ID:

dps_2365

 Coordinate:

Unknown_singleton_3382:2939-3089 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.4 -9.9

Flybase annnotation

CDS [Dpse\GA25159-cds]; exon [dpse_GLEANR_16488:3]; intron [Dpse\GA25159-in]

No Repeatable elements found

mature
  1. dps_3592  XR_group3a:675548-675568 +
  2. dps_3596  XR_group3a:676326-676346 +
  3. dps_2362  Unknown_singleton_3382:611-631 -
  4. dps_3632  Unknown_singleton_3382:1781-1801 -
  5. dps_2365  Unknown_singleton_3382:2951-2971 -
  6. dps_2366  Unknown_singleton_3382:4709-4729 -
  7. dps_3642  Unknown_singleton_3382:5879-5899 -
star
  1. dps_3596  XR_group3a:676297-676317 +
  2. dps_2365  Unknown_singleton_3382:2980-3000 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGTGTGACAGCAATGTGTTCGACATTACCAAGAGTCGCGTACAGATAATGCTGATCCGTGGCATCCACTCACAACGAAGTGCTGCCACCAGGCCAGGCCCATCATCGAGGGCCGCCCATACAAGGCCGACTGATAGCTGTCGGCGATCAACATTATATGTGCGGGGCTCTTGGGCATGTCGTCCTCATTTTTGCCACACAGATGGTAGGGTCTCCAGTTCTGCTACTGTTCTCGCATGTACGAGAATGTAC
*******************************************************************************************************************************************..((((((.........((((.((((...)))).))))))))))......************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 V112
male body		 M040
female body
 GSM444067
head
 M062
head
 M022
male body		 SRR902012
CNS imaginal disc
.............TGTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 0 7 986.86 6908 5487 1106 190 99 14 7 5
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGG......................................... 21 0 7 451.14 3158 1215 1138 553 230 22 0 0
.............TGTGTTCGACATTACCAAGA.......................................................................................................................................................................................................................... 20 0 7 187.00 1309 1203 54 35 13 2 0 2
.............TGTGTTCGACATTACCAAG........................................................................................................................................................................................................................... 19 0 7 98.14 687 605 6 41 17 2 14 2
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGG.......................................... 20 0 7 30.57 214 74 20 109 5 6 0 0
.............TGTGTTCGACATTACCAAGAA......................................................................................................................................................................................................................... 21 1 7 25.86 181 160 5 12 1 3 0 0
..................................TCGCGTACAGATAATGCTGA..................................................................................................................................................................................................... 20 0 5 16.60 83 39 36 3 2 0 3 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATT.............................................................. 21 0 7 10.71 75 61 6 6 1 0 1 0
.......................................................................................................................................................ATTATATGTGCGGGGCTCTTG............................................................................... 21 0 7 10.14 71 38 31 1 1 0 0 0
..................................TCGCGTACAGATAATGCTGAT.................................................................................................................................................................................................... 21 0 5 8.80 44 39 2 2 0 0 1 0
.............TGTGTTCGACATTACCAAGAGA........................................................................................................................................................................................................................ 22 1 7 8.71 61 53 7 1 0 0 0 0
.............TGTGTTCGACATTACCAAGAGT........................................................................................................................................................................................................................ 22 0 7 7.43 52 20 24 3 4 1 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGA........................................ 22 1 7 6.86 48 22 19 5 2 0 0 0
.............TGTGTTCGACATTACCAAGAGTT....................................................................................................................................................................................................................... 23 1 7 6.71 47 2 40 2 2 1 0 0
..............................................................................................................................................................................................TTGCCACACAGATGGTAGGG......................................... 20 0 7 6.29 44 1 2 38 3 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGT........................................ 22 0 7 5.71 40 16 19 3 2 0 0 0
..................................................................................................................................................TCAACATTATATGTGCGGGG..................................................................................... 20 0 2 5.50 11 6 2 2 0 1 0 0
..................................TCGCGTACAGATAATGCTGATC................................................................................................................................................................................................... 22 0 5 5.40 27 12 11 2 0 0 2 0
..................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTTC.................... 21 0 6 4.83 29 23 2 2 0 1 1 0
..............GTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 20 0 7 4.00 28 3 10 15 0 0 0 0
.............TGTGTTCGACATTACCAAGT.......................................................................................................................................................................................................................... 20 1 7 3.29 23 9 8 3 3 0 0 0
........................................................................................................................................................TTATATGTGCGGGGCTCTTGG.............................................................................. 21 0 7 2.86 20 18 2 0 0 0 0 0
....TGACAGCAATGTGTTCGACAT.................................................................................................................................................................................................................................. 21 0 7 2.86 20 2 13 3 2 0 0 0
.............TGTGTTCGACATTACCAAGAAA........................................................................................................................................................................................................................ 22 2 7 2.71 19 17 2 0 0 0 0 0
......................CATTACCAAGAGTCGCGTAC................................................................................................................................................................................................................. 20 0 7 2.57 18 8 8 0 0 0 2 0
.................................................................................................................................................................................................CCACACAGATGGTAGGGTC....................................... 19 0 7 2.43 17 0 15 1 0 0 1 0
.................................................................................................................................................................................................CCACACAGATGGTAGGGTCTC..................................... 21 0 7 2.29 16 2 9 2 1 0 2 0
........................................................................................................................................................TTATATGTGCGGGGCTCTTG............................................................................... 20 0 7 2.29 16 6 10 0 0 0 0 0
.............TGTGTTCGACATTACCAAGAGAA....................................................................................................................................................................................................................... 23 2 7 2.14 15 10 3 1 1 0 0 0
.............TGTGTTCGACATTACCAAGAGTC....................................................................................................................................................................................................................... 23 0 7 2.00 14 7 6 1 0 0 0 0
............................................................................................................................................................................................ATTTGCCACACAGATGGTAGGG......................................... 22 1 7 2.00 14 13 0 1 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAG........................................... 19 0 7 1.86 13 7 0 6 0 0 0 0
.........................................................................................................................................................TATATGTGCGGGGCTCTTGGG............................................................................. 21 0 7 1.71 12 10 2 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGT......................................... 21 1 7 1.71 12 10 2 0 0 0 0 0
.............TGTGTTCGACATTATTAAGAG......................................................................................................................................................................................................................... 21 2 7 1.71 12 12 0 0 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTC............................................................. 22 1 7 1.57 11 9 0 1 1 0 0 0
..........................................................................................................................................................ATATGTGCGGGGCTCTTGG.............................................................................. 19 0 7 1.57 11 8 3 0 0 0 0 0
.........................................................................................................................................................TATATGTGCGGGGCTCTTGG.............................................................................. 20 0 7 1.57 11 9 2 0 0 0 0 0
.............TGTGTTCGACATTACCAAGAGTTTGG.................................................................................................................................................................................................................... 26 3 7 1.57 11 11 0 0 0 0 0 0
..................................................................................................................................................TCAACATTATATGTGCGGGGC.................................................................................... 21 0 2 1.50 3 1 0 2 0 0 0 0
........................................................................................................................................................TTATATGTGCGGGGCTCTTGGG............................................................................. 22 0 7 1.43 10 7 2 1 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGA......................................... 21 1 7 1.43 10 6 1 2 1 0 0 0
............CTGTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 22 1 7 1.29 9 5 1 3 0 0 0 0
............................................................................................................................................................................................TTTTGCCACACAGATGGTAGG.......................................... 21 0 7 1.14 8 5 0 3 0 0 0 0
.................................................................................................................................................................................................CCACACAGATGGTAGGGTCT...................................... 20 0 7 1.14 8 0 7 0 0 0 1 0
.............TGTGTTCGACATTACCAAGGG......................................................................................................................................................................................................................... 21 1 7 1.00 7 6 1 0 0 0 0 0
......................CATTACCAAGAGTCGCGTACA................................................................................................................................................................................................................ 21 0 7 1.00 7 5 2 0 0 0 0 0
..................................TCGCGTACAGATAATGCTGATT................................................................................................................................................................................................... 22 1 5 1.00 5 4 0 1 0 0 0 0
.............TGCGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 1.00 7 3 3 0 0 1 0 0
..................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTT..................... 20 0 6 1.00 6 6 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTT....................................... 23 1 7 0.86 6 2 4 0 0 0 0 0
.............TGTGTTCAACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.86 6 5 1 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGAA....................................... 23 2 7 0.86 6 1 4 0 1 0 0 0
.............TGTGTTCGACATCACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.86 6 6 0 0 0 0 0 0
.............TTTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.86 6 3 0 1 0 2 0 0
........................TTACCAAGAGTCGCGTACAG............................................................................................................................................................................................................... 20 0 5 0.80 4 2 1 0 0 0 1 0
...............................ATCTCGCGTACAGATAATGCTGAT.................................................................................................................................................................................................... 24 3 5 0.80 4 4 0 0 0 0 0 0
..............................AGAGTCGCGTACAGATAATG......................................................................................................................................................................................................... 20 0 5 0.80 4 1 1 0 1 0 1 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTT............................................................. 22 0 7 0.71 5 5 0 0 0 0 0 0
.............................................................................................................................................................................................TGTGCCACACAGATGGTAGGG......................................... 21 1 7 0.71 5 0 0 0 1 4 0 0
.............TGTGTTCGACATTACCAAGAC......................................................................................................................................................................................................................... 21 1 7 0.71 5 2 1 0 0 2 0 0
.............TGTGTTCGACATTACCAAGAT......................................................................................................................................................................................................................... 21 1 7 0.71 5 5 0 0 0 0 0 0
.......................................................................................................................................................ATTATATGTGCGGGGCTCTT................................................................................ 20 0 7 0.71 5 3 1 0 0 1 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGAAGGG......................................... 21 1 7 0.71 5 5 0 0 0 0 0 0
.............TCTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.71 5 2 3 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGTTAGGG......................................... 21 1 7 0.71 5 0 2 2 1 0 0 0
.............TGTGTTCGACATTACCAAA........................................................................................................................................................................................................................... 19 1 8 0.63 5 4 0 0 1 0 0 0
........................TTACCAAGAGTCGCGTACAGA.............................................................................................................................................................................................................. 21 0 5 0.60 3 2 0 0 0 0 1 0
.........................TACCAAGAGTCGCGTACAGATA............................................................................................................................................................................................................ 22 0 5 0.60 3 0 3 0 0 0 0 0
.............TATGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.57 4 3 0 0 1 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTC................................................................. 18 0 7 0.57 4 1 0 0 0 0 3 0
.............TGTGTTTGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.57 4 3 1 0 0 0 0 0
.............................................................................................................................................................................................TTTCCCACACAGATGGTAGGG......................................... 21 1 7 0.57 4 0 3 0 1 0 0 0
...............TGTTCGACATTACCAAGAGTC....................................................................................................................................................................................................................... 21 0 7 0.57 4 0 4 0 0 0 0 0
............ATGTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 22 0 7 0.57 4 4 0 0 0 0 0 0
..................................................................................................................................................................GGGGCTCTTGGGCATGTCG...................................................................... 19 0 7 0.57 4 2 2 0 0 0 0 0
..............................................................................................................................................................................................TTGCCACACAGATGGTAGG.......................................... 19 0 7 0.57 4 0 0 4 0 0 0 0
.............TGTGTTCGACATTACCAAGTT......................................................................................................................................................................................................................... 21 2 7 0.57 4 3 1 0 0 0 0 0
..................................................................................................................................................................GGGGCTCTTGGGCATGTCGTC.................................................................... 21 0 7 0.57 4 1 3 0 0 0 0 0
.............................................................................................................................................................................................TTAGCCACACAGATGGTAGGG......................................... 21 1 7 0.57 4 1 0 0 3 0 0 0
.............TGTGTTCGACATTATCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.57 4 4 0 0 0 0 0 0
...........................................................................................................................................................................................TTTTTGCCACACAGATGGTAGG.......................................... 22 0 7 0.57 4 1 1 2 0 0 0 0
.............TGTGTTCGACATTACCAAGAGTA....................................................................................................................................................................................................................... 23 1 7 0.57 4 3 1 0 0 0 0 0
.............CGTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.57 4 3 1 0 0 0 0 0
.............TGTGTTCGACATTACCAA............................................................................................................................................................................................................................ 18 0 7 0.57 4 4 0 0 0 0 0 0
..........................................................................................................................................................................TGGGCATGTCGTCCTCATTTT............................................................ 21 0 7 0.57 4 4 0 0 0 0 0 0
...............TGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 19 0 7 0.57 4 3 1 0 0 0 0 0
.............TGTGCTCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.57 4 1 3 0 0 0 0 0
...........................................................................................................................................TCGGCGATCAACATTATATGT........................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................................................................AACATTATATGTGCGGG...................................................................................... 17 0 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................................................................AACATTATATGTGCGGGGC.................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................................................................AACATTATATGTGCGGGGCTC.................................................................................. 21 0 2 0.50 1 0 0 0 0 0 1 0
..................................................................................................................................................TCAACATTATATGTGCGG....................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................................................................AACATTATATGTGCGGGGCTT.................................................................................. 21 1 2 0.50 1 0 1 0 0 0 0 0
..................................................................................................................................................TCAACATTATATGTGCGGG...................................................................................... 19 0 2 0.50 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................TTTCCACACAGATGGTAGGG......................................... 20 1 8 0.50 4 1 3 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTGGGG......................................... 21 1 7 0.43 3 0 2 1 0 0 0 0
.............................................................................................................................................................................................TTTGACACACAGATGGTAGGG......................................... 21 1 7 0.43 3 1 0 0 2 0 0 0
..............................................................................................................................................................................................TTGCCACACAGATGGTAGGGTC....................................... 22 0 7 0.43 3 0 2 1 0 0 0 0
.............TGTGTTCGACATTACCAAGAGTCGCG.................................................................................................................................................................................................................... 26 0 7 0.43 3 0 2 0 1 0 0 0
.............TGTGTTCGACATTACCATGAG......................................................................................................................................................................................................................... 21 1 7 0.43 3 2 1 0 0 0 0 0
............................................................................................................................................................................................CTTTGCCACACAGATGGTAGGG......................................... 22 1 7 0.43 3 1 0 2 0 0 0 0
....TGACAGCAATGTGTTCGACA................................................................................................................................................................................................................................... 20 0 7 0.43 3 0 2 0 1 0 0 0
..........................................................................................................................................................................TGGGCATGTCGTCCTCATTTTT........................................................... 22 0 7 0.43 3 3 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGAA........................................ 22 2 7 0.43 3 3 0 0 0 0 0 0
...........................................................................................................................................................TATGTGCGGGGCTCTTGGGC............................................................................ 20 0 7 0.43 3 3 0 0 0 0 0 0
........................................................................................................................................................TTATATGTGCGGGGCTCTT................................................................................ 19 0 7 0.43 3 2 1 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATTGTAGGG......................................... 21 1 7 0.43 3 3 0 0 0 0 0 0
.................................................................................................................................................................................................CCACACAGATGGTAGGGTCTT..................................... 21 1 7 0.43 3 0 2 0 0 0 1 0
.............TGTGTTCGACATTACCAAGAGTTT...................................................................................................................................................................................................................... 24 2 7 0.43 3 0 3 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGC........................................ 22 1 7 0.43 3 1 1 1 0 0 0 0
...........................................................................................................................................................TATGTGCGGGGCTCTTGGG............................................................................. 19 0 7 0.43 3 1 2 0 0 0 0 0
...................CGACATTACCAAGAGTCGCG.................................................................................................................................................................................................................... 20 0 7 0.43 3 0 2 1 0 0 0 0
..........................................................................................................................................................ATATGTGCGGGGCTCTTGGG............................................................................. 20 0 7 0.43 3 3 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTC....................................... 23 0 7 0.43 3 0 2 1 0 0 0 0
.............................................................................................................................................................................................TTTGCTACACAGATGGTAGGG......................................... 21 1 7 0.43 3 0 3 0 0 0 0 0
............................................................................................................................................................................................TTTTGCCACACAGATGGTAGGG......................................... 22 0 7 0.43 3 1 1 1 0 0 0 0
..................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTTT.................... 21 1 7 0.43 3 3 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGCAGGG......................................... 21 1 7 0.43 3 0 2 0 1 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGGTGGTAGGG......................................... 21 1 7 0.43 3 0 1 0 1 1 0 0
..........................................................................................................................................................ATATGTGCGGGGCTCTTGGGC............................................................................ 21 0 7 0.43 3 3 0 0 0 0 0 0
.............TGTGTTCGACATTACCAGGAG......................................................................................................................................................................................................................... 21 1 7 0.43 3 2 0 1 0 0 0 0
.........................TACCAAGAGTCGCGTACAGAT............................................................................................................................................................................................................. 21 0 5 0.40 2 0 2 0 0 0 0 0
..................................TCGCGTACAGATAATGCTG...................................................................................................................................................................................................... 19 0 5 0.40 2 2 0 0 0 0 0 0
..................................TCGCGTACAGATAATGCTGATTCTC................................................................................................................................................................................................ 25 3 5 0.40 2 2 0 0 0 0 0 0
.............TGTGTTCGACATTACC.............................................................................................................................................................................................................................. 16 0 8 0.38 3 3 0 0 0 0 0 0
...............................................................................................................................................................................................TGCCACACAGATGGTAGGGTC....................................... 21 0 7 0.29 2 0 1 0 1 0 0 0
.......................................................................................................................................................ATTATATGTGCGGGGCTCTTA............................................................................... 21 1 7 0.29 2 1 0 1 0 0 0 0
.......................................................................................................................................................ATTATATGTGCGGGGCTC.................................................................................. 18 0 7 0.29 2 0 0 0 0 0 2 0
.............................................................................................................................................................................................TTTGTCACACAGATGGTAGGG......................................... 21 1 7 0.29 2 1 1 0 0 0 0 0
.......................................................................................................................................................ATTATATGTGCGGGGCTCTTT............................................................................... 21 1 7 0.29 2 1 1 0 0 0 0 0
.............................................................................................................................................................................................TCTGCCACACAGATGGTAGGG......................................... 21 1 7 0.29 2 0 2 0 0 0 0 0
.............TGTGTTCGACATTACCAAGAGTGG...................................................................................................................................................................................................................... 24 1 7 0.29 2 2 0 0 0 0 0 0
.................................................................................................................................................................................................CCACACAGATGGTAGGGTCTCTC................................... 23 2 7 0.29 2 2 0 0 0 0 0 0
..................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTTTTT.................. 23 2 7 0.29 2 2 0 0 0 0 0 0
..................................................................................................................................................................................................................TTTCCAGTTCTGCTACTGTTCA................... 22 2 7 0.29 2 2 0 0 0 0 0 0
...............................................................................................................................................................................................TGCCACACAGATGGTAGGG......................................... 19 0 7 0.29 2 0 0 2 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGTT........................................ 22 1 7 0.29 2 0 2 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGAG......................................... 21 1 7 0.29 2 0 2 0 0 0 0 0
................................................................................................................................................................................................GCCACACAGATGGTAGGG......................................... 18 0 7 0.29 2 0 0 2 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGTTT....................................... 23 2 7 0.29 2 2 0 0 0 0 0 0
.................................................................................................................................................................................................CCACACAGATGGTAGGGTCA...................................... 20 1 7 0.29 2 2 0 0 0 0 0 0
.............TGTGTTCGACATTACCAAGTTTC....................................................................................................................................................................................................................... 23 2 7 0.29 2 2 0 0 0 0 0 0
.............AGTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.29 2 1 1 0 0 0 0 0
.......................................................................................................................................................ATTATATGTGCGGGGCTCTTGA.............................................................................. 22 1 7 0.29 2 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTACCACACAGATGGTAGGG......................................... 21 1 7 0.29 2 1 1 0 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTCTC........................................................... 24 2 7 0.29 2 2 0 0 0 0 0 0
.................................................................................................................................................................................................CCACACAGATGGTAGGGTCTCC.................................... 22 0 7 0.29 2 0 2 0 0 0 0 0
.............................................................................................................................................................................................CTTGCCACACAGATGGTAGGG......................................... 21 1 7 0.29 2 0 1 0 1 0 0 0
.............TGTGTTCGACATTACCAAGCG......................................................................................................................................................................................................................... 21 1 7 0.29 2 0 1 0 1 0 0 0
.............TTTGTTCGACATTACCAAG........................................................................................................................................................................................................................... 19 1 7 0.29 2 0 0 0 0 2 0 0
.............TGTGTTCGAAATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.29 2 1 0 0 1 0 0 0
.............TGTGTTCGACATTACCAATAG......................................................................................................................................................................................................................... 21 1 7 0.29 2 2 0 0 0 0 0 0
.............TGTGTTCGACATTACTAAGAG......................................................................................................................................................................................................................... 21 1 7 0.29 2 2 0 0 0 0 0 0
.............GGTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.29 2 2 0 0 0 0 0 0
...........................................................................................................................................................................................TTTTTGCCACACAGATGGTAGGG......................................... 23 0 7 0.29 2 0 1 1 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACGGATGGTAGGG......................................... 21 1 7 0.29 2 0 2 0 0 0 0 0
...........................................................................................................................................................................................ATTTTGCCACACAGATGGTAGGG......................................... 23 1 7 0.29 2 2 0 0 0 0 0 0
.............TGTGTTCGACATTACCAAAAG......................................................................................................................................................................................................................... 21 1 7 0.29 2 2 0 0 0 0 0 0
.........................................................................................................................................................................TTGGGCATGTCGTCCTCATTTC............................................................ 22 1 7 0.29 2 2 0 0 0 0 0 0
.............TGTGTTCGACATTACCAAGTAA........................................................................................................................................................................................................................ 22 3 7 0.29 2 2 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGAAGG.......................................... 20 1 7 0.29 2 1 0 1 0 0 0 0
.............TGTGTTCGATATTACCAAG........................................................................................................................................................................................................................... 19 1 7 0.29 2 1 0 1 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTAT............................................................ 23 1 7 0.29 2 2 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTTTA..................................... 25 2 7 0.29 2 1 1 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGATAGGG......................................... 21 1 7 0.29 2 1 0 1 0 0 0 0
.............AGTGTTCGACATTACCAAGA.......................................................................................................................................................................................................................... 20 1 7 0.29 2 2 0 0 0 0 0 0
.......................................................................................................................................................ATTATATGTGCGGGGCTCTC................................................................................ 20 1 7 0.29 2 2 0 0 0 0 0 0
.............TGTGTTCGACATTACCACGAG......................................................................................................................................................................................................................... 21 1 7 0.29 2 0 1 0 1 0 0 0
.............TGTGTTCGACATTACCAAGAGG........................................................................................................................................................................................................................ 22 1 7 0.29 2 2 0 0 0 0 0 0
...............................................................................................................................................................TGCGGGGCTCTTGGGCATGTC....................................................................... 21 0 7 0.29 2 1 1 0 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTCTTT.......................................................... 25 2 7 0.29 2 2 0 0 0 0 0 0
.............TGTGTTCGACATTACCAAGAGGA....................................................................................................................................................................................................................... 23 2 7 0.29 2 2 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGTG......................................... 21 1 7 0.29 2 0 1 0 1 0 0 0
.............................................................................................................................................................................................TTTTCCACACAGATGGTAGGG......................................... 21 1 7 0.29 2 0 1 1 0 0 0 0
.............TGTGTTCGACATTACCAAGAGATA...................................................................................................................................................................................................................... 24 3 7 0.29 2 2 0 0 0 0 0 0
.............TGGGTTCGACATTACCAAGA.......................................................................................................................................................................................................................... 20 1 7 0.29 2 1 0 0 1 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTTTTT.................................... 26 3 7 0.29 2 1 1 0 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCAT............................................................... 20 0 7 0.29 2 0 0 1 1 0 0 0
.............TGTGTTCGATATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.29 2 2 0 0 0 0 0 0
.............TGTGTTCGGCATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.29 2 0 2 0 0 0 0 0
..........................................................................................................................................................................................CCATTTGCCACACAGATGGTAGGG......................................... 24 3 7 0.29 2 2 0 0 0 0 0 0
...............................................................................................................................................................................................TTCCACACAGATGGTAGGG......................................... 19 1 8 0.25 2 1 1 0 0 0 0 0
..................................TCGCGTACAGATAATGCTGATCT.................................................................................................................................................................................................. 23 1 5 0.20 1 0 0 1 0 0 0 0
..................................TCGCGTACAGATAATGCTGATAA.................................................................................................................................................................................................. 23 2 5 0.20 1 0 1 0 0 0 0 0
............................CAAGAGTCGCGTACAGATAATG......................................................................................................................................................................................................... 22 0 5 0.20 1 0 1 0 0 0 0 0
........................................ACAGATAATGCTGATCCGTGG.............................................................................................................................................................................................. 21 0 5 0.20 1 0 1 0 0 0 0 0
..................................TCGCGTACAGATAATGCTGC..................................................................................................................................................................................................... 20 1 5 0.20 1 0 1 0 0 0 0 0
....................................GCGTACAGATAATGCTG...................................................................................................................................................................................................... 17 0 5 0.20 1 1 0 0 0 0 0 0
...................................CGCGTACAGATAATGCTGATCC.................................................................................................................................................................................................. 22 0 5 0.20 1 1 0 0 0 0 0 0
..............................AGAGTCGCGTACAGATAATGC........................................................................................................................................................................................................ 21 0 5 0.20 1 1 0 0 0 0 0 0
......................................GTACAGATAATGCTGAT.................................................................................................................................................................................................... 17 0 5 0.20 1 1 0 0 0 0 0 0
..................................TCGCGTACAGATAATGCTGATCC.................................................................................................................................................................................................. 23 0 5 0.20 1 1 0 0 0 0 0 0
..................................TCGCGTACAGATAATGCTGT..................................................................................................................................................................................................... 20 1 5 0.20 1 0 0 1 0 0 0 0
..................................TCGCGTACAGCTAATGCTGA..................................................................................................................................................................................................... 20 1 5 0.20 1 0 1 0 0 0 0 0
..................................TCGCGTACAGATAATGCAGATC................................................................................................................................................................................................... 22 1 5 0.20 1 0 1 0 0 0 0 0
..................................TCGCGTACAGATAATGAT....................................................................................................................................................................................................... 18 1 5 0.20 1 1 0 0 0 0 0 0
.......................ATTACCAAGAGTCGCGTACAGA.............................................................................................................................................................................................................. 22 0 5 0.20 1 0 1 0 0 0 0 0
............................CAAGAGTCGCGTACAGATAATA......................................................................................................................................................................................................... 22 1 5 0.20 1 0 0 0 0 1 0 0
...............................GAGTCGCGTACAGATAATG......................................................................................................................................................................................................... 19 0 5 0.20 1 1 0 0 0 0 0 0
..................................TCGCGTACAGATAATGCCGATC................................................................................................................................................................................................... 22 1 5 0.20 1 0 1 0 0 0 0 0
.................................ATCGCGTACAGATAATGCTGATT................................................................................................................................................................................................... 23 2 5 0.20 1 1 0 0 0 0 0 0
..................................TCGCGTACAGATAATGCTGATCCGTGG.............................................................................................................................................................................................. 27 0 5 0.20 1 1 0 0 0 0 0 0
..................................TTGCGTACAGATAATGCTGAT.................................................................................................................................................................................................... 21 1 5 0.20 1 1 0 0 0 0 0 0
..............................AGAGTCGCGTACAGATAATGCTGA..................................................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0 0
..................................TCGCGTACAGATAATGCTGAA.................................................................................................................................................................................................... 21 1 5 0.20 1 1 0 0 0 0 0 0
..................................TCGCGTACAGATAATGCTGATCCGTG............................................................................................................................................................................................... 26 0 5 0.20 1 0 0 1 0 0 0 0
....................................GCGTACAGATAATGCTGAT.................................................................................................................................................................................................... 19 0 5 0.20 1 1 0 0 0 0 0 0
........................TTACCAAGAGTCGCGTACAGTGC............................................................................................................................................................................................................ 23 3 6 0.17 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................GTCTCCAGTTCTGCTACTGTTCTCGC................ 26 0 6 0.17 1 0 0 1 0 0 0 0
..................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTTCC................... 22 1 6 0.17 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTTCT................... 22 0 6 0.17 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTTA...................................... 24 2 7 0.14 1 0 1 0 0 0 0 0
..............GGGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 20 1 7 0.14 1 0 0 0 0 1 0 0
.............TGTGTCCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.14 1 1 0 0 0 0 0 0
.............TGTATTCGACATTACCAAG........................................................................................................................................................................................................................... 19 1 7 0.14 1 0 0 1 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCCTTC............................................................. 22 2 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGCTAGGG......................................... 21 1 7 0.14 1 0 1 0 0 0 0 0
.........................................................................................................................................................................TTGGGCATGTCGTCCTCATTTTT........................................................... 23 0 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TATGCCACACAGATGGTAGGGA........................................ 22 2 7 0.14 1 0 1 0 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTTTC........................................................... 24 1 7 0.14 1 1 0 0 0 0 0 0
................TTTCGACATTACCAAGA.......................................................................................................................................................................................................................... 17 1 7 0.14 1 1 0 0 0 0 0 0
.............TGTATTCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.14 1 1 0 0 0 0 0 0
......................................................................................................................................................CATTATATGTGCGGGGCTTT................................................................................. 20 1 7 0.14 1 0 0 1 0 0 0 0
.............TGTGTTCGACATTAACAAGAG......................................................................................................................................................................................................................... 21 1 7 0.14 1 1 0 0 0 0 0 0
........................TTACAAAGACTCGCGTACAGA.............................................................................................................................................................................................................. 21 2 7 0.14 1 0 0 0 1 0 0 0
........................................................................................................................................................................................CCCTTTTTGCCACACAGATGGTAGG.......................................... 25 2 7 0.14 1 0 0 1 0 0 0 0
.................TTCGACATTACCAAGAGTCGCG.................................................................................................................................................................................................................... 22 0 7 0.14 1 1 0 0 0 0 0 0
........................................................................................................................................................................CTTTGGCATGTCGTCCTCATT.............................................................. 21 1 7 0.14 1 0 0 0 0 1 0 0
.............TGTGTTCGACATTACCAAGAGTACA..................................................................................................................................................................................................................... 25 3 7 0.14 1 1 0 0 0 0 0 0
....TGACAGCAATGTGTTCGAC.................................................................................................................................................................................................................................... 19 0 7 0.14 1 0 0 1 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTCGAG......................................... 21 2 7 0.14 1 0 0 0 1 0 0 0
.............TTTGTTCGACATTACCAAGAGTTT...................................................................................................................................................................................................................... 24 3 7 0.14 1 0 0 0 0 1 0 0
.............TGTTTTCGACATTACCAAG........................................................................................................................................................................................................................... 19 1 7 0.14 1 0 0 0 0 1 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTCC............................................................ 23 2 7 0.14 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTTTTC.................................... 26 2 7 0.14 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................TTTACCACACAGATGGTAGG.......................................... 20 1 7 0.14 1 0 0 1 0 0 0 0
.............TGTGTTCGACATTACCAAGAGTTAA..................................................................................................................................................................................................................... 25 3 7 0.14 1 1 0 0 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATA.............................................................. 21 1 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGG........................................ 22 1 7 0.14 1 1 0 0 0 0 0 0
...........AATGTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 23 0 7 0.14 1 1 0 0 0 0 0 0
.........................................................................................................................................................................TTGGGCATGTCGTCCTCATTTT............................................................ 22 0 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACATAGATGGTAGGG......................................... 21 1 7 0.14 1 0 0 1 0 0 0 0
.............................................................................................................................................................................................TGTTCCACACAGATGGTAGGG......................................... 21 2 7 0.14 1 0 0 0 0 1 0 0
.............TGGGTGCGACATTACCTAGAGT........................................................................................................................................................................................................................ 22 3 7 0.14 1 0 0 0 1 0 0 0
..............................................................................................................................................................................................TTGCCACACAGATGGTAAGG......................................... 20 1 7 0.14 1 0 0 1 0 0 0 0
.........................................................................................................................................................................TTGGGCATGTCGTCCTCATTCC............................................................ 22 2 7 0.14 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................CCGCACAGATGGTAGGGTCTC..................................... 21 1 7 0.14 1 0 1 0 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTA............................................................. 22 1 7 0.14 1 1 0 0 0 0 0 0
.............TGTGTTCGACATTACTAAGA.......................................................................................................................................................................................................................... 20 1 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTA............................................ 18 0 7 0.14 1 0 0 1 0 0 0 0
..................................................................................................................................................................................................CACACAGATGGTAGGGTCTCC.................................... 21 0 7 0.14 1 0 1 0 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTGCTCATT.............................................................. 21 1 7 0.14 1 1 0 0 0 0 0 0
.............TTTGTTCGACATTACCAAGA.......................................................................................................................................................................................................................... 20 1 7 0.14 1 0 0 0 0 1 0 0
.............................................................................................................................................................................................TTTGCCACACAGAAGGTAGGG......................................... 21 1 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACCGATGGTAGGG......................................... 21 1 7 0.14 1 0 1 0 0 0 0 0
.............TGTGTTCGACAATACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.14 1 1 0 0 0 0 0 0
.............TGTGTTCGACATTACCAACAG......................................................................................................................................................................................................................... 21 1 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCAAACAGATGGTATGG......................................... 21 2 7 0.14 1 0 1 0 0 0 0 0
.............TGTGTTCGACATTACCAAGAGTTTC..................................................................................................................................................................................................................... 25 2 7 0.14 1 1 0 0 0 0 0 0
...........AGTGTGTTCGACATTACCAAGAG......................................................................................................................................................................................................................... 23 1 7 0.14 1 0 0 1 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCTTCATTT............................................................. 22 1 7 0.14 1 1 0 0 0 0 0 0
.................TTCGACATTACCAAGAGTCG...................................................................................................................................................................................................................... 20 0 7 0.14 1 0 0 0 1 0 0 0
.........................................................................................................................................................................TTGGGCATGTCGTCCTCATTC............................................................. 21 1 7 0.14 1 0 0 1 0 0 0 0
..........................................................................................................................................................................TGGGCATGTCGTCCTCATTTTTC.......................................................... 23 1 7 0.14 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................TTGCCACACAGATGGTAG........................................... 18 0 7 0.14 1 0 0 1 0 0 0 0
..............GTGTTCGACATTACCACGAG......................................................................................................................................................................................................................... 20 1 7 0.14 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................AGTGCCACACAGATGGTAGGGG........................................ 22 3 7 0.14 1 0 0 0 1 0 0 0
.............TGGGGTCGACATTACCAAGAGT........................................................................................................................................................................................................................ 22 2 7 0.14 1 0 0 0 1 0 0 0
.........CAAGTGTGTTCGACATTACCAAG........................................................................................................................................................................................................................... 23 3 7 0.14 1 0 0 1 0 0 0 0
................GTTCGACATTACCAAGAGTC....................................................................................................................................................................................................................... 20 0 7 0.14 1 0 0 1 0 0 0 0
........................................................................................................................................................TTATATGTGCGGGGCTCTTT............................................................................... 20 1 7 0.14 1 1 0 0 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTTTTT.......................................................... 25 1 7 0.14 1 0 1 0 0 0 0 0
.............TGTGTTCGACATTGCCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTCCCACACAGATGCTAGGG......................................... 21 2 7 0.14 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTTC...................................... 24 2 7 0.14 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................TTCGCCACACAGATGGTAGG.......................................... 20 1 7 0.14 1 0 0 1 0 0 0 0
................................................................................................................................................................................................ACCACACAGATGGTAGGG......................................... 18 1 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGAGGGTATGG......................................... 21 2 7 0.14 1 0 0 0 1 0 0 0
.............TGTGATCGACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.14 1 1 0 0 0 0 0 0
.............TGTGTTCGACGTTACCAAGA.......................................................................................................................................................................................................................... 20 1 7 0.14 1 1 0 0 0 0 0 0
...................................................................................................CATCATCGAGGGCCGCCCATACAAGG.............................................................................................................................. 26 0 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGGAGGG......................................... 21 1 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTCGCCACACAGATGGTAG........................................... 19 1 7 0.14 1 0 0 0 1 0 0 0
.............TGTGTTCGACATTACCAAGAGTATC..................................................................................................................................................................................................................... 25 2 7 0.14 1 0 1 0 0 0 0 0
.............TGCGTTCGACATTACCAAGAGTT....................................................................................................................................................................................................................... 23 2 7 0.14 1 0 1 0 0 0 0 0
.............TGTGTTCGACATTACCAAGAAT........................................................................................................................................................................................................................ 22 1 7 0.14 1 0 0 1 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTTGGG......................................... 21 1 7 0.14 1 1 0 0 0 0 0 0
......................................................................................................................................................CATTATATGTGCGGGGCTCTT................................................................................ 21 0 7 0.14 1 0 1 0 0 0 0 0
.............TGTGTTCGACATTCCCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.14 1 0 1 0 0 0 0 0
.............TGTGTTCTACATTACCAAGAG......................................................................................................................................................................................................................... 21 1 7 0.14 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAAGGA........................................ 22 2 7 0.14 1 0 1 0 0 0 0 0
.............TGTGTTCGACATCACCAAG........................................................................................................................................................................................................................... 19 1 7 0.14 1 1 0 0 0 0 0 0
.............TGTATTCGACATTACCAAGA.......................................................................................................................................................................................................................... 20 1 7 0.14 1 1 0 0 0 0 0 0
......ACAGCAATGTGTTCGACATTACCAAG........................................................................................................................................................................................................................... 26 0 7 0.14 1 0 0 0 1 0 0 0
.............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGAAA...................................... 24 3 7 0.14 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................TTTGCCATACAGATGGTAGGG......................................... 21 1 7 0.14 1 0 1 0 0 0 0 0
........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTTT............................................................ 23 0 7 0.14 1 0 0 0 0 0 0 1
.............................................................................................................................................................................................TTTGCCACACAGATAGTAGGG......................................... 21 1 7 0.14 1 0 0 0 1 0 0 0
.............TGTGTTCGACATTACAAAGA.......................................................................................................................................................................................................................... 20 1 7 0.14 1 1 0 0 0 0 0 0
.................................................................................................................................................................................CTCGTCCTCATTTTTGCCACAC.................................................... 22 1 7 0.14 1 0 0 1 0 0 0 0

Anti-sense strand reads

ACACACTGTCGTTACACAAGCTGTAATGGTTCTCAGCGCATGTCTATTACGACTAGGCACCGTAGGTGAGTGTTGCTTCACGACGGTGGTCCGGTCCGGGTAGTAGCTCCCGGCGGGTATGTTCCGGCTGACTATCGACAGCCGCTAGTTGTAATATACACGCCCCGAGAACCCGTACAGCAGGAGTAAAAACGGTGTGTCTACCATCCCAGAGGTCAAGACGATGACAAGAGCGTACATGCTCTTACATG
**************************************************************..((((((.........((((.((((...)))).))))))))))......******************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 M022
male body		 SRR902010
ovaries
 GSM343916
embryo
.................................................................................................................................................................................CAGCAGGAGTAAAAACGGTGT..................................................... 21 0 7 0.14 1 0 1 0 0 0
............................................................CGTAGGTGAGTGTTGCTTCA........................................................................................................................................................................... 20 0 7 0.14 1 0 1 0 0 0
....................................................................................................TAGTTGCTCCCAGCGGGTA.................................................................................................................................... 19 2 8 0.13 1 0 0 1 0 0
............................................................................................................................................................................................................................ACTATAACAAAAGCGTACATG.......... 21 3 9 0.11 1 1 0 0 0 0
.............................................................................................................................................................................................................ATCACAGCGGTCAAGACG............................ 18 2 9 0.11 1 0 0 0 1 0
..........................................................................................................CTCCCGGCTGGTATGATC............................................................................................................................... 18 2 10 0.10 1 1 0 0 0 0
...........................................................................................CGGTCCGGGAGGTAGCTGCCG........................................................................................................................................... 21 3 12 0.08 1 1 0 0 0 0
.................................................................................................................CGGGTTTGTTCGGGCTGA........................................................................................................................ 18 2 12 0.08 1 0 0 0 0 1
................................................................................................CGGGTAGTAGCGCGCGGAGG....................................................................................................................................... 20 3 16 0.06 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_singleton_3382:2889-3139 - dps_2365 TGTGTGACAGCAATGTGTTCGACATTACCAAGAGTCGCGTACAGATAATGCTGATCCGTGGCATCCACTCACAACGAAGTGCTGCCACCAGGCCAGGCCCATCATCGAG--GGCCGCCCATACAAGGCCGACTGATAGCTGTCGGCGATCAACATTATATGTGCGGGGCTCTTGGGCATGTCGTCCTCATTTTTGCCACACAGATGGTAGGGTCTCCAGTTCTGCTACTGTTCTCGCATGTACGAGAATGTAC
droPer2 scaffold_23:706723-706973 + TGTGTGACAGCAATGTGTTCGACATTACCAAGAGTCGCGTACAGATAATGCTGATCCGTGGCATCCACTCACAACGAAGTGCTGCCACCAGGCCAGGCCCATCATCGAG--GGCCGCCCATACAAGGCCGACTGATAGCTGTCGGCGATCAGCATTATATGTGCGGGGCTCTTGGGCATGTCGTCCTCATTTTTGCCACACAGATGGTAGGGTCTCCAGTTCTGCTACTGTTCTCGCATGTACGAGAATGTAC
droBip1 scf7180000396569:2062505-2062608 - TGTTCGACGACAACGTGGAGGACATCGCCAAGAGCCTGGCCCAGATAATGCTCATCTGCGGCATCAA--CACGAGCAAGTCCTGCA---TGGCCAAGTCGATCATAAAG------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302510:1077681-1077791 - CT------GGCCATGCGGG--ACTTGCAGGTACCAATGCCGCAGATCACCATTATCTGGGCCAGGCT--CTTGGCTATGTCCTCCA---CATTGTCGTCGA--------------------------------------------------------------------------------------------------ACAGCTGGTAGGGA-TCCAGTTTT------------------------------
droBia1 scf7180000300910:1539210-1539319 - TGTTCGATGACAATGTGGAGGACATAGCCAAGAGCCTGGCTCAGATAATGCTGATCTGCGGCATCAG--CACGGCCAAATCCTGTG---CTGCCAGGTCGATAATCAAGAGGGCC------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409007:247777-247858 - TGTTCGACGACAATGTCGAGGACATAGCCAAGAGTCTGTCCCAGATAATGCTGATCTGCGGCATCAG--CACGACCAAGTCCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3L:1423164-1423253 - TGTTTGACGATAATGTGGAGGATATAGCCAAGAGCCTGGCGCAGATAATGCTGATCTGTGGCATCAG--CACAAGCAAATCCAGCG---CTGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3l:1348452-1348561 - TGTTTGACGATAATGTGGAGGACATAGCCAAGAGCCTGGCCCAGATAATGCTGATCTGCGGCATCAG--CACAAGCAAATCCTACG---CGGCCAGATCGATAATCAAGAGGGCC------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_11962:931-1040 - TGTTTGACGATAATGTGGAGGACATAGCCAAGAGCCTGGCCCAGATAATGCTGATCTGCGGCATCAG--CACAAGCAAATCCTGCG---CGGCCAGGTCGATAATCAAGAGGGCC------------------------------------------------------------------------------------------------------------------------------------------
droYak3 3L:1385859-1385964 - TGTTTGACGACAATGTGGAGGACATTGCCAAGAGTCTGGCGCAGATAATGCTGATCTGCGGCATCAG--CACCACAAAATCCTGTG---CCGCCAGGTCGATAATCAAGAG----------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TGTGTGACAGCAATGTGTTCGACATTACCAAGAGTCGCGTACAGATAATGCTGATCCGTGGCATCCACTCACAACGAAGTGCTGCCACCAGGCCAGGCCCATCATCGAG--GGCCGCCCATACAAGGCCGACTGATAGCTGTCGGCGATCAACATTATATGTGCGGGGCTCTTGGGCATGTCGTCCTCATTTTTGCCACACAGATGGTAGGGTCTCCAGTTCTGCTACTGTTCTCGCATGTACGAGAATGTACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............TGTGTTCGACATTACCAAGAG...........................................................................................................................................................................................................................217986.86690871900140991106054875
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGG.........................................217451.143158055302202301138012150
.............TGTGTTCGACATTACCAAGA............................................................................................................................................................................................................................207187.0013090350201354012032
.............TGTGTTCGACATTACCAAG.............................................................................................................................................................................................................................19798.14687144102017606052
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGG..........................................20730.5721401090605200740
.............TGTGTTCGACATTACCAAGAA...........................................................................................................................................................................................................................21725.861810120301501600
..................................TCGCGTACAGATAATGCTGA.......................................................................................................................................................................................................20516.6083330002360390
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCATT..............................................................21710.717516000160610
.........................................................................................................................................................ATTATATGTGCGGGGCTCTTG...............................................................................21710.1471010001310380
..................................TCGCGTACAGATAATGCTGAT......................................................................................................................................................................................................2158.804412000020390
.............TGTGTTCGACATTACCAAGAGA..........................................................................................................................................................................................................................2278.716101000070530
.............TGTGTTCGACATTACCAAGAGT..........................................................................................................................................................................................................................2277.4352030104240200
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGA........................................2276.8648050002190220
.............TGTGTTCGACATTACCAAGAGTT.........................................................................................................................................................................................................................2376.714702010240020
................................................................................................................................................................................................TTGCCACACAGATGGTAGGG.........................................2076.294403800032010
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGT........................................2275.7140030002190160
....................................................................................................................................................TCAACATTATATGTGCGGGG.....................................................................................2025.50110201002060
..................................TCGCGTACAGATAATGCTGATC.....................................................................................................................................................................................................2255.4027220000110120
....................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTTC....................2164.832912010020230
..............GTGTTCGACATTACCAAGAG...........................................................................................................................................................................................................................2074.0028015000010030
.............TGTGTTCGACATTACCAAGT............................................................................................................................................................................................................................2073.29230300038090
..........................................................................................................................................................TTATATGTGCGGGGCTCTTGG..............................................................................2172.862000000020180
....TGACAGCAATGTGTTCGACAT....................................................................................................................................................................................................................................2172.862003000213020
.............TGTGTTCGACATTACCAAGAAA..........................................................................................................................................................................................................................2272.711900000020170
......................CATTACCAAGAGTCGCGTAC...................................................................................................................................................................................................................2072.57182000008080
...................................................................................................................................................................................................CCACACAGATGGTAGGGTC.......................................1972.431711000015000
...................................................................................................................................................................................................CCACACAGATGGTAGGGTCTC.....................................2172.29162200019020
..........................................................................................................................................................TTATATGTGCGGGGCTCTTG...............................................................................2072.291600000010060
.............TGTGTTCGACATTACCAAGAGAA.........................................................................................................................................................................................................................2372.141501000130100
.............TGTGTTCGACATTACCAAGAGTC.........................................................................................................................................................................................................................2372.00140100006070
...............................................................................................................................................................................................TTTGCCACACAGATGGTAG...........................................1971.86130600000070
...........................................................................................................................................................TATATGTGCGGGGCTCTTGGG.............................................................................2171.711200000020100
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGT.........................................2171.711200000020100
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTC.............................................................2271.57110100010090
............................................................................................................................................................ATATGTGCGGGGCTCTTGG..............................................................................1971.57110000003080
...........................................................................................................................................................TATATGTGCGGGGCTCTTGG..............................................................................2071.57110000002090
....................................................................................................................................................TCAACATTATATGTGCGGGGC....................................................................................2121.5030200000010
..........................................................................................................................................................TTATATGTGCGGGGCTCTTGGG.............................................................................2271.43100100002070
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGA.........................................2171.43100200011060
..............................................................................................................................................................................................TTTTGCCACACAGATGGTAGG..........................................2171.1480300000050
...................................................................................................................................................................................................CCACACAGATGGTAGGGTCT......................................2071.1481000007000
......................CATTACCAAGAGTCGCGTACA..................................................................................................................................................................................................................2171.0070000002050
..................................TCGCGTACAGATAATGCTGATT.....................................................................................................................................................................................................2251.0050100000040
....................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTT.....................2061.0060000000060
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTT.......................................2370.8660000004020
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGAA.......................................2370.8660000014010
........................TTACCAAGAGTCGCGTACAG.................................................................................................................................................................................................................2050.8041000001020
..............................AGAGTCGCGTACAGATAATG...........................................................................................................................................................................................................2050.8041000011010
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTT.............................................................2270.7150000000050
.............TGTGTTCGACATTACCAAGAC...........................................................................................................................................................................................................................2170.7150002001020
.............TGTGTTCGACATTACCAAGAT...........................................................................................................................................................................................................................2170.7150000000050
.........................................................................................................................................................ATTATATGTGCGGGGCTCTT................................................................................2070.7150001001030
.............TGTGTTCGACATTACCAAA.............................................................................................................................................................................................................................1980.6350000010040
........................TTACCAAGAGTCGCGTACAGA................................................................................................................................................................................................................2150.6031000000020
.........................TACCAAGAGTCGCGTACAGATA..............................................................................................................................................................................................................2250.6030000003000
..........................................................................................................................................................................CTTGGGCATGTCGTCCTC.................................................................1870.5743000000010
...............TGTTCGACATTACCAAGAGTC.........................................................................................................................................................................................................................2170.5740000004000
............ATGTGTTCGACATTACCAAGAG...........................................................................................................................................................................................................................2270.5740000000040
....................................................................................................................................................................GGGGCTCTTGGGCATGTCG......................................................................1970.5740000002020
................................................................................................................................................................................................TTGCCACACAGATGGTAGG..........................................1970.5740400000000
.............TGTGTTCGACATTACCAAGTT...........................................................................................................................................................................................................................2170.5740000001030
....................................................................................................................................................................GGGGCTCTTGGGCATGTCGTC....................................................................2170.5740000003010
.............................................................................................................................................................................................TTTTTGCCACACAGATGGTAGG..........................................2270.5740200001010
.............TGTGTTCGACATTACCAAGAGTA.........................................................................................................................................................................................................................2370.5740000001030
.............TGTGTTCGACATTACCAA..............................................................................................................................................................................................................................1870.5740000000040
............................................................................................................................................................................TGGGCATGTCGTCCTCATTTT............................................................2170.5740000000040
...............TGTTCGACATTACCAAGAG...........................................................................................................................................................................................................................1970.5740000001030
.............................................................................................................................................TCGGCGATCAACATTATATGT...........................................................................................2120.5010000001000
......................................................................................................................................................AACATTATATGTGCGGG......................................................................................1720.5010000000010
......................................................................................................................................................AACATTATATGTGCGGGGC....................................................................................1920.5010000001000
......................................................................................................................................................AACATTATATGTGCGGGGCTC..................................................................................2120.5011000000000
....................................................................................................................................................TCAACATTATATGTGCGG.......................................................................................1820.5010000000010
......................................................................................................................................................AACATTATATGTGCGGGGCTT..................................................................................2120.5010000001000
....................................................................................................................................................TCAACATTATATGTGCGGG......................................................................................1920.5010100000000
................................................................................................................................................................................................TTGCCACACAGATGGTAGGGTC.......................................2270.4330100002000
.............TGTGTTCGACATTACCAAGAGTCGCG......................................................................................................................................................................................................................2670.4330000012000
....TGACAGCAATGTGTTCGACA.....................................................................................................................................................................................................................................2070.4330000012000
............................................................................................................................................................................TGGGCATGTCGTCCTCATTTTT...........................................................2270.4330000000030
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGAA........................................2270.4330000000030
.............................................................................................................................................................TATGTGCGGGGCTCTTGGGC............................................................................2070.4330000000030
..........................................................................................................................................................TTATATGTGCGGGGCTCTT................................................................................1970.4330000001020
...................................................................................................................................................................................................CCACACAGATGGTAGGGTCTT.....................................2170.4331000002000
.............TGTGTTCGACATTACCAAGAGTTT........................................................................................................................................................................................................................2470.4330000003000
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGC........................................2270.4330100001010
.............................................................................................................................................................TATGTGCGGGGCTCTTGGG.............................................................................1970.4330000002010
...................CGACATTACCAAGAGTCGCG......................................................................................................................................................................................................................2070.4330100002000
............................................................................................................................................................ATATGTGCGGGGCTCTTGGG.............................................................................2070.4330000000030
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTC.......................................2370.4330100002000
..............................................................................................................................................................................................TTTTGCCACACAGATGGTAGGG.........................................2270.4330100001010
....................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTTT....................2170.4330000000030
............................................................................................................................................................ATATGTGCGGGGCTCTTGGGC............................................................................2170.4330000000030
.........................TACCAAGAGTCGCGTACAGAT...............................................................................................................................................................................................................2150.4020000002000
..................................TCGCGTACAGATAATGCTG........................................................................................................................................................................................................1950.4020000000020
.............TGTGTTCGACATTACC................................................................................................................................................................................................................................1680.3830000000030
.................................................................................................................................................................................................TGCCACACAGATGGTAGGGTC.......................................2170.2920000011000
.........................................................................................................................................................ATTATATGTGCGGGGCTCTTA...............................................................................2170.2920100000010
.........................................................................................................................................................ATTATATGTGCGGGGCTC..................................................................................1870.2922000000000
.........................................................................................................................................................ATTATATGTGCGGGGCTCTTT...............................................................................2170.2920000001010
...................................................................................................................................................................................................CCACACAGATGGTAGGGTCTCTC...................................2370.2920000000020
.................................................................................................................................................................................................TGCCACACAGATGGTAGGG.........................................1970.2920200000000
..................................................................................................................................................................................................GCCACACAGATGGTAGGG.........................................1870.2920200000000
...................................................................................................................................................................................................CCACACAGATGGTAGGGTCA......................................2070.2920000000020
.........................................................................................................................................................ATTATATGTGCGGGGCTCTTGA..............................................................................2270.2920000001010
...................................................................................................................................................................................................CCACACAGATGGTAGGGTCTCC....................................2270.2920000002000
.............................................................................................................................................................................................TTTTTGCCACACAGATGGTAGGG.........................................2370.2920100001000
...........................................................................................................................................................................TTGGGCATGTCGTCCTCATTTC............................................................2270.2920000000020
.............TGTGTTCGACATTACCAAGTAA..........................................................................................................................................................................................................................2270.2920000000020
.........................................................................................................................................................ATTATATGTGCGGGGCTCTC................................................................................2070.2920000000020
.............TGTGTTCGACATTACCAAGAGG..........................................................................................................................................................................................................................2270.2920000000020
.................................................................................................................................................................TGCGGGGCTCTTGGGCATGTC.......................................................................2170.2920000001010
.............TGTGTTCGACATTACCAAGAGGA.........................................................................................................................................................................................................................2370.2920000000020
.............TGTGTTCGACATTACCAAGAGATA........................................................................................................................................................................................................................2470.2920000000020
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCAT...............................................................2070.2920100010000
..................................TCGCGTACAGATAATGCTGATCT....................................................................................................................................................................................................2350.2010100000000
..................................TCGCGTACAGATAATGCTGATAA....................................................................................................................................................................................................2350.2010000001000
............................CAAGAGTCGCGTACAGATAATG...........................................................................................................................................................................................................2250.2010000001000
........................................ACAGATAATGCTGATCCGTGG................................................................................................................................................................................................2150.2010000001000
..................................TCGCGTACAGATAATGCTGC.......................................................................................................................................................................................................2050.2010000001000
....................................GCGTACAGATAATGCTG........................................................................................................................................................................................................1750.2010000000010
...................................CGCGTACAGATAATGCTGATCC....................................................................................................................................................................................................2250.2010000000010
..............................AGAGTCGCGTACAGATAATGC..........................................................................................................................................................................................................2150.2010000000010
......................................GTACAGATAATGCTGAT......................................................................................................................................................................................................1750.2010000000010
..................................TCGCGTACAGATAATGCTGATCC....................................................................................................................................................................................................2350.2010000000010
..................................TCGCGTACAGATAATGCTGT.......................................................................................................................................................................................................2050.2010100000000
.......................ATTACCAAGAGTCGCGTACAGA................................................................................................................................................................................................................2250.2010000001000
............................CAAGAGTCGCGTACAGATAATA...........................................................................................................................................................................................................2250.2010001000000
...............................GAGTCGCGTACAGATAATG...........................................................................................................................................................................................................1950.2010000000010
..................................TCGCGTACAGATAATGCTGATCCGTGG................................................................................................................................................................................................2750.2010000000010
..............................AGAGTCGCGTACAGATAATGCTGA.......................................................................................................................................................................................................2450.2010000000010
..................................TCGCGTACAGATAATGCTGAA......................................................................................................................................................................................................2150.2010000000010
..................................TCGCGTACAGATAATGCTGATCCGTG.................................................................................................................................................................................................2650.2010100000000
....................................GCGTACAGATAATGCTGAT......................................................................................................................................................................................................1950.2010000000010
........................TTACCAAGAGTCGCGTACAGTGC..............................................................................................................................................................................................................2360.1710000000010
...................................................................................................................................................................................................................GTCTCCAGTTCTGCTACTGTTCTCGC................2660.1710100000000
....................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTTCC...................2260.1710000000010
....................................................................................................................................................................................................................TCTCCAGTTCTGCTACTGTTCT...................2260.1710000000010
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTTA......................................2470.1410000001000
...........................................................................................................................................................................TTGGGCATGTCGTCCTCATTTTT...........................................................2370.1410000000010
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTTTC...........................................................2470.1410000000010
.................TTCGACATTACCAAGAGTCGCG......................................................................................................................................................................................................................2270.1410000000010
.............TGTGTTCGACATTACCAAGAGTACA.......................................................................................................................................................................................................................2570.1410000000010
....TGACAGCAATGTGTTCGAC......................................................................................................................................................................................................................................1970.1410100000000
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTCC............................................................2370.1410000001000
.............TGTGTTCGACATTACCAAGAGTTAA.......................................................................................................................................................................................................................2570.1410000000010
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCATA..............................................................2170.1410000000010
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGG........................................2270.1410000000010
...........AATGTGTTCGACATTACCAAGAG...........................................................................................................................................................................................................................2370.1410000000010
...........................................................................................................................................................................TTGGGCATGTCGTCCTCATTTT............................................................2270.1410000000010
...........................................................................................................................................................................TTGGGCATGTCGTCCTCATTCC............................................................2270.1410000000010
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTA.............................................................2270.1410000000010
...............................................................................................................................................................................................TTTGCCACACAGATGGTA............................................1870.1410100000000
....................................................................................................................................................................................................CACACAGATGGTAGGGTCTCC....................................2170.1410000001000
.................TTCGACATTACCAAGAGTCG........................................................................................................................................................................................................................2070.1410000010000
...........................................................................................................................................................................TTGGGCATGTCGTCCTCATTC.............................................................2170.1410100000000
............................................................................................................................................................................TGGGCATGTCGTCCTCATTTTTC..........................................................2370.1410000000010
................................................................................................................................................................................................TTGCCACACAGATGGTAG...........................................1870.1410100000000
................GTTCGACATTACCAAGAGTC.........................................................................................................................................................................................................................2070.1410100000000
..........................................................................................................................................................TTATATGTGCGGGGCTCTTT...............................................................................2070.1410000000010
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTTTTT..........................................................2570.1410000001000
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGTTC......................................2470.1410000001000
...................................................................................................CATCATCGAG--GGCCGCCCATACAAGG..............................................................................................................................2670.1410000000010
........................................................................................................................................................CATTATATGTGCGGGGCTCTT................................................................................2170.1410000001000
......ACAGCAATGTGTTCGACATTACCAAG.............................................................................................................................................................................................................................2670.1410000010000
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGAAA......................................2470.1410000000010
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCATTTT............................................................2370.1410000000001
droPer2
TGTGTGACAGCAATGTGTTCGACATTACCAAGAGTCGCGTACAGATAATGCTGATCCGTGGCATCCACTCACAACGAAGTGCTGCCACCAGGCCAGGCCCATCATCGAG--GGCCGCCCATACAAGGCCGACTGATAGCTGTCGGCGATCAGCATTATATGTGCGGGGCTCTTGGGCATGTCGTCCTCATTTTTGCCACACAGATGGTAGGGTCTCCAGTTCTGCTACTGTTCTCGCATGTACGAGAATGTACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............TGTGTTCGACATTACCAAGAG...........................................................................................................................................................................................................................21267.5013504050126
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGG.........................................21245.509101706068
.............TGTGTTCGACATTACCAAGAGTT.........................................................................................................................................................................................................................23218.00360000036
..................................TCGCGTACAGATAATGCTGA.......................................................................................................................................................................................................20216.50330000033
.............TGTGTTCGACATTACCAAGA............................................................................................................................................................................................................................2026.00120101010
...................................................................................................................................................................................................CCACACAGATGGTAGGGTC.......................................1925.50110000011
..................................TCGCGTACAGATAATGCTGAT......................................................................................................................................................................................................2125.00100000010
..............GTGTTCGACATTACCAAGAG...........................................................................................................................................................................................................................2024.509000009
.............TGTGTTCGACATTACCAAGAGT..........................................................................................................................................................................................................................2224.509000009
..................................TCGCGTACAGATAATGCTGATC.....................................................................................................................................................................................................2224.008010007
....TGACAGCAATGTGTTCGACAT....................................................................................................................................................................................................................................2123.507000007
...................................................................................................................................................................................................CCACACAGATGGTAGGGTCT......................................2022.505000005
.........................................................................................................................................................ATTATATGTGCGGGGCTCTT................................................................................2022.505000203
.............TGTGTTCGACATTACCAAGT............................................................................................................................................................................................................................2022.505000005
.............TGTGTTCGACATTACCAAGAGTC.........................................................................................................................................................................................................................2322.505000005
...................................................................................................................................................................................................CCACACAGATGGTAGGGTCTCC....................................2222.505000005
.............TGTGTTCGACATTACCAAG.............................................................................................................................................................................................................................1922.004100300
....TGACAGCAATGTGTTCGAC......................................................................................................................................................................................................................................1922.004000004
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGT........................................2222.004010003
................................AGTCGCGTACAGATAATGCTG........................................................................................................................................................................................................2121.503000003
..............GTGTTCGACATTACCAAGAGTT.........................................................................................................................................................................................................................2221.503000003
.....................................................................................................................................................................................................ACACAGATGGTAGGGTCTCCA...................................2121.503000003
..........................................................................................................................................................TTATATGTGCGGGGCTCTTGGG.............................................................................2221.503010002
.................................................................................................................................................................................................TGCCACACAGATGGTAGGG.........................................1921.503020100
....................................................................................................................................................................GGGGCTCTTGGGCATGTCGTC....................................................................2121.503000003
.............TGTGTTCGACATTACCAAGAGTTC........................................................................................................................................................................................................................2421.503000003
....TGACAGCAATGTGTTCGACA.....................................................................................................................................................................................................................................2021.503000003
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGGGA........................................2221.002000002
..............GTGTTCGACATTACCAAGAGT..........................................................................................................................................................................................................................2121.002000002
..................................................................................................................................................................GCGGGGCTCTTGGGCATGTCG......................................................................2121.002000002
................GTTCGACATTACCAAGAGTT.........................................................................................................................................................................................................................2021.002000002
......................CATTACCAAGAGTCGCGTACA..................................................................................................................................................................................................................2121.002000002
.......................ATTACCAAGAGTCGCGTACAGA................................................................................................................................................................................................................2221.002000002
..............................AGAGTCGCGTACAGATAATG...........................................................................................................................................................................................................2021.002000002
....................................................................................................................................................................GGGGCTCTTGGGCATGTCGT.....................................................................2021.002000002
....................................................................................................................................................................GGGGCTCTTGGGCATGTCG......................................................................1921.002000002
...............................................................................................................................................................................................TTTGCCACACAGATGGTAGG..........................................2021.002010001
...........................................................................................................................................................TATATGTGCGGGGCTCTTGG..............................................................................2021.002000002
.............TGTGTTCGACATTACCAAGAGA..........................................................................................................................................................................................................................2221.002000002
.............TGTGTTCGACATTACCAAGAGTCGCG......................................................................................................................................................................................................................2621.002000002
.........................TACCAAGAGTCGCGTACAGA................................................................................................................................................................................................................2020.501000001
................................................................................................................................................................................................TTGCCACACAGATGGTAGGG.........................................2020.501000001
................................................................................................................................................................................................TTGCCACACAGATGGTAGGGT........................................2120.501000001
..........................................................................................................................................................TTATATGTGCGGGGCTCTTGG..............................................................................2120.501000001
..................................TCGCGTACAGATAATGCTGATT.....................................................................................................................................................................................................2220.501000001
.........................................................................................................................................GCTGTCGGCGATCAGCATTATATGTGCG........................................................................................2820.501000001
.............TGTGTTCGACATTACCAAGTC...........................................................................................................................................................................................................................2120.501000001
........................TTACCAAGAGTCGCGTACAGATT..............................................................................................................................................................................................................2320.501000001
.............TGTGTTCGACATTACCAAGAGATT........................................................................................................................................................................................................................2420.501000001
........................TTACCAAGAGTCGCGTACAG.................................................................................................................................................................................................................2020.501000001
............................................................................................................................................................ATATGTGCGGGGCTCTTGGGTT...........................................................................2220.501000001
..................................TCGCGTACAGATAATGCTGATCC....................................................................................................................................................................................................2320.501000001
..................................TCGCGTACAGATAATGCTGATA.....................................................................................................................................................................................................2220.501000001
......................................................................................................................................................................................................CACAGATGGTAGGGTCTCCAG..................................2120.501000001
.............TGTGTTCGACATTACCAAGAA...........................................................................................................................................................................................................................2120.501000001
.............................................................................................................................................................TATGTGCGGGGCTCTTGGG.............................................................................1920.501000001
.............TGTGTTCGACATTACCAAGAGTA.........................................................................................................................................................................................................................2320.501000001
.............TGTGTTCGACATTACCAAGAT...........................................................................................................................................................................................................................2120.501000001
....................................................................................................................................................TCAGCATTATATGTGCGGGGCTT..................................................................................2320.501000001
....TGACAGCAATGTGTTCGACAA....................................................................................................................................................................................................................................2120.501000001
......................................................................................................................................................................................................CACAGATGGTAGGGTCTCCAA..................................2120.501010000
.......................................................................................................................................................GCATTATATGTGCGGGGA....................................................................................1820.501000001
........................TTACCAAGAGTCGCGTACAGAT...............................................................................................................................................................................................................2220.501000001
..........................................................................................................................................................................CTTGGGCATGTCGTCCTCATT..............................................................2120.501000001
.......................................................................................................................................................GCATTATATGTGCGGGGCTCC.................................................................................2120.501000001
..............GTGTTCGACATTACCAAGAGTC.........................................................................................................................................................................................................................2220.501000001
....TGACAGCAATGTGTTCGACATC...................................................................................................................................................................................................................................2220.501000001
......................................................................................................................................................................................................CACAGATGGTAGGGTCTCCAGA.................................2220.501000010
........................TTACCAAGAGTCGCGTACAGA................................................................................................................................................................................................................2120.501000001
...................................................................................................................................................................................................CCACACAGATGGTAGGGTCTC.....................................2120.501000001
....................................................................................................................................................................GGGGCTCTTGGGCATGTC.......................................................................1820.501010000
...............................................................................................................................................GGCGATCAGCATTATATGTGCGGGG.....................................................................................2520.501000001
..............................AGAGTCGCGTACAGATAATGC..........................................................................................................................................................................................................2120.501000001
..............................AGAGTCGCGTACAGATAATGT..........................................................................................................................................................................................................2120.501000001
...........................................................................................................................................................TATATGTGCGGGGCTCTTGGG.............................................................................2120.501000001
................................AGTCGCGTACAGATAATG...........................................................................................................................................................................................................1820.501000001
...............................GAGTCGCGTACAGATAATG...........................................................................................................................................................................................................1920.501000001
......................CATTACCAAGAGTCGCGTAC...................................................................................................................................................................................................................2020.501000100
............................CAAGAGTCGCGTACAGATAAT............................................................................................................................................................................................................2130.331000010
.............................AAGAGTCGCGTACAGATAAT............................................................................................................................................................................................................2030.331000001
droBip1
TGTTCGACGACAACGTGGAGGACATCGCCAAGAGCCTGGCCCAGATAATGCTCATCTGCGGCATCAA--CACGAGCAAGTCCTGCA---TGGCCAAGTCGATCATAAAG------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CT------GGCCATGCGGG--ACTTGCAGGTACCAATGCCGCAGATCACCATTATCTGGGCCAGGCT--CTTGGCTATGTCCTCCA---CATTGTCGTCGA--------------------------------------------------------------------------------------------------ACAGCTGGTAGGGA-TCCAGTTTT------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TGTTCGATGACAATGTGGAGGACATAGCCAAGAGCCTGGCTCAGATAATGCTGATCTGCGGCATCAG--CACGGCCAAATCCTGTG---CTGCCAGGTCGATAATCAAGAGGGCC------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TGTTCGACGACAATGTCGAGGACATAGCCAAGAGTCTGTCCCAGATAATGCTGATCTGCGGCATCAG--CACGACCAAGTCCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TGTTTGACGATAATGTGGAGGATATAGCCAAGAGCCTGGCGCAGATAATGCTGATCTGTGGCATCAG--CACAAGCAAATCCAGCG---CTGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................TAATGCTGATCTGTGGCATCA...........................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TAATGTGGAGGATATAGCCA...............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................GGATATAGCCAAGAGCCTGGCG....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........AATGTGGAGGATATAGCCAAGAGC..........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................GGAGGATATAGCCAAGAGCCT........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................................AGATAATGCTGATCTGTGGC...............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TGTTTGACGATAATGTGGAGGATATAGC.................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
droSim2
TGTTTGACGATAATGTGGAGGACATAGCCAAGAGCCTGGCCCAGATAATGCTGATCTGCGGCATCAG--CACAAGCAAATCCTACG---CGGCCAGATCGATAATCAAGAGGGCC------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...TTGACGATAATGTGGAGGACA.....................................................................................................................................................................................................................................2111.00100000000001000000
.......CGATAATGTGGAGGACATAGC.................................................................................................................................................................................................................................2111.00100001000000000000
droSec2
TGTTTGACGATAATGTGGAGGACATAGCCAAGAGCCTGGCCCAGATAATGCTGATCTGCGGCATCAG--CACAAGCAAATCCTGCG---CGGCCAGGTCGATAATCAAGAGGGCC------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TGTTTGACGACAATGTGGAGGACATTGCCAAGAGTCTGGCGCAGATAATGCTGATCTGCGGCATCAG--CACCACAAAATCCTGTG---CCGCCAGGTCGATAATCAAGAG----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads

Generated: 05/18/2015 at 04:21 AM