ID:

dps_2351

 Coordinate:

Unknown_singleton_32:5549-5612 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.6 -10.4 -10.1 -9.8

Flybase annnotation

CDS [Dpse\GA23202-cds]; CDS [Dpse\GA23202-cds]; exon [dpse_GLEANR_11766:1]; exon [dpse_GLEANR_11766:2]; intron [Dpse\GA23202-in]

No Repeatable elements found

mature
  1. dps_2351  Unknown_singleton_32:5560-5581 +
  2. Unknown_group_449:3303-3324 +
star

Sense Strand Reads

##################################################----------------------------------------------------------------##################################################
CAACGTGATGAAAGATTTAGCTCTGAGAGTGGTAGCCCTTCAGGCCCTGGGTTAATAATTTCGAGAAGCTGCACACCAGGACAATTGGGACCGCCACTATTGGTACCCAAACAGCTGCGAAGCCGTCGCACACCGGCTCAAAGAGGCTGCGCGAGTCGCCCCAA
**************************************************..................((...............((((...((((....)))).))))...))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 GSM343916
embryo
 V112
male body
.............................................................CGAGAAGCTGCACACCAGGACA................................................................................. 22 0 2 45.50 91 89 0 2 0 0
.............................................................CGAGAAGCTGCACACCAGGACAA................................................................................ 23 0 2 36.00 72 68 3 1 0 0
.............................................................CGAGAAGCTGCACACCAGGAC.................................................................................. 21 0 3 25.67 77 73 0 3 1 0
.............................................................CGAGAAGCTGCACACCAGGACAAT............................................................................... 24 0 2 24.00 48 45 3 0 0 0
.............................................................CGAGAAGCTGCACACCAGGACAATTG............................................................................. 26 0 2 6.00 12 12 0 0 0 0
.AACGTGATGAAAGATTTAGC............................................................................................................................................... 20 0 3 5.67 17 10 1 3 3 0
..............................................................GAGAAGCTGCACACCAGGACAA................................................................................ 22 0 2 5.50 11 11 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGGACAATT.............................................................................. 25 0 2 4.50 9 7 0 2 0 0
..............................................................GAGAAGCTGCACACCAGGACA................................................................................. 21 0 2 4.00 8 8 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGG.................................................................................... 19 0 3 3.67 11 11 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGGA................................................................................... 20 0 3 3.67 11 10 0 1 0 0
...CGTGATGAAAGATTTAGCTCTGAGA........................................................................................................................................ 25 0 2 3.50 7 4 3 0 0 0
...CGTGATGAAAGATTTAGCTCTGAGAG....................................................................................................................................... 26 0 2 3.00 6 4 2 0 0 0
...CGTGATGAAAGATTTAGCTCTGA.......................................................................................................................................... 23 0 2 2.00 4 2 2 0 0 0
..............................................................GAGAAGCTGCACACCAGGACAATTG............................................................................. 25 0 2 2.00 4 4 0 0 0 0
...CGTGATGAAAGATTTAGCTTGA........................................................................................................................................... 22 3 2 2.00 4 0 4 0 0 0
..............................................................GAGAAGCTGCACACCAGGACAAT............................................................................... 23 0 2 1.50 3 3 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGGACAAA............................................................................... 24 1 2 1.50 3 3 0 0 0 0
.AACGTGATGAAAGATTTAGCTCTG........................................................................................................................................... 24 0 2 1.50 3 1 2 0 0 0
.............................................................CGAGAAGCTGCACACCAGGACAAC............................................................................... 24 1 2 1.00 2 2 0 0 0 0
..............................................................GAGAAGCTGCACACCAGGACAATTGG............................................................................ 26 0 1 1.00 1 1 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGGACAATA.............................................................................. 25 1 2 1.00 2 2 0 0 0 0
.......................................................................CACACCAGGACAATTGGGACCGCC..................................................................... 24 0 1 1.00 1 1 0 0 0 0
...........................................................................................................CAAACAGCTGCGAAGCCGTCGC................................... 22 0 1 1.00 1 1 0 0 0 0
...............................................................AGAAGCTGCACACCAGGACAAT............................................................................... 22 0 2 1.00 2 2 0 0 0 0
...CGTGATGAAAGATTTAGCTCTG........................................................................................................................................... 22 0 2 1.00 2 2 0 0 0 0
...CGTGATGAAAGATTTAGCTCTGAG......................................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
...CGTGATGAAAGATTTAGC............................................................................................................................................... 18 0 3 1.00 3 2 1 0 0 0
.....................................................................TGCACACCAGGACAATTGGGACCGCCA.................................................................... 27 0 1 1.00 1 1 0 0 0 0
...CGTGATGAAAGATTTAGCTCT............................................................................................................................................ 21 0 2 1.00 2 2 0 0 0 0
.....................................................................TGCACACCAGGACAATTGGGA.......................................................................... 21 0 1 1.00 1 1 0 0 0 0
.......................................................TCTTTGCGAGAAGCTGCACACCAGGAC.................................................................................. 27 3 1 1.00 1 1 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGGACAAAA.............................................................................. 25 2 2 1.00 2 2 0 0 0 0
..............................................................GAGAAGCTGCACACCAGGAC.................................................................................. 20 0 3 1.00 3 3 0 0 0 0
.............................................................CTAGAAGCTGCACACCAGGACA................................................................................. 22 1 2 1.00 2 0 0 2 0 0
....................................................TAATAATTTCGAGAAGCTGCACAC........................................................................................ 24 0 1 1.00 1 0 0 1 0 0
.AACGTGATGAAAGATTTAG................................................................................................................................................ 19 0 3 0.67 2 2 0 0 0 0
..............................................................GAGAAGCTGCACACCAGGA................................................................................... 19 0 3 0.67 2 2 0 0 0 0
....................................................................................................TGGTACCCAAACAGCTGCAAAGC......................................... 23 1 5 0.60 3 3 0 0 0 0
.............................................................CGGGAAGCTGCACACCAGGACAA................................................................................ 23 1 2 0.50 1 1 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGGACAT................................................................................ 23 1 2 0.50 1 1 0 0 0 0
...............................................................AGAAGCTGCACACCAGGACAATTG............................................................................. 24 0 2 0.50 1 1 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGGACAATGG............................................................................. 26 1 2 0.50 1 1 0 0 0 0
.............................................................CGAGAAGCTGTACACCAGGACA................................................................................. 22 1 2 0.50 1 0 1 0 0 0
...........................................................TTCGAGAAGCTGCACACCAGGACAAT............................................................................... 26 0 2 0.50 1 1 0 0 0 0
............................................................CCGAGAAGCTGCACACCAGGACAATT.............................................................................. 26 1 2 0.50 1 1 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGGACAAAAA............................................................................. 26 3 2 0.50 1 1 0 0 0 0
.............................................................AGAGAAGCTGCACACCAGGACAATTG............................................................................. 26 1 2 0.50 1 1 0 0 0 0
....GTGATGAAAGATTTAGCTCTGA.......................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
...CGTGATGAAAGATTTAGCTCTGAGAGA...................................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0
....GTGATGAAAGATTTAGCTCTGAGA........................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGGAA.................................................................................. 21 1 4 0.50 2 2 0 0 0 0
.......ATGAAAGATGTAGCTCTTAGAGC...................................................................................................................................... 23 3 2 0.50 1 1 0 0 0 0
..ACGTGATGAAAGATTTAGCTCTGAG......................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.............................................................CGAGAAGCTGCACACGAGGACAATTG............................................................................. 26 1 2 0.50 1 1 0 0 0 0
...CGTGATGAAAGATTTAGCTC............................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0
.............................................................CGAGAACCTGCACACCAGGACAA................................................................................ 23 1 2 0.50 1 1 0 0 0 0
.............................................................CTAGAAGCTGCACACCAGTACAATT.............................................................................. 25 2 2 0.50 1 0 0 1 0 0
.............................................................CGAGAAGCTCCACACCAGGACAA................................................................................ 23 1 2 0.50 1 0 0 0 0 1
.....TGATGAAAGATTTAGCTCTGA.......................................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
....................................................................................................TGGTACCCAAACAGCTGCGAAGCC........................................ 24 0 5 0.40 2 2 0 0 0 0
....................................................................................................TGGTACCCAAACAGCTGCGAAGC......................................... 23 0 5 0.40 2 2 0 0 0 0
...................................................................................................CTGGTACCCAAACAGCTGCAAAGCCGT...................................... 27 2 5 0.40 2 0 0 0 2 0
....................................................................................................TGGTACCCAAACAGCTGCGAAGCCG....................................... 25 0 5 0.40 2 2 0 0 0 0
....................................................................................................TGGTACCCAAACAGCTGCAAAGCC........................................ 24 1 5 0.40 2 2 0 0 0 0
.............................................................CGAGAAGCTGCACACCAG..................................................................................... 18 0 3 0.33 1 0 1 0 0 0
.AACGTGATGAAAGATTTAGCA.............................................................................................................................................. 21 1 3 0.33 1 1 0 0 0 0
..........................................................TGTCGAGAAGCCGCACACCAGGAC.................................................................................. 24 2 3 0.33 1 0 0 1 0 0
...CGTGATGAAAGATTTAG................................................................................................................................................ 17 0 3 0.33 1 0 1 0 0 0
.AACGTGATGAAAGATTTAGA............................................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0
..ACGTGATGAAAGATTTAGC............................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0
..............................................................GAGAAGCTGCACACCAGG.................................................................................... 18 0 3 0.33 1 1 0 0 0 0
.............................................................CGAGAAGCTGCGCACCAGGAC.................................................................................. 21 1 3 0.33 1 1 0 0 0 0
............................................................TCGAGAAGCTGCACACCAGGAC.................................................................................. 22 0 3 0.33 1 1 0 0 0 0
.............................................................CTAGAAGCTGCACACCAGGAC.................................................................................. 21 1 3 0.33 1 0 0 1 0 0
.............................................................CGGGAAGCTGCACACCAGGA................................................................................... 20 1 3 0.33 1 1 0 0 0 0
.............................................................CGAGAAGCTGCACACCAGGAT.................................................................................. 21 1 3 0.33 1 1 0 0 0 0
.....................................................................................................................................CGGCTCAAAGAGGCTGCGCGAGT........ 23 0 7 0.29 2 2 0 0 0 0
...........................................................TTCGAGAAGCTGCACACCAGAAA.................................................................................. 23 2 4 0.25 1 1 0 0 0 0
...CGTGATGAAAGATTTGGC............................................................................................................................................... 18 1 4 0.25 1 0 0 0 1 0
.......................................................................................................TACCCAAACAGCTGCAAAGCCG....................................... 22 1 5 0.20 1 1 0 0 0 0
....................................................................................................TGGTACCCAAACAGCTGCGAAT.......................................... 22 1 5 0.20 1 1 0 0 0 0
.........GAAAGATGTAGCTCTTAGA........................................................................................................................................ 19 2 5 0.20 1 1 0 0 0 0
...................................................................................................CTGGTACCCAAACAGCTGCGAAGCCGT...................................... 27 1 5 0.20 1 1 0 0 0 0
....................................................................................................TGGTACCCAAACAGCTGCAAA........................................... 21 1 5 0.20 1 1 0 0 0 0
....................................................................................................TGGTACCCAAACAGCTGCGAAGA......................................... 23 1 5 0.20 1 1 0 0 0 0
....................................................................................................TGCTACCAAAACAGCTGCGAAGC......................................... 23 2 5 0.20 1 0 0 1 0 0
.................................................................................................TAATGGTACCCAAACAGCTGCGAAGC......................................... 26 1 5 0.20 1 0 0 1 0 0
...........................................................................................................CAAACAGCTGCGAAGCCG....................................... 18 0 5 0.20 1 1 0 0 0 0
................................................................................................................................CACACCGGCTCAAAGAGGCTGC.............. 22 0 6 0.17 1 1 0 0 0 0
...............................................................................................................................GCACACCGGCTCAAAGAGGCTGC.............. 23 0 6 0.17 1 1 0 0 0 0
................................................................................................................................CACACCGGCTCAAAGAGGCTGCGCGA.......... 26 0 6 0.17 1 0 1 0 0 0
................................................................................................................................CACACCGGCTCAAAGAGGCTGCGCG........... 25 0 6 0.17 1 0 0 0 1 0
....................................................................................................................................CCGGTTCAAAGAGGCTGCGCGA.......... 22 1 6 0.17 1 1 0 0 0 0
...................................................................................................................................ACCGGCTCAAAGAGGCTGCGCGAGT........ 25 0 6 0.17 1 1 0 0 0 0
..................................................................................................................................CACCGGTTCAAAGAGGCTGCGCG........... 23 1 6 0.17 1 1 0 0 0 0
........................................................................................................................................TTCAAAGAGGCTGCGCGAG......... 19 1 7 0.14 1 1 0 0 0 0
.........................................................................................................................................TCAAAGAGGCTGCGCGAG......... 18 0 7 0.14 1 1 0 0 0 0
.........................................................................................................................................TCAAAGAGGCTGCGCGAGAAA...... 21 3 9 0.11 1 1 0 0 0 0
......................................................................GCACACAAGGACAAATGGGC.......................................................................... 20 3 18 0.06 1 1 0 0 0 0
......................................................................GCACACAAGGACAAATGG............................................................................ 18 2 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GTTGCACTACTTTCTAAATCGAGACTCTCACCATCGGGAAGTCCGGGACCCAATTATTAAAGCTCTTCGACGTGTGGTCCTGTTAACCCTGGCGGTGATAACCATGGGTTTGTCGACGCTTCGGCAGCGTGTGGCCGAGTTTCTCCGACGCGCTCAGCGGGGTT
**************************************************..................((...............((((...((((....)))).))))...))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 GSM343916
embryo
 SRR902011
testis
 V112
male body
....................................................................................................................................GGCCGAGTTTCTCCGACGCGCTCA........ 24 0 6 9.50 57 57 0 0 0 0 0
...........................................................AAGCTCTTCGACGTGTGGTCCTGT................................................................................. 24 0 2 8.50 17 9 5 0 3 0 0
..........................................................AAAGCTCTTCGACGTGTGGTCCTGT................................................................................. 25 0 2 8.00 16 11 5 0 0 0 0
............................................................AGCTCTTCGACGTGTGGTCCTGT................................................................................. 23 0 2 7.00 14 8 5 0 1 0 0
.........................................................TAAAGCTCTTCGACGTGTGGTCCTGT................................................................................. 26 0 2 5.50 11 10 0 1 0 0 0
.....................................................................................................................................GCCGAGTTTCTCCGACGCGCTCA........ 23 0 7 4.43 31 31 0 0 0 0 0
......................................................................................................................................CCGAGTTTCTCCGACGCGCTCA........ 22 0 7 4.29 30 30 0 0 0 0 0
....................................................................................................................................GGCCGAGTTTCTCCGACGCGCTCAG....... 25 0 5 4.00 20 20 0 0 0 0 0
................................................CCCAATTATTAAAGCTCTTCGAC............................................................................................. 23 0 1 4.00 4 4 0 0 0 0 0
.......................................................................................................................................CGAGTTTCTCCGACGCGCTCA........ 21 0 7 3.14 22 22 0 0 0 0 0
..................................................................................................................................GTGGCCGAGTTTCTCCGACGCGCTCA........ 26 0 6 2.83 17 17 0 0 0 0 0
..................................................................................................................................GTGGCCGAGTTTCTCCGACGCGCTCAG....... 27 0 5 2.80 14 14 0 0 0 0 0
.....................................................................................................................................GCCGAGTTTCTCCGACGCGCTCAG....... 24 0 6 2.50 15 15 0 0 0 0 0
..............................CCATCGGGAAGTCCGGGACCCAATTATT.......................................................................................................... 28 0 1 2.00 2 0 0 0 0 2 0
.........................................................AAAAGCTCTTCGACGTGTGGTCCTGT................................................................................. 26 1 2 2.00 4 2 0 2 0 0 0
.............................................GGACCCAATTATTAAAGCTCTTCGAC............................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0
......................................................................................................................................CCGAGTTTCTCCGACGCGCTCAG....... 23 0 6 1.50 9 9 0 0 0 0 0
.........................................................TAAAGCTCTTCGACGTGTGGTCCTGTT................................................................................ 27 0 2 1.50 3 1 2 0 0 0 0
....................................................................................................................................GGCCGAGTTTCTCCGACGCGCTC......... 23 0 6 1.50 9 9 0 0 0 0 0
........................................................................................................................................GAGTTTCTCCGACGCGCTCA........ 20 0 7 1.43 10 10 0 0 0 0 0
...................................................................................................................................TGGCCGAGTTTCTCCGACGCGCTCA........ 25 0 6 1.33 8 8 0 0 0 0 0
.........................................................TAAAGCTCTTCGACGTGTGGTCCT................................................................................... 24 0 3 1.33 4 2 2 0 0 0 0
.............................................GGACCCAATTATTAAAGCTCTTCGA.............................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
...............................................................TCTTCGACGTGTGGTCCTGTT................................................................................ 21 0 2 1.00 2 2 0 0 0 0 0
................................................CCCAATTATTAAAGCTCTTCGACGTGT......................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
...........................................CGGGACCCAATTATTAAAGCTCTTCGA.............................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
..............................................................CTCTTCGACGTGTGGTCCTGT................................................................................. 21 0 2 1.00 2 2 0 0 0 0 0
.......................................................AAAAAAGCTCTTCGACGTGTGGTCCTGT................................................................................. 28 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................TGGCGGTGATAACCATGGGT....................................................... 20 0 1 1.00 1 1 0 0 0 0 0
................................................................CTTCGACGTGTGGTCCTGTT................................................................................ 20 0 2 1.00 2 1 0 0 1 0 0
.............................................................GCTCTTCGACGTGTGGTCCTGT................................................................................. 22 0 2 1.00 2 2 0 0 0 0 0
................................................CCCAATTATTAAAGCTCTTCGA.............................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
...........................................................AAGCTCTTCGACGTGTGGTCCTGTT................................................................................ 25 0 2 1.00 2 2 0 0 0 0 0
...........................................................................................................................GCAGCGTGAGGCCGAGTTG...................... 19 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................CCTGGCGGTGATAACCATGGGT....................................................... 22 0 1 1.00 1 0 0 1 0 0 0
.................................................CCAATTATTAAAGCTCTTCGAC............................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
................................................CCCAATTATTAAAGCTCTTCGACGT........................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................CCTGGCGGTGATGACCATGGGT....................................................... 22 1 5 1.00 5 4 0 1 0 0 0
...............................................ACCCAATTATTAAAGCTCTTCGAC............................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
..........................................................AAAGCTCTTCGACGTGTGGTCCTGTT................................................................................ 26 0 2 1.00 2 1 1 0 0 0 0
..................................................................................................................................GTGGCCGAGTTTCTCCGACGCGCTC......... 25 0 6 0.67 4 4 0 0 0 0 0
..................................................................................................................................GTGGCCAAGTTTCTCCGACGCGCTCAG....... 27 1 5 0.60 3 3 0 0 0 0 0
......................................................................................................................................CCGAGTTTCTCCGACGCGCTC......... 21 0 7 0.57 4 4 0 0 0 0 0
................................................................ATTCGACGTGTGGTCCTGTT................................................................................ 20 1 2 0.50 1 1 0 0 0 0 0
..........................................................AAAGCTCTTCGCCGTGTGGTCCTGT................................................................................. 25 1 2 0.50 1 0 0 0 1 0 0
.................................................................ATCGACGTGTGGTCCTGT................................................................................. 18 1 2 0.50 1 0 0 1 0 0 0
..............................................................CTCTTCGACGTGTGGTCCTGTT................................................................................ 22 0 2 0.50 1 0 1 0 0 0 0
.............................................................GCTCTTCGACGTGTGGGCCTGT................................................................................. 22 1 2 0.50 1 0 0 0 1 0 0
................................................................TTTCGACGTGTGGTCCTGTT................................................................................ 20 1 2 0.50 1 1 0 0 0 0 0
................................................................ATTCGACGTGTGGTCCTGT................................................................................. 19 1 2 0.50 1 1 0 0 0 0 0
.............................................................GCTCTTCGACGTGTGGTCCTGTT................................................................................ 23 0 2 0.50 1 1 0 0 0 0 0
...........................................................TTGCTCTTCGACGTGTGGTCCTGTT................................................................................ 25 2 2 0.50 1 0 0 1 0 0 0
........................................................CAAAAGCTCTTCGACGTGTGGTCCTGT................................................................................. 27 2 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................................AGTTTCTCCGACGCGCTCA........ 19 0 7 0.43 3 3 0 0 0 0 0
.......................................................................................CCTGACGGTGATGACCATGGGT....................................................... 22 2 5 0.40 2 1 0 1 0 0 0
...................................................................................................................................TGGCCGAGTTTCTCCGACGCGCTCAG....... 26 0 5 0.40 2 2 0 0 0 0 0
....................................................................................................................................GGCCAAGTTTCTCCGACGCGCTCAG....... 25 1 5 0.40 2 2 0 0 0 0 0
........................................................TTAAAGCTCTTCGACGTGTGGTCCT................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................GTGGCCGAGTTTCTCCGACGCGCT.......... 24 0 6 0.33 2 2 0 0 0 0 0
.............................................................................................................................TGCGTGTGGCCGAGTTTCT.................... 19 1 6 0.33 2 2 0 0 0 0 0
........................................................AAAAAGCTCTTCGACGTGTGGTCCT................................................................................... 25 2 3 0.33 1 1 0 0 0 0 0
....................................................ATTGTTAAAGCTCTTCGACGTGTGGT...................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0
..................................................AAATTGTTAAAGCTCTTCGACGTGT......................................................................................... 25 2 3 0.33 1 1 0 0 0 0 0
...................................................................................................................................TGGCCGAGTTTCTCCGACGCGCT.......... 23 0 6 0.33 2 2 0 0 0 0 0
........................................................ATAAAGCTCTTCGACGTGTGGTCCT................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
.........................................................TAAAGCTCTTCGACGTGTGGT...................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0
....................................................................................................................................GGCCGAGTTTCTCCGACGCGC........... 21 0 6 0.33 2 2 0 0 0 0 0
............................................................AGCTCTTCGACGTGTGGT...................................................................................... 18 0 3 0.33 1 1 0 0 0 0 0
....................................................................................................................................GGCCGAGTTTCTCCGACGCGCT.......... 22 0 6 0.33 2 1 0 1 0 0 0
..........................................................AAAGCTCTTCGACGTGTGGTCCT................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0
................................................................................................................................GTGTGGCCGAGTTTCTCCGACGCGC........... 25 0 6 0.33 2 0 2 0 0 0 0
.......................................................................................................................................CGAGTTTCTCCGACGCGCTCAG....... 22 0 6 0.33 2 2 0 0 0 0 0
.....................................................................................................................................GCCGAGTTTCTCCGACGCGCT.......... 21 0 7 0.29 2 2 0 0 0 0 0
.....................................................................................................................................TCCGAGTTTCTCCGACGCGCTCA........ 23 1 7 0.29 2 2 0 0 0 0 0
...............AAATCGGGACTCTCACCATC................................................................................................................................. 20 1 5 0.20 1 1 0 0 0 0 0
.......................................................................................CCTGACGGTGATGACCATGGTT....................................................... 22 3 5 0.20 1 0 0 1 0 0 0
......................................................................................CCCTGACGGTGATGACCATGGGT....................................................... 23 2 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................GTGGCCAAGTTTCTCCGACGCGCTCAGG...... 28 2 5 0.20 1 1 0 0 0 0 0
...................................................................................................................................TGGCCAAGTTTCTCCGACGCGCTCAG....... 26 1 5 0.20 1 1 0 0 0 0 0
......................................................................................................CATGGGTTTGTCGACGCTTCG......................................... 21 0 5 0.20 1 1 0 0 0 0 0
.....................................................................................................CCATGGGTTTGTCGACGCTTCGGC....................................... 24 0 5 0.20 1 0 0 0 1 0 0
.......................................................................................CATGGCGGTGATGACCATGGGT....................................................... 22 2 5 0.20 1 1 0 0 0 0 0
................................................................................................................................GTGTGGCCGAGTTTCTCCGACG.............. 22 0 6 0.17 1 1 0 0 0 0 0
...................................................................................................................................TGGCCGATTTTCTCCGACGCGCTC......... 24 1 6 0.17 1 0 0 0 1 0 0
..................................................................................................................................GTGGCCGAGTTTCTCCGAC............... 19 0 6 0.17 1 1 0 0 0 0 0
....................................................................................................................................GGCCGAGTTTCTCCGACGCG............ 20 0 6 0.17 1 1 0 0 0 0 0
...........................................................................................................................................TTTCTCCGACGCGCTCAG....... 18 0 6 0.17 1 1 0 0 0 0 0
...................................................................................................................................TGGCCGAGTTTCTCCGACGC............. 20 0 6 0.17 1 1 0 0 0 0 0
...................................................................................................................................CGGCCGAGTTTCTCCGACGCGCTCA........ 25 1 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................CGTGGCCGAGTTTCTCCGACGC............. 22 1 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................AATGGCCGAGTTTCTCCGACGCGCTCA........ 27 2 6 0.17 1 1 0 0 0 0 0
..............................................................................................................................AAGTGTGGCCGAGTTTCTCC.................. 20 2 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................TGTGGCCGAGTTTCTCCGACGCGC........... 24 0 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................TGTGGCCGAGTTTCTCCGACGCGCTC......... 26 0 6 0.17 1 1 0 0 0 0 0
.............................................................................................................................TGCGTGTGGCCGAGTTTCTCCGACGC............. 26 1 6 0.17 1 1 0 0 0 0 0
..................................................................................................................................GTGGCCGAGTTTCTCCGACGCGCTCG........ 26 1 6 0.17 1 1 0 0 0 0 0
........................................................................................................................CTGGCAGCGTGAGGCCGAGT........................ 20 3 6 0.17 1 0 0 0 0 0 1
..............................................................................................................................GCGTGTGGCCGAGTTTCTC................... 19 0 6 0.17 1 1 0 0 0 0 0
...............................................................................................................................CGTGTGGCCGAGTTTCTCC.................. 19 0 6 0.17 1 1 0 0 0 0 0
........................................................................................................................................GAGTTTCTCCGACGCGCTCAG....... 21 0 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................TGTGGCCGAGTTTCTCCGACGCG............ 23 0 6 0.17 1 1 0 0 0 0 0
.................................................................................................................................AGTGGCCGAGTTTCTCCGACGCGCTC......... 26 1 6 0.17 1 1 0 0 0 0 0
....................................................................................................................................AGCCGAGTTTCTCCGACGCGCTCA........ 24 1 7 0.14 1 1 0 0 0 0 0
.....................................................................................................................................ACCGAGTTTCTCCGACGCGTT.......... 21 2 7 0.14 1 1 0 0 0 0 0
.......................................................................................................................................AGAGTTTCTCCGACGCGCTCA........ 21 1 7 0.14 1 1 0 0 0 0 0
.....................................................................................................................................GCCGAGTTTCTCCGACGCG............ 19 0 7 0.14 1 1 0 0 0 0 0
........................................................................................................................................GGGTTTCTCCGACGCGCTCA........ 20 1 7 0.14 1 1 0 0 0 0 0
.....................................................................................................................................GCCGAGTTTCTCCGACGCGCTC......... 22 0 7 0.14 1 1 0 0 0 0 0
......................................................................................................................................ACGCGTTTCTCCGACGCGCTCA........ 22 2 7 0.14 1 1 0 0 0 0 0
.......................................................................................................................................AAAGTTTCTCCGACGCGCTCA........ 21 2 7 0.14 1 1 0 0 0 0 0
......................................................................................................................................ACGAGTTTCTCCGACGCGCTCA........ 22 1 7 0.14 1 1 0 0 0 0 0
........................................................................................................................................AAGTTTCTCCGACGCGCTCA........ 20 1 7 0.14 1 1 0 0 0 0 0
.......................................................................................................................................CGAGTTTCTCCGACGCGCTC......... 20 0 7 0.14 1 1 0 0 0 0 0
.....................................................................................................................................ACCGAGTTTCTCCGACGCGCTCA........ 23 1 7 0.14 1 1 0 0 0 0 0
.......................................................................................................................................CGAGTTTCTCCGACGCGC........... 18 0 7 0.14 1 1 0 0 0 0 0
.......................................................................................................................................CGAGTTTCTCCGACGCGCT.......... 19 0 7 0.14 1 0 0 1 0 0 0
......................................................................................................................................AAGAGTTTCTCCGACGCGCT.......... 20 2 8 0.13 1 1 0 0 0 0 0
..................................................................................................AAAACATGGGTTTGTCGACGT............................................. 21 3 8 0.13 1 1 0 0 0 0 0
..........................................................AAAGCTCCTCGGGGTGTGGT...................................................................................... 20 3 12 0.08 1 1 0 0 0 0 0
...........................................................................................GGGGTGACAAGCATGGGTT...................................................... 19 3 13 0.08 1 1 0 0 0 0 0
......................................................AAAAAAAGCTCTTCGACGTGT......................................................................................... 21 3 15 0.07 1 1 0 0 0 0 0
.....................................GAAGTCCGCGAGCCACTTA............................................................................................................ 19 3 18 0.06 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_singleton_32:5499-5662 + dps_2351 CAACGTGATGAAA---GATTTAGCT--CTGAGAGTGG-TAGCCCTTCAGGCCCTG--GGTTAATAATTTCGAGAAGCT--GC----ACACCAGGAC----AATTGGG------------ACCGCCACTATTGGTACCCAAACAGCTGCGAAGCCGTCGCACACCGGCT--------CAAAGAGGCTGCGCGAGTCGCCCCAA
droPer2 scaffold_205:27273-27438 + CAACGTGATGAAA---GATTTAGCC--CTGAGAGTGG-TAACCCTTCAGGCCCTGGTGGTCAACAATTTCGAGAAGCT--GC----ACACCAGGAC----AATTGAG------------ACCGCCACTACTGGTACCCAAACAGCTGCGAAGCCGCCGCACACCGGCT--------CAAAGAGGCTGCGCGAGTTGCCTCAA
droVir3 scaffold_13324:1678177-1678187 + AAA-GCGGTGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_3782:659-814 + GGACGTTATAGAGAGCATCCGTACTCTCTACGAGCGACTGGTTGCCCAGAAGG--ACGAGCAAGGAGGCAAAGAGGCGCCGAAAACCCACCAGGCGTCCCAG---ACGTCCCCCTTAATTCGACCGGTGGCGGAACCCAGGAGGAAGGG-T----------------------------------------GTTGGACCCAA
droBip1 scf7180000393385:23746-23938 + CACCATAGTGAGC---ATCCAAGCTCTCTATGAGCGGCTAGCCTCTCAGACGG--GCGAGCAGGGACGTAAGGAGGCGCCTAAATCACACCAGGCGTCACAA---ACATCGCCCCATATTCGACCGTTAGCGGAACCCAGGAGGAAGGG-AACAGGCCCAGACCCCCCCAACAACAAGAGGAGCAAGAGGGAGACTGCACAG
droKik1 scf7180000301551:1256-1276 - AGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTCCCCGAGTCCA--CCA
droTak1 scf7180000415234:1309-1415 + CAA---------------------------------------------------------------------GGAGCA--GC----AAACCCAGAA----GGTCTGG------------AACAAGGCCATCGGTACCCAAACCGATCCCAAGGAGCCGAAGCCCGCAC---CAGC-CAACGGAGACTCGCGTGCTGGACGGA
droEug1 scf7180000407242:48568-48569 + AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CAACGTGATGAAA---GATTTAGCT--CTGAGAGTGG-TAGCCCTTCAGGCCCTG--GGTTAATAATTTCGAGAAGCT--GC----ACACCAGGAC----AATTGGG------------ACCGCCACTATTGGTACCCAAACAGCTGCGAAGCCGTCGCACACCGGCT--------CAAAGAGGCTGCGCGAGTCGCCCCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----A.....................................................................................................22245.509108920000000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AA....................................................................................................23236.007206810000300
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----......................................................................................................21325.677707330100000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AAT...................................................................................................24224.004804500000300
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AATTG.................................................................................................2626.001201200000000
.AACGTGATGAAA---GATTTAGC..................................................................................................................................................................................2035.671701030300100
......................................................................GAGAAGCT--GC----ACACCAGGAC----AA....................................................................................................2225.501101100000000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AATT..................................................................................................2524.5090720000000
......................................................................GAGAAGCT--GC----ACACCAGGAC----A.....................................................................................................2124.0080800000000
.....................................................................CGAGAAGCT--GC----ACACCAGG............................................................................................................1933.671101100000000
.....................................................................CGAGAAGCT--GC----ACACCAGGA...........................................................................................................2033.671101010000000
...CGTGATGAAA---GATTTAGCT--CTGAGA.........................................................................................................................................................................2523.5070400000300
...CGTGATGAAA---GATTTAGCT--CTGAGAG........................................................................................................................................................................2623.0060400000200
...CGTGATGAAA---GATTTAGCT--CTGA...........................................................................................................................................................................2322.0040200000200
......................................................................GAGAAGCT--GC----ACACCAGGAC----AATTG.................................................................................................2522.0040400000000
...CGTGATGAAA---GATTTAGCT--TGA............................................................................................................................................................................2222.0040000000400
......................................................................GAGAAGCT--GC----ACACCAGGAC----AAT...................................................................................................2321.5030300000000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AAA...................................................................................................2421.5030300000000
.AACGTGATGAAA---GATTTAGCT--CTG............................................................................................................................................................................2421.5030100000200
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AAC...................................................................................................2421.0020200000000
......................................................................GAGAAGCT--GC----ACACCAGGAC----AATTGG................................................................................................2611.0010100000000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AATA..................................................................................................2521.0020200000000
.................................................................................C----ACACCAGGAC----AATTGGG------------ACCGCC.............................................................................2411.0010100000000
.........................................................................................................................................CAAACAGCTGCGAAGCCGTCGC...........................................2211.0010100000000
.......................................................................AGAAGCT--GC----ACACCAGGAC----AAT...................................................................................................2221.0020200000000
...CGTGATGAAA---GATTTAGCT--CTG............................................................................................................................................................................2221.0020200000000
...CGTGATGAAA---GATTTAGCT--CTGAG..........................................................................................................................................................................2421.0020200000000
...CGTGATGAAA---GATTTAGC..................................................................................................................................................................................1831.0030200000100
.............................................................................T--GC----ACACCAGGAC----AATTGGG------------ACCGCCA............................................................................2711.0010100000000
...CGTGATGAAA---GATTTAGCT--CT.............................................................................................................................................................................2121.0020200000000
.............................................................................T--GC----ACACCAGGAC----AATTGGG------------A..................................................................................2111.0010100000000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AAAA..................................................................................................2521.0020200000000
......................................................................GAGAAGCT--GC----ACACCAGGAC----......................................................................................................2031.0030300000000
............................................................TAATAATTTCGAGAAGCT--GC----ACAC................................................................................................................2411.0010010000000
.AACGTGATGAAA---GATTTAG...................................................................................................................................................................................1930.6720200000000
......................................................................GAGAAGCT--GC----ACACCAGGA...........................................................................................................1930.6720200000000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AT....................................................................................................2320.5010100000000
.......................................................................AGAAGCT--GC----ACACCAGGAC----AATTG.................................................................................................2420.5010100000000
...................................................................TTCGAGAAGCT--GC----ACACCAGGAC----AAT...................................................................................................2620.5010100000000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AAAAA.................................................................................................2620.5010100000000
....GTGATGAAA---GATTTAGCT--CTGA...........................................................................................................................................................................2220.5010100000000
...CGTGATGAAA---GATTTAGCT--CTGAGAGA.......................................................................................................................................................................2720.5010100000000
....GTGATGAAA---GATTTAGCT--CTGAGA.........................................................................................................................................................................2420.5010100000000
.....................................................................CGAGAAGCT--GC----ACACCAGGAA----......................................................................................................2140.5020200000000
..ACGTGATGAAA---GATTTAGCT--CTGAG..........................................................................................................................................................................2520.5010100000000
...CGTGATGAAA---GATTTAGCT--C..............................................................................................................................................................................2020.5010100000000
.....TGATGAAA---GATTTAGCT--CTGA...........................................................................................................................................................................2120.5010100000000
..................................................................................................................................TGGTACCCAAACAGCTGCGAAGCC................................................2450.4020200000000
..................................................................................................................................TGGTACCCAAACAGCTGCGAAGC.................................................2350.4020200000000
..................................................................................................................................TGGTACCCAAACAGCTGCGAAGCCG...............................................2550.4020200000000
.....................................................................CGAGAAGCT--GC----ACACCAG.............................................................................................................1830.3310000000100
.AACGTGATGAAA---GATTTAGCA--...............................................................................................................................................................................2130.3310100000000
...CGTGATGAAA---GATTTAG...................................................................................................................................................................................1730.3310000000100
.AACGTGATGAAA---GATTTAGA..................................................................................................................................................................................2030.3310100000000
..ACGTGATGAAA---GATTTAGC..................................................................................................................................................................................1930.3310100000000
......................................................................GAGAAGCT--GC----ACACCAGG............................................................................................................1830.3310100000000
....................................................................TCGAGAAGCT--GC----ACACCAGGAC----......................................................................................................2230.3310100000000
.....................................................................CGAGAAGCT--GC----ACACCAGGAT----......................................................................................................2130.3310100000000
...................................................................................................................................................................CGGCT--------CAAAGAGGCTGCGCGAGT........2370.2920200000000
..................................................................................................................................TGGTACCCAAACAGCTGCGAAT..................................................2250.2010100000000
..................................................................................................................................TGGTACCCAAACAGCTGCGAAGA.................................................2350.2010100000000
.........................................................................................................................................CAAACAGCTGCGAAGCCG...............................................1850.2010100000000
..............................................................................................................................................................CACACCGGCT--------CAAAGAGGCTGC..............2260.1710100000000
.............................................................................................................................................................GCACACCGGCT--------CAAAGAGGCTGC..............2360.1710100000000
..............................................................................................................................................................CACACCGGCT--------CAAAGAGGCTGCGCGA..........2660.1710000000100
..............................................................................................................................................................CACACCGGCT--------CAAAGAGGCTGCGCG...........2560.1710000100000
.................................................................................................................................................................ACCGGCT--------CAAAGAGGCTGCGCGAGT........2560.1710100000000
.......................................................................................................................................................................T--------CAAAGAGGCTGCGCGAG.........1870.1410100000000
.......................................................................................................................................................................T--------CAAAGAGGCTGCGCGAGAAA......2190.1110100000000
droPer2
CAACGTGATGAAA---GATTTAGCC--CTGAGAGTGG-TAACCCTTCAGGCCCTGGTGGTCAACAATTTCGAGAAGCT--GC----ACACCAGGAC----AATTGAG------------ACCGCCACTACTGGTACCCAAACAGCTGCGAAGCCGCCGCACACCGGCT--------CAAAGAGGCTGCGCGAGTTGCCTCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...CGTGATGAAA---GATTTAGCC--CTGAGA.........................................................................................................................................................................2526.00120120000
...CGTGATGAAA---GATTTAGCC--CTGAGAG........................................................................................................................................................................2625.50110110000
...CGTGATGAAA---GATTTAGCC--CTGAG..........................................................................................................................................................................2424.008080000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AAT...................................................................................................2451.608080000
...CGTGATGAAA---GATTTAGCC--CTGA...........................................................................................................................................................................2321.503030000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AATTG.................................................................................................2641.506060000
...............................................................................................C----AATTGAG------------ACCGCCACTACTG......................................................................2121.002200000
...CGTGATGAAA---GATTTAGCC--CTG............................................................................................................................................................................2221.002020000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AA....................................................................................................2350.804040000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----A.....................................................................................................2250.603030000
.........................................................................................CCAGGAC----AATTGAG------------ACCGCCACTAC........................................................................2520.501010000
....GTGATGAAA---GATTTAGCC--CTG............................................................................................................................................................................2120.501010000
........................................................................................................................CCGCCACTACTGGTACCCAAACAGCTGC......................................................2820.501010000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AATT..................................................................................................2540.502020000
........................................................................................ACCAGGAC----AATTGAG------------ACCGCCAC...........................................................................2320.501010000
.......................................................................................................................ACCGCCACTACTGGTACCCAAACAGC.........................................................2620.501010000
...CGTGATGAAA---GATTTAGCC--CTGAGAGA.......................................................................................................................................................................2720.501010000
......................................................................GAGAAGCT--GC----ACACCAGGAC----AATTGA................................................................................................2620.501010000
........................................................................................................GAG------------ACCGCCACTACTGGTACCCAA..............................................................2420.501010000
.AACGTGATGAAA---GATTTAGCC--CTGA...........................................................................................................................................................................2520.501010000
...CGTGATGAAA---GATTTAGCC--CTGAGAAA.......................................................................................................................................................................2720.501100000
......................................................................GAGAAGCT--GC----ACACCAGGAC----AATT..................................................................................................2440.502020000
.............................................................................................................................ACTACTGGTACCCAAACAGCTGCGA....................................................2520.501010000
....GTGATGAAA---GATTTAGCC--CTGAGA.........................................................................................................................................................................2420.501010000
...............................................................................................................................TACTGGTACCCAAACAGCTGCGAA...................................................2420.501010000
.....................................................................................................................................TACCCAAACAGCTGCGAAGCCGCC.............................................2420.501010000
................................................................................................................................ACTGGTACCCAAACAGCTGCGAAGCCG...............................................2720.501010000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----......................................................................................................2150.402020000
.....................................................................................................................................TACCCAAACAGCTGCGAAGCC................................................2130.331010000
........................................................................GAAGCT--GC----ACACCAGGAC----AATT..................................................................................................2240.251010000
......................................................................GAGAAGCT--GC----ACACCAGGAC----AATTG.................................................................................................2540.251010000
..................................TGG-TAACCCTTCAGGCCCTGGTGGTCA............................................................................................................................................2750.201010000
...........................................................................................................................................AACAGCTGCGAAGCCGCCGCACAC.......................................2450.201010000
.....................................................................CGAGAAGCT--GC----ACACCAGGAC----AAA...................................................................................................2450.201010000
..................................TGG-TAACCCTTCAGGCCCTGGTGGTCAA...........................................................................................................................................2850.201010000
...............................................................CAATTTCGAGAAGCT--GC----ACACCAGGAC----A.....................................................................................................2850.201010000
......................................................................GAGAAGCT--GC----ACACCAGGAC----AA....................................................................................................2260.171010000
......................................................................GAGAAGCT--GC----ACACCAGGAC----A.....................................................................................................2160.171010000
..........................................................................................................................................................GCCGCACACCGGCT--------CAAAGAGGCTG...............2570.141010000
..............................................................................................................................................................CACACCGGCT--------CAAAGAGGCTGCGCG...........2580.131010000
..................................TGG-TAACCCTTCAGGCAAA....................................................................................................................................................19200.051010000
droVir3
AAA-GCGGTGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droAna3
GGACGTTATAGAGAGCATCCGTACTCTCTACGAGCGACTGGTTGCCCAGAAGG--ACGAGCAAGGAGGCAAAGAGGCGCCGAAAACCCACCAGGCGTCCCAG---ACGTCCCCCTTAATTCGACCGGTGGCGGAACCCAGGAGGAAGGG-T----------------------------------------GTTGGACCCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................TAATTCGACCGGTGGCGGAACCCAGG.............................................................2632.006141000
..............GCATCCGTACTCTCTACGAGCGACTGG.................................................................................................................................................................27101.70171520000
..............GCATCCGTACTCTCTACGAGCGACTG..................................................................................................................................................................26101.40141400000
................................................................................................TCCCAG---ACGTCCCCCTTAATTCGACCGG...........................................................................2831.334400000
.......................................................................................................................................CCCAGGAGGAAGGG-T----------------------------------------GTTGGACC...23120.9211650000
..............GCATCCGTACTCTCTACGAGCGACT...................................................................................................................................................................25100.909720000
.....................................................................................................G---ACGTCCCCCTTAATTCGACCGGTG.........................................................................2530.672020000
.......................................................................................................................................CCCAGGAGGAAGGG-T----------------------------------------GTTGGA.....21130.547430000
.......................................................................................................................................CCCAGGAGGAAGGG-T----------------------------------------GTTGG......20130.466321000
....................................................................................................................................GAACCCAGGAGGAAGGG-T----------------------------------------GTTGGACCCA.28100.404310000
....................................................................................................................AATTCGACCGGTGGCGGAACCCAGGAG...........................................................2730.331100000
...................................................................................................CAG---ACGTCCCCCTTAATTCGACCGG...........................................................................2530.331100000
..............................................................................................................CCCCTTAATTCGACCGGTGGCGGAACC.................................................................2730.331010000
............................................................................................................TCCCCCTTAATTCGACCGGTGGCGG.....................................................................2530.331100000
....................................................................................................................AATTCGACCGGTGGCGGAACCCAGG.............................................................2530.331100000
.................................................................................................CCCAG---ACGTCCCCCTTAATTCGACCGG...........................................................................2730.331100000
............................................................................................................TCCCCCTTAATTCGACCGGTGGCGGAACC.................................................................2930.331010000
............................................................................................................TCCCCCTTAATTCGACCGGTGG........................................................................2230.331010000
...............................................................................................................CCCTTAATTCGACCGGTGGCGGAACC.................................................................2630.331100000
...................................................................................................................TAATTCGACCGGTGGCGGAACCC................................................................2330.331010000
................................................................................................TCCCAG---ACGTCCCCCTTAATTCGACC.............................................................................2630.331010000
.......................................................................................................................................CCCAGGAGGAAGGG-T----------------------------------------GTTGGAC....22120.334040000
............................................................................................................TCCCCCTTAATTCGACCGGTGGCGGAAC..................................................................2830.331010000
............................................................................................................TCCCCCTTAATTCGACCGGTGGCG......................................................................2430.331010000
..................................................................................................................TTAATTCGACCGGTGGCGGAACCCAG..............................................................2630.331010000
...................................................................................................................TAATTCGACCGGTGGCGGAACC.................................................................2230.331010000
..................................................................................................................TTAATTCGACCGGTGGCGGAACCC................................................................2430.331010000
...............................................................................................................CCCTTAATTCGACCGGTGGCGGAA...................................................................2430.331100000
....................................................................................................................AATTCGACCGGTGGCGGAACCC................................................................2230.331010000
...................................................................................................................TAATTCGACCGGTGGCGGAACCCAGGAA...........................................................2830.331100000
................................................................................................TCCCAG---ACGTCCCCCTTAATTCGAC..............................................................................2530.331010000
...................................................................................................CAG---ACGTCCCCCTTAATTCGACCGGTG.........................................................................2730.331100000
......................................................................................................................TTCGACCGGTGGCGGAACCCAGG.............................................................23130.314400000
..............GCATCCGTACTCTCTACGAGCGAC....................................................................................................................................................................24100.303030000
..................................................AGG--ACGAGCAAGGAGGCAAAGAG...............................................................................................................................2340.251100000
..........................................TGCCCAGAAGG--ACGAGCAAGGAGGCAA...................................................................................................................................2740.251100000
..................................................AGG--ACGAGCAAGGAGGCAAAGA................................................................................................................................2240.251100000
..................................................AGG--ACGAGCAAGGAGGCAAAG.................................................................................................................................2140.251100000
..........................................TGCCCAGAAGG--ACGAGCAAGGAGGCAAA..................................................................................................................................2840.251100000
....................................................................................................................................GAACCCAGGAGGAAGGG-T----------------------------------------GTTGG......23120.253300000
.......................................................................................................................................CCCAGGAGGAAGGG-T----------------------------------------GTTGGACCC..24100.202110000
.................................................................................................................................GCGGAACCCAGGAGGAAGGG-T----------------------------------------GTTG.......25100.202010010
..ACGTTATAGAGAGCATCCGTACT.................................................................................................................................................................................23110.182110000
..............GCATCCGTACTCTCTACGAG........................................................................................................................................................................20120.172200000
......................................................................................................................TTCGACCGGTGGCGGAACCCAG..............................................................22130.152020000
.......................................................................................................................TCGACCGGTGGCGGAACCCAGGAG...........................................................24130.152200000
........................TCTCTACGAGCGACTGGTTGC.............................................................................................................................................................2170.141100000
...............................................................................................................................TGGCGGAACCCAGGAGGAAGGG-T----------------------------------------GTT........26100.101100000
..............GCATCCGTACTCTCTACGAGCG......................................................................................................................................................................22100.101100000
.......................................................................................CACCAGGCGTCCCAG---ACGTCCCCCTT......................................................................................26100.101100000
...................................................................................AACCCACCAGGCGTCCCAG---ACGTCCCCC........................................................................................28100.101100000
....................................................................................................................................GAACCCAGGAGGAAGGG-T----------------------------------------GTTGGACCC..27100.101100000
.......................................................................................CACCAGGCGTCCCAG---ACGTCCCCC........................................................................................24100.101010000
.............AGCATCCGTACTCTCTACGAGC.......................................................................................................................................................................22100.101010000
.............AGCATCCGTACTCTCTACGAGCGACT...................................................................................................................................................................26100.101010000
GGACGTTATAGAGAGCATCCG.....................................................................................................................................................................................21110.091100000
..................CCGTACTCTCTACGAGCGACTGG.................................................................................................................................................................23110.091100000
................ATCCGTACTCTCTACGAGCGACT...................................................................................................................................................................23110.091010000
...............CATCCGTACTCTCTACGAGCGACTG..................................................................................................................................................................25110.091100000
...............CATCCGTACTCTCTACGAGCGACTGG.................................................................................................................................................................26110.091100000
GGACGTTATAGAGAGCATCCGTACTCT...............................................................................................................................................................................27110.091100000
..................................................................................AAACCCACCAGGCGTCCCAG---ACGTCC...........................................................................................26110.091100000
....................................................................................ACCCACCAGGCGTCCCAG---ACGTCC...........................................................................................24110.091010000
...............CATCCGTACTCTCTACGAGCGA.....................................................................................................................................................................22110.091100000
....................................................................................................................................GAACCCAGGAGGAAGGG-T----------------------------------------GTTGGAC....25120.081010000
........................................................................................................................................CCAGGAGGAAGGG-T----------------------------------------GTTGGACC...22120.081010000
................................................................................GAAAACCCACCAGGCGTCCCAG---ACGTC............................................................................................27120.081100000
................................................................................GAAAACCCACCAGGCGTCCCAG---ACG..............................................................................................25120.081100000
........................................................................................................................................CCAGGAGGAAGGG-T----------------------------------------GTTGGAC....21120.081100000
.......................................................................................................................................CCCAGGAGGAAGGG-T----------------------------------------GTTGGACCTT.25120.081100000
....................................................................................................................................GAACCCAGGAGGAAGGG-T----------------------------------------GTTGGA.....24120.081010000
.......................................................................................................................................CCCAGGAGGAAGGG-T----------------------------------------GTTGGACT...23120.081001000
.....................................................................................CCCACCAGGCGTCCCAG---ACGTCCC..........................................................................................24120.081001000
.....................................................................................................................................AACCCAGGAGGAAGGG-T----------------------------------------GTTGGACCT..26120.081100000
...................................................................................AACCCACCAGGCGTCCCAG---AC...............................................................................................21120.081010000
...........................................................................GCGCCGAAAACCCACCAGGCGTCCCAG---AC...............................................................................................29120.081010000
.......................................................................................................................TCGACCGGTGGCGGAACCCAGG.............................................................22130.081100000
......................................................................................................................................ACCCAGGAGGAAGGG-T----------------------------------------GTTGG......21130.081001000
.....................................................................................................................................AACCCAGGAGGAAGGG-T----------------------------------------GTTGG......22130.081010000
.......................................................................................................................TCGACCGGTGGCGGAACCCAGGA............................................................23130.081100000
.......................................................................................................................................CCCAGGAGGAAGGG-T----------------------------------------GTTGGTT....22130.081100000
.......................................................................................................................TCGACCGGTGGCGGAACCCA...............................................................20130.081100000
......................................................................................................................TTCGACCGGTGGCGGAACCCAGGA............................................................24130.081010000
.......................................................................................................................TCGACCGGTGGCGGAACCC................................................................19130.081100000
......................................................................................................................TTCGACCGGTGGCGGAACCCAGGAG...........................................................25130.081001000
......................................................................................................................TTCGACCGGTGGCGGAACCC................................................................20130.081010000
.......................................................................................................................TCGACCGGTGGCGGAACCCAGGAGG..........................................................25130.081100000
.....................................................................................................................................AACCCAGGAGGAAGGG-T----------------------------------------GTTG.......21140.071100000
............................................................................................................................CGGTGGCGGAACCCAGGAGGAAGGG-T----------------------------------------...........26140.071010000
...........................................................................................................................CCGGTGGCGGAACCCAGGAGG..........................................................21150.071100000
...............................................................................CGAAAACCCACCAGGCGTCCC......................................................................................................21150.071010000
...........................................................................................................................CCGGTGGCGGAACCCAGGAGGAT........................................................23150.071010000
.........................................................................................................................GACCGGTGGCGGAACCCAGGAGGAAGG......................................................27150.071010000
............................................................................CGCCGAAAACCCACCAGGCGTCCC......................................................................................................24150.071010000
.........................................................................................................................GACCGGTGGCGGAACCCAGGAGGAAA.......................................................26150.071100000
.................................................................................................................................GCGGAACCCAGGAGGAAGGG-....................................................20180.061100000
droBip1
CACCATAGTGAGC---ATCCAAGCTCTCTATGAGCGGCTAGCCTCTCAGACGG--GCGAGCAGGGACGTAAGGAGGCGCCTAAATCACACCAGGCGTCACAA---ACATCGCCCCATATTCGACCGTTAGCGGAACCCAGGAGGAAGGG-AACAGGCCCAGACCCCCCCAACAACAAGAGGAGCAAGAGGGAGACTGCACAGSizeHit CountTotal NormTotal
No Reads
droKik1
AGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTCCCCGAGTCCA--CCASizeHit CountTotal NormTotal
No Reads
droTak1
CAA---------------------------------------------------------------------GGAGCA--GC----AAACCCAGAA----GGTCTGG------------AACAAGGCCATCGGTACCCAAACCGATCCCAAGGAGCCGAAGCCCGCAC---CAGC-CAACGGAGACTCGCGTGCTGGACGGASizeHit CountTotal NormTotal
No Reads
droEug1
AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 04:15 AM