ID:

dps_2520

 Coordinate:

XL_group1a:5332633-5332783 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.5 -7.1 -6.8

Flybase annnotation

exon [dpse_GLEANR_11434:4]; CDS [Dpse\GA23012-cds]; intron [Dpse\GA23012-in]

Repeatable elements

NameClassFamilyStrand
TRIMLINELOA+
mature
  1. 2:18131978-18132001 -
  2. 4_group4:4385070-4385093 -
  3. Unknown_group_167:49807-49830 +
  4. dps_2520  XL_group1a:5332727-5332750 +
star
  1. Unknown_group_85:24604-24625 +
  2. Unknown_group_306:11794-11815 +
  3. Unknown_group_303:3323-3344 +
  4. Unknown_group_88:21594-21615 +
  5. Unknown_group_16:2261-2282 +
  6. Unknown_group_312:2555-2576 +
  7. Unknown_group_421:357-378 +
  8. Unknown_group_40:2541-2562 +
  9. Unknown_group_40:5066-5087 +
  10. Unknown_group_44:5295-5316 +
  11. Unknown_group_231:28243-28264 +
  12. Unknown_singleton_1768:298-319 +
  13. dps_2520  XL_group1a:5332675-5332696 +
  14. Unknown_group_178:11358-11379 +
  15. Unknown_singleton_339:360-381 +
  16. Unknown_group_608:2413-2434 +
  17. Unknown_singleton_2787:1320-1341 +
  18. Unknown_singleton_962:1432-1453 +
  19. Unknown_group_145:4501-4522 +
  20. Unknown_singleton_3145:258-279 +
  21. Unknown_singleton_144:1312-1333 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGATAAATCCTGCCCCTCTGGCAAGAACAGAGCCCGGAAGAAACCTTAATGGTAGACTCTGAAACTGGGCGAACTCCGGAAAGCCACCCGGAGACTCTTCAATAAAGCTAAGGCTGAAAACGTTGAGCAAAACTGTCTGTCAACCTACAACAAAGAACTTAGGAAAGCCAAACGCGCCTCTTGACGTAAGTTCTTTCGAAGACTACACCCAGACTGGACTACTTGAAGAATGTCGGCCAATCTTGGACCAC
********************************************************************************************...............(((((.((......(((((.((........))))))).........))..)))))......*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 V112
male body		 GSM343916
embryo
 SRR902011
testis
.........CGGTCCCCCTGGCAAGAACAG............................................................................................................................................................................................................................. 21 3 6 54.17 325 313 0 0 12 0 0
.........CGGTCCCCCTGGCAAGAACA.............................................................................................................................................................................................................................. 20 3 11 13.91 153 148 0 0 5 0 0
...................................................................................................................................................................................................TCGAAGACTACACCCACACTGG.................................. 22 1 18 10.39 187 135 24 9 0 19 0
................................................................................................................................................CTACAACAAAGAACTTAGGAAAGC................................................................................... 24 0 4 6.50 26 14 8 0 0 0 4
............................................................................................GACTCTTCAATAAAGCTAAGGC......................................................................................................................................... 22 0 20 5.55 111 99 0 11 0 1 0
................................................................................................................................................CTACAACAAAGTACTTAGGAAAGC................................................................................... 24 1 4 2.25 9 7 0 2 0 0 0
...........................................................................................AGACTCTTCAATAAAGCTAAGGC......................................................................................................................................... 23 0 20 2.15 43 39 2 2 0 0 0
................................................................................................................................................CTACAACAAAGAACTTAGGAAAGCC.................................................................................. 25 0 4 1.50 6 2 0 2 0 0 2
............................................................................................GACTCTTCAATAAAGCTAAGGCT........................................................................................................................................ 23 0 20 1.45 29 29 0 0 0 0 0
............................................................................................GACTCTTCAATAAAGCTAAGGCTG....................................................................................................................................... 24 0 20 1.30 26 22 4 0 0 0 0
................................................................................................................................................CTACAACAAAGAACTTAGGAAAG.................................................................................... 23 0 4 1.25 5 3 1 0 1 0 0
................................................................................................................................................CTACAACAAAGAACTTAGGAAA..................................................................................... 22 0 5 1.00 5 1 4 0 0 0 0
...........GTCCCCCTGGCAAGAACA.............................................................................................................................................................................................................................. 18 2 20 0.95 19 19 0 0 0 0 0
...........................................................................................AGACTCTTCAATAAAGCTAAGG.......................................................................................................................................... 22 0 20 0.90 18 15 3 0 0 0 0
...................................................................................................................................................................................................TCGAAGACTACACCCACACTG................................... 21 1 20 0.75 15 12 3 0 0 0 0
................................................................................................................................................CTACAACAAAGTACTTAGGAAAGCC.................................................................................. 25 1 4 0.75 3 3 0 0 0 0 0
...........................................................................................AGACTCTTCAATGAAGCTAAGGC......................................................................................................................................... 23 1 20 0.70 14 10 4 0 0 0 0
................................................................................................................................................CTACAACAAAGTACTTAGGAAAGCCAAAC.............................................................................. 29 1 3 0.67 2 1 0 1 0 0 0
............................................................................................GACTCTTCAATAAAGCTAAGGCTGAAA.................................................................................................................................... 27 0 20 0.60 12 12 0 0 0 0 0
....................................................................................................................................................................................................CGAAGACTACACCCACACTGG.................................. 21 1 18 0.56 10 10 0 0 0 0 0
............................................................................................GACTCTTCAATGAAGCTAAGGCTGAAA.................................................................................................................................... 27 1 20 0.50 10 6 3 1 0 0 0
............................................................................................GACTCTTCAATGAAGCTAAGGCTG....................................................................................................................................... 24 1 20 0.50 10 6 4 0 0 0 0
................................................................................................................................................CTACAACAAAGTACTTAGGAAAGCCA................................................................................. 26 1 4 0.50 2 2 0 0 0 0 0
................................................................................................................................................CTACAACAAAGAACTTAGGAAAGCTA................................................................................. 26 1 4 0.50 2 2 0 0 0 0 0
..............................................................................................................................................................................................TTCTTTCGAAGACTACACCCAGACTGGAC................................ 29 0 2 0.50 1 1 0 0 0 0 0
...................................................................................................................................................................................................TCGAAGACTACACCCAGACTGGACT............................... 25 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................AAAGTTCTTTCGAAGACTACACCCAGAC..................................... 28 1 2 0.50 1 1 0 0 0 0 0
...................................................................................................................................................................................................TCGAAGACTACACCCAGACTGGAC................................ 24 0 2 0.50 1 1 0 0 0 0 0
................................................................................................................................................CTACAACAAAGTACTTAGGAAAG.................................................................................... 23 1 4 0.50 2 2 0 0 0 0 0
...................................................................................................................................................................................................TCGAAGACTACACACAAACTGG.................................. 22 2 2 0.50 1 0 0 0 0 1 0
................................................................................................................................................CTACAACAAAGAACTTAGGAAAGCCA................................................................................. 26 0 4 0.50 2 1 1 0 0 0 0
...................................................................................................................................................................................................TCGAAGACTACACCCACACTGGAC................................ 24 1 2 0.50 1 0 0 1 0 0 0
...................................................................................................................................................................................................TCGTAGACTACACCCACACTGGAC................................ 24 2 2 0.50 1 0 0 1 0 0 0
............................................................................................................TAAGGCTGAAAACGTTGAGCA.......................................................................................................................... 21 0 19 0.42 8 4 3 0 1 0 0
............................................................................................GACTCTTCAATAAAGCTAAGGCTGA...................................................................................................................................... 25 0 20 0.40 8 7 0 0 1 0 0
.............................................................................................ACTCTTCAATAAAGCTAAGGC......................................................................................................................................... 21 0 20 0.35 7 7 0 0 0 0 0
............................................................................................GACTCTTCAATGAAGCTAAGGCT........................................................................................................................................ 23 1 20 0.30 6 6 0 0 0 0 0
............................................................................................GACTCTTCAATAAAGCTAAAGCTG....................................................................................................................................... 24 1 20 0.25 5 5 0 0 0 0 0
................................................................................................................................................CTACAACAAAGAACTTAGGAAAGCCAAG............................................................................... 28 1 4 0.25 1 1 0 0 0 0 0
...........GTCCCCCTGGCAAGAACAG............................................................................................................................................................................................................................. 19 2 20 0.25 5 5 0 0 0 0 0
...........................................................................................................CTAAGGCTGAAAACGTTGAGCAAAAC...................................................................................................................... 26 0 18 0.22 4 0 4 0 0 0 0
........................................................................................................AAGCTAAGGCTGAAAACGTTGA............................................................................................................................. 22 0 18 0.22 4 0 4 0 0 0 0
..............................................................................................................AGGCTGAAAACGTTGAGCAAA........................................................................................................................ 21 0 19 0.21 4 2 2 0 0 0 0
...TAAATCCTGCCCCTCTGGCAAGACCA.............................................................................................................................................................................................................................. 26 1 5 0.20 1 1 0 0 0 0 0
............................................................................................GACTCTTCGATAGAGCTAAGGCT........................................................................................................................................ 23 2 20 0.20 4 4 0 0 0 0 0
............................................................................................GACTCTTCAATGAAGCTAAGG.......................................................................................................................................... 21 1 20 0.20 4 4 0 0 0 0 0
................................................................................................................................................CTACAACAAAGTACTTAGGAAAGA................................................................................... 24 2 5 0.20 1 1 0 0 0 0 0
............................................................................................GACTCTTCAATAGAGCTAAGGCTGAA..................................................................................................................................... 26 1 20 0.20 4 4 0 0 0 0 0
................................................................................................................................................CTACAACAAAGTACTTAGGAAAGAC.................................................................................. 25 2 5 0.20 1 0 0 1 0 0 0
............................................................................................GACTCTTCAATGAAGCTAAGGCTGAA..................................................................................................................................... 26 1 20 0.20 4 4 0 0 0 0 0
...TAAATCCTGCCCCTCTGGCAAGACA............................................................................................................................................................................................................................... 25 2 5 0.20 1 1 0 0 0 0 0
...TAAATCCTGCCCCTCTGGCAAGACC............................................................................................................................................................................................................................... 25 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TACAACAAAGAACTTAGGAAAGC................................................................................... 23 0 6 0.17 1 1 0 0 0 0 0
.........CGGCCCCCCTGGCAAGAACAG............................................................................................................................................................................................................................. 21 2 6 0.17 1 1 0 0 0 0 0
........CCGGTCCCCCTGGCAAGAACA.............................................................................................................................................................................................................................. 21 3 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................................TACAACAAAGAACTTAGGAAAGCCAAA............................................................................... 27 0 6 0.17 1 1 0 0 0 0 0
............................................................................................................................................................................................AGTTCTTTTGAAGACTTAACC.......................................... 21 3 6 0.17 1 1 0 0 0 0 0
...........................................................................................................CTAAGGCTGAAAACGTTGAGC........................................................................................................................... 21 0 19 0.16 3 3 0 0 0 0 0
............................................................................................GACTCTTCAATGAAGCTAAGGC......................................................................................................................................... 22 1 20 0.15 3 0 0 3 0 0 0
...................................................................................................................................................................................................TCGAAGACTACACCCACACT.................................... 20 1 20 0.15 3 3 0 0 0 0 0
...........................................................................................AGACTCTTCAATAAAGCTAAGGCTG....................................................................................................................................... 25 0 20 0.15 3 3 0 0 0 0 0
...........................................................................................AGACTCTTCAATAAAGCTAAGGCT........................................................................................................................................ 24 0 20 0.15 3 3 0 0 0 0 0
............................................................................................GACTCTTCGATAGAGCTAAGGC......................................................................................................................................... 22 2 20 0.15 3 3 0 0 0 0 0
............................................................................................GACTCTTCAATGAAGCTAAGGCTGA...................................................................................................................................... 25 1 20 0.15 3 3 0 0 0 0 0
................................................................................................................................................CTACAACAAAGAACTTAGTAAAGC................................................................................... 24 1 17 0.12 2 2 0 0 0 0 0
......................................................................................................TAAAGCTAAGGCTGAAAACGTTGAGCA.......................................................................................................................... 27 0 18 0.11 2 2 0 0 0 0 0
.............................................................................................................AAGGCTGAAAACGTTGAGCAAAAC...................................................................................................................... 24 0 18 0.11 2 0 2 0 0 0 0
........CCGGTCCCCCTGGCAAGAAC............................................................................................................................................................................................................................... 20 3 9 0.11 1 1 0 0 0 0 0
.............................................................................................................AAGGCTGAAAACGTTGAGCAAA........................................................................................................................ 22 0 18 0.11 2 1 1 0 0 0 0
........................................................................................................AAGCTAAGGCTGAAAACGTTG.............................................................................................................................. 21 0 18 0.11 2 2 0 0 0 0 0
.................................................................................................................CTGAAAACGTTGAGCAAAACT..................................................................................................................... 21 0 19 0.11 2 2 0 0 0 0 0
............................................................................................................TAAGGCTGAAAACGTTGAGC........................................................................................................................... 20 0 19 0.11 2 1 1 0 0 0 0
...........................................................................................................CTAAGGCTGAAAACGTTGAGCA.......................................................................................................................... 22 0 19 0.11 2 2 0 0 0 0 0
...........................................................................................AGACTCTTCAATACAGCTAAGGC......................................................................................................................................... 23 1 20 0.10 2 2 0 0 0 0 0
.......................................................................................................................................TCTGTCAACCTACAACAAAGA............................................................................................... 21 0 20 0.10 2 0 1 0 0 0 1
.............................................................................................................AAGGCTGAAAACGTTGAGC........................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................................................TCAACCTACAACAAAGAACTT........................................................................................... 21 0 20 0.10 2 1 1 0 0 0 0
....................................................................................................AATAAAGCTAAGGCTGAAAACG................................................................................................................................. 22 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................ATAAAGCTAAGGCTGAAAACG................................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0
......................................................................................CCCGGAGACTCTTGAATAAAGC............................................................................................................................................... 22 1 20 0.10 2 0 2 0 0 0 0
...........................................................................................................................................................TACTTAGGAAAGCCAAACGCGCCT........................................................................ 24 1 10 0.10 1 1 0 0 0 0 0
.............................................................................................ACTCTTCAATAAAGCTAAGG.......................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................AGACTCTTCAATGAAGCTAAGGCTG....................................................................................................................................... 25 1 20 0.10 2 1 0 1 0 0 0
...........................................................................................AGACTCTTCGATAGAGCTAAGGCTG....................................................................................................................................... 25 2 20 0.10 2 2 0 0 0 0 0
...................................................................................................CAATAAAGCTAAGGCTGAAA.................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0
.............................................................................................ACTCTTCAATGAAGCTAAGGCT........................................................................................................................................ 22 1 20 0.10 2 2 0 0 0 0 0
.............................................................................................................AAGGCTGAAAACGTTGAGCA.......................................................................................................................... 20 0 20 0.10 2 1 1 0 0 0 0
............................................................................................GACTCTTCAATAAAGCTAAAGC......................................................................................................................................... 22 1 20 0.10 2 2 0 0 0 0 0
..............................................................................................CTCTTCAATAAAGCTAAGGCT........................................................................................................................................ 21 0 20 0.10 2 2 0 0 0 0 0
.............................................................................................ACTCTTCAATGAAGCTAAGGCTG....................................................................................................................................... 23 1 20 0.10 2 2 0 0 0 0 0
.......................................................................................................................................................AAAGAACTAAGGAAAGCCAAACGCGC.......................................................................... 26 1 20 0.10 2 0 2 0 0 0 0
............................................................................................GACTCTTCAATAAAGCTAAGGCTGAAAA................................................................................................................................... 28 0 20 0.10 2 1 1 0 0 0 0
.............................................................................................ACTCTTCAATAAAGCTAAGGCTG....................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0
..........TGCCCCTCTGGCAAGAACAG............................................................................................................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0 0
..............................................................................................CTCTTCAATAAAGCTAAGGCTG....................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
..ATAAATCCTGCCCCTCTGGC..................................................................................................................................................................................................................................... 20 0 12 0.08 1 1 0 0 0 0 0
...TAAATCCTGCCCCTCTGGCA.................................................................................................................................................................................................................................... 20 0 12 0.08 1 1 0 0 0 0 0
...TAAATCCTGCCCCTCTGGCAAG.................................................................................................................................................................................................................................. 22 0 12 0.08 1 1 0 0 0 0 0
.GATAAATCCTACCCCTCTGGCAAG.................................................................................................................................................................................................................................. 24 1 12 0.08 1 1 0 0 0 0 0
..ATAAATCCTGCCCCTCTGGCAA................................................................................................................................................................................................................................... 22 0 12 0.08 1 1 0 0 0 0 0
CGATAAATCCTGCCCCTCTG....................................................................................................................................................................................................................................... 20 0 15 0.07 1 0 0 0 0 1 0
.......................................................................................................................................TCTGTCAACCTACAACAAAGAACTTAG......................................................................................... 27 0 17 0.06 1 1 0 0 0 0 0
................................................................................................................................................CTACAACAAAGAACTTAGTAAAGCC.................................................................................. 25 1 17 0.06 1 0 1 0 0 0 0
..........................................................................................................GCTAAGGCTGAAAACGTTGAACAAAAC...................................................................................................................... 27 1 17 0.06 1 1 0 0 0 0 0
......................................................................................................TAAAGCTAAGGCTGAAAACGTTGAGCAA......................................................................................................................... 28 0 17 0.06 1 1 0 0 0 0 0
................................................................................................................................................CTACAACAAAGAACTTAGTAAAGCCA................................................................................. 26 1 17 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................................................TCGTAGACTACACCCACACTGG.................................. 22 2 18 0.06 1 0 0 1 0 0 0
.....................................................................................................................................................................................................GAAGACTACACCCACACTGG.................................. 20 1 18 0.06 1 1 0 0 0 0 0
.........................................................................................................AGCTAAGGCTGAAAACGTTG.............................................................................................................................. 20 0 18 0.06 1 1 0 0 0 0 0
......................................................................................................TGAAGCTAAGGCTGAAAACGTTGAGC........................................................................................................................... 26 1 18 0.06 1 1 0 0 0 0 0
........................................................................................................AAGCTAAGGCTGAAAACGTTGAG............................................................................................................................ 23 0 18 0.06 1 0 1 0 0 0 0
....................................................................................................AATAAAGCTAAGGCTGAAAACGTTGA............................................................................................................................. 26 0 18 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................................................TCGAAGACTACACCCTCACTGG.................................. 22 2 18 0.06 1 0 0 1 0 0 0
.......................................................................................................AAAGCTAAGGCTGAAAACGTTG.............................................................................................................................. 22 0 18 0.06 1 1 0 0 0 0 0
.......................................................................................................................................TCTGTCAACCTACAACAAAGAACTTA.......................................................................................... 26 0 18 0.06 1 1 0 0 0 0 0
......................................................................................................TAAAGCTAAGGCTGAAAACGTTGAGC........................................................................................................................... 26 0 18 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................................................TCGAAGACTCCACCCACACTGG.................................. 22 2 18 0.06 1 0 0 0 0 1 0
.....................................................................................................ATAGAGCTAAGGCTGAAAACGTTGAGC........................................................................................................................... 27 1 18 0.06 1 1 0 0 0 0 0
.............................................................................................................AAGGCTGAAAACGTTGAGCAA......................................................................................................................... 21 0 18 0.06 1 1 0 0 0 0 0
......................................................................................................TAAAGCTAAGGCTGAAAACGTTG.............................................................................................................................. 23 0 18 0.06 1 1 0 0 0 0 0
.......................................................................................................AAAGCTAAGGCTGAAAACGTT............................................................................................................................... 21 0 18 0.06 1 1 0 0 0 0 0
...........................................................................................................CTAAGGCTGAAAACGTTGAGCAAA........................................................................................................................ 24 0 18 0.06 1 0 1 0 0 0 0
...................................................................................................................................................................................................TCGAAGACTACACCCGCACTGG.................................. 22 2 18 0.06 1 1 0 0 0 0 0
...................................................................................................................................................................................................TGGAAGACTACACCCACACTGG.................................. 22 2 18 0.06 1 1 0 0 0 0 0
..............................................................................................................AGGCTGAAAACGTTGAGCAA......................................................................................................................... 20 0 19 0.05 1 1 0 0 0 0 0
..................................................................................................................TGAAAACGTTGAGCAAAACTG.................................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................TCGAAGACTACACCCACACTGGTC................................ 24 2 19 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................................TCCAAGACTACACCCACACTGG.................................. 22 2 19 0.05 1 0 0 1 0 0 0
..........................................................................................................................................GTCAAGCTACAACAAAGTACTTA.......................................................................................... 23 2 19 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................................TTCGAAGACTACACCCACACTGGGC................................ 25 2 19 0.05 1 1 0 0 0 0 0
......................................................................................................................................GTCTGTCAACCTACAACAAAGAACTT........................................................................................... 26 0 19 0.05 1 1 0 0 0 0 0
......................................................................................................TAAAGCTGAGGCTGAAGACGTTG.............................................................................................................................. 23 2 19 0.05 1 1 0 0 0 0 0
...................................................................................................................GAAAACGTTGAGCAAAACTG.................................................................................................................... 20 0 19 0.05 1 1 0 0 0 0 0
..................................................................................................................TGAAAACGTTGAGCAAAACT..................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
.................................CCGGAAGAAACCTGAATGGTA..................................................................................................................................................................................................... 21 1 20 0.05 1 0 0 0 0 0 1
....................................................................................................AATAAAGCTAAGGCTGAAAACGT................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................TTCAATAAAGCTGAGGCTGAAAACGT................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
.....................................................................................CCCCGGAGACTCTTCAATACAGCTAAGG.......................................................................................................................................... 28 2 20 0.05 1 1 0 0 0 0 0
....................................................................................................AATAAAGCTAAGGCTGAAGACGT................................................................................................................................ 23 1 20 0.05 1 0 0 0 0 0 1
...................................................................................................................................................................................................TCGAAGACTACACCCACACTA................................... 21 2 20 0.05 1 1 0 0 0 0 0
.......................................................................................................CACGCTAAGGCTGCAAACGT................................................................................................................................ 20 3 20 0.05 1 1 0 0 0 0 0
CGATAAATCCTGCCCCTCT........................................................................................................................................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................TGTCAACCTACAACAAAGAACT............................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................AGACTCTTCGATAGAGCTAAGG.......................................................................................................................................... 22 2 20 0.05 1 0 0 1 0 0 0
............................................................................................GACTCTTCAATAGAGCTAAGGCTGA...................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................GGACTCTTCAATAAAGCTAAGGC......................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
.........................................................................................AGAGACTCTTCAATAAAGCTAAGGCT........................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................TCGAAGACTACATCCACACTGG.................................. 22 2 20 0.05 1 0 1 0 0 0 0
............................................................................................GACTCTTGAATAAAGCTAAGGCT........................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................CAACCTACAACAACGAACTTA.......................................................................................... 21 1 20 0.05 1 0 0 0 0 1 0
.......................................................................................................................................................AAAGAACTAAGGAAAGCCAAACGC............................................................................ 24 1 20 0.05 1 0 1 0 0 0 0
............................................................................................GACTCTTCAATTAAGCTAAGGC......................................................................................................................................... 22 1 20 0.05 1 0 0 0 0 0 1
..........................................................................................GAGACTCTTCAATGAAGCTAAG........................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................AGACTCTTCAATAGAGCTAAGGCT........................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................CTGTCAACCTACAACAAAGA............................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
................................................................................................CTTCAATAAAGCTAAGGC......................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
............................................................................................GACTCTTGAATAAAGCTAAGGC......................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................................................................CGAAGACTACACCCACACT.................................... 19 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................ACTCTTCAATAAAGCTAAAGCTG....................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................GTCAACCTACAACAAAGAACT............................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................ACTCTTCAATGAAGCTAAGGC......................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
..........TGCCCCTCTGGCAAGAACAGAG........................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
............TCCCCCTGGCAAGAACAG............................................................................................................................................................................................................................. 18 2 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................TGTCAACCTACAACAAAGAAC............................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................AGACTCTTCAATAAAGCTAAGGA......................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................ACTCTTCAATAGAGCTAAGGCTGAAA.................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
............................................................................................GACTCTTCAATAAAGCTAAGGCG........................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................CTGGGGCTGAAAACGTTGAGC........................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0
............................................................................................GACTCTTCAATAAAGCTAAGGCA........................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0
....................................................................................................GATAGAGCTAAGGCTGAAAACG................................................................................................................................. 22 2 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................CCTACAACAAAGAACTTAG......................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................AGGCTGAAAACGTTGAGCA.......................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................TAAAGCTAAGGCTGAAAACG................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
...........GTCCCCCTGGCAAGAACAGA............................................................................................................................................................................................................................ 20 2 20 0.05 1 1 0 0 0 0 0
............................................................................................GACTCTTCAATAGAGCTAAGGCTGAAA.................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
............................................................................................GACCCTTCAATAAAGCTAAGGC......................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
............................................................................................GACTCTTCAATGAAGCTAAGGCTGAAAA................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................AACCTACAACGGGGAACTTAG......................................................................................... 21 3 20 0.05 1 0 0 0 0 0 1
............................................................................................GACTCTTCAATACAGCTAAGGC......................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0
..............................................................................................CTCTTCAATAAAGCTAAGGC......................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................ACTCTTCAATAAAGCTAAGGCA........................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

GCTATTTAGGACGGGGAGACCGTTCTTGTCTCGGGCCTTCTTTGGAATTACCATCTGAGACTTTGACCCGCTTGAGGCCTTTCGGTGGGCCTCTGAGAAGTTATTTCGATTCCGACTTTTGCAACTCGTTTTGACAGACAGTTGGATGTTGTTTCTTGAATCCTTTCGGTTTGCGCGGAGAACTGCATTCAAGAAAGCTTCTGATGTGGGTCTGACCTGATGAACTTCTTACAGCCGGTTAGAACCTGGTG
***********************************************************************************...............(((((.((......(((((.((........))))))).........))..)))))......******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 M059
embryo
 GSM343916
embryo
 M062
head
 M022
male body		 GSM444067
head
.....................................................................................................................................ACAGACAGTTGGATGTTGTTT................................................................................................. 21 0 1 6.00 6 6 0 0 0 0 0 0 0 0
.........GCCAGGGGGACCGTTCTTGTC............................................................................................................................................................................................................................. 21 3 6 3.00 18 15 0 0 3 0 0 0 0 0
..............................................................................................................TCCGACTTTTGCAACTCGTTTTGAT.................................................................................................................... 25 1 19 2.16 41 27 2 0 0 10 1 1 0 0
.................................................................................................................................TTTGACAGACAGTTGGATGTTGTTT................................................................................................. 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0
..................................................................................................................................TTGACAGACAGTTGGATGTTGTTT................................................................................................. 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0
....................................................................................................................................AACAGACAGTTGGATGTTGTTT................................................................................................. 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0
.........GCCAGGGGGACCGTTCTTGT.............................................................................................................................................................................................................................. 20 3 11 1.18 13 13 0 0 0 0 0 0 0 0
............................................................................................................................................GTTGGATGTTGTTTCTTGAAT.......................................................................................... 21 0 19 1.05 20 4 14 1 1 0 0 0 0 0
..........................................................................................................CGATTCCGACTTTTGCAACTCGT.......................................................................................................................... 23 0 18 1.00 18 18 0 0 0 0 0 0 0 0
................................................................................TTCGGTGGGCCTCTGAGAAGTT..................................................................................................................................................... 22 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...................................................................................GGTGGGCCTCTGAGAAGTT..................................................................................................................................................... 19 0 2 1.00 2 1 0 1 0 0 0 0 0 0
...................................................................................................................................TGACAGACAGTTGGATGTTGTTT................................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........CAGGGGGACCGTTCTTGTC............................................................................................................................................................................................................................. 19 2 20 1.00 20 20 0 0 0 0 0 0 0 0
..................................................................................CGGTGGGCCTCTGAGAAGTT..................................................................................................................................................... 20 0 2 1.00 2 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................AACTGCATTCAAGAAAGCTTCTGAT.............................................. 25 0 2 1.00 2 0 0 2 0 0 0 0 0 0
......................................................................................................................................CAGACAGTTGGATGTTGTTT................................................................................................. 20 0 20 0.95 19 11 0 6 0 2 0 0 0 0
..........CCAGGGGGACCGTTCTTGTC............................................................................................................................................................................................................................. 20 3 20 0.85 17 11 0 0 5 0 0 0 1 0
........................................................................................................TTCGATTCCGACTTTTGCAACTCGT.......................................................................................................................... 25 0 18 0.83 15 14 1 0 0 0 0 0 0 0
.......................................................................................................................................AGACAGTTGGATGTTGTTTCT............................................................................................... 21 0 20 0.80 16 10 0 5 1 0 0 0 0 0
...................................................................................................................................................GTTGTTTCATGAATCCTTTCGGTT................................................................................ 24 1 7 0.71 5 2 3 0 0 0 0 0 0 0
..........................................................................................................................................CAGTTGGATGTTGTTTCTTGA............................................................................................ 21 0 20 0.70 14 6 6 2 0 0 0 0 0 0
.......................................................................................................................................AGACAGTTGGATGTTGTTTCTTGAAT.......................................................................................... 26 0 18 0.67 12 6 3 3 0 0 0 0 0 0
...............................................................................................................CCGACTTTTGCAACTCGTTTTGAT.................................................................................................................... 24 1 19 0.58 11 8 0 0 0 3 0 0 0 0
......................................................................................................................................CAGACAGTTGGATGTTGTTTCTTGAAT.......................................................................................... 27 0 18 0.56 10 6 2 1 1 0 0 0 0 0
............................................................................................CTGAGAAGTTATTTCGATTCCGACT...................................................................................................................................... 25 0 20 0.55 11 9 0 0 1 1 0 0 0 0
..........CCAGGGGGACCGTTCTTGT.............................................................................................................................................................................................................................. 19 3 20 0.55 11 11 0 0 0 0 0 0 0 0
............AGGGGGACCGTTCTTGTC............................................................................................................................................................................................................................. 18 2 20 0.55 11 11 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................ACTGCATTCAAGAAAGCTTCTGAT.............................................. 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0
................................................................................................................................................................................GGAGAACTGCATTCAAGAAAGCTTCTGA............................................... 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................................................GGTGGGCCTCTGAGAAGTTAT................................................................................................................................................... 21 0 2 0.50 1 0 0 0 1 0 0 0 0 0
.................................................................................TCGGTGGGCCTCTGAGAAGTT..................................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.................................................................................TCGGTGGGCCTCTGAGAAGTTATTTCGA.............................................................................................................................................. 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................................................................TTTCGGTGGGCCTCTGGGAAGT...................................................................................................................................................... 22 1 2 0.50 1 0 0 0 0 0 1 0 0 0
................................................................................TTCGGTGGGCCTCTGAGAAGTTATT.................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................AGTTGGATGTTGTTTCTTGAA........................................................................................... 21 0 20 0.45 9 4 5 0 0 0 0 0 0 0
...........................................................................................................................................AGTTGGATGTTGTTTCTTGA............................................................................................ 20 0 20 0.45 9 3 4 2 0 0 0 0 0 0
...................................................................................................................................................GTTGTTTCATGAATCCTTTCGGT................................................................................. 23 1 7 0.43 3 3 0 0 0 0 0 0 0 0
...................................................................................................................................................GTTGTTTCTTGAATCCTTTCGGTT................................................................................ 24 0 7 0.43 3 2 0 1 0 0 0 0 0 0
........................................................................................................................................GACAGTTGGATGTTGTTTCTTGAAT.......................................................................................... 25 0 19 0.37 7 1 4 2 0 0 0 0 0 0
............................................................................................CTGAGAAGCTATCTCGATTCCGACT...................................................................................................................................... 25 2 20 0.35 7 6 0 0 0 1 0 0 0 0
...................................................................................................................................AAAAAGACAGTTGGATGTTGTTT................................................................................................. 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0
................................................................................TGCGGTGGGCCTCTGAGGAGTT..................................................................................................................................................... 22 2 3 0.33 1 0 0 0 0 0 1 0 0 0
.............................................................................................................................................TTGGATGTTGTTTCTTGAATC......................................................................................... 21 0 19 0.32 6 2 1 1 2 0 0 0 0 0
...........CGGGGAGACCGTTCTTGTCT............................................................................................................................................................................................................................ 20 0 20 0.30 6 1 4 0 0 0 1 0 0 0
...........CAGGGGGACCGTTCTTGT.............................................................................................................................................................................................................................. 18 2 20 0.30 6 6 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGTTTCTTGAATCCTTTCGGTT................................................................................ 25 0 7 0.29 2 0 0 2 0 0 0 0 0 0
..................................................................................................................................................TGTTGTTTCTTGAATCCTTTCGGT................................................................................. 24 0 7 0.29 2 0 0 2 0 0 0 0 0 0
GCTATTTAGGACGGGGAGACCGTT................................................................................................................................................................................................................................... 24 0 11 0.27 3 3 0 0 0 0 0 0 0 0
...........................................................................................................................................AGTTGGATGTTGTTTCTTGAAT.......................................................................................... 22 0 19 0.26 5 1 4 0 0 0 0 0 0 0
..........................................................................................................................................CAGTTCGATGTTGTTTCATGAATCCGT...................................................................................... 27 3 4 0.25 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................CGATGTTGTTTCATGAATCCTTTCGG.................................................................................. 26 2 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................CAGACAGTTGGATGTTGTTTCTT.............................................................................................. 23 0 20 0.25 5 1 4 0 0 0 0 0 0 0
..........................................................................................................................................CAGTTGGATGTTGTTTCTTG............................................................................................. 20 0 20 0.25 5 1 2 2 0 0 0 0 0 0
................................................................................................................................................GATGTTGTTTCTTGAATCCTTTCGGT................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................GTTGGATGTTGTTTCTTGAA........................................................................................... 20 0 20 0.25 5 2 3 0 0 0 0 0 0 0
................................................................................................................................................GATGTTGTTTCATGAATCCTTTCGGTT................................................................................ 27 1 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................CAGACAGTTGGATGTTGTTTC................................................................................................ 21 0 20 0.25 5 2 3 0 0 0 0 0 0 0
.........................................................................................................TCGATTCCGACTTTTGCAACTCGT.......................................................................................................................... 24 0 18 0.22 4 4 0 0 0 0 0 0 0 0
..............................................................................................................CCCGACTTTTGCAACTCGTTTTGAT.................................................................................................................... 25 2 19 0.21 4 1 0 0 0 3 0 0 0 0
................................................................................................................CGACTTTTGCAACTCGTTTTGAT.................................................................................................................... 23 1 19 0.21 4 2 0 0 0 1 1 0 0 0
......................................................................................................................................................GTTTCTTGAATCCTTTCGGTTTGCGC........................................................................... 26 0 5 0.20 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................TCGGTTTGAGCGGTGGACTG.................................................................. 20 3 20 0.20 4 4 0 0 0 0 0 0 0 0
.....................................................................................TGAGCCTCTGAGAAGTTATT.................................................................................................................................................. 20 1 5 0.20 1 1 0 0 0 0 0 0 0 0
..........TCAGGGGGACCGTTCTTGT.............................................................................................................................................................................................................................. 19 3 20 0.20 4 4 0 0 0 0 0 0 0 0
.....................................................................................................................................AAAAACAGTTGGATGTTGTTT................................................................................................. 21 2 5 0.20 1 1 0 0 0 0 0 0 0 0
.......................................................................................GGCCTCTGAGAAGTTATTTCGAT............................................................................................................................................. 23 0 20 0.20 4 0 2 2 0 0 0 0 0 0
........................................................................................................................................GACAGTTGGATGTTGTTTCTT.............................................................................................. 21 0 20 0.20 4 3 0 1 0 0 0 0 0 0
.............................................................................................................................................TTGGATGTTGTTTCTTGAAT.......................................................................................... 20 0 20 0.20 4 0 2 1 1 0 0 0 0 0
..................................................................................................................................TTGTCAGACAGTTGGATGTTGTT.................................................................................................. 23 1 5 0.20 1 1 0 0 0 0 0 0 0 0
...........CAGGGGGACCGTTCTTGTCA............................................................................................................................................................................................................................ 20 3 20 0.20 4 0 0 0 4 0 0 0 0 0
........................................................................................................................................GACAGTTGGATGTTGTTTCTTGAA........................................................................................... 24 0 20 0.20 4 0 4 0 0 0 0 0 0 0
......................................................................................................ATCTCGATTCCGACTTTTGCAACTCGT.......................................................................................................................... 27 1 18 0.17 3 2 1 0 0 0 0 0 0 0
.CTATTTAGGATGGGGAGACCGTT................................................................................................................................................................................................................................... 23 1 12 0.17 2 1 0 0 0 0 1 0 0 0
.............................................................................................................................................TCAGATGTTGTTTCATGAATCCTT...................................................................................... 24 3 6 0.17 1 0 1 0 0 0 0 0 0 0
.....................................................................................................TATTTCGATTCCGACTTTTGCAACT............................................................................................................................. 25 0 18 0.17 3 3 0 0 0 0 0 0 0 0
.................................................................................................................................................ATGTTGTTTCTTGAATCCTTTCGGTT................................................................................ 26 0 6 0.17 1 0 0 1 0 0 0 0 0 0
........................................................................................................CTCGATTCCGACTTTTGCAACTCGT.......................................................................................................................... 25 1 18 0.17 3 2 0 0 0 1 0 0 0 0
...........................................................................................................GATTCCGACTTTTGCAACTCGT.......................................................................................................................... 22 0 19 0.16 3 1 1 1 0 0 0 0 0 0
............................................................................................CTGAGAAGTTATCTCGATTCCGACT...................................................................................................................................... 25 1 20 0.15 3 3 0 0 0 0 0 0 0 0
.......................................................................................................................................AGACAGTTGGATGTTGTTTC................................................................................................ 20 0 20 0.15 3 3 0 0 0 0 0 0 0 0
........................................................................................................................................GACAGTTGGATGTTGTTTCT............................................................................................... 20 0 20 0.15 3 1 1 1 0 0 0 0 0 0
.................................................................................................................GACTTTTGCAACTCGTTTTGAT.................................................................................................................... 22 1 20 0.15 3 3 0 0 0 0 0 0 0 0
..........................................................................................................................................................CTTGAATCCTTTCGGTTTGCGCG.......................................................................... 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................TGTTGTTTCATGAATCCTTTCGGT................................................................................. 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................TTGTTTCTTGAATCCTTTCGGTT................................................................................ 23 0 8 0.13 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................GTTGTTTCATGAATCCTTTCGG.................................................................................. 22 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................TCGGTGGGCTTCTGCGAAGTT..................................................................................................................................................... 21 2 8 0.13 1 0 0 0 0 0 1 0 0 0
...................................................................................................................................................GTTGTTTCTTGAATCCTTTCGG.................................................................................. 22 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..........................................................................................................CGATTCCGACTTTTGCAACTCGTT......................................................................................................................... 24 0 17 0.12 2 2 0 0 0 0 0 0 0 0
..........................................................................................................CGATTCCGACTTTTGCAACTCGTTTT....................................................................................................................... 26 0 17 0.12 2 2 0 0 0 0 0 0 0 0
..........................................................................................................CGATTCCGACTTTTGCAACTCGTTT........................................................................................................................ 25 0 17 0.12 2 1 0 0 0 0 1 0 0 0
......................................................................................................ATTTCGATTCCGACTTTTGCAACTCGTT......................................................................................................................... 28 0 17 0.12 2 2 0 0 0 0 0 0 0 0
...............................................................................................................CCGACTTTTGCAACTCGTTTTGAC.................................................................................................................... 24 0 17 0.12 2 2 0 0 0 0 0 0 0 0
.......................................................................................................TTTCGATTCCGACTTTTGCAACTCGTTT........................................................................................................................ 28 0 17 0.12 2 2 0 0 0 0 0 0 0 0
...........................................................................................................GATTCCGACTTTTGCAACTCGTTT........................................................................................................................ 24 0 18 0.11 2 0 0 2 0 0 0 0 0 0
.............................................................................................................TTCCGACTTTTGCAACTCGTT......................................................................................................................... 21 0 18 0.11 2 2 0 0 0 0 0 0 0 0
........................................................................................................TTCGATTCCGACTTTTGCAAC.............................................................................................................................. 21 0 18 0.11 2 2 0 0 0 0 0 0 0 0
..............................................................................................................TCCGACTTTTGCAACTCGTTTTG...................................................................................................................... 23 0 18 0.11 2 2 0 0 0 0 0 0 0 0
...............................................................................................................CCGACTTTTGCAACTCGTTTT....................................................................................................................... 21 0 18 0.11 2 2 0 0 0 0 0 0 0 0
......................................................................................................ATTTCGATTCCGACTTTTGCAACTCGT.......................................................................................................................... 27 0 18 0.11 2 2 0 0 0 0 0 0 0 0
...............................................................................................................CCGACTTTTGCAACTCGTTTTGA..................................................................................................................... 23 0 18 0.11 2 2 0 0 0 0 0 0 0 0
.......................................................................................................TCTCGATTCCGACTTTTGCAACTCGT.......................................................................................................................... 26 1 18 0.11 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................................ACAGTTGGATGTTGTTTCTTGAAT.......................................................................................... 24 0 19 0.11 2 1 1 0 0 0 0 0 0 0
..................................................................................................................ACTTTTGCAACTCGTTTTGAC.................................................................................................................... 21 0 19 0.11 2 2 0 0 0 0 0 0 0 0
.............................................................................................................TTCCGACTTTTGCAACTCGTTTTGAT.................................................................................................................... 26 1 19 0.11 2 1 0 0 0 1 0 0 0 0
.........................................................................................................................................ACAGTTGGATGTTGTTTCTT.............................................................................................. 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................GACAGTTGGATGTTGTTT................................................................................................. 18 0 20 0.10 2 1 1 0 0 0 0 0 0 0
.......................................................................................GGCCTCTGAGAAGTTATTTCGATT............................................................................................................................................ 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..............................................................................................GAGAAGTTATTTCGATTCCGACT...................................................................................................................................... 23 0 20 0.10 2 0 2 0 0 0 0 0 0 0
............TGGGGGACCGTTCTTGTC............................................................................................................................................................................................................................. 18 2 20 0.10 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................TGGATGTTGTTTCTTGAAT.......................................................................................... 19 0 20 0.10 2 1 0 0 0 1 0 0 0 0
...................................................................................................GTTATTTCGATTCCGACTTTTGC................................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................GTTGGATGTTGTTTCTTGA............................................................................................ 19 0 20 0.10 2 1 0 0 1 0 0 0 0 0
.........................................................................................CCTCTGAGAAGTTATTTCGAT............................................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.........................................................................................CCTCTGAGAAGTTATTTCGATTCC.......................................................................................................................................... 24 0 20 0.10 2 0 2 0 0 0 0 0 0 0
............................................................................................CTGAGAAGCTATCTCGATTCCGACTTT.................................................................................................................................... 27 2 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................TGTTGGATGTTGTTTCTTGAA........................................................................................... 21 1 20 0.10 2 0 0 2 0 0 0 0 0 0
.........................................................................................................................................ACAGTTGGATGTTGTTTCTTG............................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........ACGGGGAGACCGTTCTTGTC............................................................................................................................................................................................................................. 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................................................................TTCCGACTTTTGCAACTCGT.......................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................TGGATGTTGTTTCTTGA............................................................................................ 17 0 20 0.10 2 0 2 0 0 0 0 0 0 0
GCTACTTAGGACGGGGAGACCGTT................................................................................................................................................................................................................................... 24 1 11 0.09 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................ATGAATCCTTTCGGTTTGCGCGG......................................................................... 23 1 11 0.09 1 0 0 1 0 0 0 0 0 0
GCTATTTAGGACGGGGAGACCGT.................................................................................................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0 0 0 0 0 0
GCAATTTAGGACGGGGAGACCGTT................................................................................................................................................................................................................................... 24 1 11 0.09 1 1 0 0 0 0 0 0 0 0
GCTATTTAGGATGGGGAGACCGTT................................................................................................................................................................................................................................... 24 1 12 0.08 1 1 0 0 0 0 0 0 0 0
.AAATTTAGGACGGGGAGACCGT.................................................................................................................................................................................................................................... 22 2 12 0.08 1 1 0 0 0 0 0 0 0 0
GCTATTTAGGACGGGGAGACC...................................................................................................................................................................................................................................... 21 0 14 0.07 1 1 0 0 0 0 0 0 0 0
.....TTAGGATGGGGAGACCGTT................................................................................................................................................................................................................................... 19 1 14 0.07 1 1 0 0 0 0 0 0 0 0
..........................................................................................................CGATTCCGACTTTTGCAACTCGTTTTG...................................................................................................................... 27 0 17 0.06 1 0 0 0 0 1 0 0 0 0
.........................................................................................................TCGATTCCGACTTTTGCAACTCGTT......................................................................................................................... 25 0 17 0.06 1 1 0 0 0 0 0 0 0 0
.........................................................................................................TCGATTCCGACTTTTGCAACTCGTTTT....................................................................................................................... 27 0 17 0.06 1 1 0 0 0 0 0 0 0 0
..............................................................................................................CCCGACTTTTGCAACTCGTTTTGAC.................................................................................................................... 25 1 17 0.06 1 1 0 0 0 0 0 0 0 0
.........................................................................................................TCGATTCCGACTTTTGCAACTCGTTT........................................................................................................................ 26 0 17 0.06 1 1 0 0 0 0 0 0 0 0
................................................................................................................CGACTTTTGCAACTCGTTTTGAC.................................................................................................................... 23 0 17 0.06 1 1 0 0 0 0 0 0 0 0
.........................................................................................................ACGATTCCGACTTTTGCAACTCGT.......................................................................................................................... 24 1 18 0.06 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................CAGACAGTTCGATGTTGTTTCATGAAT.......................................................................................... 27 2 18 0.06 1 0 0 0 0 1 0 0 0 0
....................................................................................................CTATCTCGATTCCGACTTTTGCAACT............................................................................................................................. 26 2 18 0.06 1 0 0 0 0 1 0 0 0 0
......................................................................................................ATCTCGATTCCGACTTTTGCAACTCG........................................................................................................................... 26 1 18 0.06 1 1 0 0 0 0 0 0 0 0
.......................................................................................................TTTCGATTCCGACTTTTGCAACTCGT.......................................................................................................................... 26 0 18 0.06 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TTCCGACTTTTGCAACTCGTTTTGA..................................................................................................................... 25 0 18 0.06 1 1 0 0 0 0 0 0 0 0
...........................................................................................................GATTCCGACTTTTGCAACTCGTTTT....................................................................................................................... 25 0 18 0.06 1 0 1 0 0 0 0 0 0 0
........................................................................................................TTCGATTCCGACTTTTGCAA............................................................................................................................... 20 0 18 0.06 1 1 0 0 0 0 0 0 0 0
...........................................................................................................GATTCCGACTTTTGCAACTCGTT......................................................................................................................... 23 0 18 0.06 1 1 0 0 0 0 0 0 0 0
....................................................................................................CTATCTCGATTCCGACTTTTGCAAC.............................................................................................................................. 25 2 18 0.06 1 1 0 0 0 0 0 0 0 0
........................................................................................................CTCGATTCCGACTTTTGCAACTCG........................................................................................................................... 24 1 18 0.06 1 1 0 0 0 0 0 0 0 0
..............................................................................................................ACCGACTTTTGCAACTCGTTTTGA..................................................................................................................... 24 1 18 0.06 1 1 0 0 0 0 0 0 0 0
..........................................................................................................CGATTCCGACTTCTGCAACTCGT.......................................................................................................................... 23 1 18 0.06 1 1 0 0 0 0 0 0 0 0
........................................................................................................TTCGATTCCGACTTTTGCAACTCG........................................................................................................................... 24 0 18 0.06 1 1 0 0 0 0 0 0 0 0
............................................................................................................ATTCCGACTTTTGCAACTCGTTT........................................................................................................................ 23 0 18 0.06 1 1 0 0 0 0 0 0 0 0
.............................................................................................................AACCGACTTTTGCAACTCGTTTTGAT.................................................................................................................... 26 3 19 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................CAGACAGTTGGATGTTGTTTCTTGAA........................................................................................... 26 0 19 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................CAGACAGTTGGATGTTGTTTCTTGA............................................................................................ 25 0 19 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TTCCGACTTTTGGAACTCGTT......................................................................................................................... 21 1 19 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................CAGTTGGATGTTGTTTCTTGAATA......................................................................................... 24 1 19 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................CGACTTTTGCAACTCGTTT........................................................................................................................ 19 0 19 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................CGACTTTTGCAACTCGTTTTTAT.................................................................................................................... 23 2 19 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................ATTCCGACTTTTGCAACTCGT.......................................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................TTGGATGTTGTTTGTTGAATC......................................................................................... 21 1 19 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................CCGACTTTTGCAACTCGTTT........................................................................................................................ 20 0 19 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................GACTTTTGCAACTCGTTTTGA..................................................................................................................... 21 0 19 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................TCCGACTTTTGCAACTCGTTTAGAT.................................................................................................................... 25 2 19 0.05 1 0 0 0 0 1 0 0 0 0
............................................................................................................ATTCCGACTTTTGCAACTCGTTTTGAT.................................................................................................................... 27 1 19 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................ACCGACTTTTGCAACTCGTTTTGAT.................................................................................................................... 25 2 19 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................CTGAGGAGTTATTTCGATTCCGACTTT.................................................................................................................................... 27 1 20 0.05 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................AGACAGTTGGATGTTGTTTCTTG............................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................GGCCTCTGAGAAGCTATCTCGATTC........................................................................................................................................... 25 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................ACAGTTGGATGTTGTTTC................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................AAGACAGTTGGATGTTGTTTCTTGAA........................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........TCAGGGGGACCGTTCTTGTC............................................................................................................................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................................................TGAGAAGCTATCTCGATTCCGACTTT.................................................................................................................................... 26 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................ACAGTTGGATTTTGTTTCTTGAAT.......................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........ACGGGGAGACCGTTCTTGTCT............................................................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 0 0 0 1
................................................................................................GAAGTTATCTCGATTCCGACTT..................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................GTTGGATGTTGTTTGTTGA............................................................................................ 19 1 20 0.05 1 0 0 0 1 0 0 0 0 0
.......................................................................................GGCCTCTGAGAAGCTATCTCGAT............................................................................................................................................. 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................GGCCTCTGAGAAGTTATGTCGAT............................................................................................................................................. 23 1 20 0.05 1 0 0 0 0 0 1 0 0 0
......................................................................................TGGCCTCTGAGAAGTTATTTCGATT............................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................GTTATTTCGATTCCGACTTTT................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................CTGAGAAGCTATCTCGATTCCGAC....................................................................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................ATGAGAAGTTATTTCGATTCCGACTTT.................................................................................................................................... 27 1 20 0.05 1 0 0 0 0 0 1 0 0 0
.......................................................................................GGCCTCTGAGAAGTTATTTCG............................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................AGTTTGATGTTGTTTCTTGAA........................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................TCCTTTCGGTTTGCGCGGA........................................................................ 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................AGACAGTTGGATGTTGTTT................................................................................................. 19 0 20 0.05 1 0 0 0 1 0 0 0 0 0
...........TTGGGGGACCGTTCTTGTC............................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0
..............................................................................................GAGAAGCTATCTCGATTCCGACTTT.................................................................................................................................... 25 2 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................................................................AGCTATCTCGATTCCGACTTTTGC................................................................................................................................. 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................CTGAGAAGTTATTTCGATTCCGAC....................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................TCTGAGAAGTTATTTCGATTCCGACTT..................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................GGATGTTGTTTCTTGAATC......................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............AGGGAGACCGTTCTTGTCT............................................................................................................................................................................................................................ 19 1 20 0.05 1 0 0 0 0 0 1 0 0 0
.............TGGAGACCGTTCTTGTCTC........................................................................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTGAATCCTTTCTGATTG.............................................................................. 18 2 20 0.05 1 0 0 0 0 0 1 0 0 0
..........................................................................................................CGATTCCGACTTTTGCAATT............................................................................................................................. 20 1 20 0.05 1 0 0 0 0 1 0 0 0 0
......................................................................................GGGCCTCTGAGAAGTTATGTCGAT............................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................GGCCTCTGAGACGTTATTTCGAT............................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................AGAAGTTATCTCGATTCCGACTTT.................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................AAGTTGGATGTTGTTTCTTGA............................................................................................ 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...........CGGGGAGACCGTTTTTGTC............................................................................................................................................................................................................................. 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................TTCGGTTTGCGCGGAGGACTGCATTC............................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................GCTATCTCGATTCCGACTTTTGC................................................................................................................................. 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................GAGAAGTTATTTCGATTCCGA........................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................TGGCCTCTGAGAAGTTATTTCGAT............................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................GGCCTCTGAGACGTTATTTCGATT............................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................CAGACAGTTGGATGTTGTT.................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................CAGACAGTTCGATGTTGTTT................................................................................................. 20 1 20 0.05 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................CAGACAGTTCGATGTTGTTTCATGAA........................................................................................... 26 2 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................AGGATGTTGTTTCTTGAAT.......................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................................................................................ACTTTTGCAACTCGTTTTGAT.................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................GGGCCTCTGAGAAGTTATTTCGATTC........................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.............GGGAGACCGTTCTTGTCT............................................................................................................................................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........CAGGGGGACCGTTCTTGTCT............................................................................................................................................................................................................................ 20 2 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................CAGTTGGATGTTGTTTCTTGAA........................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................TCTGAGAAGTTATTTCGATTCCCAC....................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0
.......................................................................................GGCCTCTGAGAAGTTATTT................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................GAGAAGTTATTTCGATTCCGACTTT.................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................AGTTGGATGTTGTTTCTTG............................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................CCTCTGAGAAGTTATTTCGATTCCGAC....................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................TCTGAGAAGCTATCTCGATTCCGACT...................................................................................................................................... 26 2 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................CTGAGAAGTTATCTCGATTCCGACTT..................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................AGAAGTTATTTCGATTCCGACT...................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.............GGGGGACCGTTCTTGTCA............................................................................................................................................................................................................................ 18 2 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1a:5332583-5332833 + dps_2520 CGATAAATCCTGCCCCTCTGGCAAGAAC------AGAGCCCGGAAGAAACCTTAATGGTAGACTCTGAAACTGGGCGAACTCCGG-AAAGCCACCCGGAGACTCTTCAATAAAGCTAAGGCTGAAAACGTTGAGCAAAACTG------------------TCTGTCAACCTACAACAAA-GAACTTAGGAAAGCCAAACGCG--------CCTCTTGACGTAAGTTC-------------------------------------------------TTTCGAAGACTACACCCAGACTGGACTACTTGAAGAATGTCGGCCAATCTTGGACCAC
droPer2 scaffold_11:1963918-1964186 + CGATAAATCCTGCCCCTCTGGCAAGAAC------AGAGCCCGGAAGAAACCTGAATGGTAGACTCCGAAACTGGGCGAACTCCGG-AAAGCCTCCCGGAGACTCTTCAATAAAGCTAAGGCTGAAAACGTTGAGCAAAACTGGGCCGATTACAAGGCCAGTCTGTCAACCTACAACAAA-GAACTTAGGAAAGCCAAACGCG--------CCTCTTGACGTAAGTTC-------------------------------------------------TTTCGAAGACTACACCCAGACTGTGCTACTTGAAGAATGTCGACCAATCTTGGACCAC
droGri2 scaffold_15110:24551326-24551597 + TAAGGCAGCCTGCCCAATCAGCAAATCC------AAGCCTAAGGAAAAACCTCCATGATGGACACCTCAACATCGTGCTCTTCGACAAAGGTCGAAGGTTTCTCTTCAATACTGCGAAATCGCACAATATCGATCTTCGATGGTCTCAGTACAGTTCTAGTCAGCCGGAATACAAAAAA-GCCACTAAGCAATCAAATAAGA--------AATCGTGGAGAGATTTTTC-----------------------------------------------TTTCGAAAACCACCCCTACACTATGTTATCTAATGAAAGATGACCAATCAAGGTTGGT
droAna3 scaffold_9383:6549-6831 + CCATAGGGCCTGCCCCAAGAAAAGATTAGGTAGCAGCAGATCGAAGAAGCCTGCATGGTGGACCTCGTCGCTAGCCCCCTTCAAG-AAAAATGCACGTAGGGCCTTTAACCACGCGCACTGTACCAAAACAGACGACGCGTGGGAGGCCTATAAAGCTGAACTCAGGCGGTATAACAAA-GAATTGCGTAAGGCAAAGAGGGGTGGCCGCCCGCCTAAGAAAGATTC-------------------------------------------------TCTCTACTACAGCCCCCATCGTAGGTTATATTAAGAACACGGATGGGCGGTGGACTAC
droBip1 scf7180000394440:8342-8623 + CAATAAAGCTTGTCCCAAAAGCAGATCGGGCAATAGCAAGTCAAAGAAACCACAATGGTGGTCGCAAACACTTGATCCCTTTAAA-ACCACGGCCCGCAAGGCCTTTAATTTCGCCAGGAAAAAAAACTCGGAAATAGCCTGGGAGACGTATAAAGCGGACCTTAGGCGATATAACAAA-GAACTTCGCAAGGCAAAAAGGA--------ATGCCTGGGCCAAGTTCTGTACGAACATTAAGGCTCAACTTGTCCCGGCTCAACTT--------------------------------------ATTAAAGCCGGTC--CCAACCTGAGAT--C
droFic1 scf7180000451427:19621-19806 + CGAGGACAGTTGCCCTCTTGGCAAATAG------AAAAGGGAAAGAGACGCCCCCTGGTGGAACTCCAACCTGGAACCTCTCCGC-ATCTCCACCCGCCGGCTCTTTAACAGAGCAAAAACGAA------CGAGGAAAACTGGGGACATTATAAGCAAAGCCTGCCGCTCTACAACAAA-GAGATCAGGAAAGCCAAACG--------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000489815:4612-4888 + CAAT-CAGCCTACCCTAAATGCAAACCG------AGGGGATCCAAAAAGCCTCCTCGGTGGACCCAGAAACTTAAAGAACTCAAA-TCAAGCTGCAGAACCTTCTTTAACAGGACGAAAGCGGGGAATGAAGATCTAAAATGGCAACAATATAAGTTGGAACTAGCCTCCTACAACAAG-GCCATAAGAAAAGGAAAACGAT--------CAGCTTGGCAGACCTTCTGCTCAAACATAGAGGAAACAACCGATTCAGCTCGGATAAGGAAAA----------------------------------------ACCAGATGGCTCATGGTCAGA
droRho1 scf7180000766013:26293-26585 - CTCAGCTGCATGCCCGTTAGGGAAACCA------AGGGGAAGGAAAAAACCTCCTTGGTGGACCCAGCAATTATCAATCCTCAGA-GCCAAATGCAGAAACCTGTTCAACAGAGCGAAAGCTGCAAATGAGGACATAAACTGGCAAAGCTACAAAAAGGAACTAGCCACATACAAAAAG-GCCATCAGAAAAGACAACTGGA---------------------------------CATTGAAAAGACAACTGATGCCGCAAGGCTCAGAAAAATACTTTCTAAGACAGCGGTATCCCTGGGCTATCTCCAAAAGGCTGACGGATCATGGTCGGA
droTak1 scf7180000415759:48930-49204 - CACAGCTGCATGCCCTTTAAGAAAAGCA------AGAGGAAAGAAAAAACCTCCATGGTGGACCCAGCAATTATCAATCCTCAGA-GCCAAATGCAGAAGCCTGTTCAACAGAGCGAAATCTACAAATGAGGACATATACTGGCAAAGCTACAAAGAGGAACTAGCCACATACAAAAAG-GCCATCAGGAAGCAGAAGAGAA--------CTGCATGGCAGAACTTCTGCTCAGATATTGAAAGGAAAACTGATGCTGCTAGGCTCAGAAAAA----------------------------------------TACTTTCTACTCTCGGAC---
droYak3 v2_chrUn_6969:5916-6174 - AAAAAAGGCCTGCCCCAATAGCAAGCCC------AAAAGAAAAAGAAAACCTCCCTGGTGGTCAGCAAAACTGTCCCCCCTCCGA-ATAGACTGCAGAACCCTTTTTAACAGGGCCAAGGCAGGAAATGAGGAGGCCCAGTGGACCGCCTACAAGAGAGCCCTTGCAAACTACAAAAAAGGCCATCAGAAAAGCAAAGCGAT--------CCTCGTGGCATTCCTTCTGCTCAGAAATTGAAAAGACAACTGCAGCAGAGATGG------------------------------------------------------------CCTGGACCAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CGATAAATCCTGCCCCTCTGGCAAGAAC------AGAGCCCGGAAGAAACCTTAATGGTAGACTCTGAAACTGGGCGAACTCCGG-AAAGCCACCCGGAGACTCTTCAATAAAGCTAAGGCTGAAAACGTTGAGCAAAACTG------------------TCTGTCAACCTACAACAAA-GAACTTAGGAAAGCCAAACGCG--------CCTCTTGACGTAAGTTC-------------------------------------------------TTTCGAAGACTACACCCAGACTGGACTACTTGAAGAATGTCGGCCAATCTTGGACCACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................CTACAACAAA-GAACTTAGGAAAGC............................................................................................................................................2446.502601400000840
...................................................................................................GACTCTTCAATAAAGCTAAGGC.....................................................................................................................................................................................................................22205.55111099110100000
..................................................................................................AGACTCTTCAATAAAGCTAAGGC.....................................................................................................................................................................................................................23202.154303920000200
.........................................................................................................................................................................CTACAACAAA-GAACTTAGGAAAGCC...........................................................................................................................................2541.5060220000020
...................................................................................................GACTCTTCAATAAAGCTAAGGCT....................................................................................................................................................................................................................23201.452902900000000
...................................................................................................GACTCTTCAATAAAGCTAAGGCTG...................................................................................................................................................................................................................24201.302602200000400
.........................................................................................................................................................................CTACAACAAA-GAACTTAGGAAAG.............................................................................................................................................2341.2550300001100
.........................................................................................................................................................................CTACAACAAA-GAACTTAGGAAA..............................................................................................................................................2251.0050100000400
..................................................................................................AGACTCTTCAATAAAGCTAAGG......................................................................................................................................................................................................................22200.901801500000300
...................................................................................................GACTCTTCAATAAAGCTAAGGCTGAAA................................................................................................................................................................................................................27200.601201200000000
................................................................................................................................................................................................................................TTC-------------------------------------------------TTTCGAAGACTACACCCAGACTGGAC................................2920.5010100000000
......................................................................................................................................................................................................................................................................................TCGAAGACTACACCCAGACTGGACT...............................2520.5010100000000
......................................................................................................................................................................................................................................................................................TCGAAGACTACACCCAGACTGGAC................................2420.5010100000000
.........................................................................................................................................................................CTACAACAAA-GAACTTAGGAAAGCCA..........................................................................................................................................2640.5020100000100
...................................................................................................................TAAGGCTGAAAACGTTGAGCA......................................................................................................................................................................................................21190.4280400001300
...................................................................................................GACTCTTCAATAAAGCTAAGGCTGA..................................................................................................................................................................................................................25200.4080700001000
....................................................................................................ACTCTTCAATAAAGCTAAGGC.....................................................................................................................................................................................................................21200.3570700000000
.........................................................................................................................................................................CTACAACAAA-GAACTTAGGAAAGCCAAG........................................................................................................................................2840.2510100000000
..................................................................................................................CTAAGGCTGAAAACGTTGAGCAAAAC..................................................................................................................................................................................................26180.2240000000400
...............................................................................................................AAGCTAAGGCTGAAAACGTTGA.........................................................................................................................................................................................................22180.2240000000400
.....................................................................................................................AGGCTGAAAACGTTGAGCAAA....................................................................................................................................................................................................21190.2140200000200
...TAAATCCTGCCCCTCTGGCAAGACA------............................................................................................................................................................................................................................................................................................................2550.2010100000000
..........................................................................................................................................................................TACAACAAA-GAACTTAGGAAAGC............................................................................................................................................2360.1710100000000
..........................................................................................................................................................................TACAACAAA-GAACTTAGGAAAGCCAAA........................................................................................................................................2760.1710100000000
..................................................................................................................CTAAGGCTGAAAACGTTGAGC.......................................................................................................................................................................................................21190.1630300000000
..................................................................................................AGACTCTTCAATAAAGCTAAGGCTG...................................................................................................................................................................................................................25200.1530300000000
..................................................................................................AGACTCTTCAATAAAGCTAAGGCT....................................................................................................................................................................................................................24200.1530300000000
.............................................................................................................TAAAGCTAAGGCTGAAAACGTTGAGCA......................................................................................................................................................................................................27180.1120200000000
....................................................................................................................AAGGCTGAAAACGTTGAGCAAAAC..................................................................................................................................................................................................24180.1120000000200
....................................................................................................................AAGGCTGAAAACGTTGAGCAAA....................................................................................................................................................................................................22180.1120100000100
...............................................................................................................AAGCTAAGGCTGAAAACGTTG..........................................................................................................................................................................................................21180.1120200000000
........................................................................................................................CTGAAAACGTTGAGCAAAACT.................................................................................................................................................................................................21190.1120200000000
...................................................................................................................TAAGGCTGAAAACGTTGAGC.......................................................................................................................................................................................................20190.1120100000100
..................................................................................................................CTAAGGCTGAAAACGTTGAGCA......................................................................................................................................................................................................22190.1120200000000
................................................................................................................................................................TCTGTCAACCTACAACAAA-GA........................................................................................................................................................21200.1020000000110
....................................................................................................................AAGGCTGAAAACGTTGAGC.......................................................................................................................................................................................................19200.1020200000000
....................................................................................................................................................................TCAACCTACAACAAA-GAACTT....................................................................................................................................................21200.1020100000100
...........................................................................................................AATAAAGCTAAGGCTGAAAACG.............................................................................................................................................................................................................22200.1020200000000
............................................................................................................ATAAAGCTAAGGCTGAAAACG.............................................................................................................................................................................................................21200.1020200000000
....................................................................................................ACTCTTCAATAAAGCTAAGG......................................................................................................................................................................................................................20200.1020200000000
..........................................................................................................CAATAAAGCTAAGGCTGAAA................................................................................................................................................................................................................20200.1020200000000
....................................................................................................................AAGGCTGAAAACGTTGAGCA......................................................................................................................................................................................................20200.1020100000100
.....................................................................................................CTCTTCAATAAAGCTAAGGCT....................................................................................................................................................................................................................21200.1020200000000
...................................................................................................GACTCTTCAATAAAGCTAAGGCTGAAAA...............................................................................................................................................................................................................28200.1020100000100
....................................................................................................ACTCTTCAATAAAGCTAAGGCTG...................................................................................................................................................................................................................23200.1020200000000
..........TGCCCCTCTGGCAAGAAC------AG..........................................................................................................................................................................................................................................................................................................20200.1020200000000
.....................................................................................................CTCTTCAATAAAGCTAAGGCTG...................................................................................................................................................................................................................22200.1020200000000
..ATAAATCCTGCCCCTCTGGC........................................................................................................................................................................................................................................................................................................................20120.0810100000000
...TAAATCCTGCCCCTCTGGCA.......................................................................................................................................................................................................................................................................................................................20120.0810100000000
...TAAATCCTGCCCCTCTGGCAAG.....................................................................................................................................................................................................................................................................................................................22120.0810100000000
..ATAAATCCTGCCCCTCTGGCAA......................................................................................................................................................................................................................................................................................................................22120.0810100000000
CGATAAATCCTGCCCCTCTG..........................................................................................................................................................................................................................................................................................................................20150.0710000100000
................................................................................................................................................................TCTGTCAACCTACAACAAA-GAACTTAG..................................................................................................................................................27170.0610100000000
.............................................................................................................TAAAGCTAAGGCTGAAAACGTTGAGCAA.....................................................................................................................................................................................................28170.0610100000000
................................................................................................................AGCTAAGGCTGAAAACGTTG..........................................................................................................................................................................................................20180.0610100000000
...............................................................................................................AAGCTAAGGCTGAAAACGTTGAG........................................................................................................................................................................................................23180.0610000000100
...........................................................................................................AATAAAGCTAAGGCTGAAAACGTTGA.........................................................................................................................................................................................................26180.0610100000000
..............................................................................................................AAAGCTAAGGCTGAAAACGTTG..........................................................................................................................................................................................................22180.0610100000000
................................................................................................................................................................TCTGTCAACCTACAACAAA-GAACTTA...................................................................................................................................................26180.0610100000000
.............................................................................................................TAAAGCTAAGGCTGAAAACGTTGAGC.......................................................................................................................................................................................................26180.0610100000000
....................................................................................................................AAGGCTGAAAACGTTGAGCAA.....................................................................................................................................................................................................21180.0610100000000
.............................................................................................................TAAAGCTAAGGCTGAAAACGTTG..........................................................................................................................................................................................................23180.0610100000000
..............................................................................................................AAAGCTAAGGCTGAAAACGTT...........................................................................................................................................................................................................21180.0610100000000
..................................................................................................................CTAAGGCTGAAAACGTTGAGCAAA....................................................................................................................................................................................................24180.0610000000100
.....................................................................................................................AGGCTGAAAACGTTGAGCAA.....................................................................................................................................................................................................20190.0510100000000
.........................................................................................................................TGAAAACGTTGAGCAAAACTG------------------..............................................................................................................................................................................21190.0510100000000
.............................................................................................................................................G------------------TCTGTCAACCTACAACAAA-GAACTT....................................................................................................................................................26190.0510100000000
..........................................................................................................................GAAAACGTTGAGCAAAACTG------------------..............................................................................................................................................................................20190.0510100000000
.........................................................................................................................TGAAAACGTTGAGCAAAACT.................................................................................................................................................................................................20200.0510100000000
...........................................................................................................AATAAAGCTAAGGCTGAAAACGT............................................................................................................................................................................................................23200.0510100000000
CGATAAATCCTGCCCCTCT...........................................................................................................................................................................................................................................................................................................................19200.0510100000000
..................................................................................................................................................................TGTCAACCTACAACAAA-GAACT.....................................................................................................................................................22200.0510100000000
.................................................................................................................................................................CTGTCAACCTACAACAAA-GA........................................................................................................................................................20200.0510100000000
.......................................................................................................CTTCAATAAAGCTAAGGC.....................................................................................................................................................................................................................18200.0510100000000
...................................................................................................................................................................GTCAACCTACAACAAA-GAACT.....................................................................................................................................................21200.0510100000000
..........TGCCCCTCTGGCAAGAAC------AGAG........................................................................................................................................................................................................................................................................................................22200.0510100000000
..................................................................................................................................................................TGTCAACCTACAACAAA-GAAC......................................................................................................................................................21200.0510100000000
..................................................................................................AGACTCTTCAATAAAGCTAAGGA.....................................................................................................................................................................................................................23200.0510100000000
...................................................................................................GACTCTTCAATAAAGCTAAGGCG....................................................................................................................................................................................................................23200.0510100000000
...................................................................................................GACTCTTCAATAAAGCTAAGGCA....................................................................................................................................................................................................................23200.0510100000000
........................................................................................................................................................................CCTACAACAAA-GAACTTAG..................................................................................................................................................19200.0510100000000
.....................................................................................................................AGGCTGAAAACGTTGAGCA......................................................................................................................................................................................................19200.0510100000000
.............................................................................................................TAAAGCTAAGGCTGAAAACG.............................................................................................................................................................................................................20200.0510100000000
.....................................................................................................CTCTTCAATAAAGCTAAGGC.....................................................................................................................................................................................................................20200.0510100000000
....................................................................................................ACTCTTCAATAAAGCTAAGGCA....................................................................................................................................................................................................................22200.0510100000000
droPer2
CGATAAATCCTGCCCCTCTGGCAAGAAC------AGAGCCCGGAAGAAACCTGAATGGTAGACTCCGAAACTGGGCGAACTCCGG-AAAGCCTCCCGGAGACTCTTCAATAAAGCTAAGGCTGAAAACGTTGAGCAAAACTGGGCCGATTACAAGGCCAGTCTGTCAACCTACAACAAA-GAACTTAGGAAAGCCAAACGCG--------CCTCTTGACGTAAGTTC-------------------------------------------------TTTCGAAGACTACACCCAGACTGTGCTACTTGAAGAATGTCGACCAATCTTGGACCACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................TGTCAACCTACAACAAA-GAACTTAGG.................................................................................................................................................26141.93270270000
..................................................................................................................................................................TGTCAACCTACAACAAA-GAACTTA...................................................................................................................................................24200.357070000
..................................................................................................................................................................TGTCAACCTACAACAAA-GAACTTAGGA................................................................................................................................................27140.213030000
...........................................................................................................AATAAAGCTAAGGCTGAAAACGTTGA.........................................................................................................................................................................................................26200.204040000
....................................................................................................................................................................TCAACCTACAACAAA-GAACTTAGG.................................................................................................................................................24140.142020000
............................................................GACTCCGAAACTGGGCGAACTCCGG-........................................................................................................................................................................................................................................................25100.101010000
............................................................GACTCCGAAACTGGGCGGT...............................................................................................................................................................................................................................................................19110.091001000
..........................................................................................................................................................................TACAACAAA-GAACTTAGGAAAGCCAAACG......................................................................................................................................29130.081010000
.........................................................................................................................................................................CTACAACAAA-GAACTTAGGAAAGCC...........................................................................................................................................25130.081010000
...................................................................................................................................................................GTCAACCTACAACAAA-GAACTTAGG.................................................................................................................................................25140.071010000
.....................................................................................................................................................................CAACCTACAACAAA-GAACTTAGG.................................................................................................................................................23140.071010000
..................................................................................................................................................................TGTCAACCTACAACAAA-GAACTTAGGAA...............................................................................................................................................28140.071010000
....................................................................................................................................................................TCAACCTACAACAAA-GAACTTAGGAA...............................................................................................................................................26140.071010000
................................................................................TCCGG-AAAGCCTCCCGGAGACTCTTC...................................................................................................................................................................................................................................26200.051010000
...........................................................................................................AATAAAGCTAAGGCTGAAAACG.............................................................................................................................................................................................................22200.051010000
..................................................................................................................................................................TGTCAACCTACAACAAA-GAACTTAT..................................................................................................................................................25200.051010000
...........................................................................................................AATAAAGCTAAGGCTGAAAACGTTGAG........................................................................................................................................................................................................27200.051010000
...........................................................................................................AATAAAGCTAAGGCTGAAAACGTTG..........................................................................................................................................................................................................25200.051000001
...........................................................................................................AATAAAGCTAAGGCTGAAAACGTTGAGCA......................................................................................................................................................................................................29200.051010000
.............................................................................................................TAAAGCTAAGGCTGAAAAC..............................................................................................................................................................................................................19200.051010000
..................................................................................................................................................................TGTCAACCTACAACAAA-G.........................................................................................................................................................18200.051010000
............................................................................................................ATAAAGCTAAGGCTGAAAACGTTGA.........................................................................................................................................................................................................25200.051010000
..ATAAATCCTGCCCCTCTGGCAAG.....................................................................................................................................................................................................................................................................................................................23200.051010000
.....................................................................................................................................................TACAAGGCCAGTCTGTCAACCTACAAC..............................................................................................................................................................27200.051010000
droGri2
TAAGGCAGCCTGCCCAATCAGCAAATCC------AAGCCTAAGGAAAAACCTCCATGATGGACACCTCAACATCGTGCTCTTCGACAAAGGTCGAAGGTTTCTCTTCAATACTGCGAAATCGCACAATATCGATCTTCGATGGTCTCAGTACAGTTCTAGTCAGCCGGAATACAAAAAA-GCCACTAAGCAATCAAATAAGA--------AATCGTGGAGAGATTTTTC-----------------------------------------------TTTCGAAAACCACCCCTACACTATGTTATCTAATGAAAGATGACCAATCAAGGTTGGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CCATAGGGCCTGCCCCAAGAAAAGATTAGGTAGCAGCAGATCGAAGAAGCCTGCATGGTGGACCTCGTCGCTAGCCCCCTTCAAG-AAAAATGCACGTAGGGCCTTTAACCACGCGCACTGTACCAAAACAGACGACGCGTGGGAGGCCTATAAAGCTGAACTCAGGCGGTATAACAAA-GAATTGCGTAAGGCAAAGAGGGGTGGCCGCCCGCCTAAGAAAGATTC-------------------------------------------------TCTCTACTACAGCCCCCATCGTAGGTTATATTAAGAACACGGATGGGCGGTGGACTACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................AGCAGCAGATCGAAGAAGCCT..........................................................................................................................................................................................................................................................................................21200.459000036
................................................................................................................................................................................................................................TTC-------------------------------------------------TCTCTACTACAGCCCCCATCGTAGGT................................29200.102200000
...............................................................................................................................................................................................................................ATTC-------------------------------------------------TCTCTACTACAGCCCCCATCGT....................................26200.102200000
.................................................................................CAAG-AAAAATGCACGTAGGGC.......................................................................................................................................................................................................................................21200.102000020
............................................................................................................................................................................TAACAAA-GAATTGCGTAAGGCA...........................................................................................................................................22200.102200000
...............................AGCAGCAGATCGAAGAAGCC...........................................................................................................................................................................................................................................................................................20200.102000011
..............................................................................................................................................................................................................................................................................................................TATATTAAGAACACGGATGGGC..........22200.102000002
..................................................................................................................................................................................................................................................................................................................TTAAGAACACGGATGGGCGGT.......21200.051100000
..................................................................................AAG-AAAAATGCACGTAGGG........................................................................................................................................................................................................................................19200.051100000
...............................................................................................................................................................................................................................ATTC-------------------------------------------------TCTCTACTACAGCCCCCATCT.....................................25200.051100000
...........................................................................................................................................................................................................................................................................................................GGTTATATTAAGAACACGGATGGG...........24200.051100000
..................................................................................................................................................................TCAGGCGGTATAACAAA-GAATTGC...................................................................................................................................................24200.051001000
...........................................................................................TGCACGTAGGGCCTTTAACC...............................................................................................................................................................................................................................20200.051100000
...............................................................................TTCAAG-AAAAATGCACGTAGGGT.......................................................................................................................................................................................................................................23200.051100000
..................................................................................................................................................................................................................................C-------------------------------------------------TCTCTACTACAGCCCCCATCGTAGGTT...............................28200.051100000
..............................................................................................................................................................................................................................GATTC-------------------------------------------------TCTCTACTACAGCCCCCATCGTA...................................28200.051100000
..............................................................................CTTCAAG-AAAAATGCACGTAGGGC.......................................................................................................................................................................................................................................24200.051000010
........................................................................................................................................................................................................................AAGAAAGATTC-------------------------------------------------TCTCTACTACAGCCCCCA........................................29200.051100000
..................................................................................................................................................................................................................................................................................................................TTAAGAACACGGATGGGCGGTGG.....23200.051100000
...................................................................................AG-AAAAATGCACGTAGGGCCT.....................................................................................................................................................................................................................................21200.051000001
..............................................................................................................................................................................................................................................................................................................TATATTAAGAACACGGATGGGCGG........24200.051100000
...............................................................................TTCAAG-AAAAATGCACGTAGGGCCTT....................................................................................................................................................................................................................................26200.051010000
.....................................................................................................................................................................................................................................................................................CTCTACTACAGCCCCCATCGTAGGTTA..............................27200.051100000
....................................................................................G-AAAAATGCACGTAGGGCCTTTAACCA..............................................................................................................................................................................................................................27200.051100000
.........................................................................................AATGCACGTAGGGCCTTTAACCA..............................................................................................................................................................................................................................23200.051000010
..................................................................................................................................................................................................................................................................................................................TTAAGAACACGGATGGGCGG........20200.051100000
............................GGTAGCAGCAGATCGAAGAAGCC...........................................................................................................................................................................................................................................................................................23200.051000001
............................................................GACCTCGTCGCTAGCCCCCTTCAAG-........................................................................................................................................................................................................................................................25200.051100000
..............................................................................CTTCAAG-AAAAATGCACGTAGGGG.......................................................................................................................................................................................................................................24200.051001000
...................................................................................AG-AAAAATGCACGTAGGGCCTTT...................................................................................................................................................................................................................................23200.051010000
....................................................................................................................................................................................................................................................................................TCTCTACTACAGCCCCCATCGTAGGT................................26200.051100000
................................................................................................................................................................................................................................................................................................................TATTAAGAACACGGATGGG...........19200.051000010
..............................TAGCAGCAGATCGAAGAAGCC...........................................................................................................................................................................................................................................................................................21200.051010000
.............................................................................CCTTCAAG-AAAAATGCACGTAGGGCC......................................................................................................................................................................................................................................26200.051100000
..............................................................................................................................................................................................................................................................................................................TATATTAAGAACACGGATGG............20200.051100000
.............................................................................................................................................................TGAACTCAGGCGGTATAAC..............................................................................................................................................................19200.051100000
...........................................................GGACCTCGTCGCTAGCCCCCTT.............................................................................................................................................................................................................................................................22200.051100000
...........GCCCCAAGAAAAGATTAGGTAGCAGC.........................................................................................................................................................................................................................................................................................................26200.051100000
....................................................................................................................................................................................................................................................................................TCTCTACTACAGCCCCCATCGT....................................22200.051100000
..............................................................................................................................................................................................................................................................................................................TATATTAAGAACACGGATGGGCGGTG......26200.051010000
.......................................................................................................................................................TAAAGCTGAACTCAGGCGGTATAACA.............................................................................................................................................................26200.051100000
........................................................................................................................................................................................................................AAGAAAGATTC-------------------------------------------------TCTCTACTACAGCCCC..........................................27200.051100000
..............................................................................................ACGTAGGGCCTTTAACCACGC...........................................................................................................................................................................................................................21200.051000010
droBip1
CAATAAAGCTTGTCCCAAAAGCAGATCGGGCAATAGCAAGTCAAAGAAACCACAATGGTGGTCGCAAACACTTGATCCCTTTAAA-ACCACGGCCCGCAAGGCCTTTAATTTCGCCAGGAAAAAAAACTCGGAAATAGCCTGGGAGACGTATAAAGCGGACCTTAGGCGATATAACAAA-GAACTTCGCAAGGCAAAAAGGA--------ATGCCTGGGCCAAGTTCTGTACGAACATTAAGGCTCAACTTGTCCCGGCTCAACTT--------------------------------------ATTAAAGCCGGTC--CCAACCTGAGAT--CSizeHit CountTotal NormTotal
No Reads
droFic1
CGAGGACAGTTGCCCTCTTGGCAAATAG------AAAAGGGAAAGAGACGCCCCCTGGTGGAACTCCAACCTGGAACCTCTCCGC-ATCTCCACCCGCCGGCTCTTTAACAGAGCAAAAACGAA------CGAGGAAAACTGGGGACATTATAAGCAAAGCCTGCCGCTCTACAACAAA-GAGATCAGGAAAGCCAAACG--------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CAAT-CAGCCTACCCTAAATGCAAACCG------AGGGGATCCAAAAAGCCTCCTCGGTGGACCCAGAAACTTAAAGAACTCAAA-TCAAGCTGCAGAACCTTCTTTAACAGGACGAAAGCGGGGAATGAAGATCTAAAATGGCAACAATATAAGTTGGAACTAGCCTCCTACAACAAG-GCCATAAGAAAAGGAAAACGAT--------CAGCTTGGCAGACCTTCTGCTCAAACATAGAGGAAACAACCGATTCAGCTCGGATAAGGAAAA----------------------------------------ACCAGATGGCTCATGGTCAGASizeHit CountTotal NormTotal
No Reads
droRho1
CTCAGCTGCATGCCCGTTAGGGAAACCA------AGGGGAAGGAAAAAACCTCCTTGGTGGACCCAGCAATTATCAATCCTCAGA-GCCAAATGCAGAAACCTGTTCAACAGAGCGAAAGCTGCAAATGAGGACATAAACTGGCAAAGCTACAAAAAGGAACTAGCCACATACAAAAAG-GCCATCAGAAAAGACAACTGGA---------------------------------CATTGAAAAGACAACTGATGCCGCAAGGCTCAGAAAAATACTTTCTAAGACAGCGGTATCCCTGGGCTATCTCCAAAAGGCTGACGGATCATGGTCGGASizeHit CountTotal NormTotal
No Reads
droTak1
CACAGCTGCATGCCCTTTAAGAAAAGCA------AGAGGAAAGAAAAAACCTCCATGGTGGACCCAGCAATTATCAATCCTCAGA-GCCAAATGCAGAAGCCTGTTCAACAGAGCGAAATCTACAAATGAGGACATATACTGGCAAAGCTACAAAGAGGAACTAGCCACATACAAAAAG-GCCATCAGGAAGCAGAAGAGAA--------CTGCATGGCAGAACTTCTGCTCAGATATTGAAAGGAAAACTGATGCTGCTAGGCTCAGAAAAA----------------------------------------TACTTTCTACTCTCGGAC---SizeHit CountTotal NormTotal
No Reads
droYak3
AAAAAAGGCCTGCCCCAATAGCAAGCCC------AAAAGAAAAAGAAAACCTCCCTGGTGGTCAGCAAAACTGTCCCCCCTCCGA-ATAGACTGCAGAACCCTTTTTAACAGGGCCAAGGCAGGAAATGAGGAGGCCCAGTGGACCGCCTACAAGAGAGCCCTTGCAAACTACAAAAAAGGCCATCAGAAAAGCAAAGCGAT--------CCTCGTGGCATTCCTTCTGCTCAGAAATTGAAAAGACAACTGCAGCAGAGATGG------------------------------------------------------------CCTGGACCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................TAGACTGCAGAACCCTTTTTAACAGG.............................................................................................................................................................................................................................26200.10220000000000
................................................................................TCCGA-ATAGACTGCAGAACCCTTTT....................................................................................................................................................................................................................................25200.10200000000002
.......................................................................TGTCCCCCCTCCGA-ATAGACTGCAGAAC..........................................................................................................................................................................................................................................28190.05101000000000
..................................................................................................ACCCTTTTTAACAGGGCCAAGGC.....................................................................................................................................................................................................................23200.05101000000000
.....................................................................................................CTTTTTAACAGGGCCAAGGCA....................................................................................................................................................................................................................21200.05101000000000
......................................................................................................TTTTTAACAGGGCCAAGGCAG...................................................................................................................................................................................................................21200.05101000000000
.....................................AGAAAAAGAAAACCTCCCTGGTGG.................................................................................................................................................................................................................................................................................24200.05101000000000
........................................................................................AGACTGCAGAACCCTTTTTAACAGGGC...........................................................................................................................................................................................................................27200.05101000000000
..............................................................................CCTCCGA-ATAGACTGCAGAACCC........................................................................................................................................................................................................................................23200.05100100000000
.........................................................................TCCCCCCTCCGA-ATAGACTGCAGAACC.........................................................................................................................................................................................................................................27200.05101000000000
...............................................................................................................................................................................................AGCAAAGCGAT--------CCTCGTGGCATTCCTT............................................................................................................27200.05100000010000
............................................................................................TGCAGAACCCTTTTTAACAGGGCC..........................................................................................................................................................................................................................24200.05100100000000

Generated: 05/18/2015 at 04:53 AM