ID:

dps_2513

 Coordinate:

XL_group1a:4806535-4806685 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.0 -4.5

Flybase annnotation

Antisense to exon [dpse_GLEANR_10919:1]; Antisense to CDS [Dpse\GA10989-cds]; CDS [Dpse\GA10992-cds]; exon [dpse_GLEANR_11413:2]; intron [Dpse\GA10992-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TACCATCATGAGCATCTAAACCTGGAGGTGGACCTCTCCATGAGCAACCTGTGAGTATTTGGGGTTGCGTCGCCGAGTCGCATTTAAATCTTTATTTGTAAGCTTATTGTTCGAATTGGATGTGGGTGGGGTTAACCTAGGATCTATCTAGTGGGGAAGGGATGTAATGTAGTACTAACTATCCGCAGGGTCTCTTGCCGTTTGTGTAATCTGTACTGCTAACTTAAGTATGTGCGTGTCTAGGATCAGCG
*********************************************************************************(((((.((((..(((((..(((.....)))))))).)))).))))).*************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 GSM343916
embryo
..........................................................................................................TTGTTCGATTTGGATATGG.............................................................................................................................. 19 2 6 5.33 32 30 2 0
...............................................................................................................................................................................................................................TTAAATATGTGCGTGTCTAG........ 20 1 1 2.00 2 2 0 0
.................................................................................ATTTAAATCTTTATTTGTAAG..................................................................................................................................................... 21 0 1 1.00 1 1 0 0
............................................................................................................GTTCGAATTGGATGTGGGTG........................................................................................................................... 20 0 1 1.00 1 1 0 0
.......................GGAGGTGGACCTCTCCATGAG............................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0
......CATGAGCATCTAAACCTGGAG................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0
..............................................................................................................TCGAATTGGATGTGGGTGGT......................................................................................................................... 20 1 1 1.00 1 0 1 0
.........................................................................................................ATTGTTCGAATTGGATGTGG.............................................................................................................................. 20 0 1 1.00 1 1 0 0
...............................................................................................................................................................................TAACTATCCGCAGGGTCTCTT....................................................... 21 0 1 1.00 1 1 0 0
..........................GGTGGACCTCTCCATGAGC.............................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0
.........................................................................................................................................TAGGATCTATCTAGTGGGGAA............................................................................................. 21 0 1 1.00 1 1 0 0
..........................................................................................................TTGTTCGAATTGGATGTGGGC............................................................................................................................ 21 1 1 1.00 1 1 0 0
.................................................TGTGAGTATTTGGGGTTGCG...................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0
...........................................................................................................TGTTCGAATTGGATGTGGGTG........................................................................................................................... 21 0 1 1.00 1 1 0 0
..............................................................................................................................................................................CTAACTATCCGCAGGGTCTCT........................................................ 21 0 1 1.00 1 0 1 0
...........................................................................................................................................GGATCTATCTAGTGGGGAAG............................................................................................ 20 0 1 1.00 1 1 0 0
......................................................GTATTTGGGGTTGCGTCGCC................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0
..........................................................................................................................................................................................AGGGTCTCTTGCCGTTTGTGTA........................................... 22 0 1 1.00 1 1 0 0
...........................................................................................................................................................................................................................TAACTTAAGTATGTGCGTGTCT.......... 22 0 1 1.00 1 1 0 0
...........................................................................................................TGTTCGATTTGGATATGG.............................................................................................................................. 18 2 16 0.69 11 11 0 0
.........................................................................................................ATTGTTCGATTTGGATATGG.............................................................................................................................. 20 2 2 0.50 1 1 0 0
.......ATAAGCATCTGAACCTGGCGG............................................................................................................................................................................................................................... 21 3 2 0.50 1 0 1 0
.............................................................................................................................................................AGGGATGTAAAGAAGTACTAAG........................................................................ 22 3 3 0.33 1 0 0 1
...................................................................................................................TTGGATGTGGGTGGGCGT...................................................................................................................... 18 2 20 0.25 5 4 1 0
........TAAGCATCTGAACCTGGCGG............................................................................................................................................................................................................................... 20 3 4 0.25 1 0 1 0
..........................................................................................................TTGTTCGATTTGGATATG............................................................................................................................... 18 2 20 0.20 4 3 1 0
.................................................................................................................................................................................ACTATCCGCAATGGCTCTT....................................................... 19 3 17 0.06 1 1 0 0
........................GAGGAGAACTTCTCCATGAG............................................................................................................................................................................................................... 20 3 18 0.06 1 1 0 0
..........................................................................................................TTGTTCGATTTGGATATGGC............................................................................................................................. 20 3 20 0.05 1 1 0 0
.........................................................................................................TTTGTTCGATTTGGATATGG.............................................................................................................................. 20 3 20 0.05 1 1 0 0

Anti-sense strand reads

-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------######
ATGGTAGTACTCGTAGATTTGGACCTCCACCTGGAGAGGTACTCGTTGGACACTCATAAACCCCAACGCAGCGGCTCAGCGTAAATTTAGAAATAAACATTCGAATAACAAGCTTAACCTACACCCACCCCAATTGGATCCTAGATAGATCACCCCTTCCCTACATTACATCATGATTGATAGGCGTCCCAGAGAACGGCAAACACATTAGACATGACGATTGAATTCATACACGCACAGATCCTAGTCGC
***************************************************************************************************************************(((((.((((..(((((..(((.....)))))))).)))).))))).********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 GSM343916
embryo
 V112
male body		 GSM444067
head
.............................................................................................................................................................................TGATTGATAGGCGTCCCAG........................................................... 19 0 1 4.00 4 2 0 2 0 0
............................................................................................................................................................................ATGATTGATAGGCGTCCCAG........................................................... 20 0 1 3.00 3 1 0 1 1 0
.......................................................................................................................................................................................................................................CACGCACAGATCCTAGTCGC 20 0 1 3.00 3 3 0 0 0 0
...........................................................ACCCCAACGCAGCGGCTCAGCGTAAATT.................................................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0
................................................................................................................................................................................................AGAACGGCAAACACATTAGACATG................................... 24 0 1 2.00 2 2 0 0 0 0
................................................................................................................................................................................................AGAACGGCAAACACATTAGA....................................... 20 0 1 2.00 2 1 1 0 0 0
................................................................................................................................................................................................AGAACGGCAAACACATTAG........................................ 19 0 1 2.00 2 1 1 0 0 0
.................................................................................................................................................................................................................AGACATGACGATTGAATTC....................... 19 0 1 2.00 2 0 1 1 0 0
.........................................................................................................................CACCCACCCCAATTGGATCCTAGATAG....................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
.......................................................................................TAGAAATAAACATTCGAATAACAAGC.......................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................CCCTACATTACATCATGATTG........................................................................ 21 0 1 1.00 1 1 0 0 0 0
............................................................................CAGCGTAAATTTAGAAATAA........................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..............................................................CCAACGCAGCGGCTCAGCGTAAATT.................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................TGATTGATAGGCGTCCAAG........................................................... 19 1 1 1.00 1 0 0 1 0 0
...................................................................GCAGCGGCTCAGCGTAAATTT................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................TCCCAATTGGATCCTAGAT......................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
........................................................AAAACCCCAACGCAGCGGCTCAGCG.......................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
............................................................CCCCAACGCAGCGGCTCAGCG.......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................GGCGTCCCAGAGAACGGCAAACACATT.......................................... 27 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................GGCAAACACATTAGACATGACGA............................... 23 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................TGACGATTGAATTCATACACGCACAG........... 26 0 1 1.00 1 1 0 0 0 0
.......................................................................CGGCTCAGCGTAAATTTAG................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................ATAGATCACCCCTTCCCTACATTACAT................................................................................ 27 0 1 1.00 1 1 0 0 0 0
....................................................................AAGCGGCTCAGCGTAAATTTAG................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................TGATTGATAGGCGTCCCAGAGAACGG.................................................... 26 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................CCCCAATTGGATCCTAGATA........................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................CATTAGACATGACGATTGAATTCA...................... 24 0 1 1.00 1 1 0 0 0 0
............................................................................................................................CCACCCCAATTGGATCCTAGATA........................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
........................................................................GGCTCAGCGTAAATTTAGAAATA............................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................GCGTCCCAGAGAACGGCAAACACAT........................................... 25 0 1 1.00 1 1 0 0 0 0
....................................................................CAGCGGCTCAGCGTAAATTTAGA................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................CGGCAAACACATTAGACATGACGAT.............................. 25 0 1 1.00 1 0 0 1 0 0
............................................................................................................................CCACCCCAATTGGATCCTAGA.......................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................AGAACGGCAAACACATTAGAC...................................... 21 0 1 1.00 1 1 0 0 0 0
..................................................................CGCAGCGGCTCAGCGTAAATTTAGAAA.............................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0
......................................................................................................................................................................................................................TGACGATTGAATTCATAC................... 18 0 1 1.00 1 1 0 0 0 0
..........................................................AACCCCAACGCAGCGGCTCAGCG.......................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................CATACACGCACAGATCCTAG.... 20 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................ATGACGATTGAATTCATACAC................. 21 0 1 1.00 1 1 0 0 0 0
............................................................................................................................CCACCCCAATTGGATCCTAGATATA...................................................................................................... 25 1 1 1.00 1 0 1 0 0 0
..................................................................CGCAGCGGCTCAGCGTAAATTTA.................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0
...................................................................GCAGCGGCTCAGCGTAAATT.................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................GCGTCCCAGAGAACGGCCAACACAT........................................... 25 1 1 1.00 1 0 1 0 0 0
..........................................................................................................................................TCCTAGATAGATCACCCCTT............................................................................................. 20 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................CGTCCCAGAGAACGGCAAACACATGA......................................... 26 1 1 1.00 1 0 1 0 0 0
..........................................................................................AAATAAACATTCGAATAACAAGCTTA....................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................AGACATGACGATTGAGTTCA...................... 20 1 1 1.00 1 0 0 1 0 0
......................................................................................................................................................................................GGCGTCCCAGAGAACGGCAAACACA............................................ 25 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................................................................CATGACGATTGAATTCATA.................... 19 0 1 1.00 1 0 0 1 0 0
..................................................................CGCAGCGGCTCAGCGTAAATT.................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
...................................................................GCAGCGGCTCAGCGTAAAT..................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................ATAGGCGTCCCAGAGAACGG.................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................AACGGCAAACACATTAGACA..................................... 20 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................ACATGACGATTGAATTCATACACGCAC............. 27 0 1 1.00 1 0 0 1 0 0
......................................................................................................................................................................................................................................ACACGCACAGATCCTAGTCGC 21 0 1 1.00 1 1 0 0 0 0
......................................................................................................GAATAACAAGCTTAACCTA.................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................ATAGGCGTCCCAGAGAAC...................................................... 18 0 1 1.00 1 1 0 0 0 0
..................................................................CGCAGCGGCTCAGCGTAAA...................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.............................................................CCCAACGCAGCGGCTCAGCGTA........................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
..................................................................CGCAGCGGCTCAGCGTAAATTTAGAA............................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................CGGCAAACACATTAGACAT.................................... 19 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................CCATGATTGATAGGCGTCCCAG........................................................... 22 1 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................................................CATTAGACATGACGATTGAATTC....................... 23 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................CGATTGATAGGCGTCCCAG........................................................... 19 1 1 1.00 1 0 0 0 1 0
.............................................................................................................................CACCCCAATTGGATCCTAGATAG....................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................AATTCATACACGCACAGATC........ 20 0 1 1.00 1 1 0 0 0 0
.........................................................................................................TAACAAGCTTAACATACACCCACCCCAAT..................................................................................................................... 29 1 1 1.00 1 0 1 0 0 0
....................................................................CAGCGGCTCAGCGTAAATTTA.................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0
................................................................................................................................................................................................AGAACGGCAAACACATTAGACATGA.................................. 25 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................GATTGATAGGCGTCCCAG........................................................... 18 0 1 1.00 1 0 0 1 0 0
................................................................................................................................................................................................AGAACGGCAAACACATTAGACA..................................... 22 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................AACGGCAAACACATTAGACATGA.................................. 23 0 1 1.00 1 0 0 1 0 0
.......TATTCGTAGACTTGGACCGCC............................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 1 0
.........................................................................................................................................................................................GTCCAAGTGAGCGGCAAACACA............................................ 22 3 2 0.50 1 0 0 0 0 1
.................................................................................................................................................................TACATAACCTCATAATTGATA..................................................................... 21 3 6 0.17 1 1 0 0 0 0
..................................................................................................................................................................................GATAGCCGTGCCAGAGAAAG..................................................... 20 3 7 0.14 1 1 0 0 0 0
.........................TCCTCTTGGAGAGGTACT................................................................................................................................................................................................................ 18 2 11 0.09 1 1 0 0 0 0
..........................................................................................................AACAAGCTAAACCTATAC............................................................................................................................... 18 2 20 0.05 1 0 0 0 1 0
......................................................TTAAAACCCCAACGCAGCG.................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0 0 0
.........................................................................................................AAACAAGCTAAACCTATACC.............................................................................................................................. 20 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1a:4806485-4806735 + dps_2513 TACCATCATGAGCATCTAAACCTGGAGGTGGACCTCTCCATGAGCAACCTGTGAGTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGTTGCGTCGCCGAGTCGCATTTAAATCTTTATTTGTAAGCTTATTGTTCGAATTGGATG-TGGGTGGGGTTAACCTAGGATCTATCTAGTGGGGAAGGGATGTAATGTAGTACTAACTATC--------------------------CGCAGGGTCTCTTG----CC---GT---TTGTGTAATCTGTA---CTGCTAACTTAA-GTA---------TGTGCGTGTCTA--------------------------GG----ATCAGCG
droPer2 scaffold_11:1394336-1394586 + TACCATCATGAGCATCTAAACCTGGAGGTGGACCTCTCCATGAGCAACCTGTGAGTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGTTGCGTCGCCGAGTCGCATTTAAATCTTTATTTGTAAGCTTATTGTTCGAATTGGATG-TGGGTGGGGTTAACCTAGGATCTATCTAGTGGGGAAGGGATGTAATGTAGTACTAACTATC--------------------------CGCAGGGTCTCTTG----CC---GT---TTGTGTAATCTGTA---CTGCTAACTTAA-GTA---------TGTGCGTGTCTA--------------------------GG----ATCAGCG
droWil2 scf2_1100000004590:1439537-1439593 - TACCATCATGAGCATTTGAATCTGGAGGTTGACTTATCAATGAGTAATCTGTGAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12970:4191891-4192015 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAA-CGTA--CTTATTGTTCGAATTG-------AAA-------ACTTATGATCTATTAAGCATGGACA-----TAAC-------T----CTTTGCACTCTGCGCTTGCCTAG-----------------------------G---------------------CTGTTAACTTAG-CTAACTAAATGG-----T-TGCTG--------------------------GC---CTTCAGCG
droMoj3 scaffold_6473:7156570-7156626 + TACCATCACGAGCACCTCGACCTGGAAATTGATCTATCAATGAGCAACCTGTGAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:9755770-9755910 - TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-TGTA--CTTATTGTTCGAATTGAAA------A-------ACTTATTGTCTATTAAGCATGTATA-----TTAC-------T----CTTTGCACTGTGCGCTCGCCTAGGTGTGTCTAGGTGCGT-----------------------------------CTTTTAACTTAG-CTAACTAGATGGTTT----GCTTG--------------------------GT---GCCTAGCG
droAna3 scaffold_13117:1872781-1873049 + dan_1308 TACCATCATGAACATCTTGATCTGGAGGTGGATTTGTCCATGAGTAACCTGTGAGTATGGCAAA-------------------CCA----------------------A----AGCTAGCTATAAAG------------------------------------------------------------------------------------------------------------GGA-----GTCCCAT------GAAAAAAAACACACA-A-TCTGTGTA-G-------------GGATCGC-----AATCTTTAT-TGTA--CCTATTGTTCGAACTGGT---TGGAG--------GCTTAAATCTAT--------------------------------------------------------------CGCAGGGTCTTTCGATTGTCTTCGTTGTCGT-------CGTAC-TCTAATAACTTAG-CTAACTA------------GGATATGCGAATGGGTTGGGGCTATCATTTGAG---CTTTAGCG
droBip1 scf7180000396425:189205-189518 - TACCATCATGAACATCTTAATCTGGAGGTGGATTTGTCCATGAGTAACCTGTGAGTATGGCGCA-------------------CCG----------------------A----AGCTGGCTATGAGGGAAGTT-------CTTGT---TTAC-------------CCATAGAGGGCATTCGAGGGAACCATAAT---TCTGTCCGATTT-AAACA---------------------------------------------A--GAAACCAC-T-TCTGTGTA-G-------------GGATCGC-----AATCTTTAT-TGTA--CCTATTGTTCGAAATGGT---TGGAG--------GCTTATATCTAT--------------------------------------------------------------CGCAGGGTCTTTCGATTGTCTTCGTTGTCGT-------CGTAC-TCTAATAACTTAG-CTAACTA------------GGATATGCGAATGGGTTGGGGTTTTCATTTGAG---CTCTAGCG
droKik1 scf7180000302610:1071686-1072000 + TATCATCACGAGCATCTGGATCTGGAGATTGACTTGAGCATGAGCAACCTGTGAGTAGA---AACAGTAGCCTTAAGTATGCATCGTAAGCCATCTTCCCTGATCACCAATCCAGCTGGC-----AGGCAGTC-------CTTGT---GTCCGTTTGTCCCTCTGCCTTGGAAGG------------------------------------------------------------------------------CTCACAAA--AAAACCACAGTTTTGGGCG-G-------------GGATCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAATTGGGTG-GGAAC--------TCTTACATCTAT--------------------------------------------------------------CGTAGGGTCTGTTG----TT---GTCGTTGC-------TGTATATCCACTAACTTAGGCTAATTGGGCAC-----TCG-TC---------------------------GCCA-CTCTAGCG
droFic1 scf7180000454072:1862995-1863240 + TACCATCACGAGCATCTGGACCTGGAGGTGGATCTGTCAATGAGCAACCTGTGAGTAAT--------------------------------------------------------------------------------------CCTTAAC----------------------------------GTACACGTCCGTCTGTCAATTTCCCATCA-------------CTGCTGGGGC-----TTTCCATTC----GCCAC--AAAACCTT-T--ACACTTA-G-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAAAGGGGTG-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGTAGGGTCACTTG----TC---G---------------------TTACTAACTAAC-ATAACTA------------TTCGG--------------------------GGCA-ATTTAGCG
droEle1 scf7180000490996:69018-69128 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGCAGGGTCGATTG----TC---G---------------------CTACTAACTAAG-TTAACTA------------GGCTG--------------------------GGCATTTTCAGCG
droRho1 scf7180000778087:60065-60315 - TACCACCACGAGCACCTGGACCTGGAGGTGGACCTGTCCATGAGCAACCTGTGAGTGCC---------------------------------T--------------------------------------------------GT-----------------------------------------------ATTTGTCTGTCCATTGTAAAACAAACTGATTTTCA-A--TCTGTGCTCGCCTTCCCATCC----TCCAC--AAAACCTT-C--ACTCGTA-G-------------GGGTCGC-----AATGTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGCAGGGTCGTTTG----TC---G---------------------CTACTAACTAAG-CTAACTA------------GACTG--------------------------GGCA-CTTCAACG
droBia1 scf7180000301760:5002254-5002489 - TACCACCACGAGCACCTCGACCTGGAAGTGGACCTGTCCATGAGCAACCTGTGAGTACT--------------------------------------------------------------A----------------------------A------------------------------------CCA-----CATATGGCCAC-------------------------------------ATCCCAT------TCCACTGAATATCTC-C-TGCGTGTATG-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGCAGGGTCACTTG----TC---G---------------------CTACTAACTAGG-TTACTTA-----TGGGC-----------AATGGGCCTTGGCCA---CT-GGGCA-CTTCAGCG
droTak1 scf7180000415289:429603-429700 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTATTGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGCAGGGTCACTTG----TC---G---------------------CTAATAACTAGGGCTAACTT-------------------------------------------AA---CTTCAACG
droEug1 scf7180000408973:115365-115601 + TACCACCATGAGCACCTGGATCTAGAGGTGGACCTGTCTATGAGCAACCTGTGAGTGCC---------------------------------T-----------------------------TAT--------------------TTTTTAT----------------------------------ATACTTATCTGTTTGTTTGTTTTCCGATC------------ATAGTTTGGGT-----TTTCTGTCC----TCAAC--AAAAAGTT-A--TATTGTA---------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAAATCTAT--------------------------------------------------------------CGTAGGGTCACTTG----TC---G---------------------CTATTAACTAGG-GTA----------------------------------------------------CTTTAACG
dm3 chrX:1242042-1242304 - TACCACCATGAGCATCTGGACCTGGAGGTGGACCTCTCCATGAGTAACCTGTAAGTGCT--------------------------------------------------------------ATGTGCTAAGTGCTGTGTGCCTGC---TTAT----------------------------------ACCACCATTCGTCTGTCTGTTGGCAAGCA-------------A--TCTGTGA-----TTCCCGTCC----GCTGA--GACACCTT-T--CCTTGTG-A-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGAAGGGTCACTTG----TC---G---------------------CTACTAACTAAA-TTAACGA------------GGCTG--------------------------GT---CTTCAGCG
droSim2 x:1131339-1131598 - dsi_23211 TACCACCATGAGCATCTGGACCTGGAGGTGGACCTCTCCATGAGCAACCTGTAAGTGCT--------------------------------------------------------------ATGTGCTAAGTG-------CCTGC---TTAT----------------------------------ACCATCATTCGTCTGTCTGTTGGCAAGCA-------------A--TTTGTGA-----TTCGCGTCCGCTCGCTGA--GAAACCTT-T--CCTTGTG-G-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGAAGGGTCACTTG----TC---G---------------------CTACTAACTAGA-TTAACGA------------GCCTG--------------------------GG---CTTCAGCG
droSec2 scaffold_10:1075163-1075422 - TACCACCATGAGCATCTGGACCTGGAGGTGGACCTCTCCATGAGCAACCTGTAAGTGCT--------------------------------------------------------------ATGGGCTAAGTG-------CCTGC---TTAT----------------------------------ACCATTATTCGTCTGTCTGTTGGCAAGCA-------------A--TTTGTGA-----TTCGCGTCCGCTCGCTGA--GAAACCTT-T--CCTTGTG-G-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGAAGGGTCACTTG----TC---G---------------------CTATTAACTAGA-TTAACGA------------GGCTA--------------------------GG---CTTCAGCG
droYak3 X:1159538-1159776 - TACCACCATGAGCATCTGGACCTGGAGGTGGACCTCTCCATGAGCAACCTGTAAGTGCC---------------------------------T--------------------------------------------------GTTGTTAA----------------------------------------CATCCGTCTGTCTGCTGGCAACCA-------------A--TCTGTGA-----TTCCCGTCC----GCTGT--GAAACCTT-T--TCTCGTG-G-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTATAGCTAT--------------------------------------------------------------CGCAGGGTCACTTG----TC---G---------------------CTACTAACTAAA-TATACGA------------GGCTG--------------------------GG---CTTCAGCG
droEre2 scaffold_4644:1234624-1234853 - TACCACCATGAGCATCTGGACCTGGAGGTGGACCTCTCCATGAGTAACCTGTAAGTGCC---------------------------------G--------------------------------------------------TTCTTTAA----------------------------------------CATCCGTCTGTCTGC-------------------------------------TTCCCGTCC----GCTGT--GAAATCTT-TTTTTTTGTG-G-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAAGTCTAT--------------------------------------------------------------CGTAGGGTCACTTG----TC---G---------------------CTGCTAACTAGA-T-ATGTA-----TACACAAGGCGG--------------------------GG---CTTCAGCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TACCATCATGAGCATCTAAACCTGGAGGTGGACCTCTCCATGAGCAACCTGTGAGTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGTTGCGTCGCCGAGTCGCATTTAAATCTTTATTTGTAAGCTTATTGTTCGAATTGGATG-TGGGTGGGGTTAACCTAGGATCTATCTAGTGGGGAAGGGATGTAATGTAGTACTAACTATC--------------------------CGCAGGGTCTCTTG----CC---GT---TTGTGTAATCTGTA---CTGCTAACTTAA-GTA---------TGTGCGTGTCTA--------------------------GG----ATCAGCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................ATTTAAATCTTTATTTGTAAG.....................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................GTTCGAATTGGATG-TGGGTG..........................................................................................................................................................................................................2011.0010100000000
.......................GGAGGTGGACCTCTCCATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......CATGAGCATCTAAACCTGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............................................................................................................................................................................................................................................................................................................................................TCGAATTGGATG-TGGGTGGT........................................................................................................................................................................................................2011.0010000001000
........................................................................................................................................................................................................................................................................................................................................ATTGTTCGAATTGGATG-TGG.............................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TAACTATC--------------------------CGCAGGGTCTCTT............................................................................................................2111.0010100000000
..........................GGTGGACCTCTCCATGAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................TAGGATCTATCTAGTGGGGAA............................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................TTGTTCGAATTGGATG-TGGGC...........................................................................................................................................................................................................2111.0010100000000
.................................................TGTGAGTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGTTGCG......................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................TGTTCGAATTGGATG-TGGGTG..........................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CTAACTATC--------------------------CGCAGGGTCTCT.............................................................................................................2111.0010000001000
...........................................................................................................................................................................................................................................................................................................................................................................GGATCTATCTAGTGGGGAAG...........................................................................................................................................................................2011.0010100000000
......................................................GTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGTTGCGTCGCC.................................................................................................................................................................................................................................................................2011.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTCTCTTG----CC---GT---TTGTGTA......................................................................................2211.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTTAA-GTA---------TGTGCGTGTCT........................................2211.0010100000000
droPer2
TACCATCATGAGCATCTAAACCTGGAGGTGGACCTCTCCATGAGCAACCTGTGAGTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGGTTGCGTCGCCGAGTCGCATTTAAATCTTTATTTGTAAGCTTATTGTTCGAATTGGATG-TGGGTGGGGTTAACCTAGGATCTATCTAGTGGGGAAGGGATGTAATGTAGTACTAACTATC--------------------------CGCAGGGTCTCTTG----CC---GT---TTGTGTAATCTGTA---CTGCTAACTTAA-GTA---------TGTGCGTGTCTA--------------------------GG----ATCAGCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................TGAGCAACCTGTGAGTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG..............................................................................................................................................................................................................................................................................2111.001000001
droWil2
TACCATCATGAGCATTTGAATCTGGAGGTTGACTTATCAATGAGTAATCTGTGAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTAA-CGTA--CTTATTGTTCGAATTG-------AAA-------ACTTATGATCTATTAAGCATGGACA-----TAAC-------T----CTTTGCACTCTGCGCTTGCCTAG-----------------------------G---------------------CTGTTAACTTAG-CTAACTAAATGG-----T-TGCTG--------------------------GC---CTTCAGCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGCACTCTGCGCTTGCCT.................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ATTGTTCGAATTG-------AAA-------ACTTA...............................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
droMoj3
TACCATCACGAGCACCTCGACCTGGAAATTGATCTATCAATGAGCAACCTGTGAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTA-TGTA--CTTATTGTTCGAATTGAAA------A-------ACTTATTGTCTATTAAGCATGTATA-----TTAC-------T----CTTTGCACTGTGCGCTCGCCTAGGTGTGTCTAGGTGCGT-----------------------------------CTTTTAACTTAG-CTAACTAGATGGTTT----GCTTG--------------------------GT---GCCTAGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TACCATCATGAACATCTTGATCTGGAGGTGGATTTGTCCATGAGTAACCTGTGAGTATGGCAAA-------------------CCA----------------------A----AGCTAGCTATAAAG------------------------------------------------------------------------------------------------------------GGA-----GTCCCAT------GAAAAAAAACACACA-A-TCTGTGTA-G-------------GGATCGC-----AATCTTTAT-TGTA--CCTATTGTTCGAACTGGT---TGGAG--------GCTTAAATCTAT--------------------------------------------------------------CGCAGGGTCTTTCGATTGTCTTCGTTGTCGT-------CGTAC-TCTAATAACTTAG-CTAACTA------------GGATATGCGAATGGGTTGGGGCTATCATTTGAG---CTTTAGCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................AATCTAT--------------------------------------------------------------CGCAGGGTCTTTCG...........................................................................................................2111.001100000
..................GATCTGGAGGTGGATTTGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
TACCATCATGAACATCTTAATCTGGAGGTGGATTTGTCCATGAGTAACCTGTGAGTATGGCGCA-------------------CCG----------------------A----AGCTGGCTATGAGGGAAGTT-------CTTGT---TTAC-------------CCATAGAGGGCATTCGAGGGAACCATAAT---TCTGTCCGATTT-AAACA---------------------------------------------A--GAAACCAC-T-TCTGTGTA-G-------------GGATCGC-----AATCTTTAT-TGTA--CCTATTGTTCGAAATGGT---TGGAG--------GCTTATATCTAT--------------------------------------------------------------CGCAGGGTCTTTCGATTGTCTTCGTTGTCGT-------CGTAC-TCTAATAACTTAG-CTAACTA------------GGATATGCGAATGGGTTGGGGTTTTCATTTGAG---CTCTAGCGSizeHit CountTotal NormTotal
No Reads
droKik1
TATCATCACGAGCATCTGGATCTGGAGATTGACTTGAGCATGAGCAACCTGTGAGTAGA---AACAGTAGCCTTAAGTATGCATCGTAAGCCATCTTCCCTGATCACCAATCCAGCTGGC-----AGGCAGTC-------CTTGT---GTCCGTTTGTCCCTCTGCCTTGGAAGG------------------------------------------------------------------------------CTCACAAA--AAAACCACAGTTTTGGGCG-G-------------GGATCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAATTGGGTG-GGAAC--------TCTTACATCTAT--------------------------------------------------------------CGTAGGGTCTGTTG----TT---GTCGTTGC-------TGTATATCCACTAACTTAGGCTAATTGGGCAC-----TCG-TC---------------------------GCCA-CTCTAGCGSizeHit CountTotal NormTotal
No Reads
droFic1
TACCATCACGAGCATCTGGACCTGGAGGTGGATCTGTCAATGAGCAACCTGTGAGTAAT--------------------------------------------------------------------------------------CCTTAAC----------------------------------GTACACGTCCGTCTGTCAATTTCCCATCA-------------CTGCTGGGGC-----TTTCCATTC----GCCAC--AAAACCTT-T--ACACTTA-G-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAAAGGGGTG-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGTAGGGTCACTTG----TC---G---------------------TTACTAACTAAC-ATAACTA------------TTCGG--------------------------GGCA-ATTTAGCGSizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGCAGGGTCGATTG----TC---G---------------------CTACTAACTAAG-TTAACTA------------GGCTG--------------------------GGCATTTTCAGCGSizeHit CountTotal NormTotal
No Reads
droRho1
TACCACCACGAGCACCTGGACCTGGAGGTGGACCTGTCCATGAGCAACCTGTGAGTGCC---------------------------------T--------------------------------------------------GT-----------------------------------------------ATTTGTCTGTCCATTGTAAAACAAACTGATTTTCA-A--TCTGTGCTCGCCTTCCCATCC----TCCAC--AAAACCTT-C--ACTCGTA-G-------------GGGTCGC-----AATGTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGCAGGGTCGTTTG----TC---G---------------------CTACTAACTAAG-CTAACTA------------GACTG--------------------------GGCA-CTTCAACGSizeHit CountTotal NormTotal
No Reads
droBia1
TACCACCACGAGCACCTCGACCTGGAAGTGGACCTGTCCATGAGCAACCTGTGAGTACT--------------------------------------------------------------A----------------------------A------------------------------------CCA-----CATATGGCCAC-------------------------------------ATCCCAT------TCCACTGAATATCTC-C-TGCGTGTATG-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGCAGGGTCACTTG----TC---G---------------------CTACTAACTAGG-TTACTTA-----TGGGC-----------AATGGGCCTTGGCCA---CT-GGGCA-CTTCAGCGSizeHit CountTotal NormTotal
No Reads
droTak1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTATTGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGCAGGGTCACTTG----TC---G---------------------CTAATAACTAGGGCTAACTT-------------------------------------------AA---CTTCAACGSizeHit CountTotal NormTotal
No Reads
droEug1
TACCACCATGAGCACCTGGATCTAGAGGTGGACCTGTCTATGAGCAACCTGTGAGTGCC---------------------------------T-----------------------------TAT--------------------TTTTTAT----------------------------------ATACTTATCTGTTTGTTTGTTTTCCGATC------------ATAGTTTGGGT-----TTTCTGTCC----TCAAC--AAAAAGTT-A--TATTGTA---------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAAATCTAT--------------------------------------------------------------CGTAGGGTCACTTG----TC---G---------------------CTATTAACTAGG-GTA----------------------------------------------------CTTTAACGSizeHit CountTotal NormTotal
No Reads
dm3
TACCACCATGAGCATCTGGACCTGGAGGTGGACCTCTCCATGAGTAACCTGTAAGTGCT--------------------------------------------------------------ATGTGCTAAGTGCTGTGTGCCTGC---TTAT----------------------------------ACCACCATTCGTCTGTCTGTTGGCAAGCA-------------A--TCTGTGA-----TTCCCGTCC----GCTGA--GACACCTT-T--CCTTGTG-A-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGAAGGGTCACTTG----TC---G---------------------CTACTAACTAAA-TTAACGA------------GGCTG--------------------------GT---CTTCAGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................TAT--------------------------------------------------------------CGAAGGGTCACTTG----TC---G---------------------C...........................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCTAT--------------------------------------------------------------CGAAGGGTCACTTG----TC---..................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------C........................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACTAAA-TTAACGA------------GGCTG--------------------------G............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GAGCATCTGGACCTGGAGGTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
.....CCATGAGCATCTGGACCTGGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GAGCATCTGGACCTGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAA-TTAACGA------------GGCTG--------------------------GT---C.......2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCTGGACCTGGAGGTGGACCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.....................................CCATGAGTAACCTGTAAGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ACCACCATGAGCATCTGGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ATGAGCATCTGGACCTGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
............................TGGACCTCTCCATGAGTAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GAGCATCTGGACCTGGAGGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
TACCACCATGAGCATCTGGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TGCTGTGTGCCTGC---TTAT----------------------------------ACC.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................GTCTGTTGGCAAGCA-------------A--TCTGTGA-----TTC....................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................T--------TCTTAGATCTAT--------------------------------------------------------------CGAAGGGT.................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................TGGACCTGGAGGTGGACCTCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................GATCTAT--------------------------------------------------------------CGAAGGGTCACTTG----.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGGAGGTGGACCTCTCCATGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CTT-T--CCTTGTG-A-------------GGGTCGC-----A....................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................T--------------------------------------------------------------ATGTGCTAAGTGCTGTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGGAGGTGGACCTCTCCATGAGTAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTCACTTG----TC---G---------------------CTACTAA.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTAAA-TTAACGA------------GGCTG--------------------------GT---........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TACCACCATGAGCATCTGGACCTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACCATGAGCATCTGGACCTGGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ACCATGAGCATCTGGACCTGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TCTGGACCTGGAGGTGGACCTCTCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TACCACCATGAGCATCTGGACCTGGAGGTGGACCTCTCCATGAGCAACCTGTAAGTGCT--------------------------------------------------------------ATGTGCTAAGTG-------CCTGC---TTAT----------------------------------ACCATCATTCGTCTGTCTGTTGGCAAGCA-------------A--TTTGTGA-----TTCGCGTCCGCTCGCTGA--GAAACCTT-T--CCTTGTG-G-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGAAGGGTCACTTG----TC---G---------------------CTACTAACTAGA-TTAACGA------------GCCTG--------------------------GG---CTTCAGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................TGTTCGAACTGGGTA-TGAAT--------T..................................................................................................................................................................................................2111.00101000000000000000
....ACCATGAGCATCTGGACCTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000000000
..........................................................................................................................................................................................ACCATCATTCGTCTGTCT..............................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
................................................................................................................................................C---TTAT----------------------------------ACCATCATTCGTCTGT................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
......................TGGAGGTGGACCTCTCCATGAGCAACCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000000000000000
.......ATGAGCATCTGGACCTGGAGGTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
..............................................................................................................................................................................................TCATTCGTCTGTCTGTTGGCA.......................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
droSec2
TACCACCATGAGCATCTGGACCTGGAGGTGGACCTCTCCATGAGCAACCTGTAAGTGCT--------------------------------------------------------------ATGGGCTAAGTG-------CCTGC---TTAT----------------------------------ACCATTATTCGTCTGTCTGTTGGCAAGCA-------------A--TTTGTGA-----TTCGCGTCCGCTCGCTGA--GAAACCTT-T--CCTTGTG-G-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAGATCTAT--------------------------------------------------------------CGAAGGGTCACTTG----TC---G---------------------CTATTAACTAGA-TTAACGA------------GGCTA--------------------------GG---CTTCAGCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................T----------------------------------ACCATTATTCGTCTGTCTGT............................................................................................................................................................................................................................................................................................................................................................2111.0011000
....................................................................................................................................................TTAT----------------------------------ACCATTATTCGTCTGT................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...CACCATGAGCATCTGGACCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.......................................................................................................................................................................................................TGTCTGTTGGCAAGCA-------------A--TTTG...............................................................................................................................................................................................................................................................................................................................2111.0010010
.............ATCTGGACCTGGAGGTGGACC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
....................................TCCATGAGCAACCTGTAAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..................................................GTAAGTGCT--------------------------------------------------------------ATGGGCTAAGTG-------..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
..............................................................................................................................................TGC---TTAT----------------------------------ACCATTATTCGTCT..................................................................................................................................................................................................................................................................................................................................................................2111.0011000
droYak3
TACCACCATGAGCATCTGGACCTGGAGGTGGACCTCTCCATGAGCAACCTGTAAGTGCC---------------------------------T--------------------------------------------------GTTGTTAA----------------------------------------CATCCGTCTGTCTGCTGGCAACCA-------------A--TCTGTGA-----TTCCCGTCC----GCTGT--GAAACCTT-T--TCTCGTG-G-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTATAGCTAT--------------------------------------------------------------CGCAGGGTCACTTG----TC---G---------------------CTACTAACTAAA-TATACGA------------GGCTG--------------------------GG---CTTCAGCGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
TACCACCATGAGCATCTGGACCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
........................................................................................................................................................................................................................................................................................................................................................................CTTATAGCTAT--------------------------------------------------------------CGCAGGGTCACTTG----TC---..................................................................................................2711.00100000010000
......................TGGAGGTGGACCTCTCCATGAGCAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TATACGA------------GGCTG--------------------------GG---CTTCAGC.2211.00101000000000
.......ATGAGCATCTGGACCTGGAGGTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..CCACCATGAGCATCTGGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
droEre2
TACCACCATGAGCATCTGGACCTGGAGGTGGACCTCTCCATGAGTAACCTGTAAGTGCC---------------------------------G--------------------------------------------------TTCTTTAA----------------------------------------CATCCGTCTGTCTGC-------------------------------------TTCCCGTCC----GCTGT--GAAATCTT-TTTTTTTGTG-G-------------GGGTCGC-----AATCTTTAT-TGTA--CTTATTGTTCGAACTGGGTA-TGAAT--------TCTTAAGTCTAT--------------------------------------------------------------CGTAGGGTCACTTG----TC---G---------------------CTGCTAACTAGA-T-ATGTA-----TACACAAGGCGG--------------------------GG---CTTCAGCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............ATCTGGACCTGGAGGTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000

Generated: 05/18/2015 at 04:47 AM