCATCGGCGGATGT...........................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CATCAGGAACG-------GGAGATATTCATC.......................................................................................2511.00101000000000
CTCTGTCACGCGTTAGCGAATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEre2
CTCTGTCACGCGTTAGCGAATTGCCCATTATTGTTAAGCAACTGCAAAAAGTACGTAATC--CCAAT-CCCGC-TATG----------CAC----------------------------CCACTAACATTTCT--AATTGTTGT---------------CACTA------------------------------------------------A--------------------------------------------------A-AATGCAATTGAACAAAACCCAT-TTGA-AATG-----------------------------------------------------------------AAAACACT----AAAAGCGTTACCATAACAACAACA---------------------------------------A---C------ATCATCAGTGGATGTCGGATATTTAGCAACAACAACAACAG---CAGCAACACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-ATAT-CATCAGGAATG-------GGAGATATTCATCGTCGTTTTTCGGTTTATTCCAGAATGC------AGCCCAAGCAGGTGTTTCAAAAACC---------AACAATTATGCCACGGAAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACC---------AACAATTATGCCACGG....2011.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC------AGCCCAAGCAGGTGTTTCAAAAA...............................2711.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCGGTTTATTCCAGAATGC------AGC...................................................2411.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC------AGCCCAAGCAGGTGTT......................................1911.0010000010
..............AGCGAATTGCCCATTATTGTTAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACC---------AACAATTATGCCACGGAAGC2411.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAACC---------AACAATTATGCCACGGAAGC2811.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCAAGCAGGTGTTTCAAA.................................2011.0011000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTATGCCACGGAAGC2011.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGGAATG-------GGAGATATT...........................................................................................2011.0010000100
.................GAATTGCCCATTATTGTTAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
...........GTTAGCGAATTGCCCATTATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAG---CAGCAACACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.............................................................................................................................2140.2510001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAG---CAGCAACACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.............................................................................................................................1950.2010001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAG---CAGC..........................................................................................................................................................................................................................................................................................................................................................18200.1020100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAG---CAGC..........................................................................................................................................................................................................................................................................................................................................................19200.0511000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAG---CAGCAACA......................................................................................................................................................................................................................................................................................................................................................21200.0511000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAACAG---CAGC..........................................................................................................................................................................................................................................................................................................................................................21200.0510100000

Generated: 05/18/2015 at 04:53 AM