ID:

dps_2467

 Coordinate:

XL_group1a:2393283-2393433 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.3 -13.2 -13.1

Flybase annnotation

CDS [Dpse\GA22925-cds]; exon [dpse_GLEANR_11292:2]; intron [Dpse\GA22925-in]

Repeatable elements

NameClassFamilyStrand
Transib3_DPDNACMC-Transib+
mature
  1. dps_2467  XL_group1a:2393356-2393380 +
  2. XL_group1a:2399039-2399063 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGCGCAGGATGCCGACTCCCTGATTAGTAGTCTGGAAAATGAGCTAGGCGGTAAAACTGTACAAAAAATCCACAAATAGTTATTCTTTAAAGACATTAAATTTGTTGGATAATACTTCCAATGTGGATGACTATTTTACAAAAATTACTTTGGCTCCTGCCACCAAAAGTTTAGCAGGCTGGATCAGCTAAAAATTAACTTCGGCTTATTCAACATTAGCTTAACCGTAACCAACCACCATCCTGCTCTTT
***************************************************......................((((((((((((..................((((((.......))))))..))))))))))))............******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 M059
embryo
 SRR902012
CNS imaginal disc
 GSM343916
embryo
 M022
male body
....................TGATTAGTAGTCTGGAAAATGAGC............................................................................................................................................................................................................... 24 0 1 11.00 11 1 8 2 0 0 0 0
................................TGGAAAATGAGCTAGGCGGTAAAAC.................................................................................................................................................................................................. 25 0 4 3.25 13 1 11 1 0 0 0 0
..........................GTAGTCTGGAAAATGAGCTAGGC.......................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0
.............................GTCTGGAAAATGAGCTAGGCGG........................................................................................................................................................................................................ 22 0 4 2.00 8 1 6 1 0 0 0 0
...................CTGATTAGTAGTCTGGAAAATGAGC............................................................................................................................................................................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0
..............................TCTGGAAAATGAGCTAGGCGG........................................................................................................................................................................................................ 21 0 4 2.00 8 0 8 0 0 0 0 0
..........................GTAGTCTGGAAAATGAGCTAGG........................................................................................................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0 0
........................TAGTAGTCTGGAAAATGAGCTAGGCGG........................................................................................................................................................................................................ 27 0 1 2.00 2 0 2 0 0 0 0 0
..............................TCTGGAAAATGAGCTAGGCGGTAAAA................................................................................................................................................................................................... 26 0 4 1.75 7 0 1 6 0 0 0 0
......................................................................................................................................................................................................CTTCGGCTTATTCAACATTAGCT.............................. 23 0 2 1.50 3 3 0 0 0 0 0 0
...........................................................................................................................TGGATGACTATTTTACAAAAATTAC....................................................................................................... 25 0 2 1.50 3 0 3 0 0 0 0 0
.........................................................................................................TGGATAATACTTCCAATGTGGATGAC........................................................................................................................ 26 0 2 1.50 3 0 3 0 0 0 0 0
................................................................................................................................................................................................................................CCGTAACCAACCACCATCCTGCTCTT. 26 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................TACAAAAATTACTTTGGCTCCTGCC.......................................................................................... 25 0 2 1.00 2 2 0 0 0 0 0 0
.......................TTAGTAGTCTGGAAAATGAGCTAGGC.......................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0
...................................................TAAAACTGTACAAAAAATCCACAAATAGT........................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................TTAACCGTAACCAACCACCATC......... 22 0 2 1.00 2 2 0 0 0 0 0 0
................................................................................................................................................................................................................................CCGTAACCAACCACCATCCTGCTCT.. 25 0 2 1.00 2 2 0 0 0 0 0 0
.......................TTAGTAGTCTGGAAAATGAGC............................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
........................TAGTAGTCTGGAAAATGAGCTAGGC.......................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
................TCCCTGATTAGTAGTCTGGAAAATGAG................................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0 0
....................TGATTAGTAGTCTGGAAAATGAG................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0
........................TAGTAGTCTGGAAAATGAGC............................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0
...................CTGATTAGTAGTCTGGAAAATTAGC............................................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................CGTAACCAACCACCATCCTGCTCTTT 26 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................CGTAACCAACCACCATCCTGCTCTT. 25 0 1 1.00 1 1 0 0 0 0 0 0
......................................................AACTGTACAAAAAATCCACAAATAG............................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................TTTGTTGGATAATACTTCCAATGTGGATG.......................................................................................................................... 29 0 2 1.00 2 0 0 2 0 0 0 0
........................TAGTAGTCTGGAAAATGAGCTAGG........................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
................................TGGAAAATGAGCTAGGCGGTAAAA................................................................................................................................................................................................... 24 0 4 0.75 3 0 3 0 0 0 0 0
................................TGGAAAATGAGCTAGGCGGTAAA.................................................................................................................................................................................................... 23 0 4 0.75 3 0 3 0 0 0 0 0
..............................TCTGGAAAATGAGCTAGGCGGTAA..................................................................................................................................................................................................... 24 0 4 0.75 3 0 3 0 0 0 0 0
.............................GTCTGGAAAATGAGCTAGGCG......................................................................................................................................................................................................... 21 0 4 0.75 3 3 0 0 0 0 0 0
................................TGGAAAATGAGCTAGGCGGTAAAACTG................................................................................................................................................................................................ 27 0 4 0.50 2 0 2 0 0 0 0 0
............................................................................................................................................................................................................................TTAACCGTAACCAACCACCATCCTGC..... 26 0 2 0.50 1 1 0 0 0 0 0 0
...........................................................................................................................TGGATGACTATTTTACAAAAATTA........................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0
.........................................................................................................................................ACAAAAATTACTTTGGCTCCTGCC.......................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................CTTCGGCTTATTCAACATTAG................................ 21 0 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................TAACCGTAACCAACCACCATCCTGCTC... 27 0 2 0.50 1 1 0 0 0 0 0 0
.............................GTCTGGAAAATGAGCTAGGC.......................................................................................................................................................................................................... 20 0 4 0.50 2 1 0 0 0 0 1 0
........................................................................................................................................TACAAAAATTACTTTGGCTCCTGCCA......................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
.............................GTCTGGAAAATGAGCTAGGCGGT....................................................................................................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0 0 0
............................................................................................................................................................................................................................TTAACCGTAACCAACCACCATCC........ 23 0 2 0.50 1 1 0 0 0 0 0 0
............................................................................................................................................................................................TAAAAATTAACTTCGGCTTATTCAACAT................................... 28 0 2 0.50 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................TTAACCGTAACCAACCACCATCCTG...... 25 0 2 0.50 1 1 0 0 0 0 0 0
..............................TCTGGAAAATGAGCTAGGCGGTA...................................................................................................................................................................................................... 23 0 4 0.50 2 0 2 0 0 0 0 0
................................................................................................................................................................................................................................CCGTAACCAACCACCATCCTGC..... 22 0 2 0.50 1 1 0 0 0 0 0 0
................................................................................................................TACTTCCAATGTGGATGACTAT..................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0
...................................................................................................................................................................CAAAAGTTTAGCAGGCTGGATCAGC............................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................CTTCGGCTTATTCAACATTAGCTTAA........................... 26 0 2 0.50 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................TTATTCAACATTAGCTTAACCGT....................... 23 0 2 0.50 1 1 0 0 0 0 0 0
................................................................................................................................GACTATTTTACAAAAATTACTTTG................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
.............................GTCTGGAAAATGAGCTAGGCGGTA...................................................................................................................................................................................................... 24 0 4 0.50 2 0 2 0 0 0 0 0
........................................................................................................TTGGATAATACTTCCAATGTGGATGAC........................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................CTTAACCGTAACCAACCACCATC......... 23 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................................................................................CCACCAAAAGTTTAGCAGGCTGGA.................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
................................................................................................................................GACTATTTTACAAAAATTACTTTGGC................................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TAGCTTAACCGTAACCAACCACCATCC........ 27 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................................................................AAGTTTAGCAGGCTGGATCAGCTAA............................................................ 25 0 2 0.50 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................AATTAACGTTAGCTTAACCGT....................... 21 3 3 0.33 1 0 0 0 1 0 0 0
...................CTGAATTGTAGTCTGGAGAA.................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 1 0 0
..............................TCTGGAAAATGAGCTAGGCGGTAAAAC.................................................................................................................................................................................................. 27 0 4 0.25 1 0 1 0 0 0 0 0
....................................AAATGAGCTAGGCGGTAAAACTG................................................................................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................CTAAAATTTAACTCCGGC.............................................. 18 2 5 0.20 1 0 0 0 0 0 0 1

Anti-sense strand reads

TCGCGTCCTACGGCTGAGGGACTAATCATCAGACCTTTTACTCGATCCGCCATTTTGACATGTTTTTTAGGTGTTTATCAATAAGAAATTTCTGTAATTTAAACAACCTATTATGAAGGTTACACCTACTGATAAAATGTTTTTAATGAAACCGAGGACGGTGGTTTTCAAATCGTCCGACCTAGTCGATTTTTAATTGAAGCCGAATAAGTTGTAATCGAATTGGCATTGGTTGGTGGTAGGACGAGAAA
*******************************************************************************************************......................((((((((((((..................((((((.......))))))..))))))))))))............*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 V112
male body		 SRR902011
testis
 GSM343916
embryo
......CCTACGGCTGAGGGACTAATCAT.............................................................................................................................................................................................................................. 23 0 1 8.00 8 1 7 0 0 0 0
.................................................................TTTAGGTGTTTATCAATAAGAAAT.................................................................................................................................................................. 24 0 2 7.00 14 10 3 0 0 0 1
.....................................TTACTCGATCCGCCATTTTGACATGT............................................................................................................................................................................................ 26 0 1 7.00 7 6 0 1 0 0 0
...............................................................TTTTTAGGTGTTTATCAATAAGAAAT.................................................................................................................................................................. 26 0 2 4.00 8 6 2 0 0 0 0
...........GGCTGAGGGACTAATCATCAGACCT....................................................................................................................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0
......................................................................................................................................................................TTCAAATCGTCCGACCTAGTCGATT............................................................ 25 0 2 3.00 6 6 0 0 0 0 0
.............................................................................................................................................................................CGTCCGACCTAGTCGATTTTTAAT...................................................... 24 0 2 3.00 6 6 0 0 0 0 0
.........ACGGCTGAGGGACTAATCATCAGACCT....................................................................................................................................................................................................................... 27 0 1 3.00 3 0 3 0 0 0 0
.............................................................................................................ATTATGAAGGTTACACCTACTGAT...................................................................................................................... 24 0 2 2.50 5 0 5 0 0 0 0
................................................................TTTTAGGTGTTTATCAATAAGAAAT.................................................................................................................................................................. 25 0 2 2.50 5 5 0 0 0 0 0
..................................................................................................................GAAGGTTACACCTACTGATAAAAT................................................................................................................. 24 0 2 2.50 5 4 0 0 1 0 0
..........................................................................................................................................................................................................CCGAATAAGTTGTAATCGAATTGGCAT...................... 27 0 2 2.50 5 4 0 1 0 0 0
...............................................................................................................TATGAAGGTTACACCTACTGATAAA................................................................................................................... 25 0 2 2.50 5 4 0 1 0 0 0
..........................................CGATCCGCCATTTTGACATGTTTT......................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0
............................................................................................................TATTATGAAGGTTACACCTACTGAT...................................................................................................................... 25 0 2 2.00 4 0 4 0 0 0 0
................................................................................................................................................................................................................AAGTTGTAATCGAATTGGCATTGGTT................. 26 0 2 2.00 4 0 3 0 1 0 0
..............TGAGGGACTAATCATCAGACCTTTT.................................................................................................................................................................................................................... 25 0 1 2.00 2 1 0 1 0 0 0
....................................TTTACTCGATCCGCCATTTTGACATGT............................................................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0
................AGGGACTAATCATCAGACCTTTT.................................................................................................................................................................................................................... 23 0 1 2.00 2 0 2 0 0 0 0
.............CTGAGGGACTAATCATCAGACCTTTT.................................................................................................................................................................................................................... 26 0 1 2.00 2 1 0 1 0 0 0
......CCTACGGCTGAGGGACTAAT................................................................................................................................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0 0
.............CTGAGGGACTAATCATCAGACCTT...................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0
.......................................ACTCGATCCGCCATTTTGACATGT............................................................................................................................................................................................ 24 0 1 2.00 2 2 0 0 0 0 0
..............................................................................................................................................................................................TTTTAATTGAAGCCGAATAAGTT...................................... 23 0 2 2.00 4 4 0 0 0 0 0
..............................................................................................................TTATGAAGGTTACACCTACTGAT...................................................................................................................... 23 0 2 1.50 3 3 0 0 0 0 0
..........................................................................................................................................................................................................CCGAATAAGTTGTAATCGAATTGGCATT..................... 28 0 2 1.50 3 0 0 1 2 0 0
...............................................................................................................TATGAAGGTTACACCTACTGATAAAAT................................................................................................................. 27 0 2 1.50 3 1 0 2 0 0 0
..................................................................................................................................................................GGTTTTCAAATCGTCCGACCTAGT................................................................. 24 0 2 1.50 3 0 3 0 0 0 0
.....................................................................................................................................................................................................................GTAATCGAATTGGCATTGGTTGGTGGT........... 27 0 2 1.50 3 3 0 0 0 0 0
.............................................................................................................................................................................................................AATAAGTTGTAATCGAATTGGCATT..................... 25 0 2 1.50 3 1 0 0 2 0 0
..............................................................................................................................................................................................................ATAAGTTGTAATCGAATTGGCATTGGTT................. 28 0 2 1.50 3 2 0 0 1 0 0
......................................TACTCGATCCGCCATTTTGACATGTTTT......................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................................................TGTAATCGAATTGGCATTGGTT................. 22 0 2 1.00 2 2 0 0 0 0 0
..........................................................................................................................................................................................................CCGAATAAGTTGTAATCGAATTGGCA....................... 26 0 2 1.00 2 2 0 0 0 0 0
............................TGAGACCTTTTACTCGATCCGCCATT..................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................AGTTGTAATCGAATTGGCATTGGTT................. 25 0 2 1.00 2 2 0 0 0 0 0
................................................................TTTTAGGTGTTTATCAATAAA...................................................................................................................................................................... 21 1 2 1.00 2 0 2 0 0 0 0
.................................................................................................................TGAAGGTTACACCTACTGATAAA................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0 0
................AGGGACTAATCATCAGACCTTTTACT................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
.......CTACGGCTGAGGGACTAAT................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
...........GGCTGAGGGACTAATCATCAGACCTT...................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0
.................GGGACTAATCATCAGACCTTTTACT................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
.................................................................TTTAGGTGTTTATCAATAAGAAA................................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0 0
........TACGGCTGAGGGACTAATCAT.............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 1 0
....................................TTTACTCGATCCGCCATTTTGACATG............................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................GGTTGGTGGTAGGACGAGAAA 21 0 1 1.00 1 0 1 0 0 0 0
....................................TTTACTCGATCCGCCATTTTGACAT.............................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................TCCGACCTAGTCGATTTTTAAT...................................................... 22 0 2 1.00 2 2 0 0 0 0 0
...................................................................................................................................................GAAACCGAGGACGGTGGTTTTCAAAT.............................................................................. 26 0 2 1.00 2 2 0 0 0 0 0
......CCTACGGCTGAGGGACTAATCATCAGAC......................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..........................................CGATCCGCCATTTTGACAT.............................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................GTCCGACCTAGTCGATTTTTAAT...................................................... 23 0 2 1.00 2 2 0 0 0 0 0
......................................TACTCGATCCGCCATTTTGACATGT............................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................CGTCCGACCTAGTCGATTTTTAA....................................................... 23 0 2 1.00 2 2 0 0 0 0 0
.........................................TCGATCCGCCATTTTGACATGT............................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................TTTAATTGAAGCCGAATAAGTTGT.................................... 24 0 2 1.00 2 2 0 0 0 0 0
.....................................................TTTGACATGTTTTTTAGGTGT................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
.......CTACGGCTGAGGGACTAATCAT.............................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................TGGTTGGTGGTAGGACGAGAAA 22 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................TTTTAATTGAAGCCGAATAAGTTGT.................................... 25 0 2 1.00 2 2 0 0 0 0 0
............................TGAGACCTTTTACTCGATCCGCCAT...................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
............GCTGAGGGACTAATCATCAGACCTTTT.................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
.......................................................TGACATGTTTTTTAGGTGTTTATCAAT......................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0
..............TGAGGGACTAATCATCAGACCTT...................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
....GTCCTACGGCTGAGGGACTAA.................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................CGATTTTTAATTGAAGCCGAATAAGTT...................................... 27 0 2 1.00 2 2 0 0 0 0 0
................................................................................................................ATGAAGGTTACACCTACTGATAAA................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0 0
......................................................................................................................................................................TTCAAATCGTCCGACCTAGTCGAT............................................................. 24 0 2 1.00 2 2 0 0 0 0 0
..........................................CGATCCGCCATTTTGACATGTTTTTT....................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................TAAGTTGTAATCGAATTGGCATTGGTT................. 27 0 2 1.00 2 2 0 0 0 0 0
..........CGGCTGAGGGACTAATCAT.............................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................CGATTTTTAATTGAAGCCGAATAAGT....................................... 26 0 2 1.00 2 1 0 1 0 0 0
....................................................................................................................................................AAACCGAGGACGGTGGTTTTCAAATCGT........................................................................... 28 0 2 1.00 2 2 0 0 0 0 0
.....................................................................................................................................................................................CTAGTCGATTTTTAATTGAAGCCGAAT........................................... 27 0 2 0.50 1 1 0 0 0 0 0
......................................................................................................................................................................TTCAAATCGTCCGACCTAGTCGATTT........................................................... 26 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GTAATCGAATTGGCATTGGTTGGTGGTT.......... 28 1 2 0.50 1 1 0 0 0 0 0
..............................................................TTTTTTAGGTGTTTATCAATAAGAA.................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................TTGGCATTGGTTGGTGGT........... 18 0 2 0.50 1 1 0 0 0 0 0
.....................................................................GGTGTTTATCAATAAGAAAT.................................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................................ATAAGTTGTAATCGAATTGGCATTG.................... 25 0 2 0.50 1 1 0 0 0 0 0
.......................................................................................................................................................................ACAAATCGTCCGACCTAGTCGATT............................................................ 24 1 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................................................................TTTCAAATCGTCCGACCTAGT................................................................. 21 0 2 0.50 1 1 0 0 0 0 0
......................................................................................................................................................................TTCAAATCGTCCGACCTAGTCGATTTTT......................................................... 28 0 2 0.50 1 1 0 0 0 0 0
...............................................................................................................TATGAAGGTTACACCTACTGATAA.................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................CGGTGGTTTTCAAATCGTCCGAC...................................................................... 23 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GTAATCGAATTGGCATTGGTTGGT.............. 24 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................................CCGAATAAGTTGTAATCGAATTGG......................... 24 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................................ATAAGTTGTAATCGAATTGGCATT..................... 24 0 2 0.50 1 1 0 0 0 0 0
.............................................................................................................ATTATGAAGGTTACACCTACTGA....................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................................................................CGAGGACGGTGGTTTTCAAATCGTGCA........................................................................ 27 2 2 0.50 1 1 0 0 0 0 0
.............................................................................................................................................................ACGGTGGTTTTCAAATCGTCCGACC..................................................................... 25 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................CGAATTGGCATTGGTTGGTGGT........... 22 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................................................AACCGAGGACGGTGGTTTTCAAATCGT........................................................................... 27 0 2 0.50 1 1 0 0 0 0 0
.............................GAGACCTTTTACTCGATCCGCCAT...................................................................................................................................................................................................... 24 1 4 0.50 2 2 0 0 0 0 0
................................................................................................................ATGAAGGTTACACCTACTGAT...................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0
........................................................................GTTTATCAATAAGAAATTTCTGTAA.......................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................GTAATCGAATTGGCATTGGTT................. 21 0 2 0.50 1 0 1 0 0 0 0
..................................................................TTAGGTGTTTATCAATAAGAAAT.................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0
...................................................................................................................................................................................................................TTGTAATCGAATTGGCATTGGTT................. 23 0 2 0.50 1 1 0 0 0 0 0
.........................................................................................................ACCTATTATGAAGGTTACACCTACTGAT...................................................................................................................... 28 0 2 0.50 1 1 0 0 0 0 0
...............................................................................................................................................................................................................TAAGTTGTAATCGAATTGGCATT..................... 23 0 2 0.50 1 1 0 0 0 0 0
................................................................CTTTAGGTGTTTATCAATAAGAAAT.................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0 0
........................................................................................................AACCTATTATGAAGGTTACACCTACTGAT...................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0 0
...........................................................................................................................................................................................GATTTTTAATTGAAGCCGAATAAGT....................................... 25 0 2 0.50 1 1 0 0 0 0 0
............................................................................................................................................................................................................GAATAAGTTGTAATCGAATTGGCATT..................... 26 0 2 0.50 1 0 0 0 1 0 0
........................................................................................................................................................CGAGGACGGTGGTTTTCAAATCGT........................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................................................TGTAATCGAATTGGCATTGGT.................. 21 0 2 0.50 1 1 0 0 0 0 0
...................................................................TAGGTGTTTATCAATAAGAAAT.................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0 0 0
TCGCGTCCTACGGCTGAGGGACT.................................................................................................................................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0 0
...........................................................................................................CTATTATGAAGGTTACACCTACTGAT...................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
................................................................................................................................................................................................................AAGTTGTAATCGAATTGGCATT..................... 22 0 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................................................GAGGACGGTGGTTTTCAAATCGT........................................................................... 23 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................................................................TTTCAAATCGTCCGACCTAGTCGATT............................................................ 26 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................................................................................CAAATCGTCCGACCTAGTCGATT............................................................ 23 0 2 0.50 1 1 0 0 0 0 0
......................................................................................................................GTTACACCTACTGATAAAATGTTTTT........................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0
.............................................................................................................AATATGAAGGTTACACCTACTGATAAAAT................................................................................................................. 29 1 2 0.50 1 0 1 0 0 0 0
....................................................................AGGTGTTTATCAATAAGAAAT.................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................................................................................................................................AGTTGTAATCGAATTGGCATTGGT.................. 24 0 2 0.50 1 1 0 0 0 0 0
................................................................TTTTAGGTGTTTATCAATAAGAAA................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
.............................CAGACCTTTTACTCGATCCGCCAT...................................................................................................................................................................................................... 24 0 4 0.50 2 2 0 0 0 0 0
...................................................................TAGGTGTTTATCAATAAGAAATTTCTG............................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0 0
.................................................................................................................TGAAGGTTACACCTACTGA....................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0 0
...........................................................................................................................................................GGACGGTGGTTTTCAAATCGT........................................................................... 21 0 2 0.50 1 1 0 0 0 0 0
...............................................................................................................................................................................................................TAAGTTGTAATCGAATTGGCATTGGT.................. 26 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................TTGGTTGGTGGTAGGACGAGA.. 21 0 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................................................................................TCGATTTTTAATTGAAGCCGAAT........................................... 23 0 2 0.50 1 1 0 0 0 0 0
...................................................................................................................................................GAAACCGAGGACGGTGGTTTTCAAATCG............................................................................ 28 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................CGATTTTTAATTGAAGCCGAATA.......................................... 23 0 2 0.50 1 1 0 0 0 0 0
...........................................................................................................................................................................ATCGTCCGACCTAGTCGATT............................................................ 20 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................GAAGGTTACACCTACTGATAAAA.................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0
.....................................TTACTCGATCCGCCATTTTGAC................................................................................................................................................................................................ 22 0 4 0.25 1 1 0 0 0 0 0
.............................GAGACCTTTTACTCGATCCGCCATT..................................................................................................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................................................................................GTATCGAATTGGCATTTGTTG................ 21 3 4 0.25 1 1 0 0 0 0 0
....................................TTTACTCGATCCGCCATTTTGAC................................................................................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................ATTGGCATGGGTTGATGGTT.......... 20 3 8 0.13 1 1 0 0 0 0 0
...........................................................................................................................................TTTTTACGCAAACCGAGGA............................................................................................. 19 3 20 0.05 1 0 0 0 0 0 1
.............................................................................................................................................................................................................................AATGGCATGGGTTGATGGT........... 19 3 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................ATAGGACGGTGGTTTTGAA................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................................AAAGTGAGGACGGCGGTTTT................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 XL_group1a:2393233-2393483 + dps_2467 AGCGCAGGATGCCGACTCCCTGATTAGTAGTCTGGAAAATGAGCTAGGCGGTAAAACTGTACAAAAAATCCACAAATAGTTATTCTTTAAAGACATTAAATTTGTTGGATAATACTTCCAATGTGGATGACTATTTTACAAAAATTACTTTGGCTCCTGCCACCAAAAGTTTAGCAGGCTGGATCAGCTAAA---AATTA----ACTTCGGCT------------------TATTCAACATTAGCTTAACCGTAACCAACCACCATCCTGCTCTTT
droPer2 scaffold_28:820235-820428 - TG---------------------------------------------------------TACAAAAAATCCACAAATAGTTATTCTTTAAAGACATTTAATTTGTTGGATAATACTTGAAATGTGGATGACTATTTTACAAAAATTACTTTGGCTCCTGCCACCAAAAGTTTAGCAGGCTGGATCAGTTAAA---AATTA----ACTTCGGCT------------------TATTCAACATTAGCTTAACCGTAACCAACCACCATCCTGCTCTTT
droAna3 scaffold_13280:1239755-1239903 - AA------------------------------------------------------------------------------------------------------------T--AGCC------------ACCATATT--AGCGACCATTTTAGAACAACTCACCAAAACTGTAATAGACTCGACCAAACTAA---AATTACCCGACTACGTCTAGCACACACCAGACTCACCCACCAACACTATCTGAACCAAATTCCAACACCACCTTGCCCTTT
droKik1 scf7180000298110:18078-18212 + CG------------------------------------------------------------------------------------------------------------------------------------------ACAACTACTACAGATCCTTCCATCCCAAATCAAGCAGACTCGATCAAACTAA---AATAATACGCCTTAGACTAGGCCACACAAAACTTACACACGAGCACTACTTCAACCAAAACCAACCTCCACCCTGCCCTTT
droFic1 scf7180000451601:4609-4762 + CC---------------------------------------------------------------------------------------------------------------------AACATGCGTAACCACATT--AGCGATTTCTTTAGAAATACCCACCAAAAGTGGACCAGACTCGATCAAACCAA---AATTACCCGACTACGTCTAGGACATACAAACCTGACCCACCAACACTATCTGAATCAAAATCCAAAACCACCTTGCCCCAA
droBia1 scf7180000302136:3344385-3344428 - GC-TCACGATGCTGATTCCCTGATTTCAAGTGTGC-----------------------------------------------------------------------------------------------------------------------------------------AGAA----------------------------------------------------------------------------------------------GGAGTT
droEug1 scf7180000409809:21581-21694 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------CCACCAAAACTGGACCAGACTTGACCAAATAAA---AATAATACGACATCGACTAGAACACACAAAAATAACTCACCATCACTATTTAGATAGAAATTCAACACCAATTTGACCGTT
dm3 chr2RHet:1945837-1945988 + AC---------------------------------------------------------------------------------------------------------GAAT--ACCT------------TACACACG--TGCGATTACCTCAAACAATCCCACCCATACTGGACCAGACTCGACCAAATAAA---AATAATACGACTTCGACTAGGACACACAAACATAACCCACTAACTTTACCTAAATTCAAATTCAATACCAACTTGTCCGTT
droSec2 scaffold_4510:943-1072 + -----------------------------------------------------------------------------------------------------------------------------------------------ATTACCTTAAACAATCTCACCCAAATTGGACCAGACTCGACCAAATAAA---AATAATACGACTTCGACTAGGACACACAAACATAACCCACCAACACTACCTAAATCCCAATTCAATACCAACTTGTCCGTT
droYak3 v2_chr3h_random_002:520519-520746 + TC------------------------------TGGAAGGTGAACT-GGCGACAAAACAAAAAGAAAATATTATAAACTGTAG-TCTATGGTACCAATTAATTAATTCGAAT--AACT------------CACACACC--TGCGATTACCTTAAGCAATCCCACTAAAATTTGACCAGACTTGACCAAATAAACATAATAATACGACTTCGACTAGGACACACAAATATAACCCACCAACTCTACCTAAATCAAAGTTCAATACCAATTGGTTCATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGCGCAGGATGCCGACTCCCTGATTAGTAGTCTGGAAAATGAGCTAGGCGGTAAAACTGTACAAAAAATCCACAAATAGTTATTCTTTAAAGACATTAAATTTGTTGGATAATACTTCCAATGTGGATGACTATTTTACAAAAATTACTTTGGCTCCTGCCACCAAAAGTTTAGCAGGCTGGATCAGCTAAA---AATTA----ACTTCGGCT------------------TATTCAACATTAGCTTAACCGTAACCAACCACCATCCTGCTCTTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................TGATTAGTAGTCTGGAAAATGAGC........................................................................................................................................................................................................................................24111.00110100000820
................................TGGAAAATGAGCTAGGCGGTAAAAC...........................................................................................................................................................................................................................2543.251301000001110
..........................GTAGTCTGGAAAATGAGCTAGGC...................................................................................................................................................................................................................................2312.0020200000000
.............................GTCTGGAAAATGAGCTAGGCGG.................................................................................................................................................................................................................................2242.0080100000610
...................CTGATTAGTAGTCTGGAAAATGAGC........................................................................................................................................................................................................................................2512.0020000000200
..............................TCTGGAAAATGAGCTAGGCGG.................................................................................................................................................................................................................................2142.0080000000800
..........................GTAGTCTGGAAAATGAGCTAGG....................................................................................................................................................................................................................................2212.0020200000000
........................TAGTAGTCTGGAAAATGAGCTAGGCGG.................................................................................................................................................................................................................................2712.0020000000200
..............................TCTGGAAAATGAGCTAGGCGGTAAAA............................................................................................................................................................................................................................2641.7570000000160
.............................................................................................................................................................................................................CTTCGGCT------------------TATTCAACATTAGCT..............................2321.5030300000000
...........................................................................................................................TGGATGACTATTTTACAAAAATTAC................................................................................................................................2521.5030000000300
.........................................................................................................TGGATAATACTTCCAATGTGGATGAC.................................................................................................................................................2621.5030000000300
.........................................................................................................................................................................................................................................................CCGTAACCAACCACCATCCTGCTCTT.2611.0010100000000
........................................................................................................................................TACAAAAATTACTTTGGCTCCTGCC...................................................................................................................2521.0020200000000
.......................TTAGTAGTCTGGAAAATGAGCTAGGC...................................................................................................................................................................................................................................2611.0010000000100
...................................................TAAAACTGTACAAAAAATCCACAAATAGT....................................................................................................................................................................................................2911.0010100000000
.....................................................................................................................................................................................................................................................TTAACCGTAACCAACCACCATC.........2221.0020200000000
.........................................................................................................................................................................................................................................................CCGTAACCAACCACCATCCTGCTCT..2521.0020200000000
.......................TTAGTAGTCTGGAAAATGAGC........................................................................................................................................................................................................................................2111.0010000000100
........................TAGTAGTCTGGAAAATGAGCTAGGC...................................................................................................................................................................................................................................2511.0010100000000
................TCCCTGATTAGTAGTCTGGAAAATGAG.........................................................................................................................................................................................................................................2711.0010000000100
....................TGATTAGTAGTCTGGAAAATGAG.........................................................................................................................................................................................................................................2311.0010100000000
........................TAGTAGTCTGGAAAATGAGC........................................................................................................................................................................................................................................2011.0010000000010
..........................................................................................................................................................................................................................................................CGTAACCAACCACCATCCTGCTCTTT2611.0010100000000
..........................................................................................................................................................................................................................................................CGTAACCAACCACCATCCTGCTCTT.2511.0010100000000
......................................................AACTGTACAAAAAATCCACAAATAG.....................................................................................................................................................................................................2511.0010100000000
....................................................................................................TTTGTTGGATAATACTTCCAATGTGGATG...................................................................................................................................................2921.0020000000020
........................TAGTAGTCTGGAAAATGAGCTAGG....................................................................................................................................................................................................................................2411.0010100000000
................................TGGAAAATGAGCTAGGCGGTAAAA............................................................................................................................................................................................................................2440.7530000000300
................................TGGAAAATGAGCTAGGCGGTAAA.............................................................................................................................................................................................................................2340.7530000000300
..............................TCTGGAAAATGAGCTAGGCGGTAA..............................................................................................................................................................................................................................2440.7530000000300
.............................GTCTGGAAAATGAGCTAGGCG..................................................................................................................................................................................................................................2140.7530300000000
................................TGGAAAATGAGCTAGGCGGTAAAACTG.........................................................................................................................................................................................................................2740.5020000000200
.....................................................................................................................................................................................................................................................TTAACCGTAACCAACCACCATCCTGC.....2620.5010100000000
...........................................................................................................................TGGATGACTATTTTACAAAAATTA.................................................................................................................................2420.5010100000000
.........................................................................................................................................ACAAAAATTACTTTGGCTCCTGCC...................................................................................................................2420.5010100000000
.............................................................................................................................................................................................................CTTCGGCT------------------TATTCAACATTAG................................2120.5010100000000
......................................................................................................................................................................................................................................................TAACCGTAACCAACCACCATCCTGCTC...2720.5010100000000
.............................GTCTGGAAAATGAGCTAGGC...................................................................................................................................................................................................................................2040.5020100100000
........................................................................................................................................TACAAAAATTACTTTGGCTCCTGCCA..................................................................................................................2620.5010100000000
.............................GTCTGGAAAATGAGCTAGGCGGT................................................................................................................................................................................................................................2340.5020200000000
.....................................................................................................................................................................................................................................................TTAACCGTAACCAACCACCATCC........2320.5010100000000
............................................................................................................................................................................................TAAA---AATTA----ACTTCGGCT------------------TATTCAACAT...................................2820.5010100000000
.....................................................................................................................................................................................................................................................TTAACCGTAACCAACCACCATCCTG......2520.5010100000000
..............................TCTGGAAAATGAGCTAGGCGGTA...............................................................................................................................................................................................................................2340.5020000000200
.........................................................................................................................................................................................................................................................CCGTAACCAACCACCATCCTGC.....2220.5010100000000
................................................................................................................TACTTCCAATGTGGATGACTAT..............................................................................................................................................2220.5010100000000
...................................................................................................................................................................CAAAAGTTTAGCAGGCTGGATCAGC........................................................................................2520.5010100000000
.............................................................................................................................................................................................................CTTCGGCT------------------TATTCAACATTAGCTTAA...........................2620.5010100000000
....................................................................................................................................................................................................................T------------------TATTCAACATTAGCTTAACCGT.......................2320.5010100000000
................................................................................................................................GACTATTTTACAAAAATTACTTTG............................................................................................................................2420.5010100000000
.............................GTCTGGAAAATGAGCTAGGCGGTA...............................................................................................................................................................................................................................2440.5020000000200
........................................................................................................TTGGATAATACTTCCAATGTGGATGAC.................................................................................................................................................2720.5010100000000
....................................................................................................................................................................................................................................................CTTAACCGTAACCAACCACCATC.........2320.5010100000000
...............................................................................................................................................................CCACCAAAAGTTTAGCAGGCTGGA.............................................................................................2420.5010100000000
................................................................................................................................GACTATTTTACAAAAATTACTTTGGC..........................................................................................................................2620.5010100000000
.................................................................................................................................................................................................................................................TAGCTTAACCGTAACCAACCACCATCC........2720.5010100000000
......................................................................................................................................................................AAGTTTAGCAGGCTGGATCAGCTAA.....................................................................................2520.5010100000000
..............................TCTGGAAAATGAGCTAGGCGGTAAAAC...........................................................................................................................................................................................................................2740.2510000000100
....................................AAATGAGCTAGGCGGTAAAACTG.........................................................................................................................................................................................................................2340.2510100000000
droPer2
TG---------------------------------------------------------TACAAAAAATCCACAAATAGTTATTCTTTAAAGACATTTAATTTGTTGGATAATACTTGAAATGTGGATGACTATTTTACAAAAATTACTTTGGCTCCTGCCACCAAAAGTTTAGCAGGCTGGATCAGTTAAA---AATTA----ACTTCGGCT------------------TATTCAACATTAGCTTAACCGTAACCAACCACCATCCTGCTCTTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AA------------------------------------------------------------------------------------------------------------T--AGCC------------ACCATATT--AGCGACCATTTTAGAACAACTCACCAAAACTGTAATAGACTCGACCAAACTAA---AATTACCCGACTACGTCTAGCACACACCAGACTCACCCACCAACACTATCTGAACCAAATTCCAACACCACCTTGCCCTTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................TATCTGAACCAAATTCCAACACCACC.........2640.502020000
...................................................................................................................................................................................................................................................TCTGAACCAAATTCCAACACCACC.........2440.502020000
............................................................................................................................................................................................................................................AACACTATCTGAACCAAATTCCAAC...............2540.251010000
..............................................................................................................................................................................................................................................CACTATCTGAACCAAATTCCAACACC............2640.251100000
....................................................................................................................................................................................................................................................CTGAACCAAATTCCAACACCACCTTGC.....2740.251100000
...................................................................................................................................................................................................................................................TCTGAACCAAATTCCAACACCACCC........2540.251010000
...............................................................................................................................................................................................................................................ACTATCTGAACCAAATTCCAACACCACC.........2840.251010000
.....................................................................................................................................................................................................................................................TGAACCAAATTCCAACACCACC.........2240.251100000
...................................................................................................................................................................................................................................................TCTGAACCAAATTCCAACACCACCTTGC.....2840.251010000
.........................................................................................................................................................................................................................................................CCAAATTCCAACACCACCTTGCCCT..2550.201100000
............................................................................................................................................................................................................................................................AATTCCAACACCACCTTGCCC...2150.201100000
.........................................................................................................................................................................................................................................................CCAAATTCCAACACCACCTTGCCC...2450.201010000
..........................................................................................................................................................................................................................ACACCAGACTCACCCACCAACAC...................................2360.171100000
...............................................................................................................................................................................................................................AGACTCACCCACCAACACTATCTGAAC..........................2760.171100000
.........................................................................................................................................................................................................................CACACCAGACTCACCCACCAAC.....................................2260.171100000
...................................................................................................................................................................................................................................TCACCCACCAACACTATCTGAAC..........................2360.171100000
.........................................................................................................................................................................................................................CACACCAGACTCACCCACCAACACTA.................................2660.171100000
.....................................................................................................................................................................................GACCAAACTAA---AATTACCCGACC.....................................................................2370.141010000
...........................................................................................................................................................................................................................CACCAGACTCACCCACCAACACTATC...............................2670.141100000
......................................................................................................................................................................................ACCAAACTAA---AATTACCCGACT.....................................................................2270.141100000
...........................................................................................................................................................................................................................CACCAGACTCACCCACCAACACTATCT..............................2770.141010000
...........................................................................................................................................................................................................................CACCAGACTCACCCACCAACAC...................................2270.141100000
....................................................................................................................................................................................CGACCAAACTAA---AATTACCCGACT.....................................................................2470.141010000
...........................................................................................................................................................................................................................CACCAGACTCACCCACCAACACTATCTG.............................2870.141100000
..................................................................................................................................................................................CTCGACCAAACTAA---AATTACCCGA.......................................................................2470.141010000
...................................................................................................................................................................................TCGACCAAACTAA---AATTACCCGA.......................................................................2370.141010000
.....................................................................................................................................................................................GACCAAACTAA---AATTACCCGACTACGTC................................................................2870.141010000
..........................................................................................................................................................................................AACTAA---AATTACCCGACTACGTC................................................................2390.111010000
...........................................................................................................................................................................................ACTAA---AATTACCCGACTACGTCT...............................................................2390.111010000
droKik1
CG------------------------------------------------------------------------------------------------------------------------------------------ACAACTACTACAGATCCTTCCATCCCAAATCAAGCAGACTCGATCAAACTAA---AATAATACGCCTTAGACTAGGCCACACAAAACTTACACACGAGCACTACTTCAACCAAAACCAACCTCCACCCTGCCCTTTSizeHit CountTotal NormTotal
No Reads
droFic1
CC---------------------------------------------------------------------------------------------------------------------AACATGCGTAACCACATT--AGCGATTTCTTTAGAAATACCCACCAAAAGTGGACCAGACTCGATCAAACCAA---AATTACCCGACTACGTCTAGGACATACAAACCTGACCCACCAACACTATCTGAATCAAAATCCAAAACCACCTTGCCCCAASizeHit CountTotal NormTotal
No Reads
droBia1
GC-TCACGATGCTGATTCCCTGATTTCAAGTGTGC-----------------------------------------------------------------------------------------------------------------------------------------AGAA----------------------------------------------------------------------------------------------GGAGTTSizeHit CountTotal NormTotal
No Reads
droEug1
---------------------------------------------------------------------------------------------------------------------------------------------------------------CCACCAAAACTGGACCAGACTTGACCAAATAAA---AATAATACGACATCGACTAGAACACACAAAAATAACTCACCATCACTATTTAGATAGAAATTCAACACCAATTTGACCGTTSizeHit CountTotal NormTotal
No Reads
dm3
AC---------------------------------------------------------------------------------------------------------GAAT--ACCT------------TACACACG--TGCGATTACCTCAAACAATCCCACCCATACTGGACCAGACTCGACCAAATAAA---AATAATACGACTTCGACTAGGACACACAAACATAACCCACTAACTTTACCTAAATTCAAATTCAATACCAACTTGTCCGTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACAA....................................................242034.956990000000000000000000000000000000000010000001000000000000000300000000000000000000000200000000000003000000000000000000700000000000000100040010000000100300030000000000000000000000000000000000030500000000000310000000000001014213400061623000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACAAAC..................................................262034.2068400000000000000000000000000000000000000111000521000001000000100000000000000000000000000000000000010000000000000000000000000000000000000010002001001003000000000000000000000000000000000000001406000049001811912170130000000002000174008472422610000000000000000000000000000000000000000000000000000000000010000045560000001101000000000000001011000004
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACA.....................................................232029.75595000000000000000000000101000000000000001000002000001020000060000000000000000000000000001000000000000000000000003000000000000000000000000000000000000030000000000000000000000000000000200000006080000670000000012000000000004112292003101931000000000000000000000000000000000000000000000000000000000000000000503000000000000000000000000000000000
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droSec2
-----------------------------------------------------------------------------------------------------------------------------------------------ATTACCTTAAACAATCTCACCCAAATTGGACCAGACTCGACCAAATAAA---AATAATACGACTTCGACTAGGACACACAAACATAACCCACCAACACTACCTAAATCCCAATTCAATACCAACTTGTCCGTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACAAACA.................................................27200.651313000
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACAA....................................................24200.50109001
............................................................................................................................................................................................................................................................CAATTCAATACCAACTTGTCCGTT24200.4598010
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACA.....................................................23200.4599000
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACAAA...................................................25200.3577000
............................................................................................................................................................................................................................................................CAATTCAATACCAACTTGTCCGT.23200.2044000
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACAAAC..................................................26200.2044000
...................................................................................................................................................CCTTAAACAATCTCACCCAAATTGGAC......................................................................................................2760.1711000
.................................................................................................................................................TACCTTAAACAATCTCACCCAAATTGG........................................................................................................2770.1411000
...................................................................................................................................................................................................................................TAACCCACCAACACTACCTAAATC.........................24200.1022000
............................................................................................................................................................................................TAAA---AATAATACGACTTCGACTAGGA...........................................................26200.0510010
...................................................................................................................................................................................................................................TAACCCACCAACACTACCTAAATA.........................24200.0511000
....................................................................................................................................................................................................................................AACCCACCAACACTACCTAAATCC........................24200.0511000
....................................................................................................................................................................................................................TAGGACACACAAACATAACCCACC........................................24200.0511000
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACAAAA..................................................26200.0511000
.........................................................................................................................................................................................................ACGACTTCGACTAGGACACACAAAC..................................................25200.0511000
....................................................................................................................................................................................................................................AACCCACCAACACTACCTAAATC.........................23200.0511000
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACATCT..................................................26200.0511000
.........................................................................................................................................................................................................ACGACTTCGACTAGGACACACAA....................................................23200.0511000
.............................................................................................................................................................................................................................................................AATTCAATACCAACTTGTCCG..21200.0511000
.....................................................................................................................................................................................GACCAAATAAA---AATAATACGACT.....................................................................23200.0511000
.....................................................................................................................................................................................................................................................TAAATCCCAATTCAATACCAACTTGT.....26200.0511000
.......................................................................................................................................................................................................ATACGACTTCGACTAGGACAC........................................................21200.0510100
.........................................................................................................................................................................................................ACGACTTCGACTAGGACACAC......................................................21200.0511000
................................................................................................................................................................CACCCAAATTGGACCAGACTCGACCAA.........................................................................................27200.0510001
...................................................................................................................................................................................................................................TAACCCACCAACACTACCTAAATCCCAA.....................28200.0511000
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACACT...................................................25200.0511000
................................................................................................................................................................CACCCAAATTGGACCAGACTCGA.............................................................................................23200.0511000
........................................................................................................................................................................................................TACGACTTCGACTAGGACACACAAT...................................................25200.0511000
...............................................................................................................................................................................................................TCGACTAGGACACACAAACA.................................................20200.0511000
....................................................................................................................................................................CAAATTGGACCAGACTCGACCAAATA......................................................................................26200.0511000
...................................................................................................................................................................................TCGACCAAATAAA---AATAATACGACTT....................................................................26200.0511000
droYak3
TC------------------------------TGGAAGGTGAACT-GGCGACAAAACAAAAAGAAAATATTATAAACTGTAG-TCTATGGTACCAATTAATTAATTCGAAT--AACT------------CACACACC--TGCGATTACCTTAAGCAATCCCACTAAAATTTGACCAGACTTGACCAAATAAACATAATAATACGACTTCGACTAGGACACACAAATATAACCCACCAACTCTACCTAAATCAAAGTTCAATACCAATTGGTTCATTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................TCTATGGTACCAATTAATTAATTCGAA......................................................................................................................................................................2711.00101000000000
........................................................................................................................................................................TTTGACCAGACTTGACCAAATAAAC...................................................................................2511.00101000000000
................................................................................................................................................................................................................................ATATAACCCACCAACTCTACCT..............................2211.00101000000000
...................................................................................................................................................................................................AATAATACGACTTCGACTAGGACA.........................................................24160.31505000000000
...................................................................................................................................................................................................AATAATACGACTTCGACTAGGAC..........................................................23160.19303000000000
...................................................................................................................................................................................................AATAATACGACTTCGACTAGGACACA.......................................................26150.13202000000000
...................................................................................................................................................................................................AATAATACGACTTCGACTAGGACACACA.....................................................28150.07101000000000
...................................................................................................................................................................................................AATAATACGACTTCGACTAGGACACAC......................................................27150.07100100000000

Generated: 05/18/2015 at 04:42 AM