ID:

dps_2519

 Coordinate:

XL_group1a:5331875-5332025 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-42.9 -42.8 -42.7

Flybase annnotation

CDS [Dpse\GA23012-cds]; exon [dpse_GLEANR_11434:3]; intron [Dpse\GA23012-in]

Repeatable elements

NameClassFamilyStrand
BilboLINELOA+
mature
  1. Unknown_group_109:234-256 -
  2. Unknown_group_40:1632-1654 +
  3. Unknown_group_141:8579-8601 +
  4. dps_1886  Unknown_group_232:4473-4495 +
  5. 2:23994128-23994150 +
  6. Unknown_group_206:14870-14892 +
  7. Unknown_group_192:3617-3639 +
  8. Unknown_group_800:27612-27634 +
  9. Unknown_group_167:62141-62163 +
  10. dps_2519  XL_group1a:5331904-5331926 +
  11. dps_1836  Unknown_group_178:10418-10440 +
  12. Unknown_group_178:17200-17222 -
  13. Unknown_group_722:16381-16403 +
  14. Unknown_singleton_3856:1962-1984 +
  15. Unknown_singleton_2455:540-562 +
  16. Unknown_singleton_3151:138-160 -
  17. Unknown_singleton_385:777-799 +
  18. Unknown_singleton_3717:311-333 -
  19. Unknown_singleton_1074:1008-1030 -
  20. Unknown_group_495:4532-4554 +
  21. 2:18191087-18191109 -
  22. Unknown_group_199:1611-1633 -
  23. Unknown_group_257:21325-21347 -
  24. Unknown_group_431:263-285 -
  25. Unknown_group_45:13203-13225 -
  26. Unknown_group_728:1045-1067 -
  27. Unknown_group_349:1994-2016 -
  28. Unknown_group_110:14347-14369 -
  29. Unknown_group_28:39193-39215 -
  30. Unknown_group_452:848-870 -
  31. Unknown_group_344:1848-1870 -
  32. Unknown_singleton_1120:784-806 -
  33. Unknown_singleton_3769:727-749 -
  34. Unknown_singleton_3724:536-558 -
  35. Unknown_singleton_3023:154-176 -
star
  1. Unknown_group_110:14241-14261 -
  2. dps_2519  XL_group1a:5332004-5332024 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGGAGGAGCTGGAGTCCCCCGACAGCGACCTGGAAACAACAATGGTGGAGGTGAGCCTCAGGAATGTCACTGACGCTCCTGCAGATAAACCTCCACCATTGTAAGGCAGCTTGCGCTGCTCTACTGCTGCATCTAGCCAATGGTGGAGCCTAAAAAGTCCTCATTTAGGATCCTCGGAAACAGGGTCTTCGGTCTGAGGACTCCAAACTATAAGCTATACGTAGCTGAAACCGCAGGTTAAATTCGTACCT
*******************************************************************************...........(((((((((((...((((((....)))))).....((((....))))))))))))))).........((((((...((((((((.......)))))))).....))))))*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902010
ovaries
 M062
head
 SRR902011
testis
 GSM444067
head
 GSM343916
embryo
...............................................................................TGCAGATAAACCTCCACCATTGT..................................................................................................................................................... 23 0 20 4.55 91 84 2 5 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGTAAG.................................................................................................................................................. 26 0 20 3.25 65 58 3 3 1 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGTA.................................................................................................................................................... 24 0 20 1.45 29 29 0 0 0 0 0 0
.....................................................................................................................................................................................................................................ACCGCAGGTTAAATTCGTA... 19 0 2 1.00 2 2 0 0 0 0 0 0
..........................................................................................................................................................................TCCTCGGAAACAGGGTTTTCGGT.......................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
.............................................................................CCTGCAGATAAACCTCCACCATTG...................................................................................................................................................... 24 0 20 0.90 18 17 0 0 1 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGTAAGGC................................................................................................................................................ 28 0 20 0.80 16 15 1 0 0 0 0 0
..............................................................................CTGCAGATAAACCTCCACCATTG...................................................................................................................................................... 23 0 20 0.55 11 11 0 0 0 0 0 0
...................................................................................................................................................................................ACAGGGTCTTCGGTCTGAGGA................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0
.................................................................................................................................................................................AAACAGGGTCTTCGGTCTGAGGACT................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................................................................................................TCGGAAACAGGGTCTTCGGTC......................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCAT........................................................................................................................................................ 20 0 20 0.50 10 10 0 0 0 0 0 0
............................................................................................................................................................................CTCGGAAACAGGGTCTTCGGTC......................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0
................................................................................GCAGATAAACCTCCACCATTGT..................................................................................................................................................... 22 0 20 0.45 9 9 0 0 0 0 0 0
................................................................................GCAGATAAACCTCCACCATTGTAAG.................................................................................................................................................. 25 0 20 0.30 6 6 0 0 0 0 0 0
..............................................................................CTGCAGATAAACCTCCACCAT........................................................................................................................................................ 21 0 20 0.30 6 5 0 1 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGTAA................................................................................................................................................... 25 0 20 0.25 5 0 0 5 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGTAAA.................................................................................................................................................. 26 1 20 0.25 5 5 0 0 0 0 0 0
..................................................................................AGATAAACCTCCACCATTGTA.................................................................................................................................................... 21 0 20 0.25 5 3 0 2 0 0 0 0
.............................................TTGAGGTGAGCCTCAGGAATGTCACT.................................................................................................................................................................................... 26 1 5 0.20 1 0 1 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCA......................................................................................................................................................... 19 0 20 0.20 4 4 0 0 0 0 0 0
.............................CCGGAACCAACAATGATGGAG......................................................................................................................................................................................................... 21 3 6 0.17 1 1 0 0 0 0 0 0
...........................................................................CTCCTGCAGATAAACCTCCAC........................................................................................................................................................... 21 0 20 0.15 3 2 0 0 1 0 0 0
.................................................................................CAGATAAACCTCCACCATTGT..................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0
................................................................................GCAGATAAACCTCCACCATT....................................................................................................................................................... 20 0 20 0.15 3 3 0 0 0 0 0 0
..............................................................................CTGCAGATAAACCTCCACCA......................................................................................................................................................... 20 0 20 0.15 3 3 0 0 0 0 0 0
........................................................................................................................................................................GATCCTCGGAAACAGGGTCTTT............................................................. 22 1 14 0.14 2 2 0 0 0 0 0 0
............................................................................................................................TGCTGCATCTAGCTACTGGA........................................................................................................... 20 3 8 0.13 1 1 0 0 0 0 0 0
...............................................................................TGTAGATAAACCTCCACCATTGTAAGGC................................................................................................................................................ 28 1 20 0.10 2 0 0 2 0 0 0 0
....................................................................................ATAAACCTCCACCATTGTA.................................................................................................................................................... 19 0 20 0.10 2 1 0 0 0 0 1 0
......................................................................TGATGCTCCTGCAGATAAACC................................................................................................................................................................ 21 1 20 0.10 2 2 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGTAAAA................................................................................................................................................. 27 2 20 0.10 2 2 0 0 0 0 0 0
.........................................................TCAGGAATGTCACTGACG................................................................................................................................................................................ 18 0 10 0.10 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGTAAGGCA............................................................................................................................................... 29 0 20 0.10 2 2 0 0 0 0 0 0
.......................................................................GATGCTCCTGCAGATAAACC................................................................................................................................................................ 20 1 20 0.10 2 2 0 0 0 0 0 0
...........................................................................................TCCACCATTGTAAGGCAGC............................................................................................................................................. 19 0 20 0.10 2 0 0 0 0 2 0 0
................................................................................GCAGATAAACCTCCACCATTGTAAGG................................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0 0 0
............................................................................TCCTGCAGATAAACCTCCACCATTG...................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0 0
.............................................................................CCTGCAGATAAACCTCCACCA......................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0
...........................................................................CTCCTGCAGATAAACCTCCACCATTG...................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTG...................................................................................................................................................... 22 0 20 0.10 2 0 0 0 0 0 0 2
.......................................AAATGGTGGAGGTGAGCCTCAG.............................................................................................................................................................................................. 22 1 11 0.09 1 0 0 0 0 0 1 0
..............................CGGAACCAACAATGATGGAG......................................................................................................................................................................................................... 20 3 11 0.09 1 1 0 0 0 0 0 0
............................................GTGGAGGTGAGCCAAAGG............................................................................................................................................................................................. 18 2 14 0.07 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................GAGGACTCCTAACTATAAG..................................... 19 1 15 0.07 1 0 0 0 0 1 0 0
........................................................................................................................................................................................................CTCCTAACTATAAGCTATACGTAGC.......................... 25 1 16 0.06 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................ATACGTAGCTGAAACCGCAGG.............. 21 0 18 0.06 1 1 0 0 0 0 0 0
......................................................................................................AAGGGGGCTAGCGCTGCTC.................................................................................................................................. 19 3 18 0.06 1 1 0 0 0 0 0 0
................................................................................GCAGATAAACCTCCACCCTTG...................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TTCAGATAAACCTCCACCATT....................................................................................................................................................... 21 1 20 0.05 1 0 0 0 1 0 0 0
..............................................................................CTGCAGATAAACCTCCACCATT....................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0
...................................................................................GATAAACCTCCACCATTGT..................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0
........................................................................................ACCTCCACCATTGTAGGGCA............................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0 0 0
................................................................................GCAGATAAACCTCCACCATTGTAAGGC................................................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0 0
......................................................................TGATGCTCCTGCAGATAA................................................................................................................................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0
..........................................................CAGGAATGTCACTGGTGCTCC............................................................................................................................................................................ 21 2 20 0.05 1 0 0 0 1 0 0 0
...................................................................................GATAAACCTCCACCATTG...................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCCTTGTAAG.................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0
.....................................................................................TAAACCTCCACCATTGTAAGGCA............................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0
........................................................................................ACCTCCACCCTTGTAAGGCAG.............................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0
.................................................................................CAGATAAACCTCCACCATTGTA.................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0
..............................................................................CTGCAGATAAACCTCCACCATTGTA.................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0
.......................................................................GATGCTCCTGCAGATAAACCT............................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0
..........................................................................GCTCCTGCAGATGAACCTCC............................................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGCA.................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATC....................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0
............................................................GGAATGTCACTGGTGCTCCTG.......................................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAAGCTCCACCATTG...................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCCTTG...................................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0
.............................................................................CCTGCAGATTAACCTCCACCATTG...................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0
.................................................................................CAGATAAACCTCCACCATTGTAAGG................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0
..............................................................................CTGCAGATGAACCTCCACCAT........................................................................................................................................................ 21 1 20 0.05 1 0 0 0 1 0 0 0
.....................................................................CTGATGCTCCTGCAGATAAACC................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGAGC................................................................................................................................................... 25 3 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TGCAGATGAACCTCCACCATT....................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAATCTCCACCATTG...................................................................................................................................................... 22 1 20 0.05 1 0 1 0 0 0 0 0
..............................................................................CTGCAGATAAACCTCCACC.......................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0
..................................................GTGAGCCTCAGGAGTTTT....................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0 0
...............................................................................CGCAGATAAACCTCCACCATTGTAAG.................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0
......................................................................................AAACCTCCACCATTGTAAGGC................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGCAAG.................................................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0
...............................................................................TGCAGATAAACCTCCACCATTGTAAGA................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0

Anti-sense strand reads

CCCTCCTCGACCTCAGGGGGCTGTCGCTGGACCTTTGTTGTTACCACCTCCACTCGGAGTCCTTACAGTGACTGCGAGGACGTCTATTTGGAGGTGGTAACATTCCGTCGAACGCGACGAGATGACGACGTAGATCGGTTACCACCTCGGATTTTTCAGGAGTAAATCCTAGGAGCCTTTGTCCCAGAAGCCAGACTCCTGAGGTTTGATATTCGATATGCATCGACTTTGGCGTCCAATTTAAGCATGGA
***************************************************...........(((((((((((...((((((....)))))).....((((....))))))))))))))).........((((((...((((((((.......)))))))).....))))))******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 SRR902010
ovaries
 M059
embryo
 V112
male body		 GSM343916
embryo
 GSM444067
head
 M062
head
...............................................................................................................................................................................................................................CGACTTTGGCGTCCAATTTAAGCAT... 25 0 2 50.50 101 16 80 5 0 0 0 0 0
..........................................................................................................................................................................AGGAGCCTTTGTCCCAGAAGCCAGACT...................................................... 27 0 1 22.00 22 19 0 1 1 1 0 0 0
...............................................................................................................................................................................CCTTTGTCCCAGAAGCCAGACTCCT................................................... 25 0 2 15.50 31 20 0 10 1 0 0 0 0
.........................................................................................................................................................................TAGGAGCCTTTGTCCCAGAAGCCAGACT...................................................... 28 0 1 9.00 9 8 0 0 0 0 1 0 0
................................................................................................................................................................................................................................GACTTTGGCGTCCAATTTAAGCAT... 24 0 2 7.50 15 1 11 2 0 1 0 0 0
...........................................................................................................................................................................GGAGCCTTTGTCCCAGAAGCCAGACT...................................................... 26 0 1 7.00 7 7 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATCGACTTTGGCGTCCAATTTAAGCAT... 27 0 2 5.00 10 0 10 0 0 0 0 0 0
..........................................................................................................................................................................AGGAGCCTTTGTCCCAGAAGCCAGAC....................................................... 26 0 1 5.00 5 5 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGACTTTGGCGTCCAATTTAAGCATG.. 26 0 2 3.50 7 2 4 0 1 0 0 0 0
.........................................................................................................................................................................TAGGAGCCTTTGTCCCAGAAGCCAGAC....................................................... 27 0 1 3.00 3 2 0 0 1 0 0 0 0
................................................................................................................................................................................CTTTGTCCCAGAAGCCAGACTCCT................................................... 24 0 2 3.00 6 6 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................ACTTTGGCGTCCAATTTAAGCAT... 23 0 2 2.50 5 2 3 0 0 0 0 0 0
......................................................................................................................................................................................................................GATATGCATCGACTTTGGCGTCCAA............ 25 0 2 2.50 5 0 5 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGATATGCATCGACTTTGGCGTCCAAT........... 27 0 2 2.50 5 1 4 0 0 0 0 0 0
............................GGGCCTTGGTTGTTACTACCT.......................................................................................................................................................................................................... 21 3 2 2.50 5 5 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GATATGCATCGACTTTGGCGTCCAAT........... 26 0 2 2.00 4 0 4 0 0 0 0 0 0
..................................................................................................................................................................................TTGTCCCAGAAGCCAGACTCCT................................................... 22 0 2 2.00 4 3 0 0 1 0 0 0 0
............................................................................................................................................................................GAGCCTTTGTCCCAGAAGCCAGACT...................................................... 25 0 2 2.00 4 4 0 0 0 0 0 0 0
.............................................................................................................................................................................AGCCTTTGTCCCAGAAGCCAGACTCCT................................................... 27 0 2 2.00 4 4 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GACTTTGGCGTCCAATTTAAGCATG.. 25 0 2 2.00 4 0 3 1 0 0 0 0 0
........................................................................................................................................................................CTAGGAGCCTTTGTCCCAGAAGCCAGACT...................................................... 29 0 1 2.00 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CATCGACTTTGGCGTCCAATTTAAGCAT... 28 0 2 2.00 4 0 3 0 0 1 0 0 0
...............................................................................................................................................................................CCTTTGTCCCAGAAGCCAGACT...................................................... 22 0 2 1.50 3 2 0 0 1 0 0 0 0
..........................................................................................................................................................................................................................TGCATCGACTTTGGCGTCCAAT........... 22 0 2 1.50 3 3 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTTTGGCGTCCAATTTAAGCAT... 22 0 2 1.50 3 0 3 0 0 0 0 0 0
...............................................................................................................................................................................CCTTTGTCCCAGAAGCCAGACTCC.................................................... 24 0 2 1.50 3 2 0 0 1 0 0 0 0
.............................................................................................................................................................................AGCCTTTGTCCCAGAAGCCAGACT...................................................... 24 0 2 1.50 3 3 0 0 0 0 0 0 0
...............................................................TACAGTGACTGCGAGGACGTCTATTT.................................................................................................................................................................. 26 0 3 1.33 4 2 0 1 0 0 0 1 0
.............................................................................GGACGTCTATTTGGAGGTGGTAACAT.................................................................................................................................................... 26 0 20 1.30 26 26 0 0 0 0 0 0 0
...................................................................................................................................................................AAAAACTAGGAGCCTTTGT..................................................................... 19 2 2 1.00 2 1 0 0 0 0 1 0 0
........................................................................................................................................................................CTAGGAGCCTTTGTCCCAGAAGGCAGACT...................................................... 29 1 1 1.00 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................CGACTTTGTCGTCCAATTTAAGCAT... 25 1 2 1.00 2 0 2 0 0 0 0 0 0
..................................................................................................................................................................TTAATCCTAGGAGTCTTTGTA.................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................TCGGTTACCACCTTGGACTATT............................................................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGATATGCATCGACTTTGGCGTCCAA............ 26 0 2 1.00 2 0 2 0 0 0 0 0 0
.........................................................................................................................................................................TAGGAGCCTTTGTCCCAGGAGCCAGACT...................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................GGAGCCTTTGTCCCAGAAGCCAGACTCC.................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATGCATCGACTTTGGCGTCCAATT.......... 24 0 2 1.00 2 0 2 0 0 0 0 0 0
........................................................................................................................................................TTTTCAGGAGTAAATCCTAGGAGCCT......................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................GGAGCCTTTGTCCCAGAAGCCAGAC....................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GACTTTGGCGTCCAATTTAAGCA.... 23 0 2 1.00 2 2 0 0 0 0 0 0 0
............................................................................................................CGAACGCGACAAGATGACG............................................................................................................................ 19 1 1 1.00 1 0 0 0 0 0 0 1 0
...................................................................................................................................................................AAAACCTAGGAGCCTTTGT..................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCGACTTTGGCGTCCAATTTAAGCAT... 26 0 2 1.00 2 0 2 0 0 0 0 0 0
...........................................................................................................................................................................GGAGCCTTTGTCCCAGAAGCCAGACTC..................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGACTTTGGCGTCCAATTTAAGCA.... 24 0 2 1.00 2 2 0 0 0 0 0 0 0
............................................................................................................................................................................................AGCCAGACTCCTGAGGTTTGATAT....................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................GCCTTTGTCCCAGAAGCCAGACT...................................................... 23 0 2 1.00 2 2 0 0 0 0 0 0 0
.......................................................................CTGCGAGGACGTCTATTTGGAGGT............................................................................................................................................................ 24 0 17 0.71 12 5 0 4 0 3 0 0 0
........................................................................................................................................................................................................................TATGCATCGACTTTGGCGTCCAAT........... 24 0 2 0.50 1 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................ATCGACTTTGGCGTCCAATT.......... 20 0 2 0.50 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................TGATATGCATCGACTTTGGCGTCCAAT........... 27 1 2 0.50 1 0 1 0 0 0 0 0 0
............................................................................................................................................................................CAGCCTTTGTCCCAGAAGCCAGACTCCT................................................... 28 1 2 0.50 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................................AAGAGCCTTTGTCCCAGAAGCCAGAC....................................................... 26 1 2 0.50 1 0 0 1 0 0 0 0 0
........................................................................................................................................................................................................................AATGCATCGACTTTGGCGTCCAATT.......... 25 1 2 0.50 1 1 0 0 0 0 0 0 0
................GGGGCTGTCGCTGGACCTTTGTT.................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................GACTTTGGCATCCAATTTAAGCAT... 24 1 2 0.50 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TATGCATCGACTTTGGCGTCCAATT.......... 25 0 2 0.50 1 0 1 0 0 0 0 0 0
.................................................................................................................................................................................TTTGTCCCAGAAGCCAGACTCCT................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................ATATGCATCGACTTTGGCGTCCAA............ 24 0 2 0.50 1 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................TTGGCGTCCAATTTAAGCAT... 20 0 2 0.50 1 0 0 1 0 0 0 0 0
............................................................................................................................................................................................................................CATCGACTTTGGCGTCCAATT.......... 21 0 2 0.50 1 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TATGCATCGACTTTGGCGTCCAA............ 23 0 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................CTTTGTCCCAGAAGCCAGACTCC.................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................TTGTCCCAGAAGCCAGACT...................................................... 19 0 2 0.50 1 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................CCCTTTGGCGTCCAATTTAAGCAT... 24 2 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................GGAGGTGGTAACATTCCGT............................................................................................................................................... 19 0 20 0.50 10 10 0 0 0 0 0 0 0
...............GGGGGCTGTCGCTGGACCTTTGTT.................................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................TTTGTCCCAGAAGCCAGACTC..................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CCTCCATCGACTTTGGCGTCCAATT.......... 25 3 2 0.50 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................CTTTGTCCCAGAAGCCAGACT...................................................... 21 0 2 0.50 1 0 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................ACTTTGGCGTCCAATTTAAGCATG.. 24 0 2 0.50 1 0 0 0 1 0 0 0 0
...............................................................................................................................................................................CCTTTGTCCCAGAAGCCAGAC....................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGCATCGACTTTGGCGTCCAATTTAAGC..... 28 0 2 0.50 1 1 0 0 0 0 0 0 0
.............................GGCCTTGGTTGTTACTACCTC......................................................................................................................................................................................................... 21 3 6 0.50 3 3 0 0 0 0 0 0 0
...........CTCAGGGGGCTGTCGCTGGACCTT........................................................................................................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................ATGCATCGACTTTGGCGTCCAAT........... 23 0 2 0.50 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................CTTTGTCCCAGAAGCCAGACTACT................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGACTTTGGCGTCCAATTTATGCAT... 25 1 2 0.50 1 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................CGACTTTGGCATCCAATTTAAGCAT... 25 1 2 0.50 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................................TTGTCCCAGAAGCCAGACTCCTGA................................................. 24 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................GTCCCAGAAGCCAGACTCCT................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................CGACTTTGGCGTCCAATTTAAGAAT... 25 1 2 0.50 1 0 0 0 1 0 0 0 0
......................................................................ACTGCGAGGACGTCTATTT.................................................................................................................................................................. 19 0 20 0.40 8 7 0 0 0 0 1 0 0
......................................................................................................................................................................................................................GATATGCATCGACTTTGGCGTCCA............. 24 0 15 0.33 5 4 0 1 0 0 0 0 0
....................................................................................................................ACGAGGCGAAGACGTAGATCG.................................................................................................................. 21 3 6 0.33 2 2 0 0 0 0 0 0 0
...............................................................................................................................................................................CCTTTGTCCCAGAAGCCAGACTCCTT.................................................. 26 1 3 0.33 1 1 0 0 0 0 0 0 0
................................................................ACAGTGACTGCGAGGACGTCTATTT.................................................................................................................................................................. 25 0 3 0.33 1 0 0 0 0 1 0 0 0
..............................................................TTACAGTGACTGCGAGGACGTCTATT................................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................GGAGCCTTTGTTCCAGAAGCCAGACT...................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0
..........................................................................................................................................................................TGGAGCCTTTGTCCCAGAAGCCAGACT...................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0 0
................................................................ACAGTGACTGAGAGGACGTCTAT.................................................................................................................................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGATATGCATCGACTTTGGCGT................ 22 0 15 0.33 5 3 1 0 0 0 0 0 1
.............................................................................................................................................................................................................TTGAGATTCGATATACATC........................... 19 2 3 0.33 1 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................TCGATATGCATCGACTTTGGCGT................ 23 0 15 0.27 4 4 0 0 0 0 0 0 0
.............................................................CTTACAGGGACTGCGAGGACGTCTATTT.................................................................................................................................................................. 28 1 4 0.25 1 0 0 0 0 1 0 0 0
............................GGGCCTTGGTTGTTACTACC........................................................................................................................................................................................................... 20 3 4 0.25 1 1 0 0 0 0 0 0 0
....................................................................TGACTGCGATGACGTCTATTT.................................................................................................................................................................. 21 1 4 0.25 1 1 0 0 0 0 0 0 0
....................................................................TGACTGCGAGGACGTCTATTT.................................................................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0 0 0
..........................................................................CGAGGACGTCTATTTGGAGGTGGT......................................................................................................................................................... 24 0 16 0.25 4 0 0 1 2 0 1 0 0
..................................................................AGTGACTGCGAGGACGTCTATTT.................................................................................................................................................................. 23 0 4 0.25 1 1 0 0 0 0 0 0 0
...................................................................ATGACTGCGAGGACGTCTATT................................................................................................................................................................... 21 1 4 0.25 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGATATGCATCGACTTTGGCGTCCA............. 25 0 15 0.20 3 3 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GATATGCATCGACTTTGGCGT................ 21 0 15 0.20 3 3 0 0 0 0 0 0 0
....................................GTTGTTACCACCTCCACTCGGAGTCCT............................................................................................................................................................................................ 27 0 5 0.20 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGAAATGCATCGACTTTGGCGT................ 22 1 15 0.20 3 2 0 0 1 0 0 0 0
.......................................TTTACCACCTCCACTCGGAGTCAT............................................................................................................................................................................................ 24 2 10 0.20 2 2 0 0 0 0 0 0 0
..................................................................................................................................................................................TTGTCCCAGAAGCCAGACTCAT................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0 0
.....................................................................GACTGCGAGGACGTCTATTT.................................................................................................................................................................. 20 0 5 0.20 1 1 0 0 0 0 0 0 0
.......................................TTTACCACCTCCACTCGGAGTCATT........................................................................................................................................................................................... 25 2 10 0.20 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................AACACCTAGGAGCCTTTGT..................................................................... 19 2 5 0.20 1 1 0 0 0 0 0 0 0
..........................................ACCACCTCCACTCGGAGTCCTTACAGT...................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0 0 0
............................GGGGCTTGGTTGTTACCACCT.......................................................................................................................................................................................................... 21 3 5 0.20 1 1 0 0 0 0 0 0 0
......................................................................ACTGCGAGGACGTCTATTTGGAGGT............................................................................................................................................................ 25 0 16 0.19 3 3 0 0 0 0 0 0 0
..................................ATGTTGTTACCACCTCCACTCGGAGT............................................................................................................................................................................................... 26 1 6 0.17 1 1 0 0 0 0 0 0 0
...............................CCTTGGTTGTTACTACCTCT........................................................................................................................................................................................................ 20 3 18 0.17 3 3 0 0 0 0 0 0 0
...........................................................................GAGGACGTCTATTTGGAGGTG........................................................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0 0
...................................................................................CTATTTGGAGGTGGTAACATT................................................................................................................................................... 21 0 20 0.15 3 1 0 0 0 1 0 1 0
.......................................TTTACCACCTCCACTCGGAGTCCT............................................................................................................................................................................................ 24 1 7 0.14 1 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTCGATATGCATCGACTTTGGCGTCCA............. 27 0 14 0.14 2 2 0 0 0 0 0 0 0
................................................................................................................................CGTAGATCTGATATCACCT........................................................................................................ 19 3 7 0.14 1 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................................TTCGATATGCATCGACTTTGGCGT................ 24 0 14 0.14 2 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGATATGCATCGACTTTGGCGTCCA............. 26 0 15 0.13 2 2 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGATATGCATCGACTTTGGCG................. 21 0 15 0.13 2 2 0 0 0 0 0 0 0
............................................CACCTCCACTCGGAGTCATTACAGT...................................................................................................................................................................................... 25 1 8 0.13 1 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................CGATATGCATCGACTTTGGCAT................ 22 1 17 0.12 2 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................................................ATGCATCGACTTTGGCGTCCA............. 21 0 18 0.11 2 2 0 0 0 0 0 0 0
....................................GTTGTTACCACCTCCACT..................................................................................................................................................................................................... 18 0 18 0.11 2 2 0 0 0 0 0 0 0
.........................................TACCACCTCCACTCGGAGTCAT............................................................................................................................................................................................ 22 1 10 0.10 1 0 0 0 0 0 1 0 0
.............................................................................GGACGTCTATTTGGAGGTGGTAACATT................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0 0 0
......................................TTTTACCACCTCCACTCGGAGTCAT............................................................................................................................................................................................ 25 2 10 0.10 1 1 0 0 0 0 0 0 0
.........................................................AGGCCTTGCAGTGACTGGG............................................................................................................................................................................... 19 3 11 0.09 1 1 0 0 0 0 0 0 0
..............................ACCTTGGTTGTTACTACCTCT........................................................................................................................................................................................................ 21 3 12 0.08 1 1 0 0 0 0 0 0 0
............................GGGCCTTGGTTGTTACTAC............................................................................................................................................................................................................ 19 3 13 0.08 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................CCAGACTCCTGAGGATTGATATTCGAT.................................. 27 1 14 0.07 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................CCAGACTCCTGAGGATTGATATTCG.................................... 25 1 14 0.07 1 1 0 0 0 0 0 0 0
..........................................................................CGAGGACGTCTATTTGGAGGTGGTA........................................................................................................................................................ 25 0 15 0.07 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................ACGATATGCATCGACTTTGGCGTCCA............. 26 1 15 0.07 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TCGATATGCATCGACTTTGGCGTCC.............. 25 0 15 0.07 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GATATGCATCGGCTTTGGCGTCCA............. 24 1 15 0.07 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................GATATGCATCGACTTTGGCGTCC.............. 23 0 15 0.07 1 1 0 0 0 0 0 0 0
.........................................................................GCGAGGACGTCTATTTGGAGGTGGT......................................................................................................................................................... 25 0 15 0.07 1 1 0 0 0 0 0 0 0
........................................................................TGCGAGGACGTCTATTTGGAGGTGGT......................................................................................................................................................... 26 0 15 0.07 1 0 0 0 0 1 0 0 0
..........................................................................CGAGGACGTCTATTTGGAGGTGGTAACAT.................................................................................................................................................... 29 0 15 0.07 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................................................CGATATGCATCGACTTTGGCGTCT.............. 24 1 15 0.07 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................CGATATGCATCGACTTTGGCGTCTA............. 25 1 15 0.07 1 1 0 0 0 0 0 0 0
................................................................ACAGCGACTGCGAGGACGTCTATTT.................................................................................................................................................................. 25 1 16 0.06 1 0 0 0 0 0 1 0 0
......................................................................ACTGCGATGACGTCTATTTGGAGGT............................................................................................................................................................ 25 1 16 0.06 1 1 0 0 0 0 0 0 0
...........................TGGGCCTTGGTTGTTACTA............................................................................................................................................................................................................. 19 3 16 0.06 1 1 0 0 0 0 0 0 0
........................................................................TGCGAGGACGTCTATTTGGAGGT............................................................................................................................................................ 23 0 18 0.06 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TATGCATCGACTTTGGCGTCCA............. 22 0 18 0.06 1 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................TATGCATCGACTTTGGCGTCC.............. 21 0 18 0.06 1 0 0 1 0 0 0 0 0
........................................................................TGCGAGGACGTCTATTTGGAGG............................................................................................................................................................. 22 0 19 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................AACGCGACGAGAAGACGAGGT........................................................................................................................ 21 2 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................ACTATTTGGAGGTGGTAACATTCCGT............................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0
.................................................................................GTCTATTTGGAGGTGGTAACA..................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................AATGCGAGGACGTCTATT................................................................................................................................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................AGCGACTGCGTGGACGTCTATTT.................................................................................................................................................................. 23 2 20 0.05 1 0 0 0 0 0 1 0 0
..............................................................................................................AACGCGACGAGATGACGAGGT........................................................................................................................ 21 1 20 0.05 1 0 0 1 0 0 0 0 0
.......................................................................................TTGGAGGTGGTAACATTCCGTC.............................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................................................TTTGGAGGTGGTAACATTCCGTC.............................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0 0
............................................................................TGGACGTCTATTTGGAGGTGGTAACAT.................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................GAGGACGTCTATTTGGAGGTGG.......................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................CGAGGACGTCTATTTGGAGG............................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................GCCGTCTATTTGGAGGTGGTAACAT.................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 0 1 0 0
.................................................................................GTCTATTTGGAGGTGGTAACAT.................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 1 0 0 0
................................................................................AATCTATTTGGAGGTGGTAACAT.................................................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................CGTTTATTTGGAGGTGGTAACAC.................................................................................................................................................... 23 2 20 0.05 1 0 0 0 0 0 1 0 0
.................................................................................GTCTATTTGGTGGTGGTAACATT................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 1 0 0
.....................................................................TAATGCGAGGACGTCTATT................................................................................................................................................................... 19 2 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TCGACTGTGGAGTACAATTT......... 20 3 20 0.05 1 0 0 0 0 0 1 0 0
...............................................................................ACGTCTATTTGGAGGTGGTAACATTC.................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0 0 0
................................................................................CGTCTATTTGGAGGTGGTAA....................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 0 0 1 0
..............................................................................GACGTCTATTTAGAGGTGGTAACAT.................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................CTTTGGCGTCCAGTTTAAGCATG.. 23 1 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................CGAGGACGTCTATTTGGAG.............................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0
............................GGAGCTTGGTTGTTACTAC............................................................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0
....................................................................................TATTTGGAGGTGGTAACATTC.................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1a:5331825-5332075 + dps_2519 GGGAGGAGCTGGAG-----TCCCCCGACAGCGACCTGGAAACAACAATGGTGGAGGTGAGCCTCAGGAATGTCACTGACGCTCCTGCAGATAAACCTCCACCATTGTAAGGCAGCTTGCGCTGCTCTACTGCTGCATCTAGCCAATGGTGGAGCCTAAAAAGTCCTCATTTAGGATCCT--------CGGAAACAGGGTCTTCGGTCTGAGGACTCCAAACTATAAGCTATACGTAGC-TGAAACCGCAGGTTAAATTCGTACCT
droPer2 scaffold_11:1963175-1963425 + GGGAGGAGCTGGAG-----TCCCCCGACAGCGACCTGGAAACAACAATGGTGGAGGTGAGCCTCAGGAATGTCACTGACGCTCCTGCAGATAAACCTCCACCATTGTAAGGCAGCTTGCGCTGCTCTACTGCTGCATCTAGCCAATGGTGGAGCCTAAAAAGTCCTCATTTAGGATCCT--------CGGAAACAGGGTCTTCGGTCTGAGGACTCCAAACTATAAGCTATACGTAGC-TGAAACCGCAGGTTAAATTCGTACCT
droGri2 scaffold_15057:5308-5569 - AGGACGATTTTA--CGCTGTCGGACGAGGACGACAGCAACAACACGGAGGTGAGGGGGAAATCTCCGGATGTCCTTGAGACTACGGCAGATAAACCTTCACCACAGTAAAGCAGCATCCGCTGCTCTGATGCTCCGCCTGGCTGGAGGCGGAGACGATATAGTACTAGTCCAAGAACCTTGGGTGATTGGAGGCAAGGTTTGCGGACTAGGAAATAAAAATTATAAGCTATTAGTAGC-TGGAAACGAAGGTAAAAAACGTACCT
droAna3 scaffold_460:1724-1982 + AGGAGGACTCTT--TGCTGGGCTCCGACACCGAGGCGGAGGTTACTGTGGTGGAG---AACCTAAAGGATGTCCCTGACATTCCTGCAGATAAACCTCCATCACAGTAAGGTGGCTTCCGCCGCCCTCCTGCTCCATCTTGCAGAGGATGGAGCTGACGTGGCCCTCATCCAAGAATCCTGGATCCACGGAGACAGGATTCTCGGTCTGGGGGCGTCGGACTTCAGGCTGTACACAGC-CGATGTAACAGGTAAAAAGCGAGCAT
droBip1 scf7180000392014:39981-40239 - AGGAGGACTCTC--TGCTGAGCTCCGAGACGGAGGCAGAAATAACTGTGGTGGAG---ACTTGTAAGAATGTCCCTGACGATCTTACAAATAAACCTCCACCACAGTAAAGCGGCGTCAGCTGCCCTCCTACTCCACCTCGCCAAGAGTGGAGCTGATGTGGCCCTCATCCAGGAACCCTGGATCCTAGGAGACAGGATTCTTGGGTTGGGGGCGTCGGAGTATAGGCTCTGCAAAGC-CGATACTACAGGTAAAAGGCGAGCCT
droEle1 scf7180000490986:31814-32033 + -------------------------------------------ACTGTGGTGGAGCAGAGCTGCGCAAATGTCGCTTAGACTACTGCAAGTGAACCTCCACCACTGAAAGGCAGCGTCTGCTGCACTATTGCTTCGCTTGGCTGACAGCAGTGCAGATATAGTCCTGGCACAATACTCTTGGGTGGTAGGAGGCAAGGTT-CTGGACAAGGCACCACGGAATACAAGTTTATACTTGGTC-GATAAGGAGGTAAAATTCGTACCT
droRho1 scf7180000771993:5583-5835 + AAGTGGACCTG--------AG---CGATTCGGAGGCCGACGTTACTGTGGTGGAGGTTGCAGCTGGGGATGTCGCTAAGACTCCTGCAGATCAACCTACATCACAGTAAAGCAGCGTCCGCTGCTCTTTTGCTTCGCCTGGCCAAAGGCGAAGCCGACGTGGTCTTAGTTCAGGAACCCTGGGTGGCAGGAGGCAGGGTTTCTGGACTGGGAACAAAAGACTACAAGCTTATGCTTGACC-CCAAACAAGGTAAAATTCGAACCT
droBia1 scf7180000302283:54985-55219 - CGAAAG--------------------------AGGCCGATGTGACCGTGGTGGAGGTTGCAGCTGTAGATA---TTAAGACCTCTGCAAATCAACCTACACCCCAGTAAAGCAGCGTTTGATGCACAACTGCTTCGCCTGACCGAAGGCTGGGACAACCTGGTCCAAGAACGTGAACTTCGGGTAGTAGGAGGCAAGGTTGCTGGTCTAGGAACAACAGAATACAAGCTTATGCTTGACC-CCAAAGGAGATAAAATTCGAACCT
droTak1 scf7180000414505:25875-26126 - GAGGA--AGTGGAG-----G----CGCCTCGGAGGCCGATGTTACTGTGGTGGAGGTTACAGCTGGGGATGTCGGTAAGACTCCTGCAG-TAAACCTACACCACAGTAAAGCAGCGTCCGCTGCTCTATCGCTTCGCCTGGCCAAGGGCGAAGCCGACGTGGTCCTAGTACAGGAACCTTGGGTAGTAGGAGGCAAGGTTGCTGGACTAGGAACGAGAGAGTATAAGCTAATGCTTGACC-CCAAAGAAGGTAAAATTCGAACCT
droYak3 v2_chrX_random_046:77798-78035 + AGGAGG--------------------------GAACCGACACAACCGTGGTGGAGAGGCCCACAGCAGATGTCCGTGAGGCTTCTGCAGATAAACCTCCACCATAGTAAGGCAGCTTCCGCTGCTCTTCAACTCCATCTGGCTGAAGATGGAGTTGACATAGTCCTGATCCAGGAACCTTGGATAGTGGGAGGAAAGGTTTCAGGATTAGGGACTAAGGAATATAAGCTTCTCACAGC-TCCCAGCGAAGGTAAAATAAGGGCCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GGGAGGAGCTGGAG-----TCCCCCGACAGCGACCTGGAAACAACAATGGTGGAGGTGAGCCTCAGGAATGTCACTGACGCTCCTGCAGATAAACCTCCACCATTGTAAGGCAGCTTGCGCTGCTCTACTGCTGCATCTAGCCAATGGTGGAGCCTAAAAAGTCCTCATTTAGGATCCT--------CGGAAACAGGGTCTTCGGTCTGAGGACTCCAAACTATAAGCTATACGTAGC-TGAAACCGCAGGTTAAATTCGTACCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................TGCAGATAAACCTCCACCATTGT..............................................................................................................................................................23204.559108420000500
....................................................................................TGCAGATAAACCTCCACCATTGTAAG...........................................................................................................................................................26203.256505831000300
....................................................................................TGCAGATAAACCTCCACCATTGTA.............................................................................................................................................................24201.452902900000000
...................................................................................................................................................................................................................................................ACCGCAGGTTAAATTCGTA...1921.0020200000000
..................................................................................CCTGCAGATAAACCTCCACCATTG...............................................................................................................................................................24200.901801701000000
....................................................................................TGCAGATAAACCTCCACCATTGTAAGGC.........................................................................................................................................................28200.801601510000000
...................................................................................CTGCAGATAAACCTCCACCATTG...............................................................................................................................................................23200.551101100000000
................................................................................................................................................................................................ACAGGGTCTTCGGTCTGAGGA....................................................2120.5010010000000
..............................................................................................................................................................................................AAACAGGGTCTTCGGTCTGAGGACT..................................................2520.5010100000000
..................................................................................................................................................................................T--------CGGAAACAGGGTCTTCGGTC..........................................................2120.5010100000000
....................................................................................TGCAGATAAACCTCCACCAT.................................................................................................................................................................20200.501001000000000
.................................................................................................................................................................................CT--------CGGAAACAGGGTCTTCGGTC..........................................................2220.5010100000000
.....................................................................................GCAGATAAACCTCCACCATTGT..............................................................................................................................................................22200.4590900000000
.....................................................................................GCAGATAAACCTCCACCATTGTAAG...........................................................................................................................................................25200.3060600000000
...................................................................................CTGCAGATAAACCTCCACCAT.................................................................................................................................................................21200.3060500000100
....................................................................................TGCAGATAAACCTCCACCATTGTAA............................................................................................................................................................25200.2550000000500
....................................................................................TGCAGATAAACCTCCACCATTGTAAA...........................................................................................................................................................26200.2550500000000
.......................................................................................AGATAAACCTCCACCATTGTA.............................................................................................................................................................21200.2550300000200
....................................................................................TGCAGATAAACCTCCACCA..................................................................................................................................................................19200.2040400000000
................................................................................CTCCTGCAGATAAACCTCCAC....................................................................................................................................................................21200.1530201000000
......................................................................................CAGATAAACCTCCACCATTGT..............................................................................................................................................................21200.1530300000000
.....................................................................................GCAGATAAACCTCCACCATT................................................................................................................................................................20200.1530300000000
...................................................................................CTGCAGATAAACCTCCACCA..................................................................................................................................................................20200.1530300000000
.............................................................................................................................................................................GATCCT--------CGGAAACAGGGTCTTT..............................................................22140.1420200000000
.........................................................................................ATAAACCTCCACCATTGTA.............................................................................................................................................................19200.1020100010000
....................................................................................TGCAGATAAACCTCCACCATTGTAAAA..........................................................................................................................................................27200.1020200000000
..............................................................TCAGGAATGTCACTGACG.........................................................................................................................................................................................18100.1010100000000
....................................................................................TGCAGATAAACCTCCACCATTGTAAGGCA........................................................................................................................................................29200.1020200000000
................................................................................................TCCACCATTGTAAGGCAGC......................................................................................................................................................19200.1020000000020
.....................................................................................GCAGATAAACCTCCACCATTGTAAGG..........................................................................................................................................................26200.1020200000000
.................................................................................TCCTGCAGATAAACCTCCACCATTG...............................................................................................................................................................25200.1020200000000
..................................................................................CCTGCAGATAAACCTCCACCA..................................................................................................................................................................21200.1020200000000
................................................................................CTCCTGCAGATAAACCTCCACCATTG...............................................................................................................................................................26200.1020200000000
....................................................................................TGCAGATAAACCTCCACCATTG...............................................................................................................................................................22200.1020000200000
.....................................................................................................................................................................................................................................ATACGTAGC-TGAAACCGCAGG..............21180.0610100000000
...................................................................................CTGCAGATAAACCTCCACCATT................................................................................................................................................................22200.0510100000000
........................................................................................GATAAACCTCCACCATTGT..............................................................................................................................................................19200.0510100000000
.....................................................................................GCAGATAAACCTCCACCATTGTAAGGC.........................................................................................................................................................27200.0510100000000
........................................................................................GATAAACCTCCACCATTG...............................................................................................................................................................18200.0510100000000
..........................................................................................TAAACCTCCACCATTGTAAGGCA........................................................................................................................................................23200.0510100000000
......................................................................................CAGATAAACCTCCACCATTGTA.............................................................................................................................................................22200.0510100000000
...................................................................................CTGCAGATAAACCTCCACCATTGTA.............................................................................................................................................................25200.0510100000000
....................................................................................TGCAGATAAACCTCCACCATC................................................................................................................................................................21200.0510010000000
......................................................................................CAGATAAACCTCCACCATTGTAAGG..........................................................................................................................................................25200.0510100000000
....................................................................................TGCAGATAAACCTCCACCATTGAGC............................................................................................................................................................25200.0510100000000
...................................................................................CTGCAGATAAACCTCCACC...................................................................................................................................................................19200.0510100000000
...........................................................................................AAACCTCCACCATTGTAAGGC.........................................................................................................................................................21200.0510100000000
....................................................................................TGCAGATAAACCTCCACCATTGTAAGA..........................................................................................................................................................27200.0510010000000
droPer2
GGGAGGAGCTGGAG-----TCCCCCGACAGCGACCTGGAAACAACAATGGTGGAGGTGAGCCTCAGGAATGTCACTGACGCTCCTGCAGATAAACCTCCACCATTGTAAGGCAGCTTGCGCTGCTCTACTGCTGCATCTAGCCAATGGTGGAGCCTAAAAAGTCCTCATTTAGGATCCT--------CGGAAACAGGGTCTTCGGTCTGAGGACTCCAAACTATAAGCTATACGTAGC-TGAAACCGCAGGTTAAATTCGTACCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................AGCTATACGTAGC-TGAAACCGCAGG..............25200.153030000
..............................................................................................................................................................................ATCCT--------CGGAAACAGGGTC.................................................................18200.051010000
......................................................................................................................................................................................................................................TACGTAGC-TGAAACCGCAG...............19200.051010000
droGri2
AGGACGATTTTA--CGCTGTCGGACGAGGACGACAGCAACAACACGGAGGTGAGGGGGAAATCTCCGGATGTCCTTGAGACTACGGCAGATAAACCTTCACCACAGTAAAGCAGCATCCGCTGCTCTGATGCTCCGCCTGGCTGGAGGCGGAGACGATATAGTACTAGTCCAAGAACCTTGGGTGATTGGAGGCAAGGTTTGCGGACTAGGAAATAAAAATTATAAGCTATTAGTAGC-TGGAAACGAAGGTAAAAAACGTACCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AGGAGGACTCTT--TGCTGGGCTCCGACACCGAGGCGGAGGTTACTGTGGTGGAG---AACCTAAAGGATGTCCCTGACATTCCTGCAGATAAACCTCCATCACAGTAAGGTGGCTTCCGCCGCCCTCCTGCTCCATCTTGCAGAGGATGGAGCTGACGTGGCCCTCATCCAAGAATCCTGGATCCACGGAGACAGGATTCTCGGTCTGGGGGCGTCGGACTTCAGGCTGTACACAGC-CGATGTAACAGGTAAAAAGCGAGCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................CATCACAGTAAGGTGGCTTCCGCCGC.............................................................................................................................................26200.80161600000
..................................................................................................CATCACAGTAAGGTGGCTTCCGCCGCC............................................................................................................................................27200.5511830000
.......CTCTT--TGCTGGGCTCCGACACC..........................................................................................................................................................................................................................................22200.408260000
...................................................GGAG---AACCTAAAGGATGTCCCTG............................................................................................................................................................................................2330.331100000
...................................................GGAG---AACCTAAAGGATGTCCCC.............................................................................................................................................................................................2240.251010000
.....................................................................................................................................................................................GATCCACGGAGACAGGATTCTCG.............................................................23200.204040000
.......CTCTT--TGCTGGGCTCCGACACCGA........................................................................................................................................................................................................................................24200.204400000
.......................................................................................................................................................AGCTGACGTGGCCCTCATCCAAG...........................................................................................23200.204400000
........TCTT--TGCTGGGCTCCGACACCGAGGCG....................................................................................................................................................................................................................................27200.153210000
.......CTCTT--TGCTGGGCTCCGACAC...........................................................................................................................................................................................................................................21200.153300000
..GAGGACTCTT--TGCTGGGCTCCGACACC..........................................................................................................................................................................................................................................27200.153300000
.......CTCTT--TGCTGGGCTCCGACACCG.........................................................................................................................................................................................................................................23200.153300000
.......CTCTT--TGCTGGGCTCCGACACCGAG.......................................................................................................................................................................................................................................25200.102200000
.....GACTCTT--TGCTGGGCTCCGACA............................................................................................................................................................................................................................................22200.102200000
.........................................................................................................................................CTTGCAGAGGATGGAGCTGACG..........................................................................................................22200.102200000
................................................................................................................................................................................................ACAGGATTCTCGGTCTGGGGGCGTC................................................25200.102200000
.................................................................................................................................................................................................CAGGATTCTCGGTCTGGGGGCGTC................................................24200.102200000
....................................................................................................TCACAGTAAGGTGGCTTCCGCCGC.............................................................................................................................................24200.102200000
......ACTCTT--TGCTGGGCTCCGACACCGAG.......................................................................................................................................................................................................................................26200.102200000
..................................................................................................CATCACAGTAAGGTGGCTTCCG.................................................................................................................................................22200.102002000
....................................................................................TGCAGATAAACCTCCATCACAGT..............................................................................................................................................................23200.051001000
..GAGGACTCTT--TGCTGGGCTCCGA..............................................................................................................................................................................................................................................23200.051100000
........................................................................................GATAAACCTCCATCACAGTAAGGTGGCT.....................................................................................................................................................28200.051010000
...............................................................................................................................................................................................GACAGGATTCTCGGTCTGGGGGC...................................................23200.051000001
........TCTT--TGCTGGGCTCCGACACCGAGGC.....................................................................................................................................................................................................................................26200.051100000
...........T--TGCTGGGCTCCGACACCGAGG......................................................................................................................................................................................................................................22200.051100000
..........TT--TGCTGGGCTCCGACACCGAGG......................................................................................................................................................................................................................................23200.051100000
...............................................................................................................................................................................................GACAGGATTCTCGGTCTGG.......................................................19200.051100000
.......CTCTT--TGCTGGGCTCCGACA............................................................................................................................................................................................................................................20200.051100000
.......................................................................................................................................................AGCTGACGTGGCCCTCATCC..............................................................................................20200.051100000
.....GACTCTT--TGCTGGGCTCCGACACCGA........................................................................................................................................................................................................................................26200.051010000
........TCTT--TGCTGGGCTCCGACACC..........................................................................................................................................................................................................................................21200.051100000
..................................................................................................................................................................................................AGGATTCTCGGTCTGGGGGCGTCG...............................................24200.051100000
...........T--TGCTGGGCTCCGACACCGAGGCGG...................................................................................................................................................................................................................................25200.051100000
......ACTCTT--TGCTGGGCTCCGACA............................................................................................................................................................................................................................................21200.051100000
.................................................................................................................................................................................................CAGGATTCTCGGTCTGGGGG....................................................20200.051100000
................................................................................................................................................................................................ACAGGATTCTCGGTCTGGGG.....................................................20200.051100000
..................................................................................CCTGCAGATAAACCTCCATCACAGTAAGG..........................................................................................................................................................29200.051010000
...........................................................................................................................................................................................................GGTCTGGGGGCGTCGGACTTCAGGC.....................................25200.051010000
........TCTT--TGCTGGGCTCCGACACCGAGG......................................................................................................................................................................................................................................25200.051010000
......ACTCTT--TGCTGGGCTCCGACAC...........................................................................................................................................................................................................................................22200.051010000
..............................................................................................................................TCCTGCTCCATCTTGCAGAGGATGGAGC...............................................................................................................28200.051100000
..GAGGACTCTT--TGCTGGGCTCC................................................................................................................................................................................................................................................21200.051010000
..........................ACACCGAGGCGGAGGTTACTGTG........................................................................................................................................................................................................................23200.051100000
......................................................................................................................................................................................................................................TACACAGC-CGATGTAACAGGT.............21200.051000001
..........................................................................................................................................TTGCAGAGGATGGAGCTGACGTGG.......................................................................................................24200.051100000
....................................................................................................................................................................................................................................................TAACAGGTAAAAAGCGAGC..19200.051010000
.......................................................................................................................................................................................................................TCGGACTTCAGGCTGTACACAG............................22200.051100000
.................................................................................................CCATCACAGTAAGGTGGCTTCCGCCGC.............................................................................................................................................27200.051010000
...............................................................................................................................................................................................................TGGGGGCGTCGGACTTCAGGC.....................................21200.051001000
.......CTCTT--TGCTGGGCTCCGACACCGAGGC.....................................................................................................................................................................................................................................27200.051100000
...............GCTGGGCTCCGACACCGAGG......................................................................................................................................................................................................................................20200.051100000
..................................................................................................CATCACAGTAAGGTGGCTTCCGCCGCCA...........................................................................................................................................28200.051100000
.....GACTCTT--TGCTGGGCTCCGAC.............................................................................................................................................................................................................................................21200.051010000
..........................................................................................................................................TTGCAGAGGATGGAGCTGACGTGGCCC....................................................................................................27200.051100000
......................TCCGACACCGAGGCGGAGGTTACTGTG........................................................................................................................................................................................................................27200.051100000
.....GACTCTT--TGCTGGGCTCCGACACC..........................................................................................................................................................................................................................................24200.051010000
.....GACTCTT--TGCTGGGCTCCGACAC...........................................................................................................................................................................................................................................23200.051100000
.....................................................................................................................................................................................GATCCACGGAGACAGGATTCTCGGTCT.........................................................27200.051100000
....GGACTCTT--TGCTGGGCTCCGACA............................................................................................................................................................................................................................................23200.051100000
...........................................................................................................................................................................................CGGAGACAGGATTCTCGGTCTGGG......................................................24200.051100000
droBip1
AGGAGGACTCTC--TGCTGAGCTCCGAGACGGAGGCAGAAATAACTGTGGTGGAG---ACTTGTAAGAATGTCCCTGACGATCTTACAAATAAACCTCCACCACAGTAAAGCGGCGTCAGCTGCCCTCCTACTCCACCTCGCCAAGAGTGGAGCTGATGTGGCCCTCATCCAGGAACCCTGGATCCTAGGAGACAGGATTCTTGGGTTGGGGGCGTCGGAGTATAGGCTCTGCAAAGC-CGATACTACAGGTAAAAGGCGAGCCTSizeHit CountTotal NormTotal
No Reads
droEle1
-------------------------------------------ACTGTGGTGGAGCAGAGCTGCGCAAATGTCGCTTAGACTACTGCAAGTGAACCTCCACCACTGAAAGGCAGCGTCTGCTGCACTATTGCTTCGCTTGGCTGACAGCAGTGCAGATATAGTCCTGGCACAATACTCTTGGGTGGTAGGAGGCAAGGTT-CTGGACAAGGCACCACGGAATACAAGTTTATACTTGGTC-GATAAGGAGGTAAAATTCGTACCTSizeHit CountTotal NormTotal
No Reads
droRho1
AAGTGGACCTG--------AG---CGATTCGGAGGCCGACGTTACTGTGGTGGAGGTTGCAGCTGGGGATGTCGCTAAGACTCCTGCAGATCAACCTACATCACAGTAAAGCAGCGTCCGCTGCTCTTTTGCTTCGCCTGGCCAAAGGCGAAGCCGACGTGGTCTTAGTTCAGGAACCCTGGGTGGCAGGAGGCAGGGTTTCTGGACTGGGAACAAAAGACTACAAGCTTATGCTTGACC-CCAAACAAGGTAAAATTCGAACCTSizeHit CountTotal NormTotal
No Reads
droBia1
CGAAAG--------------------------AGGCCGATGTGACCGTGGTGGAGGTTGCAGCTGTAGATA---TTAAGACCTCTGCAAATCAACCTACACCCCAGTAAAGCAGCGTTTGATGCACAACTGCTTCGCCTGACCGAAGGCTGGGACAACCTGGTCCAAGAACGTGAACTTCGGGTAGTAGGAGGCAAGGTTGCTGGTCTAGGAACAACAGAATACAAGCTTATGCTTGACC-CCAAAGGAGATAAAATTCGAACCTSizeHit CountTotal NormTotal
No Reads
droTak1
GAGGA--AGTGGAG-----G----CGCCTCGGAGGCCGATGTTACTGTGGTGGAGGTTACAGCTGGGGATGTCGGTAAGACTCCTGCAG-TAAACCTACACCACAGTAAAGCAGCGTCCGCTGCTCTATCGCTTCGCCTGGCCAAGGGCGAAGCCGACGTGGTCCTAGTACAGGAACCTTGGGTAGTAGGAGGCAAGGTTGCTGGACTAGGAACGAGAGAGTATAAGCTAATGCTTGACC-CCAAAGAAGGTAAAATTCGAACCTSizeHit CountTotal NormTotal
No Reads
droYak3
AGGAGG--------------------------GAACCGACACAACCGTGGTGGAGAGGCCCACAGCAGATGTCCGTGAGGCTTCTGCAGATAAACCTCCACCATAGTAAGGCAGCTTCCGCTGCTCTTCAACTCCATCTGGCTGAAGATGGAGTTGACATAGTCCTGATCCAGGAACCTTGGATAGTGGGAGGAAAGGTTTCAGGATTAGGGACTAAGGAATATAAGCTTCTCACAGC-TCCCAGCGAAGGTAAAATAAGGGCCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................TCCATCTGGCTGAAGATGGAGTTG.............................................................................................................2411.00101000000000
.........................................................................................................................................CTGGCTGAAGATGGAGTTGACATAGTC.....................................................................................................2711.00101000000000
..................................................................................................CACCATAGTAAGGCAGCTTCCGC................................................................................................................................................2311.00101000000000
.............................................................................................................................................................CATAGTCCTGATCCAGGAACCTTGGA..................................................................................26200.751506000000009
.............................................................................................................................................................CATAGTCCTGATCCAGGAACCTTG....................................................................................24200.30606000000000
.............................................................................................................................................................CATAGTCCTGATCCAGGAACCT......................................................................................22200.15303000000000
.......................................................................TCCGTGAGGCTTCTGCAGATAAACCTC.......................................................................................................................................................................27150.13202000000000
.......................................................................TCCGTGAGGCTTCTGCAGATAAACCT........................................................................................................................................................................26160.13202000000000
............................................................................................................................TCTTCAACTCCATCTGGCTGAAGATG...................................................................................................................26200.10202000000000
....................................................................................................................................................................................................GGTTTCAGGATTAGGGACTAAGGA.............................................24200.10202000000000
........................................................................................................................................................................TCCAGGAACCTTGGATAGTGGGAGGA.......................................................................26200.10202000000000
.....................................................................TGTCCGTGAGGCTTCTGCAGATAAACC.........................................................................................................................................................................27140.07101000000000
..................................................TGGAGAGGCCCACAGCAGATGTCCGT.............................................................................................................................................................................................26150.07101000000000
.......................................................................TCCGTGAGGCTTCTGCAGATAAACC.........................................................................................................................................................................25160.06100100000000
...........................................................................TGAGGCTTCTGCAGATAAACCTCCACC...................................................................................................................................................................27160.06100100000000
.......................................................................TCCGTGAGGCTTCTGCAGATAAACA.........................................................................................................................................................................25160.06101000000000
...............................................................................................................................TCAACTCCATCTGGCTGAAGATGGAGT...............................................................................................................27160.06100100000000
..................................................TGGAGAGGCCCACAGCAGATGTCCG..............................................................................................................................................................................................25160.06101000000000
...................................................................GATGTCCGTGAGGCTTCTGCAG................................................................................................................................................................................22170.06101000000000
..........................................................CCCACAGCAGATGTCCGTGAGGCTTC.....................................................................................................................................................................................26200.05100100000000
...................................................................................................................................................................................TGGATAGTGGGAGGAAAGGTTTCAG.............................................................25200.05101000000000
.............................................................................................................................................................CATAGTCCTGATCCAGGAACCTTGGAT.................................................................................27200.05101000000000
...............................................................................................................................................................TAGTCCTGATCCAGGAACCTTGGA..................................................................................24200.05101000000000
...................................................................................................................................................................................................AGGTTTCAGGATTAGGGACTAAG...............................................23200.05101000000000
.............................................................................................................................................................CATAGTCCTGATCCAGGAACCTT.....................................................................................23200.05101000000000
....................................................................................................................TCCGCTGCTCTTCAACTCCATCTGGC...........................................................................................................................26200.05101000000000
.......................................................................................................................................................................................................TTCAGGATTAGGGACTAAGGAATATA........................................26200.05101000000000
..............................................................................................................................................................ATAGTCCTGATCCAGGAACCTTGG...................................................................................24200.05101000000000
.............................................................................................................................................................CATAGTCCTGATCCAGGAACCTTGGAA.................................................................................27200.05101000000000
..............................................................................................................................................................ATAGTCCTGATCCAGGAACCT......................................................................................21200.05101000000000
........................................................................................................................................................................................AGTGGGAGGAAAGGTTTCAGGA...........................................................22200.05101000000000
..............................................................................................................................................................................................................TTAGGGACTAAGGAATATAAG......................................21200.05100000010000
............................................................CACAGCAGATGTCCGTGAGGCTTCT....................................................................................................................................................................................25200.05101000000000
...............................................................................................................................................................TAGTCCTGATCCAGGAACCTTGGATAG...............................................................................27200.05101000000000
............................................................................................................................TCTTCAACTCCATCTGGCTGAAG......................................................................................................................23200.05101000000000
.........................................................................................................................................................................CCAGGAACCTTGGATAGTGGGAGGA.......................................................................25200.05101000000000
.............................................................................................................................................................................................GAGGAAAGGTTTCAGGATTAGGGAA...................................................25200.05101000000000
..............................................................................................................................................................ATAGTCCTGATCCAGGAACCTTG....................................................................................23200.05101000000000
......................................................................................................................................................................GATCCAGGAACCTTGGATAGTG.............................................................................22200.05101000000000
............................................................................................................................TCTTCAACTCCATCTGGCTGAAGA.....................................................................................................................24200.05101000000000
.......................................................................................................................GCTGCTCTTCAACTCCATCTGGCTGAAA......................................................................................................................28200.05101000000000
...............................................................................................................................TCAACTCCATCTGGCTGAAGA.....................................................................................................................21200.05101000000000

Generated: 05/18/2015 at 04:53 AM