ID:

dps_2374

 Coordinate:

Unknown_singleton_3835:1394-1544 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.4 -3.1 -3.0 -3.0

Flybase annnotation

exon [dpse_GLEANR_16494:2]; CDS [Dpse\GA25163-cds]; intron [Dpse\GA25163-in]

Repeatable elements

NameClassFamilyStrand
Gypsy-3_DPer-I-intLTRGypsy+
mature
  1. Unknown_group_151:71445-71467 -
  2. Unknown_singleton_3835:815-837 +
  3. dps_2374  Unknown_singleton_3835:1470-1492 +
  4. dps_2376  Unknown_singleton_3835:2125-2147 +
  5. dps_2378  Unknown_singleton_3835:5700-5722 +
  6. Unknown_singleton_3835:6355-6377 +
  7. Unknown_group_642:3327-3349 -
star
  1. Unknown_singleton_3835:849-873 +
  2. dps_2374  Unknown_singleton_3835:1504-1528 +
  3. dps_2378  Unknown_singleton_3835:5734-5758 +
  4. Unknown_singleton_3835:6389-6413 +
  5. Unknown_group_642:3291-3315 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ATAAACCGTATAATACGTCGTGCTCTAGGTACAACGATCCAAAAAACTCGTCAAGCCATGCACAATCGACAGGTGTACGCAAACCAAACAGTTTGAAAGCAACGAACACCATTTAATGGACGTTTCGACAGTTCCATTACTCCCGGACTTACAAAAACTCCCAGACATTCCGTCACACACTTGTATTTTAATCCCAAGTAGGGAAAGAATTCAACTACCGACTCGATCTCGAAGCGATTGCTCCAATATCG
******************************************************************************************************************************...........((....((((.....................))))...........))****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 M059
embryo
 M062
head
..............................................................................................................................GACAGTTCCATTACTCCCGGACT...................................................................................................... 23 0 7 4.43 31 31 0 0 0 0
...........................................AAACTCGTCAAGCCATGCACAATCGA...................................................................................................................................................................................... 26 0 5 1.40 7 7 0 0 0 0
...........................................AAACTCGTCAAGCCATGCACAATCG....................................................................................................................................................................................... 25 0 5 1.00 5 5 0 0 0 0
................................................................................................................................................................CCAGACATTCCGTCACACACTTGTA.................................................................. 25 0 5 0.80 4 1 3 0 0 0
...........................................AAACTCGTCAAGCCATGCACAAT......................................................................................................................................................................................... 23 0 5 0.80 4 3 0 0 0 1
..............................................................................................................................GACAGTTCCATTACTCCCGGACTT..................................................................................................... 24 0 7 0.71 5 5 0 0 0 0
..............................................................................................................................GACAGTTCCATTACTCCCGGAC....................................................................................................... 22 0 7 0.71 5 5 0 0 0 0
................................................................................................................................................................................................................................GATCTCGAAGCGATTGCTGCAAT.... 23 1 5 0.60 3 2 0 0 1 0
...........................................AAACTCGTCAAGCCATGCACAA.......................................................................................................................................................................................... 22 0 5 0.60 3 3 0 0 0 0
...........................................AAACTCGTCAAGCCATGCACAATC........................................................................................................................................................................................ 24 0 5 0.60 3 3 0 0 0 0
................................................................................................................................................................CCAGACATTCCGTCACACACTTG.................................................................... 23 0 5 0.60 3 3 0 0 0 0
.................................................................................AACCAAACAGTTTGAAAGCAACGA.................................................................................................................................................. 24 0 5 0.40 2 2 0 0 0 0
................................................................................................................................................................................................................................GATCTCGAAGCGATTGCTCC....... 20 0 5 0.40 2 2 0 0 0 0
................................................................................................................................................................................................................................GATCTCGAAGCGATTGCTCCAATA... 24 0 5 0.40 2 2 0 0 0 0
.TAAACCGTATAATACGTCGTGCTCTAGG.............................................................................................................................................................................................................................. 28 0 3 0.33 1 1 0 0 0 0
ATAAACCGTATAATACGTCGTGC.................................................................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0
............................................................................................................................................TCCCGGACTTACAAAAACTCCCAGACA.................................................................................... 27 0 7 0.29 2 0 0 2 0 0
.....................GCTCTAGGTACAACGATCC................................................................................................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0
..........TAATACGTCGTGCTCTAGGTA............................................................................................................................................................................................................................ 21 0 4 0.25 1 1 0 0 0 0
............................................................................................................................................................ACTCCCAGACATTCCGTCACACACT...................................................................... 25 0 5 0.20 1 1 0 0 0 0
................................................................................................................................................................................................................................GATCTCGAAGCGGTTGCTCC....... 20 1 5 0.20 1 1 0 0 0 0
.................................................................................................................................................................CAGACATTCCGTCACACACTTGTAGT................................................................ 26 1 5 0.20 1 1 0 0 0 0
..............................................................................................................................................................TCCCAGACATTCCGTCACACACTTGTA.................................................................. 27 0 5 0.20 1 1 0 0 0 0
..........................................GAAACTCGTCAAGCCATGCACAATCGA...................................................................................................................................................................................... 27 1 5 0.20 1 1 0 0 0 0
........................................................................................................................................................................TCCGTCACACACTTGTATTTTAATCC......................................................... 26 0 5 0.20 1 0 1 0 0 0
..............................................................................................................................................................................................................................TCGATCTCGAAGCGGTTGCT......... 20 1 5 0.20 1 1 0 0 0 0
...........................................AAACTCGTCAAGCCATGCACA........................................................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0
.....................................................................................................................................................TACAAAAACTCCCAGACATTCCGTCAC........................................................................... 27 0 5 0.20 1 1 0 0 0 0
...................................................................................................................................................................................................................CAACTACCGACTCGATCTCGAAGCG............... 25 0 5 0.20 1 1 0 0 0 0
................................................................................................................................................................................................................................GATCTCGAAGCGGTTGCTCCAATA... 24 1 5 0.20 1 1 0 0 0 0
.......................................................................................................................................................................................................................TACCGACTCGATCTCGAAGCGGTTT........... 25 2 5 0.20 1 1 0 0 0 0
................................................................................................................................................................................................................................GATCTCGAAGCGATTGCTCCAAT.... 23 0 5 0.20 1 1 0 0 0 0
................................................................................................................................................................CCAGACATTCCGTCACACACTTGT................................................................... 24 0 5 0.20 1 1 0 0 0 0
.....................................................................................................................................................TACAAAAACTCCCAGACATTCCGTCA............................................................................ 26 0 5 0.20 1 1 0 0 0 0
........................................................................................................................................................................................................................ACCGACTCGATCTCGAAGCGATTG........... 24 0 5 0.20 1 1 0 0 0 0
..........................................................................................................................................................AAACTCCCAGACATTCCGTCACACACT...................................................................... 27 0 5 0.20 1 1 0 0 0 0
..............................................................................................................................................................TCCCAGACATTCCGTCACACACT...................................................................... 23 0 5 0.20 1 1 0 0 0 0
................................................................................AAACCAAACAGTTTGAAAGCAACG................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0
...............................................................................................................................................................................................................AATTCAACTACCGACTCGATCTCGAAG................. 27 0 6 0.17 1 1 0 0 0 0
..................................................................................................................................................................................................................TCAACTACCGACTCGATCTCGAAG................. 24 0 6 0.17 1 1 0 0 0 0
.............................................................................................................................................CCCGGACTTACAAAAACTCCCAGACA.................................................................................... 26 0 7 0.14 1 1 0 0 0 0
.................................................................................................................................AGTTCCATTACTCCCGGACTTA.................................................................................................... 22 0 7 0.14 1 1 0 0 0 0
..............................................................................................................................................CCGGACTTACAAAAACTCCCAGAC..................................................................................... 24 0 7 0.14 1 1 0 0 0 0
.......................................................................................................................................................................TTCCGTCACACACTTGTAGTTTAACCC......................................................... 27 2 7 0.14 1 1 0 0 0 0
..............................................................................................................................GACAGTTCCATTGCTCCCGGA........................................................................................................ 21 1 7 0.14 1 1 0 0 0 0
.........................................................................................................ACACCATTTAATGGACGTTTCGACAGT....................................................................................................................... 27 0 11 0.09 1 1 0 0 0 0
.................................................................................................AGCAACGAACACCATTTAATGGAC.................................................................................................................................. 24 0 11 0.09 1 1 0 0 0 0
................................................................................................AAGCAACGAACACCATTTAATGGAC.................................................................................................................................. 25 0 11 0.09 1 1 0 0 0 0
..................................................................................................GCAACGAACACCATTTAATGGAC.................................................................................................................................. 23 0 11 0.09 1 1 0 0 0 0
....................................................................................................................TGGACGTTTCGACAGTTCCATTACTCCC........................................................................................................... 28 0 12 0.08 1 1 0 0 0 0
................................AACGATCCAAAAAACTCGTCAAGC................................................................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0

Anti-sense strand reads

TATTTGGCATATTATGCAGCACGAGATCCATGTTGCTAGGTTTTTTGAGCAGTTCGGTACGTGTTAGCTGTCCACATGCGTTTGGTTTGTCAAACTTTCGTTGCTTGTGGTAAATTACCTGCAAAGCTGTCAAGGTAATGAGGGCCTGAATGTTTTTGAGGGTCTGTAAGGCAGTGTGTGAACATAAAATTAGGGTTCATCCCTTTCTTAAGTTGATGGCTGAGCTAGAGCTTCGCTAACGAGGTTATAGC
******************************************************************...........((....((((.....................))))...........))****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 GSM343916
embryo
 GSM444067
head
 M059
embryo
...............................................................................................................AAATTACCTGCAAAGCTGTCAAGGT................................................................................................................... 25 0 13 3.54 46 2 35 9 0 0 0 0
.................................................................AGCTGTCCACATGCGTTTGGTTTGT................................................................................................................................................................. 25 0 3 3.00 9 6 0 3 0 0 0 0
.................................................................................................................................................CTGAATGTTTTTGAGGGTCTGTAAG................................................................................. 25 0 7 2.43 17 7 2 1 7 0 0 0
..............................................................................................................TAAATTACCTGCAAAGCTGTCAAGGT................................................................................................................... 26 0 13 1.77 23 2 17 4 0 0 0 0
...........................CCATGTTGCTAGGTTTTTTGAGCAGT...................................................................................................................................................................................................... 26 0 3 1.67 5 3 2 0 0 0 0 0
............................................................................................................GGTAAATTACCTGCAAAGCTGTCAAGGT................................................................................................................... 28 0 12 1.67 20 9 6 5 0 0 0 0
........................................................................................................................................................................................................CCCTTTCTTAAGTTGATGGCTGAGCT......................... 26 0 5 1.60 8 4 4 0 0 0 0 0
.................................................................................TTGGTTTGTCAAACTTTCGTTGCTTGT............................................................................................................................................... 27 0 5 1.40 7 4 0 3 0 0 0 0
.................................................................................................................ATTACCTGCAAAGCTGTCAAGGT................................................................................................................... 23 0 14 1.29 18 3 12 3 0 0 0 0
..................................................................................................................................................TGAATGTTTTTGAGGGTCTGTAAG................................................................................. 24 0 7 1.14 8 4 3 1 0 0 0 0
.............................................................................................................GTAAATTACCTGCAAAGCTGTCAAGGT................................................................................................................... 27 0 13 1.00 13 5 5 3 0 0 0 0
...............................................................................................................................................GCCTGAATGTTTTTGAGGGTCTGTAAG................................................................................. 27 0 7 0.86 6 6 0 0 0 0 0 0
..................................................................................................................TTACCTGCAAAGCTGTCAAGGT................................................................................................................... 22 0 14 0.86 12 10 1 1 0 0 0 0
.................................................................................TTGGTTTGTCAAACTTTCGTTGCTT................................................................................................................................................. 25 0 5 0.80 4 3 1 0 0 0 0 0
.........................................................................................................................................................................GGCAGTGTGTGAACATAAAATTAGGGT....................................................... 27 0 5 0.80 4 0 2 2 0 0 0 0
..................................................................................................................................CAAGGTAATGAGGGCCTGAATGTT................................................................................................. 24 0 7 0.71 5 1 4 0 0 0 0 0
..............................................................................................................................................................................................................CTTAAGTTGATGGCTGAGCTAGAGCT................... 26 0 7 0.71 5 0 3 2 0 0 0 0
...................................................................CTGTCCACATGCGTTTGGTTTGT................................................................................................................................................................. 23 0 3 0.67 2 2 0 0 0 0 0 0
..........................TCCATGTTGCTAGGTTTTTTGAGCAGT...................................................................................................................................................................................................... 27 0 3 0.67 2 2 0 0 0 0 0 0
..............................................................GTTAGCTGTCCACATGCGTTTGGTTTGT................................................................................................................................................................. 28 0 3 0.67 2 2 0 0 0 0 0 0
................................................................................................................................................................................................................TAAGTTGATGGCTGAGCTAGAGCTTC................. 26 0 6 0.67 4 3 0 1 0 0 0 0
...................................................................................GGTTTGTCAAACTTTCGTTGCTTGT............................................................................................................................................... 25 0 5 0.60 3 3 0 0 0 0 0 0
................................................................................................................................................................GGTCTGTAAGGCAGTGTGTGAACATAAA............................................................... 28 0 5 0.60 3 0 3 0 0 0 0 0
................................................................................................................................................................................................................TAAGTTGATGGCTGAGCTAGAGCTT.................. 25 0 7 0.57 4 4 0 0 0 0 0 0
...................................................................................................................................................GAATGTTTTTGAGGGTCTGTAAG................................................................................. 23 0 7 0.57 4 1 3 0 0 0 0 0
..................................................................................................................................................................................................................AGTTGATGGCTGAGCTAGAGCTTC................. 24 0 6 0.50 3 2 1 0 0 0 0 0
................................................................................................................................................................................................................TAAGTTGATGGCTGAACTAGAGCTTC................. 26 1 6 0.50 3 0 3 0 0 0 0 0
..................................................................................................................................................................................................................AGTTGATGGCTGAACTAGAGCTTC................. 24 1 6 0.50 3 0 3 0 0 0 0 0
..............................................................................................................AAAATTACCTGCAAAGCTGTCAAGGT................................................................................................................... 26 1 13 0.46 6 0 5 1 0 0 0 0
.............................................................................................................................................................................................................CCTTAAGTTGATGGCTGAGCTAGAGCT................... 27 1 7 0.43 3 0 3 0 0 0 0 0
................................................................................................................................................CCTGAATGTTTTTGAGGGTCTGTAAG................................................................................. 26 0 7 0.43 3 2 0 0 1 0 0 0
.................................................................................................................................................................GTCTGTAAGGCAGTGTGTGAACATA................................................................. 25 0 5 0.40 2 2 0 0 0 0 0 0
............................................................................................................................................................................................................................TGAGCTAGAGCTTCGCTAACGACGT...... 25 1 5 0.40 2 1 0 0 1 0 0 0
...............................................................................................................................................................GGGTCTGTAAGGCAGTGTGTGAACATA................................................................. 27 0 5 0.40 2 2 0 0 0 0 0 0
................................................................................................................................................................GGTCTGTAAGGCAGTGTGTGAACAT.................................................................. 25 0 5 0.40 2 0 0 2 0 0 0 0
................................................................................................................AATTACCTGCAAAGCTGTCAAGGT................................................................................................................... 24 0 13 0.38 5 1 3 1 0 0 0 0
.............................ATGTTGCTAGGTTTTTTGAGCAGT...................................................................................................................................................................................................... 24 0 3 0.33 1 0 0 1 0 0 0 0
................................................................AAAATGTCCACATGCGTTTGGTTTGT................................................................................................................................................................. 26 3 3 0.33 1 1 0 0 0 0 0 0
............................CATGTTGCTAGGTTTTTTGAGCAGT...................................................................................................................................................................................................... 25 0 3 0.33 1 0 1 0 0 0 0 0
..................................................AGTTCGGTACGTGTTAGCTGTCCACAT.............................................................................................................................................................................. 27 0 3 0.33 1 0 0 1 0 0 0 0
........................................................GTACGTGTTAGCTGTCCACATGCGT.......................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................GGTTCATCCCTTTCTTAAGTTGAT.................................. 24 0 6 0.33 2 2 0 0 0 0 0 0
..............................................................GTTAGCTGTCCACATGCGT.......................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0
...TTGGCATATTATGCAGCACGAGA................................................................................................................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0 0 0
.ATTTGGCATATTATGCAGCACGAG.................................................................................................................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................GGTACGTGTTAGCTGTCCACATGCGT.......................................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0
............................................................................................................GGTAAATTACATGCAAAGCTGTCAAGGT................................................................................................................... 28 1 12 0.33 4 4 0 0 0 0 0 0
...TTGGCATATTATGCAGCACGAGATCCAT............................................................................................................................................................................................................................ 28 0 3 0.33 1 1 0 0 0 0 0 0
..........................................................ACGTGTTAGCTGTCCACATGCGTT......................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................GGTACGTGTTAGCTGTCCACAT.............................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0
......................................................CGGTACGTGTTAGCTGTCCACATGCGT.......................................................................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
................................................................TAGCTGTCCACATGCGTTTGGTTTGT................................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TTAAGTTGATGGCTGAGCTAGAGCTTC................. 27 0 6 0.33 2 0 0 2 0 0 0 0
...............................................................ATAGCTGTCCACATGCGTTTGGTTTGT................................................................................................................................................................. 27 1 3 0.33 1 1 0 0 0 0 0 0
.....................................................................GTCCACATGCGTTTGGTTTGTCAAACT........................................................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................GTTCATCCCTTTCTTAAGTTGAT.................................. 23 0 6 0.33 2 2 0 0 0 0 0 0
..........................................................ACGTGTTAGCTGTCCACATGCGT.......................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................GTTGATGGCTGAGCTAGAGCTT.................. 22 0 7 0.29 2 2 0 0 0 0 0 0
................................................................................................................................................................................................................TAAGTTGATGGCTGAGCTAGAGC.................... 23 0 7 0.29 2 0 2 0 0 0 0 0
.........................................................................................................................................ATGAGGGCCTGAATGTTTTTGAGGGT........................................................................................ 26 0 7 0.29 2 2 0 0 0 0 0 0
..............................................................................................................................................................................................TAGGGTTCATCCCTTTCTTAAGTTGAT.................................. 27 0 4 0.25 1 1 0 0 0 0 0 0
...........................CCATGTTGCTAGGTTTTTTGAGCAG....................................................................................................................................................................................................... 25 0 4 0.25 1 0 1 0 0 0 0 0
...............GCAGCACGAGATCCATGTTGCTAGGTT................................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................TAGGGTTCATCCCTTTCTTAAGTTG.................................... 25 0 4 0.25 1 1 0 0 0 0 0 0
....................ACGAGATCCATGTTGCTAGGTTTTTT............................................................................................................................................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................TAGGGTTCATCCCTTTCTTAAGTTGA................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
...............GCAGCACGAGATCCATGTTGCTAGGT.................................................................................................................................................................................................................. 26 0 4 0.25 1 1 0 0 0 0 0 0
...................CACGAGATCCATGTTGCTAGGTTTT............................................................................................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0
.............................................TGAGCAGTTCGGTACGTGTTAGCTGT.................................................................................................................................................................................... 26 0 4 0.25 1 0 0 0 1 0 0 0
...................................................................................GGTTTGTCAAACTTTCGTTGCTTG................................................................................................................................................ 24 0 5 0.20 1 1 0 0 0 0 0 0
...............................................................................................................................................................GGGTCTGTAAGGCAGTGTGTGAACAT.................................................................. 26 0 5 0.20 1 1 0 0 0 0 0 0
..........................................................................................................................................................TTTGAGGGTCTGTAAGGCAGTGT.......................................................................... 23 0 5 0.20 1 1 0 0 0 0 0 0
....................................................................................................................................................................TGTAAGGCAGTGTGTGAACAT.................................................................. 21 0 5 0.20 1 1 0 0 0 0 0 0
..................................................................................TGGTTTGTCAAACTTTCGTTGCTTGT............................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0
.........................................................................................................................................................................GGCAGTGTGTGAACATAAAAT............................................................. 21 0 5 0.20 1 1 0 0 0 0 0 0
.......................................................................................................................................................................AAGGCAGTGTGTGAACATAAAA.............................................................. 22 0 5 0.20 1 1 0 0 0 0 0 0
..........................................................................................................................................................................GCAGTGTGTGAACATAAAATTAGGGT....................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0
.......................................................................................................................................................GTTTTTGAGGGTCTGTAAGGCAG............................................................................. 23 0 5 0.20 1 1 0 0 0 0 0 0
....................................................................................................................................................................TGTAAGGCAGTGTGTGAACATA................................................................. 22 0 5 0.20 1 1 0 0 0 0 0 0
.......................................................................................................................................................................AAGGCAGTGTGTGAACATAAAATT............................................................ 24 0 5 0.20 1 0 1 0 0 0 0 0
..................................................................................................................................................................TCTGTAAGGCAGTGTGTGAACAT.................................................................. 23 0 5 0.20 1 1 0 0 0 0 0 0
......................................................................................................................................................................TAAGGCAGTGTGTGAACATA................................................................. 20 0 5 0.20 1 1 0 0 0 0 0 0
................................................................................ATTGGTTTGTCAAACTTTCGTTGCT.................................................................................................................................................. 25 1 5 0.20 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................CGAGCTAGAGCTTCGCTAACGACGT...... 25 2 5 0.20 1 1 0 0 0 0 0 0
..............................................................................................................................................................AGGGTCTGTAAGGCAGTGTGTGAACA................................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0
..............................................................................................................................................................AGGGTCTGTAAGGCAGTGTGTGAACAT.................................................................. 27 0 5 0.20 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................CCTTTCTTAAGTTGATGGCTGAACT......................... 25 1 5 0.20 1 1 0 0 0 0 0 0
...................................................................................GGTTTGTCAAACTTTCGTTGCTT................................................................................................................................................. 23 0 5 0.20 1 0 1 0 0 0 0 0
........................................................................................................................................................TTTTTGAGGGTCTTTAAGGCAGT............................................................................ 23 1 5 0.20 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................GAGCTAGAGCTTCGCTAACGACG....... 23 1 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................................................................................GAGGGTCTGTAAGGCAGTGTGTGAAC.................................................................... 26 0 5 0.20 1 1 0 0 0 0 0 0
.....................................................................................................................................................................GTAAGGCAGTGTGTGAACATA................................................................. 21 0 5 0.20 1 0 0 0 0 0 1 0
............................................................................................................................................................................................................................TGAGCTAGAGCTTCGCTAACGAC........ 23 1 5 0.20 1 1 0 0 0 0 0 0
......................................................................................TTGTCAAACTTTCGTTGCTTG................................................................................................................................................ 21 0 5 0.20 1 1 0 0 0 0 0 0
.....................................AGGTTTTTTGAGCAGTTCGGTACGT............................................................................................................................................................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0
......................................................................................TTGTCAAACTTTCGTTGCTTGTGG............................................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................GAGCTAGAGCTTCGCCAACGAGGTT..... 25 1 5 0.20 1 1 0 0 0 0 0 0
...TTGGCATATTATGCAGCACGAGATCCAC............................................................................................................................................................................................................................ 28 1 5 0.20 1 1 0 0 0 0 0 0
.................................................................................TTGGTTTGTCAAACTTTCGTTGCT.................................................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TGGCTGAGCTAGAGCTTCGCTAAC........... 24 0 5 0.20 1 1 0 0 0 0 0 0
....................................................................................GTTTGTCAAACTTTCGTTGCTTGT............................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0
........................................................................................................................................................................AGGCAGTGTGTGAACATAAAATTAGGGT....................................................... 28 0 5 0.20 1 1 0 0 0 0 0 0
................................................................................................................................................................GGTCTGTAAGGCAGTGTGT........................................................................ 19 0 5 0.20 1 1 0 0 0 0 0 0
.....................................................................................ATTGTCAAACTTTCGTTGCTTGTGG............................................................................................................................................. 25 1 5 0.20 1 1 0 0 0 0 0 0
.........................................................................................................TGTGGTAAATTACCTGCAAAGCTGT......................................................................................................................... 25 0 11 0.18 2 2 0 0 0 0 0 0
........................................................................CACATGCGTTTGGTTTGTCAAACT........................................................................................................................................................... 24 0 6 0.17 1 0 0 0 0 0 0 1
.................................................................................................................................................CTGAATGTTTTTGAGGGTCTGTAAGG................................................................................ 26 0 6 0.17 1 1 0 0 0 0 0 0
.......................................................................CCACATACGTTTGGTTTGTCAAACTTT......................................................................................................................................................... 27 1 6 0.17 1 1 0 0 0 0 0 0
.......................................................................CCACATGCGTTTGGTTTGT................................................................................................................................................................. 19 0 6 0.17 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................GTTGATGGCTGAGCTAGAGCTTC................. 23 0 6 0.17 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................................TTGATGGCTGAGCTAGAGCTTC................. 22 0 6 0.17 1 1 0 0 0 0 0 0
............................................................................TGCGTTTGGTTTGTCAAACTTTCGT...................................................................................................................................................... 25 0 6 0.17 1 1 0 0 0 0 0 0
..........................................................................................................................................TGAGGGCCTGAATGTTTTTGAGGGT........................................................................................ 25 0 7 0.14 1 1 0 0 0 0 0 0
..............................................................................................................................................AACCTGAATGTTTTTGAGGGTCTG..................................................................................... 24 2 7 0.14 1 1 0 0 0 0 0 0
...............................................................................................................................TGTCAAGGTAATGAGGGCCTGAATGT.................................................................................................. 26 0 7 0.14 1 1 0 0 0 0 0 0
.................................TGCTAGGTTTTTTGAGCAGT...................................................................................................................................................................................................... 20 0 14 0.14 2 1 0 0 1 0 0 0
..............................................................................................................................................................................................................CTTAAGTTGATGGCTGAGCTAGAGCTT.................. 27 0 7 0.14 1 1 0 0 0 0 0 0
.......................................................................................................................................TAATGAGGGCCTGAATGTTTTT.............................................................................................. 22 0 7 0.14 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................CTTAAGTTGATGGCTGAGCTAGAGC.................... 25 0 7 0.14 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................................AAGTTGATGGCTGAGCTAGAGCTT.................. 24 0 7 0.14 1 1 0 0 0 0 0 0
...............................................................................................................................................ACCTGAATGTTTTTGAGGGTCTG..................................................................................... 23 1 7 0.14 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................TAAGTTGATGGCTGAGCTAGAGCT................... 24 0 7 0.14 1 1 0 0 0 0 0 0
....................................................................................................................................AGGTAATGAGGGCCTGAAT.................................................................................................... 19 0 7 0.14 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................TTAAGTTGATGGCTGAGCTAGAGCTT.................. 26 0 7 0.14 1 0 1 0 0 0 0 0
.................................................................................................................................................CTGAATGTTTTTGAGGGTCTGTAAA................................................................................. 25 1 7 0.14 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TTAAGTTGATGGCTGAGCTAGAGC.................... 24 0 7 0.14 1 0 1 0 0 0 0 0
...............................GTTGCTAGGTTTTTTGAGCAGT...................................................................................................................................................................................................... 22 0 14 0.14 2 2 0 0 0 0 0 0
..............................................AAGCAGTTCGGTACGTGT........................................................................................................................................................................................... 18 1 8 0.13 1 1 0 0 0 0 0 0
............................................TCGAGCAGTTAGGTACGT............................................................................................................................................................................................. 18 2 8 0.13 1 0 0 0 0 1 0 0
.....................................................................................................................................................ATGTTTTTGAGGGTCTGTAAG................................................................................. 21 0 10 0.10 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................AAAAAATTAGGGTTCGTGCCT............................................... 21 3 11 0.09 1 1 0 0 0 0 0 0
...............................................................................................TTTCGTTGCTTGTGGTAAATTACCTG.................................................................................................................................. 26 0 11 0.09 1 0 0 1 0 0 0 0
...........................................TTAGCGCAGTTCGGTACGTA............................................................................................................................................................................................ 20 3 11 0.09 1 0 0 0 0 1 0 0
..................................................................................................CGTTGCTTGTGGTAAATTACCTGC................................................................................................................................. 24 0 11 0.09 1 1 0 0 0 0 0 0
............................................................................................................GGTAAATTACATGCAAAGCTGTCAAGG.................................................................................................................... 27 1 12 0.08 1 1 0 0 0 0 0 0
.............................................................................................................GTAAATTACCTGCAAAGCTGTCAA...................................................................................................................... 24 0 13 0.08 1 1 0 0 0 0 0 0
.............................................................................................................AAAAATTACCTGCAAAGCTGTCAAGGT................................................................................................................... 27 2 13 0.08 1 1 0 0 0 0 0 0
................................................................................................TTCGTTGCTTGTGGTAAATT....................................................................................................................................... 20 0 13 0.08 1 0 0 0 1 0 0 0
...............................................................................................................AAATTATATGCAAAGCTGTCAAGGT................................................................................................................... 25 2 13 0.08 1 0 0 1 0 0 0 0
...................................................................................................................TACCTGCAAAGCTGTCAAGGTAA................................................................................................................. 23 0 13 0.08 1 1 0 0 0 0 0 0
...................................................................................................................TACCTGCAAAGCTGTCAAGGTAAT................................................................................................................ 24 0 13 0.08 1 0 1 0 0 0 0 0
...................................................................................................................TACCTGCAAAGCTGTCAAGGT................................................................................................................... 21 0 14 0.07 1 1 0 0 0 0 0 0
.....................................................................................................................CCTGCAAAGCTGTCAAGGT................................................................................................................... 19 0 15 0.07 1 0 1 0 0 0 0 0
...............................GTTGCTAGGTTTTTTGAGCAG....................................................................................................................................................................................................... 21 0 15 0.07 1 1 0 0 0 0 0 0
.....................................................................................................................................GGTAATGAGGGACTGAATGTTT................................................................................................ 22 1 16 0.06 1 1 0 0 0 0 0 0
.................................TGCTCGATTTTTTGAGCAG....................................................................................................................................................................................................... 19 2 17 0.06 1 0 0 0 0 1 0 0
............................................................................................................................................................................................................TTCTTAAGGTGTTGGGTGAG........................... 20 3 17 0.06 1 0 0 0 0 0 1 0
...................................................................................................................AAAATGCAAAGCTGTCAAGGT................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_singleton_3835:1344-1594 + dps_2374 ATAAACCGTATAATACGTCGTGCTCTAGGTACAACG------ATCCAAAAAACTCGTCAAGCCATGCACAATCGACAGGTGTACGCAAACCAAACAGTTTGAAAGCAACGAACACCATTTAATGGACGTTTCGA---------------------------------CAGTTCCATTA-----C--------------TCCCG---------GACTTACAAAAACTCCCAGACATTCCGTCACACACTTGTATTTT-------------------------------------------AATCC------------------------CAAGTAGGGAAA---------G--AATTCAACTACCGACT-------------------CGATCTCGAA----GCG-----ATTGCTC---------C---AATATCG
droPer2 scaffold_4742:1043-1285 - ATAAACC---------GTTGTGCTCTAGGTGCAACG------ATCCAAAAAACTCGTCAAGCCGTGCACAATCGACAGGTGCACGCAAACCAAACAGTTCGAAAGCAACGAACACCATTTAATGGACGTTTCGA---------------------------------CAGTTCCATTA-----C--------------TCCCG---------GACTTACAAAAACTCCCAGACATTCCGTCACACACTTGTATTTT-------------------------------------------AACCC------------------------CAAGTAGGGAAA---------G--AATTCAACTACCGACT-------------------CGATCTCGAAA---GCG-----ATTGCTC---------C---AATATCG
droVir3 scaffold_12967:82673-82914 + ATAGACC---------AAGTTGTGCTAGATGCAGTC------ATGCAACAAACTCTTTGCGGCGTGCACCTCCGAAAAGTGCACGCAGACTATTAATATCGAAGGCGACCAACATAAATTATAAGCTT--CC-----AGT-----------------------------GCTTTAATAGGTATC--------------TACCA---------GACTTTACAGACTTACCAGATGTACCTTTACACCATCGTCTTCA-------------------------------------------AAATACAAATAATCAAGTCGTCAGCCCCCATAGTAAGAGA-----------ATGACACGTTCC---------------------------------------------------------------A---AGTTTCG
droMoj3 scaffold_6482:1053604-1053832 + ATAAGCC---------TTCGTGCATGAAATGCAACA--AGC-ATTCAAAAAACTTGTCAGCCCGTGCACCGTCGACCAGTGCACGCAAACAAATGAAGTCGACATCAACCAACACATAGATTTTC------------AATCTGTTGACTATACTAACGACCCAATTACGACCTCACAA-----CTTTATGATGCCCA---------------------------TTCCGAAACAA-------------------------------------------------------------------------------------TACACACACAAATAAGCTC----------------------C-------------------AAATCTCGCTCTCAACT---ACGTC-------------------G---TATCTCA
droGri2 scaffold_15120:70868-71099 + ACAAGCC---------GTAATGTGCCAAGTGCAATG------CTTAAAAA----CGAAATGTCACGAAATGTCAACCAGTGCACGCAAT-------TTTCGAAGGGAACGAACACCGAGTAACTTAT-----GA---------------------------------AATGTTCAGTT-----CACTCGACCAACTAC-----CGGAAAT--GACTTTAC-----TCGCTAGTAGTCCTTTACCTAATTGTT---------------------------------------------------------------------CAAAAA-----------ACTTGACCAAAC-------AACTACCTGATGTTATTAAAATC-AAAACCCA-----------------------TAGT---------C---AATAACG
droAna3 scaffold_1340:5396-5633 + ATAAACC---------TACATGTCGGACTTGTAACCCAAACGCTCAAAAAAACTATCAAGGGCGTGCACCACAGAAAAGTGCACGCAAACAGTTAATCAGCATAGCGACCAATACAGAGTAACAC--TTTCCGA---------------------------------CGACCCCATTT-----CTGTAGGCCCCCTAC-----CGCAACCTA----------------AATGTATACCATTCCCTATATCTA---------------------------------------------------------------------AGATAG-----------ACGTTAAGAGAA-------AACGGTCTACTGG-------------------------------TCGTCGAG-AAGCTTTTA------A---AAAACCA
droBip1 scf7180000391849:26759-26985 + ATAAACC---------TACATGTCGGACTTGTA-----------------AACTACCAAGGGCGTGCACCACAGAAAAGTGCACGCAAACAGATAATCAGCATAGCGACCAATACAGAGTAACAC--TTTCCGA---------------------------------CGACCTCACGT-----CTCTAGGCTCCCAAC-----CGCAACCTA----------------AATGTATACCATTTCCTATATGTA---------------------------------------------------------------------AGATAG-----------ACGTTAAGAGAA-------AACGGTCTACTGG-------------------------------TCGTCGAG-AAGATTTAAAAAAAAC---AATGTAA
droKik1 scf7180000302426:3380-3645 + CTACAA-------AACGGCGTGCCCAAAATGTAGTC------AAGCAAAAAACTTCTCAGGCCGTGCACCACCGAAAGGTGCACGCAGACAAGTGGCGTCGAAAGCGACGAATACAGATTAAAGTCCACAATCA---------------------------------TATCTTCATCAAGTA----------------TCCCC---------GACTTTTCACATATCCCTGACATTCCTTTACACAAACGTTCTTTCAAGATAACAACT----------------------------------------------AACATTAGTCGCCCAAATAAAAGA-----------ACAGTTCGGTCAAAGTT-------------A------CGAATC--AA-ACA--------ATTCTAC---------C---ATCAACG
droFic1 scf7180000454129:1363-1631 + CCACAA-------GTCGTCATGCCCAAAATGTAGTC------AGTCAAAAAACTACTCAGCCCGTGTACCACAGAAAGGTGCACGCAGACAAGTGGCGTCGAAAGCGACGAATACAGATTAAAGTCCACCATTA---------------------------------TATCTCCATCAAGTA----------------TCCCA---------GACTTTTCACATATCCCTGACATTCCTTTACACAAACGTTCTTTCAGAGAAACACCT----------------------------------------------ATTATTAGACACACAAATAAAAGA-----------AAAGTTCGATCAAAGTT-------------A------CGAATC--AA-AGA--------ATTCTAC---------CATAAATGTAG
droEle1 scf7180000487993:3798-4027 + ATAAACC---------ATCCTGTACGAAATGTACTG------GCTCAAAAAACTTAGTAGATCGTGCACCAGTGGCAAGTGCACGGAAGAAACAAACAGCGAATACGACTCAGATGGATTTGT--------------AG----------------------------------------------------------------AGCCACCTCAATCTACAAAAACC------------------------ATTTTACCAGACAAAACCACAAACCTGCCAGTACCAAAACTTTTGCATTCACC----------------------AC--CAGAAGAAAAA---------GATTGT--------GCTT-------------G------CGAATC--AG-TGA--------AT------------------ACTATAG
droRho1 scf7180000777934:6440-6685 + ATAAGCC---------CAATTGTAGAAAGTGTGGTTCAAATGCTTCAAAAAACTGCCAAGCTCGGGCACCGCAGAAAGGTGCACGCAAACATATGGTCTGCAAAGCGACCAATACTAGTCAAATTAGTCGGGCCCGCAGA-----------------------------GCGCATATATCAACC--------------TACTG---------AACTTTC------------------TTACCCAGAATTATCTTTT--AATTACCAATT------------------------TGCG--TTACC---------------------AG-----------AAGTACATAAAA-------ACCGTTCAAAATG-------------------------------TCGTGGAA-TCGCTT---------T---AAAAAAA
droTak1 scf7180000414748:23360-23587 - ATAAGCC---------GAATTGCAGCAATTGTAACA------ACTCAAAAAACCCTCGAGGGCGTGCACTGGGGACCAATGCACGCAAACGGACGATCTCGAGAGCAACCAATACAGATTAAGCGATCCTTGCT---------------------------------CGGAATCTGTA-----C--------------CACCG---------AACTTTCCATATTCAAAGAATTTACCAACACACTCCAATTTTCT-------------------------------------------ACACC------------------------A------------------------GACCGGTCAAACTC-------------G------AAAACA--GAA---GCGTAGAA-TAG----------------CTTATAG
droYak3 v2_chrUn_293:50866-51113 - ACAAACC---------CAGCTGTAGCAGTTGCAATG------GTTCAAAAAACTTAGAAGGGCGTGCACTGTTGAACAATGAACGCAAACGGATGGTTTCAAAAGCAACCAACACCAAGTAACGGACGGTTGCT---------------------------------CAGTTCCTTTA-----C--------------CACCT---------GACTTTCAAAATCAGCCAACTTTACCTTTGCACCAAAAGGTGCA--------CAAAC--------------------------------------AAGAAGAATTTGTCAGATCC-----------AAACGGAGTCAA-------ATC-GAAA-T-------------A------GGGC----------TCGTAGAA-TTG----------------ACTATAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ATAAACCGTATAATACGTCGTGCTCTAGGTACAACG------ATCCAAAAAACTCGTCAAGCCATGCACAATCGACAGGTGTACGCAAACCAAACAGTTTGAAAGCAACGAACACCATTTAATGGACGTTTCGA---------------------------------CAGTTCCATTA-----C--------------TCCCG---------GACTTACAAAAACTCCCAGACATTCCGTCACACACTTGTATTTT-------------------------------------------AATCC------------------------CAAGTAGGGAAA---------G--AATTCAACTACCGACT-------------------CGATCTCGAA----GCG-----ATTGCTC---------C---AATATCGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................GA---------------------------------CAGTTCCATTA-----C--------------TCCCG---------GACT............................................................................................................................................................................................................................2374.433103100000000
.................................................AAACTCGTCAAGCCATGCACAATCGA.........................................................................................................................................................................................................................................................................................................................................................................2651.4070700000000
.................................................AAACTCGTCAAGCCATGCACAATCG..........................................................................................................................................................................................................................................................................................................................................................................2551.0050500000000
...................................................................................................................................................................................................................................CCAGACATTCCGTCACACACTTGTA........................................................................................................................................................................................2550.8040100000300
.................................................AAACTCGTCAAGCCATGCACAAT............................................................................................................................................................................................................................................................................................................................................................................2350.8040301000000
....................................................................................................................................GA---------------------------------CAGTTCCATTA-----C--------------TCCCG---------GACTT...........................................................................................................................................................................................................................2470.7150500000000
....................................................................................................................................GA---------------------------------CAGTTCCATTA-----C--------------TCCCG---------GAC.............................................................................................................................................................................................................................2270.7150500000000
.................................................AAACTCGTCAAGCCATGCACAA.............................................................................................................................................................................................................................................................................................................................................................................2250.6030300000000
.................................................AAACTCGTCAAGCCATGCACAATC...........................................................................................................................................................................................................................................................................................................................................................................2450.6030300000000
...................................................................................................................................................................................................................................CCAGACATTCCGTCACACACTTG..........................................................................................................................................................................................2350.6030300000000
.......................................................................................AACCAAACAGTTTGAAAGCAACGA.....................................................................................................................................................................................................................................................................................................................................2450.4020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGAA----GCG-----ATTGCTC---------C---.......2050.4020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGAA----GCG-----ATTGCTC---------C---AATA...2450.4020200000000
.TAAACCGTATAATACGTCGTGCTCTAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................2830.3310100000000
ATAAACCGTATAATACGTCGTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310100000000
......................................................................................................................................................................................................TCCCG---------GACTTACAAAAACTCCCAGACA..........................................................................................................................................................................................................2770.2920000000020
.....................GCTCTAGGTACAACG------ATCC......................................................................................................................................................................................................................................................................................................................................................................................................1940.2510100000000
..........TAATACGTCGTGCTCTAGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510100000000
...............................................................................................................................................................................................................................ACTCCCAGACATTCCGTCACACACT............................................................................................................................................................................................2550.2010100000000
.................................................................................................................................................................................................................................TCCCAGACATTCCGTCACACACTTGTA........................................................................................................................................................................................2750.2010100000000
...........................................................................................................................................................................................................................................TCCGTCACACACTTGTATTTT-------------------------------------------AATCC------------------------............................................................................................................2650.2010000000100
.................................................AAACTCGTCAAGCCATGCACA..............................................................................................................................................................................................................................................................................................................................................................................2150.2010100000000
........................................................................................................................................................................................................................TACAAAAACTCCCAGACATTCCGTCAC.................................................................................................................................................................................................2750.2010100000000
....................................................................................................................................................................................................................................................................................................................................................................CAACTACCGACT-------------------CGATCTCGAA----GCG-----...........................2550.2010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGAA----GCG-----ATTGCTC---------C---AAT....2350.2010100000000
...................................................................................................................................................................................................................................CCAGACATTCCGTCACACACTTGT.........................................................................................................................................................................................2450.2010100000000
........................................................................................................................................................................................................................TACAAAAACTCCCAGACATTCCGTCA..................................................................................................................................................................................................2650.2010100000000
.........................................................................................................................................................................................................................................................................................................................................................................ACCGACT-------------------CGATCTCGAA----GCG-----ATTG.......................2450.2010100000000
.............................................................................................................................................................................................................................AAACTCCCAGACATTCCGTCACACACT............................................................................................................................................................................................2750.2010100000000
.................................................................................................................................................................................................................................TCCCAGACATTCCGTCACACACT............................................................................................................................................................................................2350.2010100000000
......................................................................................AAACCAAACAGTTTGAAAGCAACG......................................................................................................................................................................................................................................................................................................................................2450.2010100000000
................................................................................................................................................................................................................................................................................................................................................................AATTCAACTACCGACT-------------------CGATCTCGAA----G..................................2760.1710100000000
...................................................................................................................................................................................................................................................................................................................................................................TCAACTACCGACT-------------------CGATCTCGAA----G..................................2460.1710100000000
.......................................................................................................................................................................................................CCCG---------GACTTACAAAAACTCCCAGACA..........................................................................................................................................................................................................2670.1410100000000
........................................................................................................................................................................AGTTCCATTA-----C--------------TCCCG---------GACTTA..........................................................................................................................................................................................................................2270.1410100000000
........................................................................................................................................................................................................CCG---------GACTTACAAAAACTCCCAGAC...........................................................................................................................................................................................................2470.1410100000000
...............................................................................................................ACACCATTTAATGGACGTTTCGA---------------------------------CAGT.........................................................................................................................................................................................................................................................................27110.0910100000000
.......................................................................................................AGCAACGAACACCATTTAATGGAC.....................................................................................................................................................................................................................................................................................................................24110.0910100000000
......................................................................................................AAGCAACGAACACCATTTAATGGAC.....................................................................................................................................................................................................................................................................................................................25110.0910100000000
........................................................................................................GCAACGAACACCATTTAATGGAC.....................................................................................................................................................................................................................................................................................................................23110.0910100000000
..........................................................................................................................TGGACGTTTCGA---------------------------------CAGTTCCATTA-----C--------------TCCC..........................................................................................................................................................................................................................................28120.0810100000000
................................AACG------ATCCAAAAAACTCGTCAAGC......................................................................................................................................................................................................................................................................................................................................................................................24140.0710100000000
droPer2
ATAAACC---------GTTGTGCTCTAGGTGCAACG------ATCCAAAAAACTCGTCAAGCCGTGCACAATCGACAGGTGCACGCAAACCAAACAGTTCGAAAGCAACGAACACCATTTAATGGACGTTTCGA---------------------------------CAGTTCCATTA-----C--------------TCCCG---------GACTTACAAAAACTCCCAGACATTCCGTCACACACTTGTATTTT-------------------------------------------AACCC------------------------CAAGTAGGGAAA---------G--AATTCAACTACCGACT-------------------CGATCTCGAAA---GCG-----ATTGCTC---------C---AATATCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGAAA---GCG-----ATTGCTC---------C---AAT....24200.306060000
........................................................................................................................................................................................................CCG---------GACTTACAAAAACTCCCAGACA..........................................................................................................................................................................................................25120.253030000
.................................................................................................................................................................................A-----C--------------TCCCG---------GACTTACAAAA.....................................................................................................................................................................................................................18120.172200000
........................................................................................................................................................................................................CCG---------GACTTACAAAAACTCCCAGA............................................................................................................................................................................................................23120.172020000
....................................................................................................................................................................................................................................................................................................................................................................................................GATCTCGAAA---GCG-----ATTGCTC---------C---AA.....23200.102020000
......................................................................................................................................................................................................TCCCG---------GACTTACAAAAACTCCCAGACA..........................................................................................................................................................................................................27120.081010000
.............................................................................................................................................................................CATTA-----C--------------TCCCG---------GACTTACAAAAA....................................................................................................................................................................................................................23120.081100000
........................................................................................................................................................................................................CCG---------GACTTACAAAAACTCCCAG.............................................................................................................................................................................................................22120.081010000
.................................................AAACTCGTCAAGCCGTGCACAATC...........................................................................................................................................................................................................................................................................................................................................................................24200.051010000
..................................CG------ATCCAAAAAACTCGTCAAGCCG....................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
..................................................AACTCGTCAAGCCGTGCACAATCG..........................................................................................................................................................................................................................................................................................................................................................................24200.051010000
droVir3
ATAGACC---------AAGTTGTGCTAGATGCAGTC------ATGCAACAAACTCTTTGCGGCGTGCACCTCCGAAAAGTGCACGCAGACTATTAATATCGAAGGCGACCAACATAAATTATAAGCTT--CC-----AGT-----------------------------GCTTTAATAGGTATC--------------TACCA---------GACTTTACAGACTTACCAGATGTACCTTTACACCATCGTCTTCA-------------------------------------------AAATACAAATAATCAAGTCGTCAGCCCCCATAGTAAGAGA-----------ATGACACGTTCC---------------------------------------------------------------A---AGTTTCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................TTTAATAGGTATC--------------TACCA---------GAC.............................................................................................................................................................................................................................2111.001000000000000000000000000000000001000000000000000000000000000000
...................TTGTGCTAGATGCAGTC------ATGC......................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000001000000000000000000000000000000000
.................AGTTGTGCTAGATGCAGTC------AT........................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GTACCTTTACACCATCGTCTT......................................................................................................................................................................................2120.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
ATAAGCC---------TTCGTGCATGAAATGCAACA--AGC-ATTCAAAAAACTTGTCAGCCCGTGCACCGTCGACCAGTGCACGCAAACAAATGAAGTCGACATCAACCAACACATAGATTTTC------------AATCTGTTGACTATACTAACGACCCAATTACGACCTCACAA-----CTTTATGATGCCCA---------------------------TTCCGAAACAA-------------------------------------------------------------------------------------TACACACACAAATAAGCTC----------------------C-------------------AAATCTCGCTCTCAACT---ACGTC-------------------G---TATCTCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................TTCCGAAACAA-------------------------------------------------------------------------------------TACACACACAAATAAGC...................................................................................................2827.50151400010
........................................................................................................TCAACCAACACATAGATTTTC------------AATCTGT....................................................................................................................................................................................................................................................................................................2813.003200010
.....................................................................................................................................................ATACTAACGACCCAATTACGACCTC......................................................................................................................................................................................................................................................................2512.002100010
.....................................................................................................................................................................................................................................AAACAA-------------------------------------------------------------------------------------TACACACACAAATAAGCTC----------------------C-------------------.......................................................2621.503100020
.....................................................................................................................................................ATACTAACGACCCAATTACGACCT.......................................................................................................................................................................................................................................................................2411.001000010
.................................................AAACTTGTCAGCCCGTGCACCGT............................................................................................................................................................................................................................................................................................................................................................................2331.003200010
.................................................AAACTTGTCAGCCCGTGCACCGTCG..........................................................................................................................................................................................................................................................................................................................................................................2531.003300000
.........................................................................................................................................................TAACGACCCAATTACGACCTCACA...................................................................................................................................................................................................................................................................2411.001100000
................................................................................................................................................................................................................................TTCCGAAACAA-------------------------------------------------------------------------------------TACACACACAAATAAG....................................................................................................2721.002200000
.....................................................................................................................................................ATACTAACGACCCAATTACGACC........................................................................................................................................................................................................................................................................2311.001100000
..............................................................................................................AACACATAGATTTTC------------AATCTGTT...................................................................................................................................................................................................................................................................................................2311.001100000
.................................................AAACTTGTCAGCCCGTGCACCGTCGAC........................................................................................................................................................................................................................................................................................................................................................................2731.003300000
.................................................................................................................................................................................................................................................................................................................................................TC----------------------C-------------------AAATCTCGCTCTCAACT---ACGTC-------------------G---TA.....2821.002100010
.................................................AAACTTGTCAGCCCGTGCACCGTCGACC.......................................................................................................................................................................................................................................................................................................................................................................2831.003200001
.................................................AAACTTGTCAGCCCGTGCACCGTCGA.........................................................................................................................................................................................................................................................................................................................................................................2630.672200000
.................................................AAACTTGTCAGCCCGTGCACC..............................................................................................................................................................................................................................................................................................................................................................................2130.672100010
.................................................AAACTTGTCAGCCCGTGCACCG.............................................................................................................................................................................................................................................................................................................................................................................2230.672200000
................................................................................................................................................................................................................................TTCCGAAACAA-------------------------------------------------------------------------------------TACACACACAAAT.......................................................................................................2420.501100000
.....................................................................................................................................................................TACGACCTCACAA-----CTTTATGATGCC.................................................................................................................................................................................................................................................2520.501100000
................................................................................................................................................................CCAATTACGACCTCACAA-----CTTTATGA.....................................................................................................................................................................................................................................................2620.501100000
.................................................................................................................................................................................................CCCA---------------------------TTCCGAAACAA-------------------------------------------------------------------------------------TACACACACAA.........................................................................................................2620.501100000
................................................................................................................................................................CCAATTACGACCTCACAA-----CTTTATG......................................................................................................................................................................................................................................................2520.501100000
................................................................................................................................................................................................................................TTCCGAAACAA-------------------------------------------------------------------------------------TACACACACAAATAAGCT..................................................................................................2920.501100000
...................................A--AGC-ATTCAAAAAACTTGTCAGC.......................................................................................................................................................................................................................................................................................................................................................................................2320.501000010
................................................................................................................................................................................................................................TTCCGAAACAA-------------------------------------------------------------------------------------TACACACACAAATAAA....................................................................................................2720.501100000
.................................................................................................................................................................................................................................................................................................................................................TC----------------------C-------------------AAATCTCGCTCTCAACT---ACGTC-------------------G---.......2620.501100000
..................................................................................................................................................................................................................................................................................................................................................C----------------------C-------------------AAATCTCGCTCTCAACT---ACGTC-------------------G---.......2520.501100000
.................................................................................................................................................................................................................................................................................................................................................TC----------------------C-------------------AAATCTCGCTCTCAACT---ACGTC-------------------G---T......2720.501100000
.......................................................................................................................................................................................................................................ACAA-------------------------------------------------------------------------------------TACACACACAAATAAGCTC----------------------C-------------------.......................................................2420.501100000
...................................................................................................................................................................................................CA---------------------------TTCCGAAACAA-------------------------------------------------------------------------------------TACACACACAA.........................................................................................................2420.501100000
.................................................................................................................................................................................................CCCA---------------------------TTCCGAAACAA-------------------------------------------------------------------------------------TACACACAC...........................................................................................................2420.501100000
.................................................AAACTTGTCAGCCCGTGCAC...............................................................................................................................................................................................................................................................................................................................................................................2030.331000010
................................................................................................................................................................CCAATTACGACCTCACAA-----CT...........................................................................................................................................................................................................................................................2030.331100000
...........................................TTCAAAAAACTTGTCAGCCCGTGCAC...............................................................................................................................................................................................................................................................................................................................................................................2630.331100000
.....................................................TTGTCAGCCCGTGCACCGC............................................................................................................................................................................................................................................................................................................................................................................1930.331000010
..................................................AACTTGTCAGCCCGTGCACC..............................................................................................................................................................................................................................................................................................................................................................................2030.331100000
..................................................AACTTGTCAGCCCGTGCACCGTCGA.........................................................................................................................................................................................................................................................................................................................................................................2530.331100000
............................................................................................ATGAAGTCGACATCAACCAACACATAGA............................................................................................................................................................................................................................................................................................................................2830.331100000
.................................................AAACTTGTCAGCCCGTGCACCGTC...........................................................................................................................................................................................................................................................................................................................................................................2430.331100000
..................................................................................................TCGACATCAACCAACACATAGATT..........................................................................................................................................................................................................................................................................................................................2430.331100000
.................................................................................CACGCAAACAAATGAAGTCGACATC..........................................................................................................................................................................................................................................................................................................................................2530.331100000
.....................................................TTGTCAGCCCGTGCACCGTCGACCAGTG...................................................................................................................................................................................................................................................................................................................................................................2830.331100000
...............................................................................TGCACGCAAACAAATGAAGTCGACATC..........................................................................................................................................................................................................................................................................................................................................2730.331100000
.............................................................................................TGAAGTCGACATCAACCAACACA................................................................................................................................................................................................................................................................................................................................2340.251100000
......................................................................................AAACAAATGAAGTCGACATCAACCAAC...................................................................................................................................................................................................................................................................................................................................2740.251000010
.........................................................................GACCAGTGCACGCAAACAAA.......................................................................................................................................................................................................................................................................................................................................................2040.251100000
droGri2
ACAAGCC---------GTAATGTGCCAAGTGCAATG------CTTAAAAA----CGAAATGTCACGAAATGTCAACCAGTGCACGCAAT-------TTTCGAAGGGAACGAACACCGAGTAACTTAT-----GA---------------------------------AATGTTCAGTT-----CACTCGACCAACTAC-----CGGAAAT--GACTTTAC-----TCGCTAGTAGTCCTTTACCTAATTGTT---------------------------------------------------------------------CAAAAA-----------ACTTGACCAAAC-------AACTACCTGATGTTATTAAAATC-AAAACCCA-----------------------TAGT---------C---AATAACGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
ATAAACC---------TACATGTCGGACTTGTAACCCAAACGCTCAAAAAAACTATCAAGGGCGTGCACCACAGAAAAGTGCACGCAAACAGTTAATCAGCATAGCGACCAATACAGAGTAACAC--TTTCCGA---------------------------------CGACCCCATTT-----CTGTAGGCCCCCTAC-----CGCAACCTA----------------AATGTATACCATTCCCTATATCTA---------------------------------------------------------------------AGATAG-----------ACGTTAAGAGAA-------AACGGTCTACTGG-------------------------------TCGTCGAG-AAGCTTTTA------A---AAAACCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................TACAGAGTAACAC--TTTCCGA---------------------------------CGACCCC......................................................................................................................................................................................................................................................................27140.365410000
................................................................................................................TACAGAGTAACAC--TTTCCGA---------------------------------CGACCC.......................................................................................................................................................................................................................................................................26140.294310000
.............................................................................................................................................................................CATTT-----CTGTAGGCCCCCTAC-----CGCAACC..................................................................................................................................................................................................................................27130.233300000
......................................AACGCTCAAAAAAACTATCAAGGGC.....................................................................................................................................................................................................................................................................................................................................................................................25200.204040000
.TAAACC---------TACATGTCGGACTTGTAACCCA..............................................................................................................................................................................................................................................................................................................................................................................................................28180.173300000
.............................................................................................................................................................................CATTT-----CTGTAGGCCCCCTAC-----CGC......................................................................................................................................................................................................................................23130.152110000
................................................................................................................TACAGAGTAACAC--TTTCCGA---------------------------------CGA..........................................................................................................................................................................................................................................................................23140.142100010
...............................................................................................................................................................................TTT-----CTGTAGGCCCCCTAC-----CGCAACC..................................................................................................................................................................................................................................25140.142200000
................................................................................................................TACAGAGTAACAC--TTTCCGA---------------------------------CGACC........................................................................................................................................................................................................................................................................25140.142110000
.................................................AAACTATCAAGGGCGTGCACCACAGA.........................................................................................................................................................................................................................................................................................................................................................................26180.112200000
......................................AACGCTCAAAAAAACTATCAAGGG......................................................................................................................................................................................................................................................................................................................................................................................24200.102110000
.......................CGGACTTGTAACCCAAACGCTCA......................................................................................................................................................................................................................................................................................................................................................................................................23200.102200000
..............................................................................................................................................................................ATTT-----CTGTAGGCCCCCTAC-----CGCAACC..................................................................................................................................................................................................................................26130.081010000
...........................................................................................................................................................................CCCATTT-----CTGTAGGCCCCCTAC-----CGCAAC...................................................................................................................................................................................................................................28130.081100000
.............................................................................................................................................................................CATTT-----CTGTAGGCCCCCTAC-----CGCAAC...................................................................................................................................................................................................................................26130.081010000
...........................................................................................................................................................................CCCATTT-----CTGTAGGCCCCCTAC-----CGCAACC..................................................................................................................................................................................................................................29130.081100000
................................................................................................................TACAGAGTAACAC--TTTCCGA---------------------------------CGAC.........................................................................................................................................................................................................................................................................24140.071100000
............................................................................................................CCAATACAGAGTAACAC--TTTCCGA---------------------------------CGA..........................................................................................................................................................................................................................................................................27140.071100000
.................................................................................................................................................................................T-----CTGTAGGCCCCCTAC-----CGCAACCTA----------------AATG............................................................................................................................................................................................................29140.071100000
..................................................................................................................CAGAGTAACAC--TTTCCGA---------------------------------CGACC........................................................................................................................................................................................................................................................................23140.071100000
.................................................................................................................................................................................T-----CTGTAGGCCCCCTAC-----CGCAACCTA----------------AA..............................................................................................................................................................................................................27140.071100000
...............................................................................................................................................................................TTT-----CTGTAGGCCCCCTAC-----CGCAACCTA----------------................................................................................................................................................................................................................27140.071100000
................................................................................................................................................................................TT-----CTGTAGGCCCCCTAC-----CGCAACC..................................................................................................................................................................................................................................24140.071010000
...............................................................................................................................................................................TTT-----CTGTAGGCCCCCTAC-----CGCAACCT.................................................................................................................................................................................................................................26140.071010000
......................................................................................................................................................................................................................................................................................................................................G-----------ACGTTAAGAGAA-------AACGGTCTACTGG-------------------------------...................................26150.071010000
..............................................................................................................................................................................................................................................ATTCCCTATATCTA---------------------------------------------------------------------AGATAG-----------ACGTT.............................................................................................25150.071100000
..........................................................................................................................................................................................................................................................TA---------------------------------------------------------------------AGATAG-----------ACGTTAAGAGAA-------AACGGT.........................................................................26150.071001000
...................................................................................................................................................................................................................................................................................................................................................CGTTAAGAGAA-------AACGGTCTACTG...................................................................23150.071100000
..............................................................................................................................................................................................................................................ATTCCCTATATCTA---------------------------------------------------------------------AGATAG-----------ACGTTA............................................................................................26150.071100000
......................................................................................................................................................................................................................................................................................................................................................TAAGAGAA-------AACGGTCTACTGG-------------------------------TCGTC..............................26150.071010000
.......................CGGACTTGTAACCCAAACGCTCAAAAA..................................................................................................................................................................................................................................................................................................................................................................................................27180.061100000
.................................................AAACTATCAAGGGCGTGCACCA.............................................................................................................................................................................................................................................................................................................................................................................22180.061100000
.................................................AAACTATCAAGGGCGTGCACC..............................................................................................................................................................................................................................................................................................................................................................................21180.061100000
............................................................................................................................................................................................................................................................................................................................................................AA-------AACGGTCTACTGG-------------------------------TCGTCGAG-AAGC......................27190.051100000
...........................................................................................................................................................................................................................................................................................................................................................GAA-------AACGGTCTACTGG-------------------------------TCGTCGAG-AAGC......................28190.051100000
.....................................................................................................................................................................................................................................................................................................................................................................AACGGTCTACTGG-------------------------------TCGTCGAG-AAGC......................25190.051100000
..........................................................................................................................................................................................................................................................................................................................................................................TCTACTGG-------------------------------TCGTCGAG-AAGCTTTTA------A---A......27190.051100000
............................................................................................................................................................................................................................................................................................................................................................................TACTGG-------------------------------TCGTCGAG-AAGCTTTTA------A---AAA....27190.051100000
.............................................AAAAAAACTATCAAGGGCGTGC.................................................................................................................................................................................................................................................................................................................................................................................22190.051010000
............................................................................................................................................................................................................................................................................................................................................................................TACTGG-------------------------------TCGTCGAG-AAGCTTTTA------A---A......25190.051100000
......................................................................................................................................................................................................................................TGTATACCATTCCCTATATCTA---------------------------------------------------------------------AGATA..............................................................................................................27200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................G-------------------------------TCGTCGAG-AAGCTTTTA------A---A......20200.051100000
.......................................ACGCTCAAAAAAACTATCAAGGG......................................................................................................................................................................................................................................................................................................................................................................................23200.051001000
................................................................................................................................................................................................................CCTA----------------AATGTATACCATTCCCTATATC..........................................................................................................................................................................................26200.051010000
..................CATGTCGGACTTGTAACCC...............................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
..................................................................................................................................................................................................................TA----------------AATGTATACCATTCCCTATATCTA---------------------------------------------------------------------AGA................................................................................................................29200.051100000
......................................AACGCTCAAAAAAACTATCAAGGC......................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
..................CATGTCGGACTTGTAACCCA..............................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
droBip1
ATAAACC---------TACATGTCGGACTTGTA-----------------AACTACCAAGGGCGTGCACCACAGAAAAGTGCACGCAAACAGATAATCAGCATAGCGACCAATACAGAGTAACAC--TTTCCGA---------------------------------CGACCTCACGT-----CTCTAGGCTCCCAAC-----CGCAACCTA----------------AATGTATACCATTTCCTATATGTA---------------------------------------------------------------------AGATAG-----------ACGTTAAGAGAA-------AACGGTCTACTGG-------------------------------TCGTCGAG-AAGATTTAAAAAAAAC---AATGTAASizeHit CountTotal NormTotal
No Reads
droKik1
CTACAA-------AACGGCGTGCCCAAAATGTAGTC------AAGCAAAAAACTTCTCAGGCCGTGCACCACCGAAAGGTGCACGCAGACAAGTGGCGTCGAAAGCGACGAATACAGATTAAAGTCCACAATCA---------------------------------TATCTTCATCAAGTA----------------TCCCC---------GACTTTTCACATATCCCTGACATTCCTTTACACAAACGTTCTTTCAAGATAACAACT----------------------------------------------AACATTAGTCGCCCAAATAAAAGA-----------ACAGTTCGGTCAAAGTT-------------A------CGAATC--AA-ACA--------ATTCTAC---------C---ATCAACGSizeHit CountTotal NormTotal
No Reads
droFic1
CCACAA-------GTCGTCATGCCCAAAATGTAGTC------AGTCAAAAAACTACTCAGCCCGTGTACCACAGAAAGGTGCACGCAGACAAGTGGCGTCGAAAGCGACGAATACAGATTAAAGTCCACCATTA---------------------------------TATCTCCATCAAGTA----------------TCCCA---------GACTTTTCACATATCCCTGACATTCCTTTACACAAACGTTCTTTCAGAGAAACACCT----------------------------------------------ATTATTAGACACACAAATAAAAGA-----------AAAGTTCGATCAAAGTT-------------A------CGAATC--AA-AGA--------ATTCTAC---------CATAAATGTAGSizeHit CountTotal NormTotal
No Reads
droEle1
ATAAACC---------ATCCTGTACGAAATGTACTG------GCTCAAAAAACTTAGTAGATCGTGCACCAGTGGCAAGTGCACGGAAGAAACAAACAGCGAATACGACTCAGATGGATTTGT--------------AG----------------------------------------------------------------AGCCACCTCAATCTACAAAAACC------------------------ATTTTACCAGACAAAACCACAAACCTGCCAGTACCAAAACTTTTGCATTCACC----------------------AC--CAGAAGAAAAA---------GATTGT--------GCTT-------------G------CGAATC--AG-TGA--------AT------------------ACTATAGSizeHit CountTotal NormTotal
No Reads
droRho1
ATAAGCC---------CAATTGTAGAAAGTGTGGTTCAAATGCTTCAAAAAACTGCCAAGCTCGGGCACCGCAGAAAGGTGCACGCAAACATATGGTCTGCAAAGCGACCAATACTAGTCAAATTAGTCGGGCCCGCAGA-----------------------------GCGCATATATCAACC--------------TACTG---------AACTTTC------------------TTACCCAGAATTATCTTTT--AATTACCAATT------------------------TGCG--TTACC---------------------AG-----------AAGTACATAAAA-------ACCGTTCAAAATG-------------------------------TCGTGGAA-TCGCTT---------T---AAAAAAASizeHit CountTotal NormTotal
No Reads
droTak1
ATAAGCC---------GAATTGCAGCAATTGTAACA------ACTCAAAAAACCCTCGAGGGCGTGCACTGGGGACCAATGCACGCAAACGGACGATCTCGAGAGCAACCAATACAGATTAAGCGATCCTTGCT---------------------------------CGGAATCTGTA-----C--------------CACCG---------AACTTTCCATATTCAAAGAATTTACCAACACACTCCAATTTTCT-------------------------------------------ACACC------------------------A------------------------GACCGGTCAAACTC-------------G------AAAACA--GAA---GCGTAGAA-TAG----------------CTTATAGSizeHit CountTotal NormTotal
No Reads
droYak3
ACAAACC---------CAGCTGTAGCAGTTGCAATG------GTTCAAAAAACTTAGAAGGGCGTGCACTGTTGAACAATGAACGCAAACGGATGGTTTCAAAAGCAACCAACACCAAGTAACGGACGGTTGCT---------------------------------CAGTTCCTTTA-----C--------------CACCT---------GACTTTCAAAATCAGCCAACTTTACCTTTGCACCAAAAGGTGCA--------CAAAC--------------------------------------AAGAAGAATTTGTCAGATCC-----------AAACGGAGTCAA-------ATC-GAAA-T-------------A------GGGC----------TCGTAGAA-TTG----------------ACTATAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................AACCAACACCAAGTAACGGAC.....................................................................................................................................................................................................................................................................................................................2111.00110000000000

Generated: 05/18/2015 at 04:24 AM