ID:

dps_2358

 Coordinate:

Unknown_singleton_3286:1090-1152 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.4 -6.2 -6.0

Flybase annnotation

exon [dpse_GLEANR_9733:2]; exon [dpse_GLEANR_9733:1]; CDS [Dpse\GA29180-cds]; CDS [Dpse\GA29180-cds]; intron [Dpse\GA29180-in]

No Repeatable elements found

mature
  1. dps_1021  3:4972870-4972893 +
  2. dps_2358  Unknown_singleton_3286:1128-1151 -
star
  1. dps_1021  3:4972904-4972930 +
  2. dps_2358  Unknown_singleton_3286:1091-1117 -
  3. dps_3369  XR_group8:7884506-7884532 +

Sense Strand Reads

##################################################---------------------------------------------------------------##################################################
GCATTGGCGGTGCCGCTGCCCGCTCAAAGCAGGCCAGACAGCAGTCCGAGGTAAGGTACACAATGGCCACGAAGTTGCCGGTAGCTAAACCCTTGTCTTGTTTATGTTTCTAGGACTCTCAGGACTATAGCTCTTTCAAAACAGTGATCTTCTATTGGATGCT
***************************************************..((.(((....((((.((...)).))))))).))..........................*************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 M040
female body
 V112
male body		 SRR902010
ovaries
 M062
head
 M022
male body		 M059
embryo
 SRR902012
CNS imaginal disc
 GSM444067
head
........................................................................................................TGTTTCTAGGACTCTCAGGACTATAGC................................ 27 0 3 126.00 378 372 2 0 4 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCAAAACAG................... 26 0 3 51.67 155 151 2 0 1 0 0 0 1 0
..............................................................................................................TAGGACTCTCAGGACTATAGCTCTT............................ 25 0 3 28.67 86 73 11 2 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGGACTA.................................... 25 0 3 22.00 66 64 2 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTC.............................. 26 0 3 19.67 59 51 7 1 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTCT............................. 27 0 3 19.33 58 49 6 1 2 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGC................................ 24 0 3 17.33 52 49 2 0 0 1 0 0 0 0
..................................................................................................TGTTTATGTTTCTAGGACTCTCAGGAC...................................... 27 0 3 16.00 48 46 2 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTCTCAGGACTATAG................................. 26 0 3 15.67 47 47 0 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGGAC...................................... 23 0 3 15.67 47 44 1 0 2 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTCTT............................ 28 0 3 15.33 46 28 13 2 3 0 0 0 0 0
.....................................................................................................TTATGTTTCTAGGACTCTCAGGAC...................................... 24 0 3 13.67 41 39 0 1 0 1 0 0 0 0
.......................................................................................................................................TCAAAACAGTGATCTTCTATTGGATGC. 27 0 2 12.50 25 18 1 2 0 1 1 2 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGCTCTTT........................... 26 0 3 9.33 28 26 1 0 0 1 0 0 0 0
...................................................TAAGGTACACAATGGCCACGAAGT........................................................................................ 24 0 2 7.00 14 8 3 3 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGGACT..................................... 24 0 3 6.33 19 17 1 0 0 0 1 0 0 0
.....................................................................................................................................TTTCAAAACAGTGATCTTCTATTGGA.... 26 0 2 6.00 12 5 2 2 3 0 0 0 0 0
.................................................................................................TTGTTTATGTTTCTAGGACTCTCAGG........................................ 26 0 3 6.00 18 18 0 0 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGCTCTTTC.......................... 27 0 3 5.67 17 16 1 0 0 0 0 0 0 0
............................................................................................................TCTAGGACTCTCAGGACTATAGCTCTT............................ 27 0 3 5.33 16 15 0 1 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCT............................... 25 0 3 5.00 15 11 0 1 0 1 2 0 0 0
.....................................................................................................................CTCAGGACTATAGCTCTTTCAAAACAG................... 27 0 3 4.33 13 13 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTCTCAGGACTA.................................... 23 0 3 4.33 13 10 3 0 0 0 0 0 0 0
............................................................................................................TCTAGGACTCTCAGGACTATAGCTCT............................. 26 0 3 4.33 13 11 2 0 0 0 0 0 0 0
....................................................................................................................TCTCAGGACTATAGCTCTTTCAAAACAG................... 28 0 3 4.00 12 12 0 0 0 0 0 0 0 0
..........................................................................................................TTTCTAGGACTCTCAGGACTATAGC................................ 25 0 3 3.67 11 11 0 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAG................................. 23 0 3 3.67 11 11 0 0 0 0 0 0 0 0
...................................................TAAGGTACACAATGGCCACGAAG......................................................................................... 23 0 2 3.50 7 7 0 0 0 0 0 0 0 0
.....................................................................................................TTATGTTTCTAGGACTCTCAGGACTA.................................... 26 0 3 3.33 10 10 0 0 0 0 0 0 0 0
............................................................................................................TCTAGGACTCTCAGGACTATAGCTC.............................. 25 0 3 3.00 9 9 0 0 0 0 0 0 0 0
........................................................................................................................................CAAAACAGTGATCTTCTATTGGATGC. 26 0 2 3.00 6 5 0 1 0 0 0 0 0 0
......................................................................................................................................TTCAAAACAGTGATCTTCTATTGGA.... 25 0 2 2.50 5 5 0 0 0 0 0 0 0 0
....................................................................................................TTTATGTTTCTAGGACTCTCAGGAC...................................... 25 0 3 2.33 7 7 0 0 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGCTCTTTCA......................... 28 0 3 2.33 7 7 0 0 0 0 0 0 0 0
.................................................................................................TTGTTTATGTTTCTAGGACTCTCA.......................................... 24 0 3 2.33 7 7 0 0 0 0 0 0 0 0
..................................................................................................TGTTTATGTTTCTAGGACTCTCAGGA....................................... 26 0 3 2.33 7 7 0 0 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGCTCT............................. 24 0 3 2.33 7 6 1 0 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGC................................ 21 0 3 2.33 7 7 0 0 0 0 0 0 0 0
..................................................................................................TGTTTATGTTTCTAGGACTCTCAGG........................................ 25 0 3 2.00 6 6 0 0 0 0 0 0 0 0
.......................................................................................................................................TCAAAACAGTGATCTTCTATTGGATG.. 26 0 2 2.00 4 2 2 0 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGCTC.............................. 23 0 3 2.00 6 5 1 0 0 0 0 0 0 0
.................................................................................................TTGTTTATGTTTCTAGGACTCTCAGGA....................................... 27 0 3 2.00 6 5 0 1 0 0 0 0 0 0
....................................................................................................................TCTCAGGACTATAGCTCTTTCAAAAC..................... 26 0 3 2.00 6 6 0 0 0 0 0 0 0 0
............................................TCCGAGGTAAGGTACACAATGGC................................................................................................ 23 0 2 2.00 4 1 0 2 0 1 0 0 0 0
.....................................ACAGCAGTCCGAGGTAAGGTACACAA.................................................................................................... 26 0 2 2.00 4 2 0 2 0 0 0 0 0 0
.....................................................................................TAAACCCTTGTCTTGTTTATGTTTCTA................................................... 27 0 3 1.67 5 5 0 0 0 0 0 0 0 0
.................................................................................................TTGTTTATGTTTCTAGGACTCTCAGGAC...................................... 28 0 3 1.67 5 5 0 0 0 0 0 0 0 0
.................................................................................TAGCTAAACCCTTGTCTTGTTTATGT........................................................ 26 0 3 1.67 5 4 1 0 0 0 0 0 0 0
...............................................................................................................AGGACTCTCAGGACTATAGCTCTT............................ 24 0 3 1.67 5 2 3 0 0 0 0 0 0 0
...................................................TAAGGTACACAATGGCCACGAAGTTGCCGG.................................................................................. 30 0 2 1.50 3 3 0 0 0 0 0 0 0 0
........................................GCAGTCCGAGGTAAGGTACACAATGGCC............................................................................................... 28 0 2 1.50 3 1 0 2 0 0 0 0 0 0
..............................................CGAGGTAAGGTACACAATGGCCACGAA.......................................................................................... 27 0 2 1.50 3 3 0 0 0 0 0 0 0 0
...................................................................................................................................TCTTTCAAAACAGTGATCTTCTAT........ 24 0 2 1.50 3 2 1 0 0 0 0 0 0 0
...................................................TAAGGTACACAATGGCCACGAAGTTG...................................................................................... 26 0 2 1.50 3 3 0 0 0 0 0 0 0 0
.........................................................................................................................................AAAACAGTGATCTTCTATTGGATGC. 25 0 2 1.50 3 2 0 0 0 1 0 0 0 0
........................................GCAGTCCGAGGTAAGGTACACAATGGC................................................................................................ 27 0 2 1.50 3 3 0 0 0 0 0 0 0 0
.........................AAAGCAGGCCAGACAGCAGTCCGAGG................................................................................................................ 26 0 2 1.50 3 0 2 1 0 0 0 0 0 0
..........................................................................................................TTTCTAGGACTCTCAGGACTATAGCTC.............................. 27 0 3 1.33 4 4 0 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTCTTTTCAG....................... 33 3 3 1.33 4 4 0 0 0 0 0 0 0 0
.........................................................................................................GTTTCTAGGACTCTCAGGACTATAGC................................ 26 0 3 1.33 4 4 0 0 0 0 0 0 0 0
.......................................................................................................ATGTTTCTAGGACTCTCAGGACTATAG................................. 27 0 3 1.33 4 4 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTCTCAGGACTATA.................................. 25 0 3 1.33 4 4 0 0 0 0 0 0 0 0
.................................................................................................................GACTCTCAGGACTATAGCTCTTTCAA........................ 26 0 3 1.33 4 4 0 0 0 0 0 0 0 0
..........................................................................................................TTTCTAGGACTCTCAGGACTATAGCTCT............................. 28 0 3 1.33 4 3 0 1 0 0 0 0 0 0
.......................................................................................................................CAGGACTATAGCTCTTTCAAAACAG................... 25 0 3 1.33 4 4 0 0 0 0 0 0 0 0
..........TGCCGCTGCCCGCTCAAAGCAGG.................................................................................................................................. 23 0 2 1.00 2 0 2 0 0 0 0 0 0 0
.......................................................................................................................CAGGACTATAGCTCTTTCAAAACAGTGA................ 28 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...............................................GAGGTAAGGTACACAATGGCCACGAAG......................................................................................... 27 0 2 1.00 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................AAACAGTGATCTTCTATTGGATGC. 24 0 2 1.00 2 2 0 0 0 0 0 0 0 0
............................................TCCGAGTTAAGGTACACAATGGCC............................................................................................... 24 1 2 1.00 2 2 0 0 0 0 0 0 0 0
...........................................................................TGCCGGTAGCTAAACCCTTGTCTTGTT............................................................. 27 0 3 1.00 3 1 2 0 0 0 0 0 0 0
.........................................................................................................TGTTCTAGGACTCTCAGGACTATAGC................................ 26 2 3 1.00 3 3 0 0 0 0 0 0 0 0
....................................................AAGGTACACAATGGCCACGAAGTTGCCGG.................................................................................. 29 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...................................AGACAGCAGTCCGAGGTAAGGTACA....................................................................................................... 25 0 2 1.00 2 0 0 2 0 0 0 0 0 0
..........TGCCGCTGCCCGCTCAAAGCAGGC................................................................................................................................. 24 0 2 1.00 2 1 0 0 0 1 0 0 0 0
...............................................................TGGCCACGAAGTTGCCGGTAGCTAAAC......................................................................... 27 0 2 1.00 2 0 2 0 0 0 0 0 0 0
.............................................................................................................................TATAGCTCTTTCAAAACAGTGATC.............. 24 0 2 1.00 2 2 0 0 0 0 0 0 0 0
.................................................................................TAGCTAAACCCTTGTCTTGTTTATGTT....................................................... 27 0 3 1.00 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................TATAGCTCTTTCAAAACAGTGATCTTC........... 27 0 2 1.00 2 1 0 1 0 0 0 0 0 0
......................................................................................................................................TTCAAAACAGTGATCTTCTATTGGATGC. 28 0 2 1.00 2 0 1 0 0 0 1 0 0 0
...................................................TAAGGTACACAATGGCCACGAAGTT....................................................................................... 25 0 2 1.00 2 1 1 0 0 0 0 0 0 0
.....AACAGTGCCGCTGCCCGCTCAAAGCAGG.................................................................................................................................. 28 3 2 1.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................................TCGGAGGACTCTCAGGACTATAGCTC.............................. 26 3 3 1.00 3 3 0 0 0 0 0 0 0 0
.............................................................................................................................TATAGCTCTTTCAAAACAGTGATCT............. 25 0 2 1.00 2 0 1 1 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGGACTATAGC................................ 29 0 3 1.00 3 3 0 0 0 0 0 0 0 0
...................................................TAAGGTACACAATGGCCACGAAGTTGC..................................................................................... 27 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................................TCCGAGGACTCTCAGGACTATAGCTC.............................. 26 2 3 1.00 3 3 0 0 0 0 0 0 0 0
..........................................................................TTGCCGGTAGCTAAACCCTTGTCT................................................................. 24 0 3 1.00 3 1 0 2 0 0 0 0 0 0
.......................................................................................................................................TCAAAACAGTGATCTTCTATTGGATGCT 28 0 2 1.00 2 0 0 2 0 0 0 0 0 0
..........................................................................................................CTTCTAGGACTCTCAGGACTATAGC................................ 25 1 3 1.00 3 3 0 0 0 0 0 0 0 0
..........TGCCGCTGCCCGCTCAAAGCAGGCC................................................................................................................................ 25 0 2 1.00 2 0 2 0 0 0 0 0 0 0
.....................................................................................................TTATGTTTCTAGGACTCTCAGGACC..................................... 25 1 3 1.00 3 3 0 0 0 0 0 0 0 0
.............................................................................................TGTCTTGTTTATGTTTCTAGGACTC............................................. 25 0 3 1.00 3 3 0 0 0 0 0 0 0 0
...........................................................................................................TCGGAGGACTCTCAGGACTATAGCTCTT............................ 28 3 3 0.67 2 2 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTCTCAGGACTATAGCA............................... 28 1 3 0.67 2 2 0 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGGA....................................... 22 0 3 0.67 2 2 0 0 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCAAAAC..................... 24 0 3 0.67 2 2 0 0 0 0 0 0 0 0
...........................................................................TGCCGGTAGCTAAACCCTTGTCTT................................................................ 24 0 3 0.67 2 0 1 1 0 0 0 0 0 0
..........................................................................TTGCCGGTAGCTAAACCCTTGTCTTG............................................................... 26 0 3 0.67 2 1 1 0 0 0 0 0 0 0
.............................................................................CCGGTAGCTAAACCCTTGTCTTGTT............................................................. 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0
....................................................................................................TTTATGTTTCTAGGACTCTCAGGA....................................... 24 0 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................................................TCTAGGACTCTCAGGACTATAGC................................ 23 0 3 0.67 2 2 0 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGGACA..................................... 24 1 3 0.67 2 2 0 0 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTAT................................... 18 0 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................................................TCTAGGACTCTCAGGACTATAGCTCTC............................ 27 1 3 0.67 2 2 0 0 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGCTCTTA........................... 26 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................................TTGTCTTGTTTATGTTTCTAGGA................................................ 23 0 3 0.67 2 2 0 0 0 0 0 0 0 0
...................................................................................................................CTCTCAGGACTATAGCTCTTTCAAA....................... 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0
..........................................................................................................TTTCTAGGACTCTCAGGACTATAGCTCTT............................ 29 0 3 0.67 2 2 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTCTCAGGAC...................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAG......................................... 20 0 3 0.67 2 2 0 0 0 0 0 0 0 0
................................................................................................CTTGTTTATGTTTCTAGGACTCTGT.......................................... 25 2 3 0.67 2 2 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTCTCAGGACT..................................... 22 0 3 0.67 2 1 1 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTCTAAT.......................... 30 3 3 0.67 2 2 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTTTCAGGACTATAGC................................ 27 1 3 0.67 2 2 0 0 0 0 0 0 0 0
.................................................................................................CTGTTTATGTTTCTAGGACTCTCAGGAC...................................... 28 1 3 0.67 2 2 0 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTCAA............................ 28 2 3 0.67 2 2 0 0 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCAAAACAGTG................. 28 0 3 0.67 2 1 1 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGGACCC.................................... 25 2 3 0.67 2 2 0 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGG........................................ 21 0 3 0.67 2 1 0 0 0 1 0 0 0 0
...................................................................................................................CTCTCAGGACTATAGCTCTTTCAAAACAG................... 29 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.................................................................................................TTGTTTATGTTTCTAGGACTCTCAG......................................... 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0
...........................................................................TGCCGGTAGCTAAACCCTTGTCT................................................................. 23 0 3 0.67 2 0 0 1 1 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTCTCAGGACTATAA................................. 26 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................................................TCTAGGACTCTCAGGACTATAG................................. 22 0 3 0.67 2 2 0 0 0 0 0 0 0 0
.....................................................................................................TTATGTTTCTAGGACTCTCAGGACT..................................... 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGGACTATA.................................. 27 0 3 0.67 2 2 0 0 0 0 0 0 0 0
...............................................................TGGCCACGAAGTTGCCGGTAGCTAAA.......................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................TCCGAGGTAAGGTACACAATGGCCA.............................................................................................. 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................TCAAAACAGTGATCTTCTATTGGATGG. 27 1 2 0.50 1 0 0 0 0 0 1 0 0 0
.................GCCCGCTCAAAGCAGGCCAGACAGC......................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................ACAGCAGTCCGAGGTAAGGTACA....................................................................................................... 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.......................................................................................................................................TCAAAACAGTGATCTTCTAT........ 20 0 2 0.50 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................TAGCTCTTTCAAAACAGTGATCTTCT.......... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................AGACAGCAGTCCGAGGTAAGGTAC........................................................................................................ 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0
........................................................TACACAATGGCCACGAAGTTGCCGGT................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................CAGACAGCAGTCCGAGGTAAGGTAC........................................................................................................ 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0
......................................CAGCAGTCCGAGGTAAGGTACACA..................................................................................................... 24 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................TATAGCTCTTTCAAAACAGTGAT............... 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0
................................GCCAGACAGCAGTCCGAGGTAAGGTA......................................................................................................... 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................TAGCTCTTTCAAAACAGTGATCTTC........... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................AGACAGCAGTCCGAGGTAAGG........................................................................................................... 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0
............................GCAGGCCAGACAGCAGTCCGAGG................................................................................................................ 23 0 2 0.50 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................TTCAAAACAGTGATCTTCTATTGGAT... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..........TGCCGCTGCCCGCTCAAAGCAGGCCA............................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0 0 0 0 0
...................................................................CACGAAGTTGCCGGTAGCTAAACCCTTG.................................................................... 28 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.........................................CAGTCCGAGGTAAGGTACACAATGGC................................................................................................ 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0
....................................................................ACGAAGTTGCCGGTGGCTAAACCCTTGTC.................................................................. 29 1 2 0.50 1 0 0 1 0 0 0 0 0 0
....................CGCTCAAAGCAGGCCAGACAGCAG....................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................................................TGGCCACGAAGTTGCCGGTAGCTA............................................................................ 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0
..............................................................ATGGCCACGAAGTTGCCGGTA................................................................................ 21 0 2 0.50 1 0 1 0 0 0 0 0 0 0
...................................................................CACGAAGTTGCCGGTAGCTAAACCCT...................................................................... 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0
...................................................TAAGGTACACAATGGCCACGAAGTCCC..................................................................................... 27 2 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................CGAGGTAAGGCACACAATGGC................................................................................................ 21 1 2 0.50 1 1 0 0 0 0 0 0 0 0
......................ATCAAAGCAGGCCAGACAGCAGTCCG................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................TATAGCTCTTTCAAAACAGTGATCTT............ 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................TGATCTTCTATTGGATGCT 19 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................AATGGCCACGAAGTTGCCGGTAG............................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
....................CGCTCAAAGCAGGCCAGACAGCAGTC..................................................................................................................... 26 0 2 0.50 1 0 0 1 0 0 0 0 0 0
.............................................CCGAGGTAAGGTACACAATGGCCA.............................................................................................. 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0
..........TGCCGCTGCCCGCTCAAAGCAGGCCAG.............................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................AAACAGTGATCTTCTATTGGATGCT 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................AAACAGTGATCTTCTATTGG..... 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0
................TGCCCGCTCAAAGCAGGCCAGACAGC......................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............................GCAGGCCAGACAGCAGTCCGA.................................................................................................................. 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................AAACAGTGATCTTCTATTGGATGCC 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................CGAGGTAAGGTACACAATGGC................................................................................................ 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0
................TGCCCGCTCAAAGCAGGCCAGACAG.......................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
....................................................AAGGTACACAATGGCCACGAAGTTGC..................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................CAGGCCAGACAGCAGTCCGAGGT............................................................................................................... 23 0 2 0.50 1 0 0 0 0 1 0 0 0 0
......................................CAGCAGTCCGAGGTAAGGTACACAA.................................................................................................... 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................TTCAAAACAGTGATCTTCTATTGGATG.. 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................ACAGTGATCTTCTATTGGAT... 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0
..........TGCCGCTGCCCGCTCAAAGCAGGCCT............................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0 0 0 0 0
...................................AGACAGCAGTCCGAGGTAAGGTA......................................................................................................... 23 0 2 0.50 1 0 0 1 0 0 0 0 0 0
............................GCAGGCCAGACAGCAGTCCGAGGTA.............................................................................................................. 25 0 2 0.50 1 0 1 0 0 0 0 0 0 0
..................CCCGCTCAAAGCAGGCCAGACAGCAG....................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................CAGGCCAGACAGCAGTCCGAGGTAAGG........................................................................................................... 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0
..................CCCGCTCAAAGCAGGCCAGACAGAAG....................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................TCAAAACAGTGATCTTCTATTGGA.... 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0
............................................TCCGAGGTAAGGTACACAATGGCCAC............................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................TCAAAGCAGGCCAGACAGCAGTCCGAG................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................CCGAGGTAAGGTACACAATGGCCAC............................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
......................................CAGCAGTCCGAGGTAAGGTACACAATG.................................................................................................. 27 0 2 0.50 1 0 0 1 0 0 0 0 0 0
..................................CAGACAGCAGTCCGAGGTAAGG........................................................................................................... 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0
................TGCCCGCTCAAAGCAGGCCAGACAGCAGT...................................................................................................................... 29 0 2 0.50 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................TAGCTCTTTCAAAACAGTGATCTTCTAT........ 28 0 2 0.50 1 0 1 0 0 0 0 0 0 0
....................CGCTCAAAGCAGGCCAGACAGCAGT...................................................................................................................... 25 0 2 0.50 1 0 0 1 0 0 0 0 0 0
...........................................................................................................TCCGAGGACTCTCAGGACTATAGC................................ 24 2 3 0.33 1 1 0 0 0 0 0 0 0 0
......................CTCAAAGCAGGCCAGACAGCAG....................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
............................GCAGGCCAGACAGCAGTCCGAGGAC.............................................................................................................. 25 2 3 0.33 1 0 0 0 0 1 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGAA............................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................TGCCGGTAGCTAAACCCTTGTCC................................................................. 23 1 3 0.33 1 0 0 1 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGCTCTA............................ 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTCA............................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................................TGTTTATGTTTCTAGGACTCTCAGGACC..................................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................TGCCGGTAGCTAAACCCTTGTCTTGTCC............................................................ 28 2 3 0.33 1 0 0 1 0 0 0 0 0 0
..........................................................................TTGCCGGTAGCTAAACCCTTGTCTTGTCC............................................................ 29 2 3 0.33 1 0 0 1 0 0 0 0 0 0
.....................................................................................TAAACCCTTGTCTCGTTTATGTTTCTA................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................................................................GTTTATGTTTCTAGGACTCTCAGGAC...................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................................................................CGGAGGACTCTCAGGACTATAGCT............................... 24 3 3 0.33 1 0 0 0 0 0 0 0 1 0
...........................................................................TGCCGGTAGCTAAACCCTTGTCTTGT.............................................................. 26 0 3 0.33 1 0 1 0 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCAAAACAGGGTA............... 30 3 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................TCAAAGCAGGCCAGACAGCAG....................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................................................................TCTAGGACTCTCAGGACTCTAGCTCTT............................ 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................................................................................TAAACCCTTGTCTTGTTTATGTCC...................................................... 24 2 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................CATGTTTCTAGGACTCTCAGGACTATAGC................................ 29 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................................................................ATGTTTCTAGGACTCTCAGGACTA.................................... 24 0 3 0.33 1 0 1 0 0 0 0 0 0 0
..........................................................................TTGCCGGTAGCTAAACCCTTGT................................................................... 22 0 3 0.33 1 0 0 1 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCCC........................ 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTCTCAGGGCTATAGC................................ 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................................................TCTCAGGACTATAGCTCTTTCAACAG..................... 26 2 3 0.33 1 1 0 0 0 0 0 0 0 0
................................................................................................................GGACTCTCAGGACTATAGCTC.............................. 21 0 3 0.33 1 0 1 0 0 0 0 0 0 0
...............................................................................................................AGGACTCTCAGGACTATAGCTCTTTCA......................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TTATGTTTCTAGGACTCTCAGG........................................ 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTCTTA........................... 29 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TTTCTAGGACTCTCAGGACTATAG................................. 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................TATGGTTCTAGGACTCTCAGGAC...................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................................CTAGGACTCTCAGGACTATAGCTCTT............................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGGACTAAA.................................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTTTCAGGAC...................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................................................................ATGTTTCTAGGACTCTCAGGACTATAGC................................ 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0
....................................................................................................TTTATGTTTCTAGGACTCTCAGT........................................ 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................................................................................................ATATGTTTCTAGGACTCTCAGGAC...................................... 24 1 3 0.33 1 0 1 0 0 0 0 0 0 0
........................CAAAGCAGGCCAGACAGCAGT...................................................................................................................... 21 0 3 0.33 1 0 0 1 0 0 0 0 0 0
..........................................................................................................TTTCTAGGACTCTCAGGACTATAGATCT............................. 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTCTCAGGACTATAGCTC.............................. 29 0 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGCCTCTCAGGACTATAGC................................ 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................................................................TCTAGGACTCTCAGGACTATAGCTCTTTCAG........................ 31 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATA.................................. 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTAT............................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TTTTGACTCTCAGGACTATAGCTCTTT........................... 27 3 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................................................................................ATATTGTTTATGTTTCTAGGACTCTCAGGACAA.................................... 33 3 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................................TGTTTATGTTTCTAGGACTCTCAGGACA..................................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................TCCGAGGACTCTCAGGACTATAGCTCTT............................ 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................................................................................TAAACCCTTGTCTTGTTTATGTTTC..................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGCTCTTTCC......................... 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATAGCCC.............................. 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCAAAACC.................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................TGCCGGTAGCTAAACCCTTGTC.................................................................. 22 0 3 0.33 1 0 0 0 0 0 0 0 0 1
........................................................................................................TGTTTCTAGCACTCTCAGGACTATAGC................................ 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TTAGGACTCTCAGGACTATAG................................. 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCCCAGGACTA.................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................CAGGACTATAGCTCTTTCAAAACAGTG................. 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................................GTTTCTAGGACTCTCAGGACTATAG................................. 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................TAGCTAAACCCTTGTCTTGA.............................................................. 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................TGTCTTGTTTATGTTTCTAGGACTCT............................................ 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TTATGTTTCCAGGACTCTCAGGACTA.................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCAAAACAGT.................. 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCAAAACAGAT................. 28 2 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................TATGTTTCTAGGACTCTCAGGACTAT................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................AAACCCTTGTCTTGTTTATGTTTCT.................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCAAAACAC................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................................GCCGGTAGCTAAACCCTTG.................................................................... 19 0 3 0.33 1 0 1 0 0 0 0 0 0 0
............................................................................................................................CTATAGCTCTTTCAAAACAG................... 20 0 3 0.33 1 1 0 0 0 0 0 0 0 0
GCATTGCCGGTGCCGCTGCCC.............................................................................................................................................. 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0
.....................................................................................................TTATGTTTCTAGGACTCTCAGGACTAA................................... 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................................GTTTCTAGGACTCTCAGGACTATA.................................. 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................................TAGCTAAACCCTTGTCTTGT.............................................................. 20 0 3 0.33 1 0 1 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGTCTATAGCTCT............................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................TGCCGGTAGCTAAACCCTTGTCTAA............................................................... 25 2 3 0.33 1 1 0 0 0 0 0 0 0 0
..........................................................................TTGCCGGTAGCTAAACCCTTGTCTTGT.............................................................. 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................CTCAGGACTATAGCTCTTTCAAAACA.................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
..................................................................................................................ACTCTCAGGACTATAGCTCTTTCAAA....................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAAGACTCTCAGGACTATAGC................................ 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTTTTTCAAAACAG................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..........................................................................TTGCCGGTAGCTAAACCCTTGTCTT................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0
................................................................................................................GTACTCTCAGGACTATAGCTC.............................. 21 1 3 0.33 1 0 0 0 0 0 0 1 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCAAAACAGA.................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTTCAAAT...................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0
........................................................................................................TGTTTCTAGGACTCTCAGGACTAT................................... 24 0 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................................................................CCGAGGACTCTCAGGACTATAGCTC.............................. 25 2 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGATTCTCAGGACTATAGCTCTT............................ 28 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TTATGTTTCTAGGACTCTCAGGACA..................................... 25 1 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................................................TTGTCTTGTTTATGTTTCTAGGACTC............................................. 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTCTAA........................... 29 2 3 0.33 1 1 0 0 0 0 0 0 0 0
.............................................................................................................CTAGGACTCTCAGGACTATAGCTCT............................. 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0
...........................................................................................................TTCTAGGACTCTCAGGACTATAGCTCC............................. 27 1 3 0.33 1 1 0 0 0 0 0 0 0 0
......................CTCAAAGCAGGCCAGACAGCA........................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................................................TCAGGACTATAGCTCTTCC.......................... 19 1 4 0.25 1 1 0 0 0 0 0 0 0 0
..............................................................................................................TAGGACTCTCAGGACTATC.................................. 19 1 4 0.25 1 1 0 0 0 0 0 0 0 0
................................................................................................CTTGTTTATGTTCCTTGGA................................................ 19 2 10 0.10 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CGTAACCGCCACGGCGACGGGCGAGTTTCGTCCGGTCTGTCGTCAGGCTCCATTCCATGTGTTACCGGTGCTTCAACGGCCATCGATTTGGGAACAGAACAAATACAAAGATCCTGAGAGTCCTGATATCGAGAAAGTTTTGTCACTAGAAGATAACCTACGA
***************************************************..((.(((....((((.((...)).))))))).))..........................*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body		 SRR902010
ovaries
 M062
head
......................................GTCGTCAGGCTCCATTCCATGTG...................................................................................................... 23 0 2 1.50 3 2 1 0 0 0
..........................................................................................................................................TTTGTCACTAGAAGATAACCTACG. 24 0 2 1.50 3 2 0 1 0 0
...........CGGCGACGGGCGAGTTTCGT.................................................................................................................................... 20 0 2 1.50 3 0 3 0 0 0
.......GCCACGGCGACGGGCGAGTTTCGT.................................................................................................................................... 24 0 2 1.00 2 0 1 1 0 0
........................................CGTCAGGCTCCATTCCATGTG...................................................................................................... 21 0 2 1.00 2 0 2 0 0 0
..........................................................................................................................................TTTGTCACTAGAAGATAACCTAC.. 23 0 2 1.00 2 2 0 0 0 0
..........ACGGCGACGGGCGAGTTTCGT.................................................................................................................................... 21 0 2 1.00 2 0 0 0 2 0
.........................................................................................GGGAACAGAACAAATACAAAGATCC................................................. 25 0 3 1.00 3 1 2 0 0 0
........................................................................................TGGGAACAGAACAAATACAAAGAT................................................... 24 0 3 0.67 2 0 1 0 1 0
................................................................................................GAACAAATACAAAGATCCTGAGAG........................................... 24 0 3 0.67 2 1 1 0 0 0
............................................................GTTACCGGTGCTTCAACGGCCATCGATT........................................................................... 28 0 2 0.50 1 1 0 0 0 0
..........................................................GTGTTACCGGTGCTTCAACGGCCAT................................................................................ 25 0 2 0.50 1 1 0 0 0 0
................................CGGTCTGTCGTCAGGCTCCATT............................................................................................................. 22 0 2 0.50 1 0 0 1 0 0
..................................................................GGTGCTTCAACGGCCATCGAT............................................................................ 21 0 2 0.50 1 0 0 1 0 0
...................................................................................................................................AGAAAGTTTTGTCACTAGAAGATAAC...... 26 0 2 0.50 1 0 1 0 0 0
....................................................................TGCTTCAACGGCCATCGATTTGG........................................................................ 23 0 2 0.50 1 0 1 0 0 0
...........................................................................................................................................TTGTCACTAGAAGATAACCTACG. 23 0 2 0.50 1 1 0 0 0 0
.....................................TGTCGTCAGGCTCCATTCCATGT....................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
..................................................................GGTGCTTCAACGGCCATCGATTT.......................................................................... 23 0 2 0.50 1 0 1 0 0 0
......................................GTCGTCAGGCTCCATTCCAT......................................................................................................... 20 0 2 0.50 1 0 1 0 0 0
.............................GTCCGGTCTGTCGTCAGGCTC................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0
..............................TCCGGTCTGTCGTCAGGCTCCAT.............................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
...............................................................................................AGAACAAATACAAAGATCCTGAG............................................. 23 0 3 0.33 1 1 0 0 0 0
..................................................................................................ACAAATACAAAGATCCTGAGAGTCCTGAT.................................... 29 0 3 0.33 1 0 0 1 0 0
.......................................................................................ATGGGAACAGAACAAATACAAAGAT................................................... 25 1 3 0.33 1 1 0 0 0 0
.........................................................................................................................CCTGATATCGAGAAAGTTTTG..................... 21 0 3 0.33 1 1 0 0 0 0
..............................................................................................CAGAACAAATACAAAGATCCTGAGAG........................................... 26 0 3 0.33 1 1 0 0 0 0
..................................................................................................................AAAGAGTCCTGATATCGAGAAAGTTTTGT.................... 29 2 3 0.33 1 0 0 1 0 0
.............................................................................GGCCATCGATTTGGGAACAGA................................................................. 21 0 3 0.33 1 1 0 0 0 0
................................................................................................................CCTGAGAGTCCTGATATCGAGAAAG.......................... 25 0 3 0.33 1 1 0 0 0 0
.......................................................................................TTGGGAACAGAACAAATACAAAGATG.................................................. 26 1 3 0.33 1 1 0 0 0 0
..........................................................................................GGAACAGCACAAATACAAAGAT................................................... 22 1 3 0.33 1 0 0 0 0 1
................................................................................................................CCTGAGAGTCCTGATATCGAGAA............................ 23 0 3 0.33 1 0 0 1 0 0
.......................................................................................TTGGGAACAGAACAAATACAAAGAT................................................... 25 0 3 0.33 1 1 0 0 0 0
.............................................................................................ACAGAACAAATACAAAGATCCTGAGAG........................................... 27 0 3 0.33 1 1 0 0 0 0
................................................................................CATCGATTTGGGAACAGAACAAA............................................................ 23 0 3 0.33 1 1 0 0 0 0
................................................................................CATCGATTTGGGAACAGAACA.............................................................. 21 0 3 0.33 1 0 0 1 0 0
............................................................................................AACAGAACAAAAACAAAGATCATT............................................... 24 3 9 0.11 1 0 0 0 1 0
..................................................................................TCGATTTCGAAACAGAAGAAA............................................................ 21 3 13 0.08 1 1 0 0 0 0
.......GGCACGGCGAAGGGCGCGT......................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_singleton_3286:1040-1202 - dps_2358 GCATTGGCGGTGCCGCTGCCCGCTCAAAGCAGGCCAGACAGCAGTCCGAGGTAAGGTACACAATGGCCACGAAGTTGCCGGTAGCTAAACCC-TTGTCTTGTTTATGTTTCTAGGACTCTCAGG---ACTATAGCTCTTTCAAAACAGTGATCTTCTATTGGATGC---------T
droPer2 scaffold_21:189033-189195 + TC----AAGGTGCGACCGGCATCTAAATTGGTACTTTGCAGATTCCCGTCGGAAAGCGCGCGATTGACAATTGATTTGAAATATATGTAAAACCAATTCCATTTATATTTATGCATATTTATTTAAGTATATATATAT---------TTTTTCTTATATTGTATATTTAGATACAT
droWil2 scf2_1100000004830:473570-473613 - AT----------------------------------------------------------------------------------------------------ACATACCTATGTATATTTATGTACATATGTATGTTT---------TTTTTC-----------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GCATTGGCGGTGCCGCTGCCCGCTCAAAGCAGGCCAGACAGCAGTCCGAGGTAAGGTACACAATGGCCACGAAGTTGCCGGTAGCTAAACCC-TTGTCTTGTTTATGTTTCTAGGACTCTCAGG---ACTATAGCTCTTTCAAAACAGTGATCTTCTATTGGATGC---------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................TGTTTCTAGGACTCTCAGG---ACTATAGC.........................................273126.00378020000043720
.......................................................................................................................TCAGG---ACTATAGCTCTTTCAAAACAG............................26351.67155020000011511
...............................................................................................................TAGGACTCTCAGG---ACTATAGCTCTT.....................................25328.6786011000020730
.......................................................................................................TATGTTTCTAGGACTCTCAGG---ACTA.............................................25322.006602000000640
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGCTC.......................................26319.675907000010510
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGCTCT......................................27319.335806000012490
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGC.........................................24317.335202010000490
...................................................................................................TGTTTATGTTTCTAGGACTCTCAGG---AC...............................................27316.004802000000460
.........................................................................................................TGTTTCTAGGACTCTCAGG---ACTATAG..........................................26315.674700000000470
.......................................................................................................TATGTTTCTAGGACTCTCAGG---AC...............................................23315.674701000002440
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGCTCTT.....................................28315.3346013000023280
......................................................................................................TTATGTTTCTAGGACTCTCAGG---AC...............................................24313.674100010010390
...........................................................................................................................................TCAAAACAGTGATCTTCTATTGGATGC---------.27212.502511210020180
...............................................................................................................TAGGACTCTCAGG---ACTATAGCTCTTT....................................2639.332801010000260
...................................................TAAGGTACACAATGGCCACGAAGT.....................................................................................................2427.00140300003080
.......................................................................................................TATGTTTCTAGGACTCTCAGG---ACT..............................................2436.331911000000170
.........................................................................................................................................TTTCAAAACAGTGATCTTCTATTGGA.............2626.00120200002350
..................................................................................................TTGTTTATGTTTCTAGGACTCTCAGG---.................................................2636.001800000000180
...............................................................................................................TAGGACTCTCAGG---ACTATAGCTCTTTC...................................2735.671701000000160
.............................................................................................................TCTAGGACTCTCAGG---ACTATAGCTCTT.....................................2735.331600000010150
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGCT........................................2535.001520010010110
......................................................................................................................CTCAGG---ACTATAGCTCTTTCAAAACAG............................2734.331300000000130
.........................................................................................................TGTTTCTAGGACTCTCAGG---ACTA.............................................2334.331303000000100
.............................................................................................................TCTAGGACTCTCAGG---ACTATAGCTCT......................................2634.331302000000110
.....................................................................................................................TCTCAGG---ACTATAGCTCTTTCAAAACAG............................2834.001200000000120
...........................................................................................................TTTCTAGGACTCTCAGG---ACTATAGC.........................................2533.671100000000110
............................................................................................................TTCTAGGACTCTCAGG---ACTATAG..........................................2333.671100000000110
...................................................TAAGGTACACAATGGCCACGAAG......................................................................................................2323.5070000000070
......................................................................................................TTATGTTTCTAGGACTCTCAGG---ACTA.............................................2633.331000000000100
.............................................................................................................TCTAGGACTCTCAGG---ACTATAGCTC.......................................2533.0090000000090
............................................................................................................................................CAAAACAGTGATCTTCTATTGGATGC---------.2623.0060000001050
..........................................................................................................................................TTCAAAACAGTGATCTTCTATTGGA.............2522.5050000000050
.....................................................................................................TTTATGTTTCTAGGACTCTCAGG---AC...............................................2532.3370000000070
...............................................................................................................TAGGACTCTCAGG---ACTATAGCTCTTTCA..................................2832.3370000000070
..................................................................................................TTGTTTATGTTTCTAGGACTCTCA......................................................2432.3370000000070
...................................................................................................TGTTTATGTTTCTAGGACTCTCAGG---A................................................2632.3370000000070
...............................................................................................................TAGGACTCTCAGG---ACTATAGCTCT......................................2432.3370100000060
...............................................................................................................TAGGACTCTCAGG---ACTATAGC.........................................2132.3370000000070
...................................................................................................TGTTTATGTTTCTAGGACTCTCAGG---.................................................2532.0060000000060
...........................................................................................................................................TCAAAACAGTGATCTTCTATTGGATG...........2622.0040200000020
...............................................................................................................TAGGACTCTCAGG---ACTATAGCTC.......................................2332.0060100000050
..................................................................................................TTGTTTATGTTTCTAGGACTCTCAGG---A................................................2732.0060000001050
.....................................................................................................................TCTCAGG---ACTATAGCTCTTTCAAAAC..............................2632.0060000000060
............................................TCCGAGGTAAGGTACACAATGGC.............................................................................................................2322.0040001002010
.....................................ACAGCAGTCCGAGGTAAGGTACACAA.................................................................................................................2622.0040000002020
.....................................................................................TAAACCC-TTGTCTTGTTTATGTTTCTA...............................................................2731.6750000000050
..................................................................................................TTGTTTATGTTTCTAGGACTCTCAGG---AC...............................................2831.6750000000050
.................................................................................TAGCTAAACCC-TTGTCTTGTTTATGT....................................................................2631.6750100000040
................................................................................................................AGGACTCTCAGG---ACTATAGCTCTT.....................................2431.6750300000020
...................................................TAAGGTACACAATGGCCACGAAGTTGCCGG...............................................................................................3021.5030000000030
........................................GCAGTCCGAGGTAAGGTACACAATGGCC............................................................................................................2821.5030000002010
..............................................CGAGGTAAGGTACACAATGGCCACGAA.......................................................................................................2721.5030000000030
.......................................................................................................................................TCTTTCAAAACAGTGATCTTCTAT.................2421.5030100000020
...................................................TAAGGTACACAATGGCCACGAAGTTG...................................................................................................2621.5030000000030
.............................................................................................................................................AAAACAGTGATCTTCTATTGGATGC---------.2521.5030001000020
........................................GCAGTCCGAGGTAAGGTACACAATGGC.............................................................................................................2721.5030000000030
.........................AAAGCAGGCCAGACAGCAGTCCGAGG.............................................................................................................................2621.5030200001000
...........................................................................................................TTTCTAGGACTCTCAGG---ACTATAGCTC.......................................2731.3340000000040
..........................................................................................................GTTTCTAGGACTCTCAGG---ACTATAGC.........................................2631.3340000000040
........................................................................................................ATGTTTCTAGGACTCTCAGG---ACTATAG..........................................2731.3340000000040
.........................................................................................................TGTTTCTAGGACTCTCAGG---ACTATA...........................................2531.3340000000040
..................................................................................................................GACTCTCAGG---ACTATAGCTCTTTCAA.................................2631.3340000000040
...........................................................................................................TTTCTAGGACTCTCAGG---ACTATAGCTCT......................................2831.3340000001030
........................................................................................................................CAGG---ACTATAGCTCTTTCAAAACAG............................2531.3340000000040
..........TGCCGCTGCCCGCTCAAAGCAGG...............................................................................................................................................2321.0020200000000
........................................................................................................................CAGG---ACTATAGCTCTTTCAAAACAGTGA.........................2821.0020000000020
...............................................GAGGTAAGGTACACAATGGCCACGAAG......................................................................................................2721.0020000000020
..............................................................................................................................................AAACAGTGATCTTCTATTGGATGC---------.2421.0020000000020
...........................................................................TGCCGGTAGCTAAACCC-TTGTCTTGTT.........................................................................2731.0030200000010
....................................................AAGGTACACAATGGCCACGAAGTTGCCGG...............................................................................................2921.0020000000020
...................................AGACAGCAGTCCGAGGTAAGGTACA....................................................................................................................2521.0020000002000
..........TGCCGCTGCCCGCTCAAAGCAGGC..............................................................................................................................................2421.0020001000010
...............................................................TGGCCACGAAGTTGCCGGTAGCTAAAC......................................................................................2721.0020200000000
.................................................................................................................................TATAGCTCTTTCAAAACAGTGATC.......................2421.0020000000020
.................................................................................TAGCTAAACCC-TTGTCTTGTTTATGTT...................................................................2731.0030000000030
.................................................................................................................................TATAGCTCTTTCAAAACAGTGATCTTC....................2721.0020000001010
..........................................................................................................................................TTCAAAACAGTGATCTTCTATTGGATGC---------.2821.0021100000000
...................................................TAAGGTACACAATGGCCACGAAGTT....................................................................................................2521.0020100000010
.................................................................................................................................TATAGCTCTTTCAAAACAGTGATCT......................2521.0020100001000
.......................................................................................................TATGTTTCTAGGACTCTCAGG---ACTATAGC.........................................2931.0030000000030
...................................................TAAGGTACACAATGGCCACGAAGTTGC..................................................................................................2721.0020000000020
..........................................................................TTGCCGGTAGCTAAACCC-TTGTCT.............................................................................2431.0030000002010
...........................................................................................................................................TCAAAACAGTGATCTTCTATTGGATGC---------T2821.0020000002000
..........TGCCGCTGCCCGCTCAAAGCAGGCC.............................................................................................................................................2521.0020200000000
......................................................................................................TTATGTTTCTAGGACTCTCAGG---ACC..............................................2531.0030000000030
..............................................................................................TGTCTTGTTTATGTTTCTAGGACTC.........................................................2531.0030000000030
.........................................................................................................TGTTTCTAGGACTCTCAGG---ACTATAGCA........................................2830.6720000000020
.......................................................................................................TATGTTTCTAGGACTCTCAGG---A................................................2230.6720000000020
.......................................................................................................................TCAGG---ACTATAGCTCTTTCAAAAC..............................2430.6720000000020
...........................................................................TGCCGGTAGCTAAACCC-TTGTCTT............................................................................2430.6720100001000
..........................................................................TTGCCGGTAGCTAAACCC-TTGTCTTG...........................................................................2630.6720100000010
.............................................................................CCGGTAGCTAAACCC-TTGTCTTGTT.........................................................................2530.6720000000020
.....................................................................................................TTTATGTTTCTAGGACTCTCAGG---A................................................2430.6720000000020
.............................................................................................................TCTAGGACTCTCAGG---ACTATAGC.........................................2330.6720000000020
.......................................................................................................TATGTTTCTAGGACTCTCAGG---ACA..............................................2430.6720000000020
...............................................................................................................TAGGACTCTCAGG---ACTAT............................................1830.6720000000020
.............................................................................................................TCTAGGACTCTCAGG---ACTATAGCTCTC.....................................2730.6720000000020
...............................................................................................................TAGGACTCTCAGG---ACTATAGCTCTTA....................................2630.6720000000020
.............................................................................................TTGTCTTGTTTATGTTTCTAGGA............................................................2330.6720000000020
....................................................................................................................CTCTCAGG---ACTATAGCTCTTTCAAA................................2530.6720000000020
...........................................................................................................TTTCTAGGACTCTCAGG---ACTATAGCTCTT.....................................2930.6720000000020
.........................................................................................................TGTTTCTAGGACTCTCAGG---AC...............................................2130.6720000000020
.......................................................................................................TATGTTTCTAGGACTCTCAG.....................................................2030.6720000000020
.................................................................................................CTTGTTTATGTTTCTAGGACTCTGT......................................................2530.6720000000020
.........................................................................................................TGTTTCTAGGACTCTCAGG---ACT..............................................2230.6720100000010
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGCTCTAAT...................................3030.6720000000020
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGCTCAA.....................................2830.6720000000020
.......................................................................................................................TCAGG---ACTATAGCTCTTTCAAAACAGTG..........................2830.6720100000010
.......................................................................................................TATGTTTCTAGGACTCTCAGG---ACCC.............................................2530.6720000000020
.......................................................................................................TATGTTTCTAGGACTCTCAGG---.................................................2130.6720001000010
....................................................................................................................CTCTCAGG---ACTATAGCTCTTTCAAAACAG............................2930.6720000000020
..................................................................................................TTGTTTATGTTTCTAGGACTCTCAG.....................................................2530.6720000000020
...........................................................................TGCCGGTAGCTAAACCC-TTGTCT.............................................................................2330.6720000001100
.........................................................................................................TGTTTCTAGGACTCTCAGG---ACTATAA..........................................2630.6720000000020
.............................................................................................................TCTAGGACTCTCAGG---ACTATAG..........................................2230.6720000000020
......................................................................................................TTATGTTTCTAGGACTCTCAGG---ACT..............................................2530.6720000000020
.......................................................................................................TATGTTTCTAGGACTCTCAGG---ACTATA...........................................2730.6720000000020
...............................................................TGGCCACGAAGTTGCCGGTAGCTAAA.......................................................................................2620.5010000000010
............................................TCCGAGGTAAGGTACACAATGGCCA...........................................................................................................2520.5010000001000
...........................................................................................................................................TCAAAACAGTGATCTTCTATTGGATGG---------.2720.5011000000000
.................GCCCGCTCAAAGCAGGCCAGACAGC......................................................................................................................................2520.5010000000010
.....................................ACAGCAGTCCGAGGTAAGGTACA....................................................................................................................2320.5010000001000
...........................................................................................................................................TCAAAACAGTGATCTTCTAT.................2020.5010000001000
...................................................................................................................................TAGCTCTTTCAAAACAGTGATCTTCT...................2620.5010000000010
...................................AGACAGCAGTCCGAGGTAAGGTAC.....................................................................................................................2420.5010000001000
........................................................TACACAATGGCCACGAAGTTGCCGGT..............................................................................................2620.5010000000010
..................................CAGACAGCAGTCCGAGGTAAGGTAC.....................................................................................................................2520.5010000001000
......................................CAGCAGTCCGAGGTAAGGTACACA..................................................................................................................2420.5010000001000
.................................................................................................................................TATAGCTCTTTCAAAACAGTGAT........................2320.5010000001000
................................GCCAGACAGCAGTCCGAGGTAAGGTA......................................................................................................................2620.5010000001000
...................................................................................................................................TAGCTCTTTCAAAACAGTGATCTTC....................2520.5010000000010
...................................AGACAGCAGTCCGAGGTAAGG........................................................................................................................2120.5010100000000
............................GCAGGCCAGACAGCAGTCCGAGG.............................................................................................................................2320.5010100000000
..........................................................................................................................................TTCAAAACAGTGATCTTCTATTGGAT............2620.5010000000010
..........TGCCGCTGCCCGCTCAAAGCAGGCCA............................................................................................................................................2620.5010100000000
...................................................................CACGAAGTTGCCGGTAGCTAAACCC-TTG................................................................................2820.5010000001000
.........................................CAGTCCGAGGTAAGGTACACAATGGC.............................................................................................................2620.5010000001000
....................CGCTCAAAGCAGGCCAGACAGCAG....................................................................................................................................2420.5010000000010
...............................................................TGGCCACGAAGTTGCCGGTAGCTA.........................................................................................2420.5010100000000
..............................................................ATGGCCACGAAGTTGCCGGTA.............................................................................................2120.5010100000000
...................................................................CACGAAGTTGCCGGTAGCTAAACCC-T..................................................................................2620.5010000001000
.................................................................................................................................TATAGCTCTTTCAAAACAGTGATCTT.....................2620.5010000000010
....................................................................................................................................................TGATCTTCTATTGGATGC---------T1920.5010000000010
.............................................................AATGGCCACGAAGTTGCCGGTAG............................................................................................2320.5010000000010
....................CGCTCAAAGCAGGCCAGACAGCAGTC..................................................................................................................................2620.5010000001000
.............................................CCGAGGTAAGGTACACAATGGCCA...........................................................................................................2420.5010100000000
..........TGCCGCTGCCCGCTCAAAGCAGGCCAG...........................................................................................................................................2720.5010000000010
..............................................................................................................................................AAACAGTGATCTTCTATTGGATGC---------T2520.5010000001000
..............................................................................................................................................AAACAGTGATCTTCTATTGG..............2020.5010100000000
................TGCCCGCTCAAAGCAGGCCAGACAGC......................................................................................................................................2620.5010000000010
............................GCAGGCCAGACAGCAGTCCGA...............................................................................................................................2120.5010000001000
..............................................................................................................................................AAACAGTGATCTTCTATTGGATGC---------C2520.5010000000010
..............................................CGAGGTAAGGTACACAATGGC.............................................................................................................2120.5010000001000
................TGCCCGCTCAAAGCAGGCCAGACAG.......................................................................................................................................2520.5010000000010
....................................................AAGGTACACAATGGCCACGAAGTTGC..................................................................................................2620.5010000000010
.............................CAGGCCAGACAGCAGTCCGAGGT............................................................................................................................2320.5010001000000
......................................CAGCAGTCCGAGGTAAGGTACACAA.................................................................................................................2520.5010000001000
..........................................................................................................................................TTCAAAACAGTGATCTTCTATTGGATG...........2720.5010000000010
................................................................................................................................................ACAGTGATCTTCTATTGGAT............2020.5010100000000
..........TGCCGCTGCCCGCTCAAAGCAGGCCT............................................................................................................................................2620.5010100000000
...................................AGACAGCAGTCCGAGGTAAGGTA......................................................................................................................2320.5010000001000
............................GCAGGCCAGACAGCAGTCCGAGGTA...........................................................................................................................2520.5010100000000
..................CCCGCTCAAAGCAGGCCAGACAGCAG....................................................................................................................................2620.5010000000010
.............................CAGGCCAGACAGCAGTCCGAGGTAAGG........................................................................................................................2720.5010000001000
...........................................................................................................................................TCAAAACAGTGATCTTCTATTGGA.............2420.5010100000000
............................................TCCGAGGTAAGGTACACAATGGCCAC..........................................................................................................2620.5010000000010
.......................TCAAAGCAGGCCAGACAGCAGTCCGAG..............................................................................................................................2720.5010000000010
.............................................CCGAGGTAAGGTACACAATGGCCAC..........................................................................................................2520.5010000000010
......................................CAGCAGTCCGAGGTAAGGTACACAATG...............................................................................................................2720.5010000001000
..................................CAGACAGCAGTCCGAGGTAAGG........................................................................................................................2220.5010000001000
................TGCCCGCTCAAAGCAGGCCAGACAGCAGT...................................................................................................................................2920.5010000001000
...................................................................................................................................TAGCTCTTTCAAAACAGTGATCTTCTAT.................2820.5010100000000
....................CGCTCAAAGCAGGCCAGACAGCAGT...................................................................................................................................2520.5010000001000
......................CTCAAAGCAGGCCAGACAGCAG....................................................................................................................................2230.3310000000010
............................GCAGGCCAGACAGCAGTCCGAGGAC...........................................................................................................................2530.3310001000000
...............................................................................................................TAGGACTCTCAGG---ACTATAGAA........................................2230.3310000000010
...........................................................................TGCCGGTAGCTAAACCC-TTGTCC.............................................................................2330.3310000001000
...............................................................................................................TAGGACTCTCAGG---ACTATAGCTCTA.....................................2530.3310000000010
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGCTCA......................................2730.3310000000010
...................................................................................................TGTTTATGTTTCTAGGACTCTCAGG---ACC..............................................2830.3310000000010
...........................................................................TGCCGGTAGCTAAACCC-TTGTCTTGTCC........................................................................2830.3310000001000
..........................................................................TTGCCGGTAGCTAAACCC-TTGTCTTGTCC........................................................................2930.3310000001000
....................................................................................................GTTTATGTTTCTAGGACTCTCAGG---AC...............................................2630.3310000000010
...........................................................................TGCCGGTAGCTAAACCC-TTGTCTTGT..........................................................................2630.3310100000000
.......................TCAAAGCAGGCCAGACAGCAG....................................................................................................................................2130.3310000000010
.....................................................................................TAAACCC-TTGTCTTGTTTATGTCC..................................................................2430.3310000000010
........................................................................................................ATGTTTCTAGGACTCTCAGG---ACTA.............................................2430.3310100000000
..........................................................................TTGCCGGTAGCTAAACCC-TTGT...............................................................................2230.3310000001000
.......................................................................................................................TCAGG---ACTATAGCTCTTTCCC.................................2130.3310000000010
.................................................................................................................GGACTCTCAGG---ACTATAGCTC.......................................2130.3310100000000
................................................................................................................AGGACTCTCAGG---ACTATAGCTCTTTCA..................................2730.3310000000010
......................................................................................................TTATGTTTCTAGGACTCTCAGG---.................................................2230.3310000000010
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGCTCTTA....................................2930.3310000000010
...........................................................................................................TTTCTAGGACTCTCAGG---ACTATAG..........................................2430.3310000000010
..............................................................................................................CTAGGACTCTCAGG---ACTATAGCTCTT.....................................2630.3310000000010
........................................................................................................ATGTTTCTAGGACTCTCAGG---ACTATAGC.........................................2830.3310000000010
.....................................................................................................TTTATGTTTCTAGGACTCTCAGT---.................................................2330.3310000000010
........................CAAAGCAGGCCAGACAGCAGT...................................................................................................................................2130.3310000001000
.........................................................................................................TGTTTCTAGGACTCTCAGG---ACTATAGCTC.......................................2930.3310000000010
.............................................................................................................TCTAGGACTCTCAGG---ACTATAGCTCTTTCAG.................................3130.3310000000010
............................................................................................................TTCTAGGACTCTCAGG---ACTATA...........................................2230.3310000000010
...................................................................................................TGTTTATGTTTCTAGGACTCTCAGG---ACA..............................................2830.3310000000010
.....................................................................................TAAACCC-TTGTCTTGTTTATGTTTC.................................................................2530.3310000000010
...............................................................................................................TAGGACTCTCAGG---ACTATAGCTCTTTCC..................................2830.3310000000010
.......................................................................................................................TCAGG---ACTATAGCTCTTTCAAAACC.............................2530.3310000000010
...........................................................................TGCCGGTAGCTAAACCC-TTGTC..............................................................................2230.3310000010000
........................................................................................................................CAGG---ACTATAGCTCTTTCAAAACAGTG..........................2730.3310000000010
..........................................................................................................GTTTCTAGGACTCTCAGG---ACTATAG..........................................2530.3310000000010
.................................................................................TAGCTAAACCC-TTGTCTTGA..........................................................................2030.3310000000010
..............................................................................................TGTCTTGTTTATGTTTCTAGGACTCT........................................................2630.3310000000010
.......................................................................................................................TCAGG---ACTATAGCTCTTTCAAAACAGT...........................2730.3310000000010
.......................................................................................................................TCAGG---ACTATAGCTCTTTCAAAACAGAT..........................2830.3310000000010
.......................................................................................................TATGTTTCTAGGACTCTCAGG---ACTAT............................................2630.3310000000010
......................................................................................AAACCC-TTGTCTTGTTTATGTTTCT................................................................2530.3310000000010
.......................................................................................................................TCAGG---ACTATAGCTCTTTCAAAACAC............................2630.3310000000010
............................................................................GCCGGTAGCTAAACCC-TTG................................................................................1930.3310100000000
................................................................................................................................CTATAGCTCTTTCAAAACAG............................2030.3310000000010
......................................................................................................TTATGTTTCTAGGACTCTCAGG---ACTAA............................................2730.3310000000010
..........................................................................................................GTTTCTAGGACTCTCAGG---ACTATA...........................................2430.3310000000010
.................................................................................TAGCTAAACCC-TTGTCTTGT..........................................................................2030.3310100000000
...........................................................................TGCCGGTAGCTAAACCC-TTGTCTAA...........................................................................2530.3310000000010
..........................................................................TTGCCGGTAGCTAAACCC-TTGTCTTGT..........................................................................2730.3310100000000
......................................................................................................................CTCAGG---ACTATAGCTCTTTCAAAACA.............................2630.3310000000010
...................................................................................................................ACTCTCAGG---ACTATAGCTCTTTCAAA................................2630.3310000000010
..........................................................................TTGCCGGTAGCTAAACCC-TTGTCTT............................................................................2530.3310000000010
.......................................................................................................................TCAGG---ACTATAGCTCTTTCAAAACAGA...........................2730.3310000000010
.......................................................................................................................TCAGG---ACTATAGCTCTTTCAAAT...............................2330.3310000000010
.........................................................................................................TGTTTCTAGGACTCTCAGG---ACTAT............................................2430.3310000000010
......................................................................................................TTATGTTTCTAGGACTCTCAGG---ACA..............................................2530.3310000000010
.............................................................................................TTGTCTTGTTTATGTTTCTAGGACTC.........................................................2630.3310000000010
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGCTCTAA....................................2930.3310000000010
..............................................................................................................CTAGGACTCTCAGG---ACTATAGCTCT......................................2530.3310100000000
............................................................................................................TTCTAGGACTCTCAGG---ACTATAGCTCC......................................2730.3310000000010
......................CTCAAAGCAGGCCAGACAGCA.....................................................................................................................................2130.3310000000010
...............................................................................................................TAGGACTCTCAGG---ACTATC...........................................1940.2510000000010
droPer2
TC----AAGGTGCGACCGGCATCTAAATTGGTACTTTGCAGATTCCCGTCGGAAAGCGCGCGATTGACAATTGATTTGAAATATATGTAAAACCAATTCCATTTATATTTATGCATATTTATTTAAGTATATATATAT---------TTTTTCTTATATTGTATATTTAGATACATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................CGATTGACAATTGATTTGAAATATATG.........................................................................................27200.75150150000
.......................................AGATTCCCGTCGGAAAGCG......................................................................................................................19200.357700000
.......................................AGATTCCCGTCGGAAAGCGC.....................................................................................................................20200.204400000
.......................................AGATTCCCGTCGGAAAGCGT.....................................................................................................................20200.204310000
.......................................AGATTCCCGTCGGAAAGCGCG....................................................................................................................21200.153110001
..........................................TTCCCGTCGGAAAGCGCGCGA.................................................................................................................21200.153300000
........................................GATTCCCGTCGGAAAGCGCGC...................................................................................................................21200.102200000
..............................GTACTTTGCAGATTCCCGTCGGAA..........................................................................................................................24200.102020000
.................................CTTTGCAGATTCCCGTCGGAAAGCG......................................................................................................................25200.102200000
...............................TACTTTGCAGATTCCCGTCGG............................................................................................................................21200.102200000
...............................TACTTTGCAGATTCCCGTCGGAAAGC.......................................................................................................................26200.102200000
................................ACTTTGCAGATTCCCGTCGGA...........................................................................................................................21200.102200000
...............................TACTTTGCAGATTCCCGTCGGAAAGCG......................................................................................................................27200.102200000
..........................................................CGCGATTGACAATTGATTTGAAA...............................................................................................23200.051010000
............................................CCCGTCGGAAAGCGCGCGAT................................................................................................................20200.051100000
...........................................................................................................................................................ATATTGTATATTTAGATACA.20200.051010000
....................................TGCAGATTCCCGTCGGAAAGCG......................................................................................................................22200.051100000
.................................................CGGAAAGCGCGCGATTGACAATTGATT....................................................................................................27200.051010000
.............................................................GATTGACAATTGATTTGAAATATATG.........................................................................................26200.051010000
...............................TACTTTGCAGATTCCCGTCG.............................................................................................................................20200.051010000
.......................................AGATTCCCGTCGGAAAGC.......................................................................................................................18200.051100000
.............................................................GATTGACAATTGATTTGAAATA.............................................................................................22200.051010000
................................................................................................................GCATATTTATTTAAGTATATATA.........................................23200.051010000
......................................................................................................TTATATTTATGCATATTTAT......................................................20200.051010000
............................................................CGATTGACAATTGATTTGAAATAT............................................................................................24200.051010000
...................................TTGCAGATTCCCGTCGGAAAGCG......................................................................................................................23200.051100000
TC----AAGGTGCGACCGGCATCTAAAT....................................................................................................................................................24200.051010000
.............................................................................................CAATTCCATTTATATTTATGCATATT.........................................................26200.051010000
..........................................................CGCGATTGACAATTGATTTGA.................................................................................................21200.051010000
............................................CCCGTCGGAAAGCGCGCGATTGACAAT.........................................................................................................27200.051010000
..............................GTACTTTGCAGATTCCCGTCG.............................................................................................................................21200.051010000
...........................................TCCCGTCGGAAAGCGCGCGATTGACAA..........................................................................................................27200.051100000
..............................GTACTTTGCAGATTCCCGTC..............................................................................................................................20200.051000100
..........................................................CGCGATTGACAATTGATTTGAAATATAT..........................................................................................28200.051010000
............................................................................................CCAATTCCATTTATATTTATGCATAT..........................................................26200.051010000
droWil2
AT----------------------------------------------------------------------------------------------------ACATACCTATGTATATTTATGTACATATGTATGTTT---------TTTTTC-----------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads

Generated: 05/18/2015 at 04:19 AM