ID:

dps_2340

 Coordinate:

Unknown_singleton_2832:2977-3127 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.2 -4.1 -4.1

Flybase annnotation

exon [dpse_GLEANR_7097:3]; CDS [Dpse\GA27904-cds]; intron [Dpse\GA27904-in]

Repeatable elements

NameClassFamilyStrand
BEL-1_DPer-LTRLTRPao+
mature
  1. Unknown_group_332:1969-1991 -
  2. Unknown_group_332:9012-9034 +
  3. Unknown_group_698:598-620 +
  4. Unknown_group_698:5454-5476 -
  5. Unknown_group_698:9085-9107 +
  6. Unknown_group_29:8384-8406 +
  7. Unknown_singleton_1580:1510-1532 +
  8. Unknown_singleton_1570:201-223 +
  9. Unknown_group_588:827-849 +
  10. dps_2340  Unknown_singleton_2832:3033-3055 +
  11. Unknown_group_313:756-778 +
  12. Unknown_group_174:857-879 -
  13. Unknown_group_643:22757-22779 -
  14. Unknown_singleton_630:1904-1926 -
  15. Unknown_singleton_1683:54-76 +
  16. Unknown_singleton_1246:1099-1121 -
  17. Unknown_singleton_2754:812-834 +
  18. Unknown_singleton_2772:804-826 -
  19. Unknown_singleton_1985:332-354 +
star
  1. Unknown_group_698:629-653 +
  2. Unknown_group_698:5421-5445 -
  3. Unknown_group_698:9116-9140 +
  4. Unknown_group_310:8906-8930 -
  5. dps_2340  Unknown_singleton_2832:3064-3088 +
  6. Unknown_group_313:787-811 +
  7. Unknown_singleton_630:1871-1895 -
  8. Unknown_singleton_2754:843-867 +
  9. Unknown_singleton_2772:771-795 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACATACCGCGCGAATACCCAATAACTACATGAACAATATATATATATATACACACAACGAAACCCATCGGCCTTTCCCTTCTGTGACGACTGCTAGGAGTTTATACTGGAACATACACCTCGCCGTTGGATAATTGATCCTCGATCCGCTCCACTACAAACAACTAGTGAATTTTAACATTTAATCCTCTATTCCTTGTAGGATCTGGAGAATGTATTGCGCTCCCACTCTGACGAATGGCTCGAGAAGAT
**********************************************************************************************************((((...........((((..((((.....)))).))....)))))).........***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 SRR902011
testis
 GSM343916
embryo
 V112
male body		 M062
head
 GSM444067
head
..........................................................................................................TGGAACATACACCTCGCCGTTGG.......................................................................................................................... 23 0 19 32.63 620 587 22 4 4 3 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGGA......................................................................................................................... 24 0 19 16.37 311 289 12 1 7 1 1 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTG........................................................................................................................... 22 0 19 13.00 247 242 1 2 1 0 0 1 0
.........................................................................................................CTGGAACATACACCTCGCCGTTGG.......................................................................................................................... 24 0 18 5.83 105 95 5 0 2 0 3 0 0
..........................................................................................................TGGAACATACATCTCGCCGTTGG.......................................................................................................................... 23 1 19 3.68 70 70 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCGTTGGA......................................................................................................................... 25 0 18 3.28 59 52 5 0 1 0 1 0 0
..........................................................................................................TGGAACATACATCTCGCCGTTGGA......................................................................................................................... 24 1 19 2.84 54 53 0 1 0 0 0 0 0
..............................................TATACACACAACGAAACCCATCGGCC................................................................................................................................................................................... 26 0 13 2.62 34 28 2 2 1 1 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGGAT........................................................................................................................ 25 0 17 2.00 34 31 2 1 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCGTTG........................................................................................................................... 23 0 18 2.00 36 36 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCATCGGCC................................................................................................................................................................................... 24 0 15 2.00 30 27 1 2 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGGATA....................................................................................................................... 26 0 17 1.94 33 31 2 0 0 0 0 0 0
..............................................TATACACACAACGAAACCCATCGGC.................................................................................................................................................................................... 25 0 13 1.92 25 23 0 1 0 1 0 0 0
...........................................................................................................GGAACATACACCTCGCCGTTGG.......................................................................................................................... 22 0 20 1.90 38 34 3 1 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGGATAAT..................................................................................................................... 28 0 17 1.82 31 28 1 0 1 0 1 0 0
......................AACTACATGAACAATATATATATAT............................................................................................................................................................................................................ 25 0 5 1.80 9 0 8 0 1 0 0 0 0
......................AACTACATGAACAATATATATATA............................................................................................................................................................................................................. 24 0 6 1.67 10 1 9 0 0 0 0 0 0
......................AACTACATGAACAATATATATATATA........................................................................................................................................................................................................... 26 0 5 1.60 8 1 7 0 0 0 0 0 0
..............................................TATACACACAACGAAACCCATCGG..................................................................................................................................................................................... 24 0 13 1.54 20 19 0 0 1 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTT............................................................................................................................ 21 0 19 1.37 26 23 0 0 0 2 0 0 1
...........................................................................................................GGAACATACACCTCGCCGTTGGA......................................................................................................................... 23 0 20 1.35 27 27 0 0 0 0 0 0 0
.....................TAACTACATGAACAATATATATAG.............................................................................................................................................................................................................. 24 1 6 1.33 8 0 8 0 0 0 0 0 0
................................................TACACACAACGAAACCCATCGGC.................................................................................................................................................................................... 23 0 16 1.25 20 19 0 1 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGGATAA...................................................................................................................... 27 0 17 1.18 20 18 2 0 0 0 0 0 0
......................AACTACATGAACAATATATATAG.............................................................................................................................................................................................................. 23 1 6 1.17 7 1 6 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGT............................................................................................................................. 20 0 19 1.16 22 21 0 0 0 0 1 0 0
..........................................................................................................TGGAACATACATCTCGCCGTTG........................................................................................................................... 22 1 19 1.00 19 19 0 0 0 0 0 0 0
.....................TAACTACATGAACAATATATATATAT............................................................................................................................................................................................................ 26 0 5 1.00 5 1 4 0 0 0 0 0 0
...........................................................................................................GGAACATACACCTCGCCGTTG........................................................................................................................... 21 0 20 0.95 19 18 0 1 0 0 0 0 0
......................AACTACATGAACAATATATATATAA............................................................................................................................................................................................................ 25 1 7 0.86 6 0 6 0 0 0 0 0 0
......................AACTACATGAACAATATATATA............................................................................................................................................................................................................... 22 0 6 0.83 5 1 4 0 0 0 0 0 0
.........................................................................................................................................TCCTCGATCCGCTCCACTACAAACA......................................................................................... 25 0 9 0.78 7 7 0 0 0 0 0 0 0
......................................................................................................................................TGATCCTCGATCCGCTCCACTA............................................................................................... 22 0 9 0.78 7 7 0 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAGTTTAT................................................................................................................................................... 25 0 4 0.75 3 0 3 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAGTTTATA.................................................................................................................................................. 26 0 4 0.75 3 1 2 0 0 0 0 0 0
................................................TACACACAACGAAACCCATCGGCCT.................................................................................................................................................................................. 25 0 15 0.73 11 9 0 2 0 0 0 0 0
.........................................................................................................CTGGAACATACATCTCGCCGTTGGA......................................................................................................................... 25 1 18 0.72 13 13 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCATCGGCCTT................................................................................................................................................................................. 26 0 13 0.69 9 9 0 0 0 0 0 0 0
..............................................................................................AGGAGTTTATACTGGAACATAC....................................................................................................................................... 22 0 3 0.67 2 0 2 0 0 0 0 0 0
.....................TAACTACATGAACAATATATATA............................................................................................................................................................................................................... 23 0 6 0.67 4 0 4 0 0 0 0 0 0
.....................TAACTACATGAACAATATATATATATA........................................................................................................................................................................................................... 27 0 5 0.60 3 0 3 0 0 0 0 0 0
............................................TATATACACACAACGAAACCCATC....................................................................................................................................................................................... 24 0 7 0.57 4 3 1 0 0 0 0 0 0
..............TACCTAATAACTACATGAACAATA..................................................................................................................................................................................................................... 24 1 7 0.57 4 0 4 0 0 0 0 0 0
......................................................................................................................................TGATCCTCGATCCGCTCCACTACAA............................................................................................ 25 0 9 0.56 5 5 0 0 0 0 0 0 0
..............................................TATACACACAACGAAACCCATCG...................................................................................................................................................................................... 23 0 13 0.54 7 6 0 0 0 1 0 0 0
..........................................................................................................TGGAACATACATCTCGCCGTTGGAT........................................................................................................................ 25 1 17 0.53 9 9 0 0 0 0 0 0 0
.....................TAACTACATGAACAATATATATATA............................................................................................................................................................................................................. 25 0 6 0.50 3 0 3 0 0 0 0 0 0
..........................................................................TCCCTTCTGTGACGACTGCTAGGAGTT...................................................................................................................................................... 27 0 2 0.50 1 1 0 0 0 0 0 0 0
.................................................................................TGTGACGACTGCTAGGAGTTTATAC................................................................................................................................................. 25 0 4 0.50 2 0 2 0 0 0 0 0 0
........................................................................TTTCCCTTCTGTGACGACTGCTAGGAG........................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0 0 0 0
.....................TAACTACATGAACAATATATATAT.............................................................................................................................................................................................................. 24 0 6 0.50 3 1 2 0 0 0 0 0 0
.......................................................AACGAAACCCATCGGCCTTTCCC............................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0 0 0
..........................................................................TCCCTTCTGTGACGACTGCTAGGA......................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0
....................................TATATATATATATACACACAACGAA.............................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACATCTCGCCGTTGG.......................................................................................................................... 24 1 18 0.50 9 9 0 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAGTTTATAC................................................................................................................................................. 27 0 4 0.50 2 2 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCG.............................................................................................................................. 19 0 20 0.50 10 10 0 0 0 0 0 0 0
..................................................................................................................................TAATTGATCCTCGATCCGCTCCAC................................................................................................. 24 0 9 0.44 4 1 0 1 1 0 1 0 0
.........................................................................................................CTGGAACATACATCTCGCCGTTG........................................................................................................................... 23 1 18 0.44 8 8 0 0 0 0 0 0 0
...........................................................................................................GGAACATACACCTCGCCGTTGGATAA...................................................................................................................... 26 0 18 0.44 8 8 0 0 0 0 0 0 0
............................................TATATACACACAACGAAACCCATCGGC.................................................................................................................................................................................... 27 0 7 0.43 3 3 0 0 0 0 0 0 0
..........CGAATACCCAATAACTACATGAACAA....................................................................................................................................................................................................................... 26 0 5 0.40 2 0 2 0 0 0 0 0 0
...........................................................................................................GGAACATACACCTCGCCGTTGGAT........................................................................................................................ 24 0 18 0.39 7 6 1 0 0 0 0 0 0
..........................................................................................................TGGAACATACATCTCGCCGTTGGATAAT..................................................................................................................... 28 1 17 0.35 6 5 0 1 0 0 0 0 0
...........................................................................................................GGAACATACATCTCGCCGTTGG.......................................................................................................................... 22 1 20 0.35 7 7 0 0 0 0 0 0 0
...........................................................................................................GGAACATACATCTCGCCGTTGGA......................................................................................................................... 23 1 20 0.35 7 7 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCGTT............................................................................................................................ 22 0 18 0.33 6 6 0 0 0 0 0 0 0
.................................................................................................................TACACCTCGCCGTTGGATAATTGATC................................................................................................................ 26 0 9 0.33 3 0 3 0 0 0 0 0 0
.......GCGCGAATACCCAATAACTACATGAAC......................................................................................................................................................................................................................... 27 0 6 0.33 2 0 2 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCGT............................................................................................................................. 21 0 18 0.33 6 6 0 0 0 0 0 0 0
.........................................................................................................................................TCCTCGATCCGCCCCACTACAAACAAC....................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0 0
...............................................................................................GGAGTTTATACTGGAACATACACCTC.................................................................................................................................. 26 0 3 0.33 1 0 0 0 1 0 0 0 0
......................................................................................................................................TGATCCTCGATCCGCTCCACTACA............................................................................................. 24 0 9 0.33 3 3 0 0 0 0 0 0 0
..................................................................................................................................TAATTGATCCTCGATCCGCTCCA.................................................................................................. 23 0 9 0.33 3 3 0 0 0 0 0 0 0
..................................................................................................................................TAATTGATCCTCGATCCGCTCC................................................................................................... 22 0 9 0.33 3 3 0 0 0 0 0 0 0
.............................................................................................TAGGAGTTTATACTGGAACATACACC.................................................................................................................................... 26 0 3 0.33 1 0 0 1 0 0 0 0 0
......................AACTACATGAACAATATATATATATATATA....................................................................................................................................................................................................... 30 1 3 0.33 1 0 1 0 0 0 0 0 0
..............................................TATACACACAACGAAACCCAGCGGC.................................................................................................................................................................................... 25 1 13 0.31 4 3 0 1 0 0 0 0 0
...............................................ATACACACAACGAAACCCATCGG..................................................................................................................................................................................... 23 0 13 0.31 4 4 0 0 0 0 0 0 0
..............................................TATACACACAACGAAACCCATCGGCCT.................................................................................................................................................................................. 27 0 13 0.31 4 3 0 1 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGACGTTGG.......................................................................................................................... 23 1 20 0.30 6 6 0 0 0 0 0 0 0
..............TACCTAATAACTACATGAACAATATA................................................................................................................................................................................................................... 26 1 7 0.29 2 0 2 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAGTTTATTTT................................................................................................................................................ 28 2 4 0.25 1 0 1 0 0 0 0 0 0
.......................................................................................................TACTGGAACATACACCTCGCCGTTGG.......................................................................................................................... 26 0 8 0.25 2 2 0 0 0 0 0 0 0
.................................................................................TGTGACGACTGCTAGGAG........................................................................................................................................................ 18 0 20 0.25 5 3 2 0 0 0 0 0 0
.................................................................................TGTGACGACTGCTAGGAGTTTATACAA............................................................................................................................................... 27 2 4 0.25 1 1 0 0 0 0 0 0 0
..............................................................................TTCTGTGACGACTGCTAGGAGTTTAT................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0 0
.................................................................................TGTGACGACTGCTAGGAGTTTATACTGT.............................................................................................................................................. 28 1 4 0.25 1 1 0 0 0 0 0 0 0
.......................................................................................................TACTGGAACATACACCTCGACGTTGG.......................................................................................................................... 26 1 8 0.25 2 2 0 0 0 0 0 0 0
.......................................................................................................TACTGGAGCATACACCTCGCCGTTGG.......................................................................................................................... 26 1 8 0.25 2 0 0 0 2 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCG.............................................................................................................................. 20 0 20 0.25 5 5 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCATCGG..................................................................................................................................................................................... 22 0 16 0.25 4 4 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACATCTCGCCGTTGGATA....................................................................................................................... 26 1 17 0.24 4 4 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCATCGGCCTTT................................................................................................................................................................................ 27 0 13 0.23 3 2 0 0 1 0 0 0 0
...............................................ATACACACAACGAAACCCATCGGC.................................................................................................................................................................................... 24 0 13 0.23 3 3 0 0 0 0 0 0 0
......................................................................................................................................TGATCCTCGATCCGCTCCACTACAAA........................................................................................... 26 0 9 0.22 2 2 0 0 0 0 0 0 0
..................................................................................................................................TAATTGATCCTCGATCCGCTC.................................................................................................... 21 0 9 0.22 2 2 0 0 0 0 0 0 0
...........................................................................................................GGAACATACACCTCGCCGTTGGATAAT..................................................................................................................... 27 0 18 0.22 4 4 0 0 0 0 0 0 0
.................................................................................................................TACACCTCGCCGTTGGATAATTGATCC............................................................................................................... 27 0 9 0.22 2 2 0 0 0 0 0 0 0
..............................................TATACACACAACGAAACCCATCGGCT................................................................................................................................................................................... 26 1 14 0.21 3 2 0 1 0 0 0 0 0
..................................................CACACAACGAAACCCATCGGCCTT................................................................................................................................................................................. 24 0 14 0.21 3 3 0 0 0 0 0 0 0
..........................................................................................................TTGAACATACACCTCGCCGTTGG.......................................................................................................................... 23 1 19 0.21 4 1 1 2 0 0 0 0 0
..........................................................................................................TGGAACATACATCTCGCCGT............................................................................................................................. 20 1 19 0.21 4 4 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTA........................................................................................................................... 22 1 19 0.21 4 4 0 0 0 0 0 0 0
......................AACTACATGAACAATATATATGTATA........................................................................................................................................................................................................... 26 1 5 0.20 1 1 0 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGA......................................................................................................................................................... 19 0 20 0.20 4 2 2 0 0 0 0 0 0
......................AACTACATGAACAATATATATATATAA.......................................................................................................................................................................................................... 27 1 5 0.20 1 0 1 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAG........................................................................................................................................................ 20 0 20 0.20 4 4 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCTGTTGGATA....................................................................................................................... 27 1 16 0.19 3 0 3 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCGTTGGATA....................................................................................................................... 27 0 16 0.19 3 0 2 0 1 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGGATAAA..................................................................................................................... 28 1 17 0.18 3 3 0 0 0 0 0 0 0
..........CGAATACCCAATAACTACATG............................................................................................................................................................................................................................ 21 0 6 0.17 1 1 0 0 0 0 0 0 0
...TACCGCGCGAATACCCAATAACTACAT............................................................................................................................................................................................................................. 27 0 6 0.17 1 0 1 0 0 0 0 0 0
.....................TAACTACATGAACAATATCTATAT.............................................................................................................................................................................................................. 24 1 6 0.17 1 0 1 0 0 0 0 0 0
......................AACTACATGAACAATATATATAGT............................................................................................................................................................................................................. 24 2 6 0.17 1 0 1 0 0 0 0 0 0
......................................TATGTATATATACACACAACGAAACCCA......................................................................................................................................................................................... 28 1 6 0.17 1 1 0 0 0 0 0 0 0
......................................TATACATATATACACACAACGAAACCCA......................................................................................................................................................................................... 28 1 6 0.17 1 0 0 0 1 0 0 0 0
......................AACTACATGAACAATATATATAT.............................................................................................................................................................................................................. 23 0 6 0.17 1 0 1 0 0 0 0 0 0
.....................TAACTACATGAACAATATATATAC.............................................................................................................................................................................................................. 24 1 6 0.17 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACATCTCGCCGTT............................................................................................................................ 22 1 18 0.17 3 3 0 0 0 0 0 0 0
.................GCAATAACTACATGAACAATATATA................................................................................................................................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0 0
...........GAATACCCAATAACTACATGAACA........................................................................................................................................................................................................................ 24 0 6 0.17 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACATCTCGCCGTT............................................................................................................................ 21 1 19 0.16 3 3 0 0 0 0 0 0 0
.............................................ATATACACACAACGAAACCCATCGGCC................................................................................................................................................................................... 27 0 13 0.15 2 2 0 0 0 0 0 0 0
...............................................ATACACACAACGAAACCCAGCGG..................................................................................................................................................................................... 23 1 13 0.15 2 2 0 0 0 0 0 0 0
............................................................................................................GAACATACACCTCGCCGTTGGA......................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0
............................................................................................................GAACATACACCTCGCCGTTGG.......................................................................................................................... 21 0 20 0.15 3 3 0 0 0 0 0 0 0
...........................................................................................................GGAACATACATCTCGCCGTTG........................................................................................................................... 21 1 20 0.15 3 3 0 0 0 0 0 0 0
......................AACTACATGAACAATATATAT................................................................................................................................................................................................................ 21 0 7 0.14 1 1 0 0 0 0 0 0 0
.....................TAACTACATGAACAATATATATATAA............................................................................................................................................................................................................ 26 1 7 0.14 1 0 1 0 0 0 0 0 0
..........CGAATACCTAATAACTACATGAAC......................................................................................................................................................................................................................... 24 1 7 0.14 1 1 0 0 0 0 0 0 0
............................................TATATACACACAACGAAACCCATCGG..................................................................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0 0 0
............................................TATATACACACAACGAAACCCATCGGCC................................................................................................................................................................................... 28 0 7 0.14 1 1 0 0 0 0 0 0 0
......................AACTACATGAACAATATATATATG............................................................................................................................................................................................................. 24 1 7 0.14 1 1 0 0 0 0 0 0 0
.....................TAACTACATGAACAATATATATATG............................................................................................................................................................................................................. 25 1 7 0.14 1 0 0 0 1 0 0 0 0
.....................TAACTACATGAACAATATATAT................................................................................................................................................................................................................ 22 0 7 0.14 1 1 0 0 0 0 0 0 0
.............ATACCTAATAACTACATGAACAATA..................................................................................................................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0 0 0
........................................................................................................ACTGGAACATACACCTCGCCGTTGG.......................................................................................................................... 25 0 15 0.13 2 2 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCAGCGGCC................................................................................................................................................................................... 24 1 15 0.13 2 2 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCAGCGGCCT.................................................................................................................................................................................. 25 1 15 0.13 2 2 0 0 0 0 0 0 0
..................................................CACACAACGAAACCCATCGGCCT.................................................................................................................................................................................. 23 0 16 0.13 2 2 0 0 0 0 0 0 0
.......................................................................................................TACTGGAACATACATCTCGCCGTTGG.......................................................................................................................... 26 1 8 0.13 1 0 0 0 0 1 0 0 0
...TACCGCGCGAATACCTAATAACTACAT............................................................................................................................................................................................................................. 27 1 8 0.13 1 0 0 1 0 0 0 0 0
.......................................................................................................TACTGGAACATACACCTCGCCG.............................................................................................................................. 22 0 8 0.13 1 1 0 0 0 0 0 0 0
.......................................................................................................TACTGGAACATACACCTCGCCGTTGGA......................................................................................................................... 27 0 8 0.13 1 0 1 0 0 0 0 0 0
................................................TACACACAACGAAACCCATCG...................................................................................................................................................................................... 21 0 16 0.13 2 2 0 0 0 0 0 0 0
.......................................................................................................TACTGGAACATACACCTCGCCGTTG........................................................................................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCATC....................................................................................................................................................................................... 20 0 16 0.13 2 1 0 1 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGGATAATT.................................................................................................................... 29 0 17 0.12 2 2 0 0 0 0 0 0 0
..................................................CACACAACGAAACCCATCGGC.................................................................................................................................................................................... 21 0 17 0.12 2 2 0 0 0 0 0 0 0
..................................................CACACAACGAAACCCATCGG..................................................................................................................................................................................... 20 0 17 0.12 2 2 0 0 0 0 0 0 0
.........................TACATGAACAATATATATATAT............................................................................................................................................................................................................ 22 0 9 0.11 1 1 0 0 0 0 0 0 0
..................................................................................................................................TAATTGATCCTCGATCCGCTCCACTA............................................................................................... 26 0 9 0.11 1 1 0 0 0 0 0 0 0
.........................................................................................................................................TCCTCGATCCGCTCCACTACAAAC.......................................................................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0
............................................................................................................GAACATACACCTCGCCGTTGGATAAT..................................................................................................................... 26 0 18 0.11 2 0 2 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAGTTTA.................................................................................................................................................... 24 0 18 0.11 2 2 0 0 0 0 0 0 0
...................................................................................................................CACCTCGCCGTTGGATAATTGATCC............................................................................................................... 25 0 9 0.11 1 0 1 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCGTTGA.......................................................................................................................... 24 1 18 0.11 2 2 0 0 0 0 0 0 0
.......................................................................................................................................GATCCTCGATCCGCTCCACTACAAA........................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0 0
....................................................................................................................................ATTGATCCTCGATCCGCTCCACT................................................................................................ 23 0 9 0.11 1 1 0 0 0 0 0 0 0
......................AACTACATGAACAAT...................................................................................................................................................................................................................... 15 0 9 0.11 1 0 1 0 0 0 0 0 0
.........................................................................................................................................TCCTCGATCCGCTCCACTACAAA........................................................................................... 23 0 9 0.11 1 1 0 0 0 0 0 0 0
..............................................................................................................................TGGATAATTGATCCTCGATCCGCTC.................................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0 0
......................................................................................................................................TGATCCTCGATCCGCTCCACTACAAAC.......................................................................................... 27 0 9 0.11 1 1 0 0 0 0 0 0 0
......................................................................................................................................TGATCCTCGATCCGCTCCACTAC.............................................................................................. 23 0 9 0.11 1 1 0 0 0 0 0 0 0
......................................................................................................................................TGATCCTCGATCCGCTCCACTACAAACA......................................................................................... 28 0 9 0.11 1 1 0 0 0 0 0 0 0
.....................................................................................................................................TTGATCCTCGATCCGCTCCACTACAAAC.......................................................................................... 28 0 9 0.11 1 1 0 0 0 0 0 0 0
......................................................................................................................................TTATCCTCGATCCGCTCCACTACA............................................................................................. 24 1 9 0.11 1 0 0 1 0 0 0 0 0
...........................................................................................................................................CTCGATCCGCTCCACTACAAACA......................................................................................... 23 0 9 0.11 1 1 0 0 0 0 0 0 0
..................................................................................................................................TAATTGATCCTCGATCCGCTA.................................................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0 0
.................................................................................................................................TTAATTGATCCTCGATCCGCTCC................................................................................................... 23 1 9 0.11 1 1 0 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAGTTT..................................................................................................................................................... 23 0 18 0.11 2 2 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGGT......................................................................................................................... 24 1 19 0.11 2 2 0 0 0 0 0 0 0
.........................................................................................................ATGGAACATACACCTCGCCGTTGG.......................................................................................................................... 24 1 19 0.11 2 2 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACATCTCGCCGTTA........................................................................................................................... 22 2 19 0.11 2 2 0 0 0 0 0 0 0
................................................................................................................................GATAATTGATCCTCGATCCGC...................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCC............................................................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGACGTTGGA......................................................................................................................... 24 1 20 0.10 2 2 0 0 0 0 0 0 0
......................................................................................................................CTCGCCGTTGGATAATTGATCCTCGA........................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0 0
..............................................................................TTCTGTGACGACTGCTAGGAG........................................................................................................................................................ 21 0 20 0.10 2 2 0 0 0 0 0 0 0
...TACCGCGCGAATACCCAATAACT................................................................................................................................................................................................................................. 23 0 10 0.10 1 1 0 0 0 0 0 0 0
...TACCGCGCGAATACCCAATAACTAC............................................................................................................................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0
.............................................ATATACACATAACGGATCC........................................................................................................................................................................................... 19 3 20 0.10 2 0 0 2 0 0 0 0 0
......................................................................................................................CTCGCCGTTGGATAATTGATCC............................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAA........................................................................................................................................................ 20 1 20 0.10 2 1 1 0 0 0 0 0 0
.......................................................................................................................TCGCCGTTGGATAATTGATCCTCGA........................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0 0 0
...............................................................................................................................GGATAATTGATCCTCGATC......................................................................................................... 19 0 10 0.10 1 1 0 0 0 0 0 0 0
.......................................................................................................TACTGGAACATACACCTCGCCGTTGGAA........................................................................................................................ 28 1 10 0.10 1 1 0 0 0 0 0 0 0
......................................................................................................................CTCGCCGTTGGATAATTGATCCTCGATC......................................................................................................... 28 0 10 0.10 1 1 0 0 0 0 0 0 0
......................................................................................................................CTCGCCGTTGGATAATTGATCCTCGAT.......................................................................................................... 27 0 10 0.10 1 1 0 0 0 0 0 0 0
...TACCGCGCGAATACCCAAT..................................................................................................................................................................................................................................... 19 0 13 0.08 1 0 1 0 0 0 0 0 0
.............................................ATATACACACAACGAAACCCATCGGT.................................................................................................................................................................................... 26 1 13 0.08 1 1 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCATCGGCCTTTC............................................................................................................................................................................... 28 0 13 0.08 1 1 0 0 0 0 0 0 0
.............................................ATATACACACAACGAAACCCAT........................................................................................................................................................................................ 22 0 13 0.08 1 1 0 0 0 0 0 0 0
..............................................TATACACACCACGACACCCATCGGCC................................................................................................................................................................................... 26 2 13 0.08 1 0 0 0 0 1 0 0 0
..............................................TATACACACAACGAAACCCATAGG..................................................................................................................................................................................... 24 1 13 0.08 1 1 0 0 0 0 0 0 0
..............................................TATACACACAACGAAACCCAGCGGCC................................................................................................................................................................................... 26 1 13 0.08 1 0 0 0 0 0 0 1 0
................................................TACACACAACGAAACCCATCGGCCTTTCC.............................................................................................................................................................................. 29 0 13 0.08 1 0 0 1 0 0 0 0 0
..............................................TATACACACAACGAAACCCATC....................................................................................................................................................................................... 22 0 13 0.08 1 0 0 0 0 1 0 0 0
..............................................TATACAAACAACGAAACCCATCGGC.................................................................................................................................................................................... 25 1 13 0.08 1 0 0 0 0 1 0 0 0
......................................................................................................AGCCTGGAACATACACCTCGCCGTTGG.......................................................................................................................... 27 2 14 0.07 1 1 0 0 0 0 0 0 0
..............................................TATGCACTCAACGAAACCCATCGGCG................................................................................................................................................................................... 26 3 14 0.07 1 0 0 0 0 1 0 0 0
.............................................ATATACACACAACGAAACCCATCGGCT................................................................................................................................................................................... 27 1 14 0.07 1 1 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCATCGGCCC.................................................................................................................................................................................. 25 1 15 0.07 1 0 0 1 0 0 0 0 0
................................................TACACACAACGAAACCCATCGGAC................................................................................................................................................................................... 24 1 15 0.07 1 0 0 1 0 0 0 0 0
................................................TACACACAGCGAAACCCATCGGCC................................................................................................................................................................................... 24 1 15 0.07 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCGTTGGATAA...................................................................................................................... 28 0 16 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCGTTGGAT........................................................................................................................ 26 0 16 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACATCTCGCCGTTGGAT........................................................................................................................ 26 1 16 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCGTTGGATAAC..................................................................................................................... 29 1 16 0.06 1 0 0 0 0 0 1 0 0
.........................................................................................................CTGGAACATACACCTCGCCGTTGGGTAA...................................................................................................................... 28 1 16 0.06 1 1 0 0 0 0 0 0 0
..................................................CACACAACGAAACCCATCGGCC................................................................................................................................................................................... 22 0 16 0.06 1 1 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCAGCGGC.................................................................................................................................................................................... 23 1 16 0.06 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGGATT....................................................................................................................... 26 1 17 0.06 1 1 0 0 0 0 0 0 0
................................................TACACACAACGAAACCCATCGGCT................................................................................................................................................................................... 24 1 17 0.06 1 0 0 1 0 0 0 0 0
..........................................................................................................TGGAACGTACACCTCGCCGTTGGATAAT..................................................................................................................... 28 1 17 0.06 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGTACATACATCTCGCCGTTGGAT........................................................................................................................ 25 2 17 0.06 1 0 0 1 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGGTT........................................................................................................................ 25 1 17 0.06 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACATCTCGCCGTTGGATT....................................................................................................................... 26 2 17 0.06 1 1 0 0 0 0 0 0 0
...................................................ACACAACGAAACCCATCGGCCTTT................................................................................................................................................................................ 24 0 17 0.06 1 1 0 0 0 0 0 0 0
............................................TATATACACATAACGGATCC........................................................................................................................................................................................... 20 3 17 0.06 1 0 0 1 0 0 0 0 0
...................................................ACACAACGAAACCCAGCGGCCTTTCC.............................................................................................................................................................................. 26 1 17 0.06 1 1 0 0 0 0 0 0 0
...................................................ACACAACGAAACCCAGCGGCCTTT................................................................................................................................................................................ 24 1 17 0.06 1 1 0 0 0 0 0 0 0
...................................................ACACAACGAAACCCATCGGCCTT................................................................................................................................................................................. 23 0 17 0.06 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACATCTCGCCTTTGGAT........................................................................................................................ 25 2 17 0.06 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACATCTCGCCGTTGGATAATT.................................................................................................................... 29 1 17 0.06 1 0 0 1 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAGTT...................................................................................................................................................... 22 0 18 0.06 1 1 0 0 0 0 0 0 0
.................................................................................TGTGACGACTGCTAGGAGTTTA.................................................................................................................................................... 22 0 18 0.06 1 0 1 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAGTA...................................................................................................................................................... 22 1 18 0.06 1 1 0 0 0 0 0 0 0
...............................................................................................................CATACACCTCGCCGTTGGATAATTGA.................................................................................................................. 26 0 18 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................GAACATACATCTCGCCGTTGGATAATT.................................................................................................................... 27 1 18 0.06 1 1 0 0 0 0 0 0 0
..............................................................................TTCTGTGACGACTGCTAGGAGT....................................................................................................................................................... 22 0 18 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................GAACATACACCTCGCCGTTGGATAA...................................................................................................................... 25 0 18 0.06 1 1 0 0 0 0 0 0 0
.................................................................................................................TACACCTCGCCGTTGGATAATTGA.................................................................................................................. 24 0 18 0.06 1 0 1 0 0 0 0 0 0
.....................................................ACAACGAAACCCATCGGCCTTTCC.............................................................................................................................................................................. 24 0 18 0.06 1 1 0 0 0 0 0 0 0
...........................................................................................................GGAACATACATCTCGCCGTTGGATA....................................................................................................................... 25 1 18 0.06 1 1 0 0 0 0 0 0 0
.......................................................AACGAAACCCATCGGCCTTTCCA............................................................................................................................................................................. 23 1 18 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGCCGTTA........................................................................................................................... 23 1 18 0.06 1 1 0 0 0 0 0 0 0
.............................................................................................................AACATACACCTCGCCGTTGGAT........................................................................................................................ 22 0 18 0.06 1 1 0 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAGT....................................................................................................................................................... 21 0 18 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................GAACATACACCTCGCCGTTGGAT........................................................................................................................ 23 0 18 0.06 1 1 0 0 0 0 0 0 0
...................................................................................................................CACCTCGCCGTTGGATAATTG................................................................................................................... 21 0 18 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACATCTCGCCGT............................................................................................................................. 21 1 18 0.06 1 1 0 0 0 0 0 0 0
...........................................................................................................GGAACATACATCTCGCCGTTGGAT........................................................................................................................ 24 1 18 0.06 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGACGTTGGATAA...................................................................................................................... 27 1 18 0.06 1 1 0 0 0 0 0 0 0
............................................................................................................GAACATACACCTCGCCGTTGGATAATT.................................................................................................................... 27 0 18 0.06 1 1 0 0 0 0 0 0 0
..............................................................................................................ACATACACCTCGCCGTTGGATAAT..................................................................................................................... 24 0 18 0.06 1 1 0 0 0 0 0 0 0
.................................................................................TGTGACGACTGCTAGGAGTT...................................................................................................................................................... 20 0 18 0.06 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGACGTTG........................................................................................................................... 23 1 19 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTGT.......................................................................................................................... 23 1 19 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCTTTGG.......................................................................................................................... 23 1 19 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGACGTTGGA......................................................................................................................... 25 1 19 0.05 1 1 0 0 0 0 0 0 0
...................................................ACACAACGAAACCCCTCGGCC................................................................................................................................................................................... 21 1 19 0.05 1 0 0 0 0 1 0 0 0
..........................................................................................................TGGAGCATACACCTCGCCGTTGGA......................................................................................................................... 24 1 19 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................ATGGAACATACACCTCGCCGTTGGA......................................................................................................................... 25 1 19 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACATCTCGCCGCTGGATA....................................................................................................................... 26 2 19 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGCCGTTCGA......................................................................................................................... 24 1 19 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCTCGACGTTGG.......................................................................................................................... 24 1 19 0.05 1 0 0 0 0 0 1 0 0
..........................................................................................................TGGGACATACACCTCGCCGTTGG.......................................................................................................................... 23 1 19 0.05 1 1 0 0 0 0 0 0 0
...................................................ACACAACGAAACCCATCGGCCT.................................................................................................................................................................................. 22 0 19 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................TGCAACATACACCTCGCCGTT............................................................................................................................ 21 1 19 0.05 1 0 0 1 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCACCGTTGG.......................................................................................................................... 23 1 19 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................GGAACATACATCTCGCCTTTGG.......................................................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAAAA......................................................................................................................................................... 19 2 20 0.05 1 0 1 0 0 0 0 0 0
..............................................................................TTCTGTGACGACTGCTAGG.......................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................GGAACATACACCTCGCCGTTGGATAGAG.................................................................................................................... 28 3 20 0.05 1 0 1 0 0 0 0 0 0
...........................................................................................................GGAACATACACCTCGCCGTT............................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0
........................................................................................ATTGCTAGGAGGTTTTACT................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACATCTCGCCGCTGG.......................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................GTATCATACATCTCGCCGTTGGA......................................................................................................................... 23 3 20 0.05 1 0 0 1 0 0 0 0 0
............................................................................................................GAACATACACCTCGCCGTT............................................................................................................................ 19 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................ACATACACCTCGCCGTTGG.......................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................TTCTGTGACGACTGCTAGGA......................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
.............................................................................................................AACATACACCTCGCCGTTG........................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0
...........................................................................................................GGAACATACACCTCGCCGT............................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0 0 0
......................................................CAACGAAACCCATCGGCC................................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0
.........................................................................................................CTGGAACATACACCCCGCCGTTGG.......................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................TCCGTGACGACTGCTAGGAGA....................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................................................................CGATATTTTATCCTCGATCC........................................................................................................ 20 3 20 0.05 1 0 0 0 0 1 0 0 0
.........................................................................................................GTGGAACATACACCTCGACGTTG........................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0 0 0 0
....................................................CACAACGAAACCCATCGGC.................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0
..........................................................................................................TGGAACATACACCTCGACGTTG........................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0
..............................................................................................................ACATACACCTCGCCGTTG........................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0
...................................................ACACAACGAAACCCATCGGC.................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGCAGC....................................................................................................................................................... 21 2 20 0.05 1 0 0 0 1 0 0 0 0
...............................................................................................................CATACACCTCGCCGTTGG.......................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0
...............................................................................TCTGTGACGACTGCTAGGAAA....................................................................................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0 0

Anti-sense strand reads

TGTATGGCGCGCTTATGGGTTATTGATGTACTTGTTATATATATATATATGTGTGTTGCTTTGGGTAGCCGGAAAGGGAAGACACTGCTGACGATCCTCAAATATGACCTTGTATGTGGAGCGGCAACCTATTAACTAGGAGCTAGGCGAGGTGATGTTTGTTGATCACTTAAAATTGTAAATTAGGAGATAAGGAACATCCTAGACCTCTTACATAACGCGAGGGTGAGACTGCTTACCGAGCTCTTCTA
*****************************************************************************************((((...........((((..((((.....)))).))....)))))).........********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 GSM343916
embryo
 SRR902011
testis
 V112
male body		 M062
head
.........................................................................................GACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 27 0 3 274.67 824 576 178 61 7 2 0 0
.........................................................................................GACGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 26 0 4 136.25 545 248 273 4 2 18 0 0
..........................................................................................ACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 26 0 3 89.33 268 222 24 20 0 2 0 0
.....GGCGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 27 1 6 74.50 447 423 0 9 14 0 1 0
...........................................................................................CGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 25 0 3 73.33 220 165 16 36 1 2 0 0
.......CGCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 25 0 6 30.17 181 148 20 10 3 0 0 0
........GCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 24 0 6 29.50 177 132 28 4 12 0 1 0
..........................................................................................ACGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 25 0 4 28.75 115 93 17 2 2 1 0 0
............................................................................................GATCCTCAAATATGACCTTGTATG....................................................................................................................................... 24 0 3 24.67 74 71 2 1 0 0 0 0
.....GGCGCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 27 0 6 24.67 148 122 15 5 2 1 3 0
....................................................................................AGCCTGACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 32 3 3 23.00 69 0 69 0 0 0 0 0
...........................................................................................CGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 24 0 4 21.75 87 44 35 5 0 3 0 0
.....GGCGCGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 27 1 8 18.63 149 104 38 4 2 0 1 0
.........................................................................................GACGATCCTCAAATATGACCTTGTATGT...................................................................................................................................... 28 0 3 15.67 47 40 1 6 0 0 0 0
.........CGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 23 0 6 12.17 73 45 17 6 3 2 0 0
......GCGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 26 1 6 10.67 64 61 0 0 3 0 0 0
.............................................................................................ATCCTCAAATATGACCTTGTATG....................................................................................................................................... 23 0 3 10.33 31 27 3 1 0 0 0 0
.......CGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 25 1 6 10.17 61 57 0 3 1 0 0 0
.......CGCGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 25 1 8 8.75 70 51 13 2 1 0 3 0
.....GGCGCGCTTATGCGTTATTGATGTAC............................................................................................................................................................................................................................ 26 1 6 8.00 48 47 0 0 1 0 0 0
.........................................................................................AACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 27 1 3 7.67 23 20 0 3 0 0 0 0
..........GCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 22 0 6 7.33 44 40 2 0 0 1 1 0
............................................................................................GATCCTCAAATATGACCTTGTAT........................................................................................................................................ 23 0 4 7.00 28 24 3 0 0 1 0 0
......GCGCGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 26 1 8 6.75 54 33 19 0 2 0 0 0
......GCGCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 26 0 6 6.67 40 34 6 0 0 0 0 0
.......AGCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 25 1 6 6.67 40 37 0 1 0 0 2 0
..............................................................................................TCCTCAAATATGACCTTGTATG....................................................................................................................................... 22 0 3 5.67 17 17 0 0 0 0 0 0
...........................................................................................................................................GAGCTAGGCGAGGTGATGTTTGT......................................................................................... 23 0 9 5.11 46 36 5 1 0 3 1 0
..........................................................................................................................................GGAGCTAGGCGAGGTGATGTTTGT......................................................................................... 24 0 9 5.11 46 30 13 1 1 0 1 0
.......TGCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 25 1 6 5.00 30 27 0 1 1 0 1 0
.........................................................................................GACGATCCTCAAATATGACCTTGTAGG....................................................................................................................................... 27 1 3 4.67 14 0 0 14 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTTGTA......................................................................................................................................... 25 0 4 4.25 17 17 0 0 0 0 0 0
.....GGCGCGCTTATGGGTTATTGATGTAC............................................................................................................................................................................................................................ 26 0 6 3.83 23 18 2 0 1 0 2 0
.......CGCGCTTATGGGTTATTGATGTAC............................................................................................................................................................................................................................ 24 0 6 3.67 22 21 0 1 0 0 0 0
........GCGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 24 1 8 3.63 29 16 13 0 0 0 0 0
....TGGCGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 28 1 6 3.50 21 19 0 1 1 0 0 0
.........................................................................................................................................AGGAGCTAGGCGAGGTGATGTTTGT......................................................................................... 25 0 9 3.44 31 22 9 0 0 0 0 0
............................................................................................................................................AGCTAGGCGAGGTGATGTTTGT......................................................................................... 22 0 9 3.33 30 23 6 0 0 0 1 0
........................................................................................TGACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 28 0 3 3.33 10 6 0 4 0 0 0 0
..........................................................................................ACGATCCTCAAATATGACCTTGTATGT...................................................................................................................................... 27 0 3 3.00 9 7 1 1 0 0 0 0
...........................................................................................CGATCCTCAAATATGACCTTGTATGT...................................................................................................................................... 26 0 3 3.00 9 6 0 3 0 0 0 0
.............................................................................................ATCCTCAAATATGACCTTGTAT........................................................................................................................................ 22 0 4 3.00 12 3 8 0 0 1 0 0
..........GCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 22 1 6 2.83 17 17 0 0 0 0 0 0
........GCGCTTATGGGTTATTGATGTAC............................................................................................................................................................................................................................ 23 0 6 2.83 17 17 0 0 0 0 0 0
..........................................................................................ACGATCCTCAAATATGACCTTGTA......................................................................................................................................... 24 0 4 2.75 11 10 1 0 0 0 0 0
...........................................................................................CGATCCTCAAATATGACCTTGTA......................................................................................................................................... 23 0 4 2.75 11 11 0 0 0 0 0 0
.....GGCGCGCTTATGCGTTATTGATGTACTT.......................................................................................................................................................................................................................... 28 1 6 2.67 16 15 0 0 1 0 0 0
.............................................................................................................................................GCTAGGCGAGGTGATGTTTGT......................................................................................... 21 0 9 2.67 24 17 5 0 0 2 0 0
...............................................................................................CCTCAAATATGACCTTGTATG....................................................................................................................................... 21 0 3 2.67 8 7 0 1 0 0 0 0
........................................................................................TGACGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 27 0 4 2.50 10 7 0 2 0 0 1 0
...........................................................................................CGATCCTCAAATATGACCTTGTAGG....................................................................................................................................... 25 1 3 2.33 7 0 0 6 0 0 0 1
.........CGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 23 1 6 2.33 14 13 0 0 1 0 0 0
.......................................................................................CTGACGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 28 0 4 2.25 9 3 6 0 0 0 0 0
........................................................................................AGACGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 27 1 4 2.00 8 5 3 0 0 0 0 0
.........................................................................................................................CGGCAACCTATTAACTAGGAGCT........................................................................................................... 23 0 10 1.80 18 16 1 1 0 0 0 0
.........................................................................................AACGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 26 1 4 1.75 7 6 0 0 1 0 0 0
.....GGCGCGCTTATGGATTATTGATGTAC............................................................................................................................................................................................................................ 26 1 8 1.75 14 12 1 0 0 0 1 0
........................................................................................................................................TAGGAGCTAGGCGAGGTGATGTTTGT......................................................................................... 26 0 9 1.67 15 13 0 0 0 0 2 0
...........CTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 21 0 6 1.67 10 9 0 0 0 0 1 0
.......CGCGCTTATGCGTTATTGATGTAC............................................................................................................................................................................................................................ 24 1 6 1.67 10 10 0 0 0 0 0 0
....................................ATATACATATATATGTGTGTTGCTT.............................................................................................................................................................................................. 25 1 2 1.50 3 3 0 0 0 0 0 0
.....AGCGCGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 27 2 8 1.50 12 10 2 0 0 0 0 0
.........CGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 23 1 8 1.50 12 3 8 0 1 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTTGT.......................................................................................................................................... 24 0 4 1.50 6 4 2 0 0 0 0 0
................GGATTATTGATGTACTTGTTATATAT................................................................................................................................................................................................................. 26 1 7 1.43 10 0 9 0 1 0 0 0
...........................................................................................AGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 25 1 3 1.33 4 4 0 0 0 0 0 0
...........................................................................................................................................GAGCTAGGCGAGGTGATGTTTATT........................................................................................ 24 1 3 1.33 4 4 0 0 0 0 0 0
............................................................................................GATCCTCAAATATGACCTTGTATGT...................................................................................................................................... 25 0 3 1.33 4 1 3 0 0 0 0 0
........................................................................................CGACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 28 1 3 1.33 4 1 0 3 0 0 0 0
........................................................................................AGACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 28 1 3 1.33 4 2 1 1 0 0 0 0
..........GCTTATGGATTATTGATGTACTTGT........................................................................................................................................................................................................................ 25 1 7 1.29 9 1 8 0 0 0 0 0
............TTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 20 0 7 1.29 9 9 0 0 0 0 0 0
...................................................................................ACTGCTGACGATCCTCAAATATGACCT............................................................................................................................................. 27 0 4 1.25 5 3 0 1 1 0 0 0
................GGGTTATTGATGTACTTGTTATATAT................................................................................................................................................................................................................. 26 0 6 1.17 7 2 5 0 0 0 0 0
.......TGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 25 2 6 1.17 7 5 0 2 0 0 0 0
.......AGCGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 25 2 8 1.13 9 8 1 0 0 0 0 0
..................................................................................................................................ATTAACTAGGAGCTAGGCGAGGTGAT............................................................................................... 26 0 9 1.11 10 1 9 0 0 0 0 0
.............................................................................................ATCCTCAAATATGACCTTGTATGT...................................................................................................................................... 24 0 3 1.00 3 1 2 0 0 0 0 0
..........................................................................................ACGATCCTCAAATATGACCTTGTATGTG..................................................................................................................................... 28 0 3 1.00 3 3 0 0 0 0 0 0
..........GCTTATGGGTTATTGATGTAC............................................................................................................................................................................................................................ 21 0 6 1.00 6 6 0 0 0 0 0 0
.......CGCGCTTATGGATTATTGATGTAC............................................................................................................................................................................................................................ 24 1 8 1.00 8 8 0 0 0 0 0 0
..........................................................................................ACGATCCTCAAATATGACCTTGTAGG....................................................................................................................................... 26 1 3 1.00 3 0 0 3 0 0 0 0
.....TGCGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 27 2 6 1.00 6 5 0 0 1 0 0 0
..........................................................................................ACGATCCTCAAATATGACCTTGTATGA...................................................................................................................................... 27 1 3 1.00 3 0 3 0 0 0 0 0
.........TGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 23 1 6 1.00 6 6 0 0 0 0 0 0
.........AGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 23 1 6 1.00 6 6 0 0 0 0 0 0
......................................................................................GCTGACGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 29 0 4 1.00 4 4 0 0 0 0 0 0
........................................................................................CGACGATCCTCAAATATGACCTTGTAGG....................................................................................................................................... 28 2 3 1.00 3 0 0 3 0 0 0 0
......................................................................................GCTGACGATCCTCAAATATGACCTTGT.......................................................................................................................................... 27 0 4 1.00 4 1 3 0 0 0 0 0
..............ATGGGTTATTGATGTACTTGTTAT..................................................................................................................................................................................................................... 24 0 6 1.00 6 0 6 0 0 0 0 0
....................................ATATACATATATATGTGTGTTGCTTT............................................................................................................................................................................................. 26 1 2 1.00 2 2 0 0 0 0 0 0
.............................................................................................ATCCTCAAATATGACCTTGTATGTG..................................................................................................................................... 25 0 3 1.00 3 3 0 0 0 0 0 0
.........................................................................................CACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 27 1 3 1.00 3 1 0 2 0 0 0 0
.....................................................................................................................................AACTAGGAGCTAGGCGAGGTGATGT............................................................................................. 25 0 9 0.89 8 3 1 0 0 3 1 0
........GCGCTTATGGGTTATTGATGTACTT.......................................................................................................................................................................................................................... 25 0 6 0.83 5 3 1 0 1 0 0 0
......GCGCGCTTATGCGTTATTGATGTAC............................................................................................................................................................................................................................ 25 1 6 0.83 5 5 0 0 0 0 0 0
........................................................................................................................................TAGGAGCTAGGCGAGGTGAT............................................................................................... 20 0 9 0.78 7 5 0 0 1 0 1 0
.........................................................................................GACGATCCTCAAATATGACCTT............................................................................................................................................ 22 0 4 0.75 3 3 0 0 0 0 0 0
.....................................................................................TGCTGACGATCCTCAAATATGACCT............................................................................................................................................. 25 0 4 0.75 3 2 0 1 0 0 0 0
........................................................................................CGACGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 27 1 4 0.75 3 0 0 0 0 3 0 0
......GCGCGCTTATGGATTATTGATGTAC............................................................................................................................................................................................................................ 25 1 8 0.75 6 6 0 0 0 0 0 0
......................................................................................GCTGACGATCCTCAAATATGACCTT............................................................................................................................................ 25 0 4 0.75 3 3 0 0 0 0 0 0
..........GCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 22 1 8 0.75 6 6 0 0 0 0 0 0
......................................................................................GCCGACGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 29 1 4 0.75 3 1 0 0 0 2 0 0
....TGGCGCGCTTATGCGTTATTGATGTAC............................................................................................................................................................................................................................ 27 1 6 0.67 4 2 0 1 0 0 1 0
...........................................................................................................................................GAGCTAGGCGAGGTGATGTTTAT......................................................................................... 23 1 9 0.67 6 5 0 0 1 0 0 0
.......................................................................................CTGACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 29 0 3 0.67 2 2 0 0 0 0 0 0
..........................................................................................ACGATCCCCAAATATGACCTTGTATG....................................................................................................................................... 26 1 3 0.67 2 2 0 0 0 0 0 0
....................................................................................................................................TAACTAGGAGCTAGGCGAGGTGATGT............................................................................................. 26 0 9 0.67 6 0 6 0 0 0 0 0
.....GGCGCGCTTATGCGTTATTGATGTA............................................................................................................................................................................................................................. 25 1 6 0.67 4 4 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTTGTACG....................................................................................................................................... 27 1 3 0.67 2 0 0 2 0 0 0 0
...............................................................................................CCTCAAATATGACCTTGTAGG....................................................................................................................................... 21 1 3 0.67 2 0 0 2 0 0 0 0
.....TGCGCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 27 1 6 0.67 4 4 0 0 0 0 0 0
..........................................................................................ACGATCCTCAAATATGACCTTGTATGC...................................................................................................................................... 27 1 3 0.67 2 2 0 0 0 0 0 0
............................................................................................................................................AGCTAGGCGAGGTGATGTTTATT........................................................................................ 23 1 3 0.67 2 2 0 0 0 0 0 0
.........CGCTTATGGGTTATTGATGTAC............................................................................................................................................................................................................................ 22 0 6 0.67 4 3 0 0 1 0 0 0
.....AGCGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 27 2 6 0.67 4 4 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTTGTATGC...................................................................................................................................... 28 1 3 0.67 2 1 0 1 0 0 0 0
..........................................................................................TCGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 26 1 3 0.67 2 1 0 1 0 0 0 0
...............TGGGTTATTGATGTACTTGTTAT..................................................................................................................................................................................................................... 23 0 6 0.67 4 1 3 0 0 0 0 0
.........................................................................................AACGATCCTCAAATATGACCTTGTATGT...................................................................................................................................... 28 1 3 0.67 2 2 0 0 0 0 0 0
.........................................................................................CACGATCCTCAAATATGACCTTGTAGG....................................................................................................................................... 27 2 3 0.67 2 0 0 2 0 0 0 0
................GGGTTATTGATGTACTTGTTATAT................................................................................................................................................................................................................... 24 0 6 0.67 4 0 3 0 0 0 1 0
......GCGCGCTTATGGGTTATTGATGTAC............................................................................................................................................................................................................................ 25 0 6 0.67 4 4 0 0 0 0 0 0
...........................................................................................TGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 25 1 3 0.67 2 0 2 0 0 0 0 0
.......AGCGCTTATGGGTTATTGATGTAC............................................................................................................................................................................................................................ 24 1 6 0.67 4 4 0 0 0 0 0 0
.....TGCGCGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 27 2 8 0.63 5 4 0 1 0 0 0 0
.....................................................................................................................GGAGCGGCAACCTATTAACTAGGAGCT........................................................................................................... 27 0 10 0.60 6 6 0 0 0 0 0 0
..........................................................................................................................GGCAACCTATTAACTAGGAGCT........................................................................................................... 22 0 10 0.60 6 6 0 0 0 0 0 0
.....................................................................................................................GGAGCGGCAACCTATTAACTAGGAG............................................................................................................. 25 0 10 0.60 6 6 0 0 0 0 0 0
.............TATGGGTTATTGATGTACTTGT........................................................................................................................................................................................................................ 22 0 7 0.57 4 0 3 0 1 0 0 0
..........................................ATATATATGTGTGTTGCTTTGGGT......................................................................................................................................................................................... 24 0 7 0.57 4 0 2 0 0 2 0 0
.........CGCTTATGGATTATTGATGTACTTGT........................................................................................................................................................................................................................ 26 1 7 0.57 4 0 4 0 0 0 0 0
..............ATGGATTATTGATGTACTTGTTATAT................................................................................................................................................................................................................... 26 1 7 0.57 4 0 4 0 0 0 0 0
..........................................................................................................................................AGAGCTAGGCGAGGTGATGTTTGT......................................................................................... 24 1 9 0.56 5 5 0 0 0 0 0 0
........................................................................................................................................AAGGAGCTAGGCGAGGTGATGT............................................................................................. 22 1 9 0.56 5 0 5 0 0 0 0 0
................................................................................................................................CTATTAACTAGGAGCTAGGCGAGGT.................................................................................................. 25 0 9 0.56 5 1 0 0 0 3 1 0
...................................................................................................................................TTAACTAGGAGCTAGGCGAGGTGAT............................................................................................... 25 0 9 0.56 5 2 3 0 0 0 0 0
...............................................................................................................................................TAGGCGAGGTGATGTTTGT......................................................................................... 19 0 10 0.50 5 5 0 0 0 0 0 0
..............ATGGGTTATTGATGTACTTGTTATAT................................................................................................................................................................................................................... 26 0 6 0.50 3 0 3 0 0 0 0 0
.........CGCTTATGGGTTATTGATGTACTTGT........................................................................................................................................................................................................................ 26 0 6 0.50 3 1 1 0 1 0 0 0
.....AGCGCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 27 1 6 0.50 3 3 0 0 0 0 0 0
.........................................................................................GACCATCCTCAAATATGACCTTGTAT........................................................................................................................................ 26 1 4 0.50 2 0 2 0 0 0 0 0
....................................ATTGATATATATATGTGTGTTGCTT.............................................................................................................................................................................................. 25 2 2 0.50 1 1 0 0 0 0 0 0
..............................................................................................TCCTCAAATATGACCTTGTAT........................................................................................................................................ 21 0 4 0.50 2 2 0 0 0 0 0 0
.....CGCGCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 27 1 6 0.50 3 1 2 0 0 0 0 0
....................TATTGATGTACTTGTTATATATAT............................................................................................................................................................................................................... 24 0 6 0.50 3 0 3 0 0 0 0 0
.......TGCGCTTATGGGTTATTGATGTAC............................................................................................................................................................................................................................ 24 1 6 0.50 3 3 0 0 0 0 0 0
..............................................................................................................................................CTAGGCGAGGTGATGTTTGT......................................................................................... 20 0 10 0.50 5 4 1 0 0 0 0 0
....................................ATTGATATATATATGTGTGTTGCT............................................................................................................................................................................................... 24 2 2 0.50 1 1 0 0 0 0 0 0
..........................................................................................ACGATCCTCAAATATGACCTTGT.......................................................................................................................................... 23 0 4 0.50 2 2 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTTGTATC....................................................................................................................................... 27 1 4 0.50 2 2 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGA................................................................................................................................................ 18 0 4 0.50 2 2 0 0 0 0 0 0
........TCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 24 1 6 0.50 3 2 0 1 0 0 0 0
.....GGCGCGCTTATGGATTATTGATGTA............................................................................................................................................................................................................................. 25 1 8 0.50 4 3 1 0 0 0 0 0
.........AGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 23 2 6 0.50 3 3 0 0 0 0 0 0
........GCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 24 1 6 0.50 3 3 0 0 0 0 0 0
........................GATGTACTTGTTATATATATATATA.......................................................................................................................................................................................................... 25 0 2 0.50 1 0 1 0 0 0 0 0
................................TGTTATATATATATATATGTGTGT................................................................................................................................................................................................... 24 0 2 0.50 1 0 1 0 0 0 0 0
....................................ATATATATATATATGTGTGTTGCTT.............................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................GAGCGGCAACCTATTAACTAGGAGCT........................................................................................................... 26 0 10 0.50 5 5 0 0 0 0 0 0
.......CGCGCTTATGGGTTATTGATGTACTT.......................................................................................................................................................................................................................... 26 0 6 0.50 3 1 0 0 2 0 0 0
.......................TGATGTACTTGTTATATATATATATAT......................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0 0 0
.....GGCGCGCTTATGGATTATTGATGTACTT.......................................................................................................................................................................................................................... 28 1 8 0.50 4 3 0 1 0 0 0 0
................................................................GTAGCCGGAAAGGGAAGACACTGCT.................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0
....................................ATATACATATATATGTGTGTTGCT............................................................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0
...............................................................GGTAGCCGGAAAGGGAAGACACTGCT.................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0 0
......ACGCGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 26 1 6 0.50 3 1 2 0 0 0 0 0
......................................................................................GCTGACGATCCTCAAATATGACCT............................................................................................................................................. 24 0 4 0.50 2 2 0 0 0 0 0 0
........ACGCTTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 24 1 6 0.50 3 1 0 1 0 0 1 0
.....................................................................................................................................AACTAGGAGCTAGGCGAGGTGATGTTT........................................................................................... 27 0 9 0.44 4 2 2 0 0 0 0 0
.......................................................................................................................................CTAGGAGCTAGGCGAGGTGATGTT............................................................................................ 24 0 9 0.44 4 1 3 0 0 0 0 0
.........................................................................................................................................AGGAGCTAGGCGAGGTGATGT............................................................................................. 21 0 9 0.44 4 4 0 0 0 0 0 0
...........................................................................................................................................GAGCTAGGCGAGGTGATGTTTG.......................................................................................... 22 0 9 0.44 4 4 0 0 0 0 0 0
..........................................................................................................................GGCAACCTATTAACTAGGAGCTAGGCG...................................................................................................... 27 0 10 0.40 4 3 0 0 0 1 0 0
.......................................................................................................................AGCGGCAACCTATTAACTAGGAGC............................................................................................................ 24 0 10 0.40 4 4 0 0 0 0 0 0
.........................................................................................................GACCTTGTATGTGGAGCGGCAACCT......................................................................................................................... 25 0 18 0.39 7 7 0 0 0 0 0 0
.......................................................................................................ATGACCTTGTATGTGGAGCGGCAA............................................................................................................................ 24 0 8 0.38 3 3 0 0 0 0 0 0
.......TGCGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 25 2 8 0.38 3 3 0 0 0 0 0 0
........ACGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 24 2 8 0.38 3 0 3 0 0 0 0 0
.........................................................................................GACGATCCTCAACTATGACCTTGTATG....................................................................................................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0
....................................................................................AGACTGACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 32 3 3 0.33 1 0 1 0 0 0 0 0
..........................................................................................ACGATCCTCAAATATGACCTCGTATGT...................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0
......GCGCGCTTATGCGTTATTGATGTACTT.......................................................................................................................................................................................................................... 27 1 6 0.33 2 2 0 0 0 0 0 0
........GCGCTTACGGGTTATTGATGTACT........................................................................................................................................................................................................................... 24 1 6 0.33 2 2 0 0 0 0 0 0
.........................................................................................AACGATCCTCAAATATGACCTTGTAGG....................................................................................................................................... 27 2 3 0.33 1 0 0 1 0 0 0 0
..........................................................................................GCGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 26 1 3 0.33 1 0 0 1 0 0 0 0
......................................................................................GCGGACCATCCTCAAATATT................................................................................................................................................. 20 3 6 0.33 2 2 0 0 0 0 0 0
...........................................................................................CGATCCTCAAATATGACCTTGTATGG...................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................................................................GGAGCTAGGCGAGGTGATGTTT........................................................................................... 22 0 9 0.33 3 3 0 0 0 0 0 0
.....AGCGCGCTTATGCGTTATTGATGTAC............................................................................................................................................................................................................................ 26 2 6 0.33 2 2 0 0 0 0 0 0
..............................................................................................TCCTCAAATATGACCTTGTATGT...................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................GACGGTCCTCAAATATGACCTTGTATGTG..................................................................................................................................... 29 1 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................ACGATCCTCAAATATGACCTGGTATGT...................................................................................................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0
............................................................................................GGTCCTCAAATATGACCTTGTATG....................................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTTGTACGC...................................................................................................................................... 28 2 3 0.33 1 0 0 1 0 0 0 0
...............................................................................................CCTCAAATATGACCTTGTATGTGGAG.................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0
............................................................................................GATCCTCAAATATGACCTTGTAGG....................................................................................................................................... 24 1 3 0.33 1 0 0 1 0 0 0 0
.............................................................................................ATCCTCAAATATGACCTTGTATGTA..................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0
.......CGCGCTTATGGGTTATTGATGTA............................................................................................................................................................................................................................. 23 0 6 0.33 2 2 0 0 0 0 0 0
......AAGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 26 3 6 0.33 2 2 0 0 0 0 0 0
...........................................................................................TGATCCTCAAATATGACCTTGTATGTG..................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGGCCTTGTATG....................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................ACGATACTCAAATATGACCTTGTATG....................................................................................................................................... 26 1 3 0.33 1 0 0 0 1 0 0 0
.........................................................................................CACGATCCTCAAATATGACCTTGTACGT...................................................................................................................................... 28 2 3 0.33 1 0 0 1 0 0 0 0
.............................................................................................ATCCTCAAATATGACCTTGTATGTGG.................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................................................................GGAGCTAGGCGAGGTGATGTTTATT........................................................................................ 25 1 3 0.33 1 1 0 0 0 0 0 0
...............................................................................................CCTCAAATATGACCTTGTATGTGGAGC................................................................................................................................. 27 0 3 0.33 1 0 0 1 0 0 0 0
.........................................................................................GACGATCCCCAAATATGACCTTGTATG....................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................GGCGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACATTGTATG....................................................................................................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0
...........................................................................................CGATCCTCAAATATGACCTTGTAAG....................................................................................................................................... 25 1 3 0.33 1 0 0 0 1 0 0 0
...........CTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 21 1 6 0.33 2 2 0 0 0 0 0 0
.........................................................................................GACGTTCCTCAAATATGACCTTGTATG....................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0
....................................ATTGATATATATATGTGTGTTG................................................................................................................................................................................................. 22 2 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTCGTATG....................................................................................................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0
.........................................................................................GACGATCCTCAGATATGACCTTGTATG....................................................................................................................................... 27 1 3 0.33 1 0 0 0 1 0 0 0
...........................................................................................AAATCCTCAAATATGACCTTGTATG....................................................................................................................................... 25 2 3 0.33 1 1 0 0 0 0 0 0
.....GGCGCGCTTATGGGTTATTGATGT.............................................................................................................................................................................................................................. 24 0 9 0.33 3 3 0 0 0 0 0 0
.........................................................................................GACGGTCCTCAAATATGACCTTGTAGG....................................................................................................................................... 27 2 3 0.33 1 0 0 1 0 0 0 0
..........GCTTATGGATTATTGATGTACTTGTT....................................................................................................................................................................................................................... 26 1 6 0.33 2 0 2 0 0 0 0 0
....................................................................................CGCCTGACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 32 2 3 0.33 1 0 1 0 0 0 0 0
.....GGCGCGCTTATGGGTTATTGATGTACTT.......................................................................................................................................................................................................................... 28 0 6 0.33 2 2 0 0 0 0 0 0
............................................................................................AATCCTCAAATATGACCTTGTATG....................................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................AAGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0
............................................................................................GATCCTCAAATATGAACTTGTATG....................................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................TCAAATATGACCTTGTATGT...................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0
...............................................................................................CCTCAAATATGACCTTGTATGTAGATC................................................................................................................................. 27 2 3 0.33 1 0 0 1 0 0 0 0
....CGGCGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 28 2 6 0.33 2 1 0 1 0 0 0 0
...........................GTACTTGTTATATATATATATATGTGT..................................................................................................................................................................................................... 27 0 3 0.33 1 0 1 0 0 0 0 0
..........................................................................................ACGATCCTCGGATATGACCTTGTAGG....................................................................................................................................... 26 3 3 0.33 1 0 0 1 0 0 0 0
............................................................................................CATCCTCAAATATGACCTTGTATGTG..................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................GACGATCCTCACATATGACCGTGTACG....................................................................................................................................... 27 3 3 0.33 1 0 0 0 1 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTGGTATGT...................................................................................................................................... 28 1 3 0.33 1 0 0 1 0 0 0 0
..........................................................................................AGGATCCTCAAATATGACCTTGTAGG....................................................................................................................................... 26 2 3 0.33 1 0 0 1 0 0 0 0
...............TGGGTTATTGATGTACTTGTTATAT................................................................................................................................................................................................................... 25 0 6 0.33 2 0 2 0 0 0 0 0
..................................................................................................CAAATATGACCTTGTATGTA..................................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTTGGATG....................................................................................................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0
.................................................................................................TCAAATATGACCTTGTATGTGGAGC................................................................................................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0
.....CGCGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 27 2 6 0.33 2 2 0 0 0 0 0 0
.........................................................................................GACGGTCCTCAAATATGACCTTGTATG....................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................................................................TGAGCTAGGCGAGGTGATGTTTGT......................................................................................... 24 1 9 0.33 3 3 0 0 0 0 0 0
.........................................................................................GACGATCCTCCAATATGACCTTGTATG....................................................................................................................................... 27 1 3 0.33 1 0 1 0 0 0 0 0
...........................................................................................CTATCCTCAAATATGACCTTGTATG....................................................................................................................................... 25 1 3 0.33 1 1 0 0 0 0 0 0
........................................................................................TGACGATCCTCAAATATGACCTTGTAGG....................................................................................................................................... 28 1 3 0.33 1 0 0 1 0 0 0 0
...........................................................................................CGATCCTCAAATATGACCTTGTATGTG..................................................................................................................................... 27 0 3 0.33 1 0 0 1 0 0 0 0
.........................................................................................GACGATCCTCAAATATGTCATTGTATG....................................................................................................................................... 27 2 3 0.33 1 0 0 1 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTTGTATGA...................................................................................................................................... 28 1 3 0.33 1 1 0 0 0 0 0 0
........................................................................................AAACGATCCTCAAATATGACCTTGTATG....................................................................................................................................... 28 2 3 0.33 1 1 0 0 0 0 0 0
...........................................................................................CGATCCTCAAATATGACCTTGTATGTA..................................................................................................................................... 27 1 3 0.33 1 0 0 1 0 0 0 0
.......................TGATGTACTTGTTATATATATAT............................................................................................................................................................................................................. 23 0 6 0.33 2 0 2 0 0 0 0 0
............................................................................................................................................AGCTAGGCGAGGTGATGTTT........................................................................................... 20 0 9 0.33 3 2 0 0 1 0 0 0
.........CGCTTATGCGTTATTGATGTACTT.......................................................................................................................................................................................................................... 24 1 6 0.33 2 2 0 0 0 0 0 0
......ACGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 26 2 6 0.33 2 2 0 0 0 0 0 0
.........................................................................................GACTATCCTCAAATATGACCTTGTATG....................................................................................................................................... 27 1 3 0.33 1 0 0 0 1 0 0 0
.........................................................................................GACGATCCTCAAATATGATCTTGTATG....................................................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................ATCCTCAAATATGACCTTGTATGG...................................................................................................................................... 24 1 3 0.33 1 1 0 0 0 0 0 0
...ATGGCGCGCTTATGCGTTATTGATGT.............................................................................................................................................................................................................................. 26 1 9 0.33 3 3 0 0 0 0 0 0
..........................................................................................ACGATCCTCAAATATGGCCTTGTATG....................................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0
........GCGCTTATGCGTTATTGATGTA............................................................................................................................................................................................................................. 22 1 6 0.33 2 2 0 0 0 0 0 0
.........................................................................................................................CGGCAACCTATTAACTAGGAGCTAGGC....................................................................................................... 27 0 10 0.30 3 2 0 1 0 0 0 0
........................................................................................................................GCGGCAACCTATTAACTAGGAGCT........................................................................................................... 24 0 10 0.30 3 3 0 0 0 0 0 0
...........................................................................................................CCTTGTATGTGGAGCGGCAACCT......................................................................................................................... 23 0 20 0.30 6 6 0 0 0 0 0 0
...ATGGCGCGCTTATGGGTTATTGAT................................................................................................................................................................................................................................ 24 0 10 0.30 3 3 0 0 0 0 0 0
.............TATGGATTATTGATGTACTTGTT....................................................................................................................................................................................................................... 23 1 7 0.29 2 0 2 0 0 0 0 0
...........ATTATGGGTTATTGATGTACT........................................................................................................................................................................................................................... 21 1 7 0.29 2 2 0 0 0 0 0 0
....AGGCGCGCTTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 28 2 7 0.29 2 2 0 0 0 0 0 0
..........................................ATATATATGTGTGTTGCTTT............................................................................................................................................................................................. 20 0 7 0.29 2 0 2 0 0 0 0 0
............TTATGCGTTATTGATGTACT........................................................................................................................................................................................................................... 20 1 7 0.29 2 2 0 0 0 0 0 0
.....GGCGCGCTTATGGGTTATTGATG............................................................................................................................................................................................................................... 23 0 11 0.27 3 3 0 0 0 0 0 0
........................................................................................................TGACCTTGTATGTGGAGCGGCAACCT......................................................................................................................... 26 0 15 0.27 4 4 0 0 0 0 0 0
.........................................................................................GACGACCCTCAAATATGACCTTGTAT........................................................................................................................................ 26 1 4 0.25 1 0 1 0 0 0 0 0
........................................................................................TGACGATCCTCAAATATGACCTT............................................................................................................................................ 23 0 4 0.25 1 0 0 1 0 0 0 0
.........................................................................................AACGATCCTCAAATATGATCTTGTA......................................................................................................................................... 25 2 4 0.25 1 1 0 0 0 0 0 0
....................................................................................CGGCTGACGATCCTCAAATATGACCT............................................................................................................................................. 26 1 4 0.25 1 0 0 1 0 0 0 0
..........................................................................................ACGATCCTCAAATATGAACTTGTAT........................................................................................................................................ 25 1 4 0.25 1 1 0 0 0 0 0 0
...........................................................................................CGATCCTCAAATATGACCCTGTAT........................................................................................................................................ 24 1 4 0.25 1 1 0 0 0 0 0 0
..........................................................................................ACGATCCTCAAATATGACCTCGTAT........................................................................................................................................ 25 1 4 0.25 1 1 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTTATAT........................................................................................................................................ 26 1 4 0.25 1 1 0 0 0 0 0 0
.........CGCTTATGGATTATTGATGTACTT.......................................................................................................................................................................................................................... 24 1 8 0.25 2 0 2 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGAAT.............................................................................................................................................. 20 2 4 0.25 1 1 0 0 0 0 0 0
.........................................................................................GACGTTCCTCAAATATGACCTTGTAT........................................................................................................................................ 26 1 4 0.25 1 1 0 0 0 0 0 0
...........................................................................................CGATCCTCAAATATGACC.............................................................................................................................................. 18 0 4 0.25 1 1 0 0 0 0 0 0
.......................................................................................CCGACGATCCTCAAATATGACCTTGTAT........................................................................................................................................ 28 1 4 0.25 1 1 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGAC............................................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0 0
...................................................................................ACTGCTGACGATCCTCAAATATGACCTT............................................................................................................................................ 28 0 4 0.25 1 1 0 0 0 0 0 0
..................................................................................CACTGCTGACGATCCTCAAATATGACCT............................................................................................................................................. 28 0 4 0.25 1 1 0 0 0 0 0 0
.......................................................................................................ATGACCTTGTATGTGGAGCGGCAACCT......................................................................................................................... 27 0 8 0.25 2 2 0 0 0 0 0 0
........................................................................................TGACGATCCTCAAATATGACCTTGTA......................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
.................................................................................ACACTGCTGACGATCCTCAAATAT.................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0 0
........................................................................................TGACGATCCTCAAATATGACCTTGT.......................................................................................................................................... 25 0 4 0.25 1 1 0 0 0 0 0 0
........GCGCTTATGGATTATTGATGTAC............................................................................................................................................................................................................................ 23 1 8 0.25 2 2 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACCTTGTC......................................................................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0
...........................................................................................CGACCCTCAAATATGACCTTGTAT........................................................................................................................................ 24 1 4 0.25 1 1 0 0 0 0 0 0
.........................................................................................GACGATCCTCAAATATGACC.............................................................................................................................................. 20 0 4 0.25 1 1 0 0 0 0 0 0
.............................................................................................ATCCTCAAATATGACCTTGTA......................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0
..................................................................................AACTGCTGACGATCCTCAAATATGACCTT............................................................................................................................................ 29 1 4 0.25 1 1 0 0 0 0 0 0
................................................................................GACACTGCTGACGATCCTCAAATAT.................................................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0 0
...................................................................................ACTGCTGACGATCCTCAAATA................................................................................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0 0
....TGGCGCGCTTATGGATTATTGATGTACT........................................................................................................................................................................................................................... 28 1 8 0.25 2 1 0 1 0 0 0 0
..................................................................................CACTGCTGACGATCCTCAAATATGTCCT............................................................................................................................................. 28 1 4 0.25 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_singleton_2832:2927-3177 + dps_2340 ACATACCGCGCGAATACCCAATAACTACATGAACAATATATATATATATACACACAACGAAACCCATCGGCCTTTCCCTTCTGTGACGACTGCTAGGAGTTTATACTGGAACATACACCTCGCCGTTGGATAATTGATCCTCGATCCGCTCCACTACAAACAACTAGTGAATTTTAACAT---------------TTAATC-CTCTATTCCTT------GTAGGATCTGGAGAATGTATTGCGCTCCCACTCTGACGAATGGCTCGAGAAGAT
droPer2 scaffold_57:7292-7465 + ACATACCGCGCGAATACCCAATAACTACATGAACAATATATA--TATATACACACAACGAAACCCATCGGCCTTTCCTTTCTGTGACGACTGCTAGGAGTTTATACTGGAACATAC-CCTCGCCGTTGGATAATTGATCCTCGA-----------------------------------------------------------------------------------------------TCCG-CTCCACTACAAACAATAATAAAACATTAA
droWil2 scf2_1100000004943:4116867-4116940 + CAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTG-TTGTTTTTTAT------TCAGGACTTGGAAAATGTATTGCGTTCGCATTCAGAAGAGTGGCTTGATAAAAT
droVir3 scaffold_13047:16300190-16300241 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATCTGGAGAACGTGCTGCGCGCTCACTCCGACGAATGGTTGGACAAGAT
droMoj3 scaffold_6540:12628285-12628354 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGGA-ATT-CTCTTTT------ATAGGATCTGGAGAACGTGCTGCGCTCCCATTCCGACGAGTGGCTGGACAAGAT
droGri2 scaffold_15116:1187441-1187492 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATCTGGAAAATGTGCTGCGCGCCCACTCCGACGAATGGTTGGACAAAAT
droAna3 scaffold_13340:15090398-15090466 - AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCC-ATTTTTT------TAAGGATCTGGAAAACGTATTGCGCTCGCACTCTGAGGAATGGCTGGACAAGAT
droBip1 scf7180000395971:96497-96571 + AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAG-TTT----TCTATTTTTGAAAGGATCTGGAAAACGTTTTGCGCTCTCACTCTGAGGAATGGCTGGACAAGAT
droKik1 scf7180000302707:555029-555123 + AAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGATTAATTCTATATAT--TTTATG-ACC-TTTTAAA------TTAGGATCTGGAGAATGTCCTGCGCTCGCACTCTGAGGAATGGCTGGAGAAGAT
droFic1 scf7180000454126:290811-290881 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-TTGTATTTTCT------TCAGGATCTGGAGAATGTTCTGCGCTCGCATTCTGAGGAATGGCTGGAGAAGAT
droEle1 scf7180000490994:1099276-1099335 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCT------TCAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGAGAAGAT
droRho1 scf7180000779431:148050-148120 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-CTGGTTTTCAT------TTAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGAGAAGAT
droBia1 scf7180000302402:1072746-1072798 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGATCTGGAGAACGTGCTACGCTCGCACTCTGAGGAATGGCTGGAGAAGAT
droTak1 scf7180000415710:539833-539901 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAT--CCG-TATTCTC------TTAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGAGAAGAT
droEug1 scf7180000409804:1584559-1584628 + ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-TTG-TTTTCCC------TTAGGATCTGGAGAATGTTCTGCGCTCGCACTCTGAGGAATGGCTGGAGAAGAT
dm3 chr3R:15306683-15306751 + TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-C-CCA-TTTTCCC------TCAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGACAAGAT
droSim2 3r:5959700-5959769 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATT-ACC-TTTTCCC------TCAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGACAAGAT
droSec2 scaffold_25:469623-469692 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATT-ACC-TTTTCCC------TCAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGACAAGAT
droYak3 3R:4042420-4042508 + TAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATGTTAAA------------TATTATTACTG-ATC-TTTTCCC------TTAGGATCTGGAGAATGTTCTGCGCTCGCACTCTGAGGAATGGCTGGACAAGAT
droEre2 scaffold_4770:6334629-6334698 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-ATC-TTTTCCC------TTAGGATCTGGAGAATGTGCTGCGCTCGCACTCGGAGGAATGGCTGGACAAGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ACATACCGCGCGAATACCCAATAACTACATGAACAATATATATATATATACACACAACGAAACCCATCGGCCTTTCCCTTCTGTGACGACTGCTAGGAGTTTATACTGGAACATACACCTCGCCGTTGGATAATTGATCCTCGATCCGCTCCACTACAAACAACTAGTGAATTTTAACAT---------------TTAATC-CTCTATTCCTT------GTAGGATCTGGAGAATGTATTGCGCTCCCACTCTGACGAATGGCTCGAGAAGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................TGGAACATACACCTCGCCGTTGG................................................................................................................................................231932.636200587403002240
..........................................................................................................TGGAACATACACCTCGCCGTTGGA...............................................................................................................................................241916.373110289101011270
..........................................................................................................TGGAACATACACCTCGCCGTTG.................................................................................................................................................221913.00247024221000110
.........................................................................................................CTGGAACATACACCTCGCCGTTGG................................................................................................................................................24185.8310509500003520
.........................................................................................................CTGGAACATACACCTCGCCGTTGGA...............................................................................................................................................25183.285905200001510
..............................................TATACACACAACGAAACCCATCGGCC.........................................................................................................................................................................................................26132.623402820100210
..........................................................................................................TGGAACATACACCTCGCCGTTGGAT..............................................................................................................................................25172.003403110000200
.........................................................................................................CTGGAACATACACCTCGCCGTTG.................................................................................................................................................23182.003603600000000
................................................TACACACAACGAAACCCATCGGCC.........................................................................................................................................................................................................24152.003002720000100
..........................................................................................................TGGAACATACACCTCGCCGTTGGATA.............................................................................................................................................26171.943303100000200
..............................................TATACACACAACGAAACCCATCGGC..........................................................................................................................................................................................................25131.922502310100000
...........................................................................................................GGAACATACACCTCGCCGTTGG................................................................................................................................................22201.903803410000300
..........................................................................................................TGGAACATACACCTCGCCGTTGGATAAT...........................................................................................................................................28171.823102800001110
......................AACTACATGAACAATATATATATAT..................................................................................................................................................................................................................................2551.8090000000810
......................AACTACATGAACAATATATATATA...................................................................................................................................................................................................................................2461.67100100000900
......................AACTACATGAACAATATATATATATA.................................................................................................................................................................................................................................2651.6080100000700
..............................................TATACACACAACGAAACCCATCGG...........................................................................................................................................................................................................24131.542001900000010
..........................................................................................................TGGAACATACACCTCGCCGTT..................................................................................................................................................21191.372602300210000
...........................................................................................................GGAACATACACCTCGCCGTTGGA...............................................................................................................................................23201.352702700000000
.....................TAACTACATGAACAATATATATAG....................................................................................................................................................................................................................................2461.3380000000800
................................................TACACACAACGAAACCCATCGGC..........................................................................................................................................................................................................23161.252001910000000
..........................................................................................................TGGAACATACACCTCGCCGTTGGATAA............................................................................................................................................27171.182001800000200
......................AACTACATGAACAATATATATAG....................................................................................................................................................................................................................................2361.1770100000600
..........................................................................................................TGGAACATACACCTCGCCGT...................................................................................................................................................20191.162202100001000
.....................TAACTACATGAACAATATATATATAT..................................................................................................................................................................................................................................2651.0050100000400
...........................................................................................................GGAACATACACCTCGCCGTTG.................................................................................................................................................21200.951901810000000
......................AACTACATGAACAATATATATATAA..................................................................................................................................................................................................................................2570.8660000000600
......................AACTACATGAACAATATATATA.....................................................................................................................................................................................................................................2260.8350100000400
.........................................................................................................................................TCCTCGATCCGCTCCACTACAAACA...............................................................................................................2590.7870700000000
......................................................................................................................................TGATCCTCGATCCGCTCCACTA.....................................................................................................................2290.7870700000000
...............................................................................TCTGTGACGACTGCTAGGAGTTTAT.........................................................................................................................................................................2540.7530000000300
...............................................................................TCTGTGACGACTGCTAGGAGTTTATA........................................................................................................................................................................2640.7530100000200
................................................TACACACAACGAAACCCATCGGCCT........................................................................................................................................................................................................25150.73110920000000
................................................TACACACAACGAAACCCATCGGCCTT.......................................................................................................................................................................................................26130.6990900000000
..............................................................................................AGGAGTTTATACTGGAACATAC.............................................................................................................................................................2230.6720000000200
.....................TAACTACATGAACAATATATATA.....................................................................................................................................................................................................................................2360.6740000000400
.....................TAACTACATGAACAATATATATATATA.................................................................................................................................................................................................................................2750.6030000000300
............................................TATATACACACAACGAAACCCATC.............................................................................................................................................................................................................2470.5740300000100
......................................................................................................................................TGATCCTCGATCCGCTCCACTACAA..................................................................................................................2590.5650500000000
..............................................TATACACACAACGAAACCCATCG............................................................................................................................................................................................................23130.5470600100000
.....................TAACTACATGAACAATATATATATA...................................................................................................................................................................................................................................2560.5030000000300
..........................................................................TCCCTTCTGTGACGACTGCTAGGAGTT............................................................................................................................................................................2720.5010100000000
.................................................................................TGTGACGACTGCTAGGAGTTTATAC.......................................................................................................................................................................2540.5020000000200
........................................................................TTTCCCTTCTGTGACGACTGCTAGGAG..............................................................................................................................................................................2720.5010100000000
.....................TAACTACATGAACAATATATATAT....................................................................................................................................................................................................................................2460.5030100000200
.......................................................AACGAAACCCATCGGCCTTTCCC...................................................................................................................................................................................................2320.5010100000000
..........................................................................TCCCTTCTGTGACGACTGCTAGGA...............................................................................................................................................................................2420.5010100000000
....................................TATATATATATATACACACAACGAA....................................................................................................................................................................................................................2520.5010100000000
...............................................................................TCTGTGACGACTGCTAGGAGTTTATAC.......................................................................................................................................................................2740.5020200000000
..........................................................................................................TGGAACATACACCTCGCCG....................................................................................................................................................19200.501001000000000
..................................................................................................................................TAATTGATCCTCGATCCGCTCCAC.......................................................................................................................2490.4440110001010
...........................................................................................................GGAACATACACCTCGCCGTTGGATAA............................................................................................................................................26180.4480800000000
............................................TATATACACACAACGAAACCCATCGGC..........................................................................................................................................................................................................2770.4330300000000
..........CGAATACCCAATAACTACATGAACAA.............................................................................................................................................................................................................................................2650.4020000000200
...........................................................................................................GGAACATACACCTCGCCGTTGGAT..............................................................................................................................................24180.3970600000100
.........................................................................................................CTGGAACATACACCTCGCCGTT..................................................................................................................................................22180.3360600000000
.................................................................................................................TACACCTCGCCGTTGGATAATTGATC......................................................................................................................................2690.3330000000300
.......GCGCGAATACCCAATAACTACATGAAC...............................................................................................................................................................................................................................................2760.3320000000200
.........................................................................................................CTGGAACATACACCTCGCCGT...................................................................................................................................................21180.3360600000000
...............................................................................................GGAGTTTATACTGGAACATACACCTC........................................................................................................................................................2630.3310000000010
......................................................................................................................................TGATCCTCGATCCGCTCCACTACA...................................................................................................................2490.3330300000000
..................................................................................................................................TAATTGATCCTCGATCCGCTCCA........................................................................................................................2390.3330300000000
..................................................................................................................................TAATTGATCCTCGATCCGCTCC.........................................................................................................................2290.3330300000000
.............................................................................................TAGGAGTTTATACTGGAACATACACC..........................................................................................................................................................2630.3310010000000
...............................................ATACACACAACGAAACCCATCGG...........................................................................................................................................................................................................23130.3140400000000
..............................................TATACACACAACGAAACCCATCGGCCT........................................................................................................................................................................................................27130.3140310000000
.......................................................................................................TACTGGAACATACACCTCGCCGTTGG................................................................................................................................................2680.2520200000000
.................................................................................TGTGACGACTGCTAGGAG..............................................................................................................................................................................18200.2550300000200
.................................................................................TGTGACGACTGCTAGGAGTTTATACAA.....................................................................................................................................................................2740.2510100000000
..............................................................................TTCTGTGACGACTGCTAGGAGTTTAT.........................................................................................................................................................................2640.2510100000000
.................................................................................TGTGACGACTGCTAGGAGTTTATACTGT....................................................................................................................................................................2840.2510100000000
.........................................................................................................CTGGAACATACACCTCGCCG....................................................................................................................................................20200.2550500000000
................................................TACACACAACGAAACCCATCGG...........................................................................................................................................................................................................22160.2540400000000
................................................TACACACAACGAAACCCATCGGCCTTT......................................................................................................................................................................................................27130.2330200000010
...............................................ATACACACAACGAAACCCATCGGC..........................................................................................................................................................................................................24130.2330300000000
......................................................................................................................................TGATCCTCGATCCGCTCCACTACAAA.................................................................................................................2690.2220200000000
..................................................................................................................................TAATTGATCCTCGATCCGCTC..........................................................................................................................2190.2220200000000
...........................................................................................................GGAACATACACCTCGCCGTTGGATAAT...........................................................................................................................................27180.2240400000000
.................................................................................................................TACACCTCGCCGTTGGATAATTGATCC.....................................................................................................................................2790.2220200000000
..............................................TATACACACAACGAAACCCATCGGCT.........................................................................................................................................................................................................26140.2130210000000
..................................................CACACAACGAAACCCATCGGCCTT.......................................................................................................................................................................................................24140.2130300000000
..........................................................................................................TGGAACATACACCTCGCCGTTA.................................................................................................................................................22190.2140400000000
...............................................................................TCTGTGACGACTGCTAGGA...............................................................................................................................................................................19200.2040200000200
......................AACTACATGAACAATATATATATATAA................................................................................................................................................................................................................................2750.2010000000100
...............................................................................TCTGTGACGACTGCTAGGAG..............................................................................................................................................................................20200.2040400000000
.........................................................................................................CTGGAACATACACCTCGCCGTTGGATA.............................................................................................................................................27160.1930000000210
..........................................................................................................TGGAACATACACCTCGCCGTTGGATAAA...........................................................................................................................................28170.1830300000000
..........CGAATACCCAATAACTACATG..................................................................................................................................................................................................................................................2160.1710100000000
...TACCGCGCGAATACCCAATAACTACAT...................................................................................................................................................................................................................................................2760.1710000000100
......................AACTACATGAACAATATATATAGT...................................................................................................................................................................................................................................2460.1710000000100
......................AACTACATGAACAATATATATAT....................................................................................................................................................................................................................................2360.1710000000100
.....................TAACTACATGAACAATATATATAC....................................................................................................................................................................................................................................2460.1710100000000
...........GAATACCCAATAACTACATGAACA..............................................................................................................................................................................................................................................2460.1710100000000
.............................................ATATACACACAACGAAACCCATCGGCC.........................................................................................................................................................................................................27130.1520200000000
............................................................................................................GAACATACACCTCGCCGTTGGA...............................................................................................................................................22200.1530300000000
............................................................................................................GAACATACACCTCGCCGTTGG................................................................................................................................................21200.1530300000000
......................AACTACATGAACAATATATAT......................................................................................................................................................................................................................................2170.1410100000000
.....................TAACTACATGAACAATATATATATAA..................................................................................................................................................................................................................................2670.1410000000100
............................................TATATACACACAACGAAACCCATCGG...........................................................................................................................................................................................................2670.1410100000000
............................................TATATACACACAACGAAACCCATCGGCC.........................................................................................................................................................................................................2870.1410100000000
......................AACTACATGAACAATATATATATG...................................................................................................................................................................................................................................2470.1410100000000
.....................TAACTACATGAACAATATATATATG...................................................................................................................................................................................................................................2570.1410000000010
.....................TAACTACATGAACAATATATAT......................................................................................................................................................................................................................................2270.1410100000000
........................................................................................................ACTGGAACATACACCTCGCCGTTGG................................................................................................................................................25150.1320200000000
..................................................CACACAACGAAACCCATCGGCCT........................................................................................................................................................................................................23160.1320200000000
.......................................................................................................TACTGGAACATACACCTCGCCG....................................................................................................................................................2280.1310100000000
.......................................................................................................TACTGGAACATACACCTCGCCGTTGGA...............................................................................................................................................2780.1310000000100
................................................TACACACAACGAAACCCATCG............................................................................................................................................................................................................21160.1320200000000
.......................................................................................................TACTGGAACATACACCTCGCCGTTG.................................................................................................................................................2580.1310100000000
................................................TACACACAACGAAACCCATC.............................................................................................................................................................................................................20160.1320110000000
..........................................................................................................TGGAACATACACCTCGCCGTTGGATAATT..........................................................................................................................................29170.1220200000000
..................................................CACACAACGAAACCCATCGGC..........................................................................................................................................................................................................21170.1220200000000
..................................................CACACAACGAAACCCATCGG...........................................................................................................................................................................................................20170.1220200000000
.........................TACATGAACAATATATATATAT..................................................................................................................................................................................................................................2290.1110100000000
..................................................................................................................................TAATTGATCCTCGATCCGCTCCACTA.....................................................................................................................2690.1110100000000
.........................................................................................................................................TCCTCGATCCGCTCCACTACAAAC................................................................................................................2490.1110100000000
............................................................................................................GAACATACACCTCGCCGTTGGATAAT...........................................................................................................................................26180.1120000000200
...............................................................................TCTGTGACGACTGCTAGGAGTTTA..........................................................................................................................................................................24180.1120200000000
...................................................................................................................CACCTCGCCGTTGGATAATTGATCC.....................................................................................................................................2590.1110000000100
.........................................................................................................CTGGAACATACACCTCGCCGTTGA................................................................................................................................................24180.1120200000000
.......................................................................................................................................GATCCTCGATCCGCTCCACTACAAA.................................................................................................................2590.1110100000000
....................................................................................................................................ATTGATCCTCGATCCGCTCCACT......................................................................................................................2390.1110100000000
......................AACTACATGAACAAT............................................................................................................................................................................................................................................1590.1110000000100
.........................................................................................................................................TCCTCGATCCGCTCCACTACAAA.................................................................................................................2390.1110100000000
..............................................................................................................................TGGATAATTGATCCTCGATCCGCTC..........................................................................................................................2590.1110100000000
......................................................................................................................................TGATCCTCGATCCGCTCCACTACAAAC................................................................................................................2790.1110100000000
......................................................................................................................................TGATCCTCGATCCGCTCCACTAC....................................................................................................................2390.1110100000000
......................................................................................................................................TGATCCTCGATCCGCTCCACTACAAACA...............................................................................................................2890.1110100000000
.....................................................................................................................................TTGATCCTCGATCCGCTCCACTACAAAC................................................................................................................2890.1110100000000
...........................................................................................................................................CTCGATCCGCTCCACTACAAACA...............................................................................................................2390.1110100000000
..................................................................................................................................TAATTGATCCTCGATCCGCTA..........................................................................................................................2190.1110100000000
...............................................................................TCTGTGACGACTGCTAGGAGTTT...........................................................................................................................................................................23180.1120200000000
..........................................................................................................TGGAACATACACCTCGCCGTTGGT...............................................................................................................................................24190.1120200000000
................................................................................................................................GATAATTGATCCTCGATCCGC............................................................................................................................21100.1010100000000
.........................................................................................................CTGGAACATACACCTCGCC.....................................................................................................................................................19200.1020200000000
......................................................................................................................CTCGCCGTTGGATAATTGATCCTCGA.................................................................................................................................26100.1010100000000
..............................................................................TTCTGTGACGACTGCTAGGAG..............................................................................................................................................................................21200.1020200000000
...TACCGCGCGAATACCCAATAACT.......................................................................................................................................................................................................................................................23100.1010100000000
...TACCGCGCGAATACCCAATAACTAC.....................................................................................................................................................................................................................................................25100.1010100000000
......................................................................................................................CTCGCCGTTGGATAATTGATCC.....................................................................................................................................22100.1010100000000
...............................................................................TCTGTGACGACTGCTAGGAA..............................................................................................................................................................................20200.1020100000100
.......................................................................................................................TCGCCGTTGGATAATTGATCCTCGA.................................................................................................................................25100.1010100000000
...............................................................................................................................GGATAATTGATCCTCGATC...............................................................................................................................19100.1010100000000
.......................................................................................................TACTGGAACATACACCTCGCCGTTGGAA..............................................................................................................................................28100.1010100000000
......................................................................................................................CTCGCCGTTGGATAATTGATCCTCGATC...............................................................................................................................28100.1010100000000
......................................................................................................................CTCGCCGTTGGATAATTGATCCTCGAT................................................................................................................................27100.1010100000000
...TACCGCGCGAATACCCAAT...........................................................................................................................................................................................................................................................19130.0810000000100
.............................................ATATACACACAACGAAACCCATCGGT..........................................................................................................................................................................................................26130.0810100000000
................................................TACACACAACGAAACCCATCGGCCTTTC.....................................................................................................................................................................................................28130.0810100000000
.............................................ATATACACACAACGAAACCCAT..............................................................................................................................................................................................................22130.0810100000000
................................................TACACACAACGAAACCCATCGGCCTTTCC....................................................................................................................................................................................................29130.0810010000000
..............................................TATACACACAACGAAACCCATC.............................................................................................................................................................................................................22130.0810000100000
.............................................ATATACACACAACGAAACCCATCGGCT.........................................................................................................................................................................................................27140.0710100000000
................................................TACACACAACGAAACCCATCGGCCC........................................................................................................................................................................................................25150.0710010000000
.........................................................................................................CTGGAACATACACCTCGCCGTTGGATAA............................................................................................................................................28160.0610100000000
.........................................................................................................CTGGAACATACACCTCGCCGTTGGAT..............................................................................................................................................26160.0610100000000
.........................................................................................................CTGGAACATACACCTCGCCGTTGGATAAC...........................................................................................................................................29160.0610000001000
..................................................CACACAACGAAACCCATCGGCC.........................................................................................................................................................................................................22160.0610100000000
..........................................................................................................TGGAACATACACCTCGCCGTTGGATT.............................................................................................................................................26170.0610100000000
................................................TACACACAACGAAACCCATCGGCT.........................................................................................................................................................................................................24170.0610010000000
...................................................ACACAACGAAACCCATCGGCCTTT......................................................................................................................................................................................................24170.0610100000000
...................................................ACACAACGAAACCCATCGGCCTT.......................................................................................................................................................................................................23170.0610100000000
...............................................................................TCTGTGACGACTGCTAGGAGTT............................................................................................................................................................................22180.0610100000000
.................................................................................TGTGACGACTGCTAGGAGTTTA..........................................................................................................................................................................22180.0610000000100
...............................................................................TCTGTGACGACTGCTAGGAGTA............................................................................................................................................................................22180.0610100000000
...............................................................................................................CATACACCTCGCCGTTGGATAATTGA........................................................................................................................................26180.0610100000000
..............................................................................TTCTGTGACGACTGCTAGGAGT.............................................................................................................................................................................22180.0610100000000
............................................................................................................GAACATACACCTCGCCGTTGGATAA............................................................................................................................................25180.0610100000000
.................................................................................................................TACACCTCGCCGTTGGATAATTGA........................................................................................................................................24180.0610000000100
.....................................................ACAACGAAACCCATCGGCCTTTCC....................................................................................................................................................................................................24180.0610100000000
.......................................................AACGAAACCCATCGGCCTTTCCA...................................................................................................................................................................................................23180.0610100000000
.........................................................................................................CTGGAACATACACCTCGCCGTTA.................................................................................................................................................23180.0610100000000
.............................................................................................................AACATACACCTCGCCGTTGGAT..............................................................................................................................................22180.0610100000000
...............................................................................TCTGTGACGACTGCTAGGAGT.............................................................................................................................................................................21180.0610100000000
............................................................................................................GAACATACACCTCGCCGTTGGAT..............................................................................................................................................23180.0610100000000
...................................................................................................................CACCTCGCCGTTGGATAATTG.........................................................................................................................................21180.0610100000000
............................................................................................................GAACATACACCTCGCCGTTGGATAATT..........................................................................................................................................27180.0610100000000
..............................................................................................................ACATACACCTCGCCGTTGGATAAT...........................................................................................................................................24180.0610100000000
.................................................................................TGTGACGACTGCTAGGAGTT............................................................................................................................................................................20180.0610100000000
..........................................................................................................TGGAACATACACCTCGCCGTTGT................................................................................................................................................23190.0510100000000
...................................................ACACAACGAAACCCATCGGCCT........................................................................................................................................................................................................22190.0510100000000
..............................................................................TTCTGTGACGACTGCTAGG................................................................................................................................................................................19200.0510100000000
...........................................................................................................GGAACATACACCTCGCCGTTGGATAGAG..........................................................................................................................................28200.0510000000100
...........................................................................................................GGAACATACACCTCGCCGTT..................................................................................................................................................20200.0510100000000
............................................................................................................GAACATACACCTCGCCGTT..................................................................................................................................................19200.0510100000000
..............................................................................................................ACATACACCTCGCCGTTGG................................................................................................................................................19200.0510100000000
..............................................................................TTCTGTGACGACTGCTAGGA...............................................................................................................................................................................20200.0510100000000
.............................................................................................................AACATACACCTCGCCGTTG.................................................................................................................................................19200.0510100000000
...........................................................................................................GGAACATACACCTCGCCGT...................................................................................................................................................19200.0510100000000
......................................................CAACGAAACCCATCGGCC.........................................................................................................................................................................................................18200.0510100000000
....................................................CACAACGAAACCCATCGGC..........................................................................................................................................................................................................19200.0510100000000
..............................................................................................................ACATACACCTCGCCGTTG.................................................................................................................................................18200.0510100000000
...................................................ACACAACGAAACCCATCGGC..........................................................................................................................................................................................................20200.0510100000000
...............................................................................................................CATACACCTCGCCGTTGG................................................................................................................................................18200.0510100000000
...............................................................................TCTGTGACGACTGCTAGGAAA.............................................................................................................................................................................21200.0510100000000
droPer2
ACATACCGCGCGAATACCCAATAACTACATGAACAATATATA--TATATACACACAACGAAACCCATCGGCCTTTCCTTTCTGTGACGACTGCTAGGAGTTTATACTGGAACATAC-CCTCGCCGTTGGATAATTGATCCTCGA-----------------------------------------------------------------------------------------------TCCG-CTCCACTACAAACAATAATAAAACATTAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................TACTGGAACATAC-CCTCGCCGTTGG................................................................................................................................................2511.001010000
..........................................................................TCCTTTCTGTGACGACTGCTAGGAGT.............................................................................................................................................................................26200.306150000
..........................................................................TCCTTTCTGTGACGACTGCTAG.................................................................................................................................................................................22200.255050000
..........................................................................TCCTTTCTGTGACGACTGCTAGG................................................................................................................................................................................23200.204040000
..........................................................................TCCTTTCTGTGACGACTGCTAGGAG..............................................................................................................................................................................25200.204040000
...........................................................................CCTTTCTGTGACGACTGCTAGGAG..............................................................................................................................................................................24200.153030000
......CGCGCGAATACCCAATAACTAC.....................................................................................................................................................................................................................................................22200.153030000
...........................................................................CCTTTCTGTGACGACTGCTA..................................................................................................................................................................................20200.102020000
...........................................................................CCTTTCTGTGACGACTGCTAGG................................................................................................................................................................................22200.102020000
................................................TACACACAACGAAACCCATCG............................................................................................................................................................................................................21200.051010000
..............................................................................................................................TGGATAATTGATCCTCGA-----------------------------------------------------------------------------------------------TCCG-CTCCAC.......................28200.051010000
.................................................ACACACAACGAAACCCATCGG...........................................................................................................................................................................................................21200.051010000
........................................................................................................................CGCCGTTGGATAATTGATCCT....................................................................................................................................21200.051010000
....................................TATATA--TATATACACACAACGAAACCC................................................................................................................................................................................................................27200.051010000
..................................AATATATA--TATATACACACAACGAAACC.................................................................................................................................................................................................................28200.051010000
..........................................................................TCCTTTCTGTGACGACTGCTAGGAGTT............................................................................................................................................................................27200.051010000
............................................................................CTTTCTGTGACGACTGCTAGG................................................................................................................................................................................21200.051010000
..........................................................................TCCTTTCTGTGACGACTGCTA..................................................................................................................................................................................21200.051010000
...............................................................................TCTGTGACGACTGCTAGGAGTTTATA........................................................................................................................................................................26200.051001000
.......GCGCGAATACCCAATAACTACATGAAC...............................................................................................................................................................................................................................................27200.051010000
..................................................................................................................................TAATTGATCCTCGA-----------------------------------------------------------------------------------------------TCCG-CT...........................20200.051010000
...........................................................................CCTTTCTGTGACGACTGCTAGGA...............................................................................................................................................................................23200.051010000
............................................................AACCCATCGGCCTTTCCTTTCTGTGACGA........................................................................................................................................................................................29200.051010000
......CGCGCGAATACCCAATAACTACATGAAC...............................................................................................................................................................................................................................................28200.051010000
droWil2
CAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTG-TTGTTTTTTAT------TCAGGACTTGGAAAATGTATTGCGTTCGCATTCAGAAGAGTGGCTTGATAAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................GTATTGCGTTCGCATTCAGAAGAGTGGC..........2811.00100100
.........................................................................................................................................................................................................................................ATGTATTGCGTTCGCATTCAGAAGAGT.............2711.00100010
........................................................................................................................................................................................................................................................ATTCAGAAGAGTGGCTTGATAAA..2311.00100100
droVir3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATCTGGAGAACGTGCTGCGCGCTCACTCCGACGAATGGTTGGACAAGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................GCTGCGCGCTCACTCCGAC.................1911.001000000000000000000000000000000000000000000000000000000000000001
.....................................................................................................................................................................................................................................GAGAACGTGCTGCGCGCTCACTCC....................2411.001000000000000000000000000000000000000000000000000000000000000001
......................................................................................................................................................................................................................................AGAACGTGCTGCGCGCTCACTCC....................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GAACGTGCTGCGCGCTCACTC.....................2111.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GAACGTGCTGCGCGCTCACTCC....................2211.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TCTGGAGAACGTGCTGCGCGCT..........................2211.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CGTGCTGCGCGCTCACTCCGA..................2111.001000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................ATCTGGAGAACGTGCTGCGCGCT..........................2311.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATGGA-ATT-CTCTTTT------ATAGGATCTGGAGAACGTGCTGCGCTCCCATTCCGACGAGTGGCTGGACAAGATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................GACGAGTGGCTGGACAAGA.1911.001000001
droGri2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATCTGGAAAATGTGCTGCGCGCCCACTCCGACGAATGGTTGGACAAAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCC-ATTTTTT------TAAGGATCTGGAAAACGTATTGCGCTCGCACTCTGAGGAATGGCTGGACAAGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................GTATTGCGCTCGCACTCTGAGGAATG............2611.001010000
.....................................................................................................................................................................................................................................................CGCACTCTGAGGAATGGCTGG.......2111.001010000
............................................................................................................................................................................................................................................TATTGCGCTCGCACTCTGAGGAAT.............2411.001010000
.............................................................................................................................................................................................................................................ATTGCGCTCGCACTCTGAGGAATGGCTG........2811.001000010
...........................................................................................................................................................................................................................................GTATTGCGCTCGCACTCTGAGGAATGGC..........2811.001000010
droBip1
AT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAG-TTT----TCTATTTTTGAAAGGATCTGGAAAACGTTTTGCGCTCTCACTCTGAGGAATGGCTGGACAAGATSizeHit CountTotal NormTotal
No Reads
droKik1
AAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATGATTAATTCTATATAT--TTTATG-ACC-TTTTAAA------TTAGGATCTGGAGAATGTCCTGCGCTCGCACTCTGAGGAATGGCTGGAGAAGATSizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-TTGTATTTTCT------TCAGGATCTGGAGAATGTTCTGCGCTCGCATTCTGAGGAATGGCTGGAGAAGATSizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCT------TCAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGAGAAGATSizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-CTGGTTTTCAT------TTAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGAGAAGATSizeHit CountTotal NormTotal
No Reads
droBia1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGATCTGGAGAACGTGCTACGCTCGCACTCTGAGGAATGGCTGGAGAAGATSizeHit CountTotal NormTotal
No Reads
droTak1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAT--CCG-TATTCTC------TTAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGAGAAGATSizeHit CountTotal NormTotal
No Reads
droEug1
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-TTG-TTTTCCC------TTAGGATCTGGAGAATGTTCTGCGCTCGCACTCTGAGGAATGGCTGGAGAAGATSizeHit CountTotal NormTotal
No Reads
dm3
TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-C-CCA-TTTTCCC------TCAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGACAAGATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................GCGCTCGCACTCTGAGGAATGGCTG........2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTCCC------TCAGGATCTGGT..........................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TCTGCGCTCGCACTCTGAGGAATGGCTG........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CGCTCGCACTCTGAGGAATGGCTGGA......2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GCTCGCACTCTGAGGAATGGC..........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................CGCACTCTGAGGAATGGCTGGA......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................CGCACTCTGAGGAATGGCTGGAC.....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................................................ACGTTCTGCGCTCGCACTCTGAGGAATG............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................TCGCACTCTGAGGAATGGCTGGA......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TTCTGCGCTCGCACTCTGAGG................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................CTCGCACTCTGAGGAATGGCTG........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CTGAGGAATGGCTGGACAAGAT2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GCGCTCGCACTCTGAGGA...............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TCGCACTCTGAGGAATGGCTGG.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GCTCGCACTCTGAGGAATGGCTGGACAA...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................................................................................................................................................................................................................TTCTGCGCTCGCACTCTGAGGAATGGC..........2711.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................ACTCTGAGGAATGGCTGGACATC..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TCTGCGCTCGCACTCTGAGGAATGGC..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GCACTCTGAGGAATGGCTGGAC.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................CTGAGGAATGGCTGGACA....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TCTGCGCTCGCACTCTGAGGAAT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................................................TGGAGAACGTTCTGCGCTCGC.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CTGCGCTCGCACTCTGAGGA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TCTGCGCTCGCACTCTGAGGAATGG...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATT-ACC-TTTTCCC------TCAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGACAAGATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................CTGGAGAACGTTCTGCGCTCGCACT......................2511.00100100000000000000
.....................................................................................................................................................................................................................................................CGCACTCTGAGGAATGGCTGGACAA...2511.00101000000000000000
............................................................................................................................................................................................................................................TTCTGCGCTCGCACTCTGAGGAATGG...........2611.00100000000000010000
.......................................................................................................................................................................................................................................GAACGTTCTGCGCTCGCACTCTGAGGA...............2711.00100010000000000000
.........................................................................................................................................................................................................................................ACGTTCTGCGCTCGCACTC.....................1911.00101000000000000000
......................................................................................................................................................................................................................................................GCACTCTGAGGAATGGCTGG.......2011.00100010000000000000
droSec2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATT-ACC-TTTTCCC------TCAGGATCTGGAGAACGTTCTGCGCTCGCACTCTGAGGAATGGCTGGACAAGATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................CGCACTCTGAGGAATGGC..........1811.0011000
..............................................................................................................................................................................................................................................CTGCGCTCGCACTCTGAGG................1911.0010010
..................................................................................................................................................................................................................................................GCTCGCACTCTGAGGAATGGCTGGA......2511.0010100
..................................................................................................................................................................................................................................................GCTCGCACTCTGAGGAATGGC..........2111.0010001
.....................................................................................................................................................................................................................................................CGCACTCTGAGGAATGGCTGG.......2111.0010100
droYak3
TAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATGTTAAA------------TATTATTACTG-ATC-TTTTCCC------TTAGGATCTGGAGAATGTTCTGCGCTCGCACTCTGAGGAATGGCTGGACAAGATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................GAATGTTCTGCGCTCGCACTCTGA..................2412.00202000000000
...................................................................................................................................................................................................................CC------TTAGGATCTGGAGAATGTTCTGCGCTC...........................2911.00110000000000
...............................................................................................................................................................................................................................................TGCGCTCGCACTCTGAGG................1811.00101000000000
..................................................................................................................................................................................................................................................GCTCGCACTCTGAGGAATGGCT.........2211.00101000000000
.....................................................................................................................................................................................................................................................CGCACTCTGAGGAATGGCTG........2011.00110000000000
droEre2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATG-ATC-TTTTCCC------TTAGGATCTGGAGAATGTGCTGCGCTCGCACTCGGAGGAATGGCTGGACAAGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................ATCTGGAGAATGTGCTGCGCTCG..........................2311.0010000100
.......................................................................................................................................................................................................................................................CACTCGGAGGAATGGCTGGACAAGAT2611.0010100000
...............................................................................................................................................................................................................................GATCTGGAGAATGTGCTGCGCTCG..........................2411.0011000000
..................................................................................................................................................................................................................................CTGGAGAATGTGCTGCGCTC...........................2011.0010100000

Generated: 05/18/2015 at 04:14 AM