ID:

dps_2336

 Coordinate:

Unknown_singleton_2748:25531-25681 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.8 -20.3 -20.3

Flybase annnotation

CDS [Dpse\GA27987-cds]; exon [dpse_GLEANR_7232:2]; intron [Dpse\GA27987-in]

No Repeatable elements found

mature
  1. dps_2336  Unknown_singleton_2748:25546-25565 -
  2. Unknown_singleton_2748:31165-31184 -
star
  1. Unknown_singleton_2748:20697-20714 -
  2. dps_2336  Unknown_singleton_2748:25610-25627 -
  3. Unknown_singleton_2748:31229-31246 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTATGGCATTGACCGAGGTGGACGTCCCTGCAAGGCCGCTGCCTTTCTCCGTGAGTTTGTGCCCTGTGGCCAGTGGATGCAGTGGACGAGTATCTGCGCAGGGGCATGGCCGGCCGCCCGACCCGAACACTGGTGGAGTTTATTGCTCAGACGATTTGCAAGGATACTGCCCCACGTTTGGCCAAGTAATCAATCTCTAACGGGTATCCAATGTTATATATATTTTTTACTGTGTTTTTTGACGATGCCAC
********************************************************************************************************..(((((((.((..............(((.(((((...((((...........))))....))).))))))).)))))))..***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 V112
male body		 M040
female body
 GSM444067
head
 GSM343916
embryo
 M022
male body		 M062
head
.......................................TGCCTATCTCCGGGAGTTGGT............................................................................................................................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................TTACTGTGTTTTTTGACGATG.... 21 0 13 0.69 9 9 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTTACTGTGTTTTTTGACGAT..... 21 0 13 0.62 8 8 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTTTTTACTGTGTTTTTTGAC........ 21 0 13 0.62 8 8 0 0 0 0 0 0
......................................................................................................................................................................CTGCCCCACGTTTGGCCAAG................................................................. 20 0 2 0.50 1 0 0 0 1 0 0 0
........................................................................................................CATGGCCGGCCGCCCGAC................................................................................................................................. 18 0 3 0.33 1 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................TTTTTACTGTGTTTTTTGAC........ 20 0 13 0.31 4 4 0 0 0 0 0 0
................................................................................................................................................................................................................................TTTTACTGTGTTTTTTGACG....... 20 0 13 0.31 4 4 0 0 0 0 0 0
.....................................................................................................................................................................................................................TTATATATATTTTTTACTGTG................. 21 0 4 0.25 1 1 0 0 0 0 0 0
.......................................................TTTGTGCCCTGTGGCCAATGGGTG............................................................................................................................................................................ 24 2 4 0.25 1 0 0 0 1 0 0 0
............................................................................................TCTGCGCAGGGGCATGGCCGG.......................................................................................................................................... 21 0 4 0.25 1 0 0 1 0 0 0 0
.........................................................................................GTATCTGCGCAGGGGCATGG.............................................................................................................................................. 20 0 4 0.25 1 0 1 0 0 0 0 0
...........................................................................................ATCTGCGCAGGGGCATGGCCG........................................................................................................................................... 21 0 4 0.25 1 0 1 0 0 0 0 0
............................................................................................................................................................................CACGTTTGGCCAAGTAATCAA.......................................................... 21 0 13 0.23 3 3 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATTTTTTACTGTGTTTTTTGA......... 21 0 13 0.23 3 3 0 0 0 0 0 0
...................................................................................................................................................................................................................................TACTGTGTTTTTTGACGATG.... 20 0 13 0.23 3 3 0 0 0 0 0 0
...................................................................................................................................................................................................................................TACTGTGTTTTTTGACGATGC... 21 0 13 0.23 3 3 0 0 0 0 0 0
................................................................................GGTGTACGAGTGTCTGCGCAG...................................................................................................................................................... 21 3 6 0.17 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................ACTGTGTTTTTTGACGATGCC.. 21 0 13 0.15 2 2 0 0 0 0 0 0
............................................................................................................................................................................CACGTTTGGCCAAGTAATCAAT......................................................... 22 0 13 0.15 2 2 0 0 0 0 0 0
................................................................................................................................................................................................................................TTTTACTGTGTTCTTTGACG....... 20 1 13 0.15 2 2 0 0 0 0 0 0
.....................................................................................................................CCGACCCGAACACTGGTGGA.................................................................................................................. 20 0 13 0.15 2 2 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTTTTTACTGTGTATTTTGAC........ 21 1 13 0.15 2 2 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTTTTACTGTGTATTTTGACG....... 21 1 13 0.15 2 2 0 0 0 0 0 0
.................................................................................................................................................CTCAGACGATTTGCAAGGAT...................................................................................... 20 0 13 0.15 2 0 2 0 0 0 0 0
..............................................................................................................................................................................................................................TTTTTTACTGTGTTTTTTGA......... 20 0 13 0.15 2 2 0 0 0 0 0 0
........................................................................................................................................AGTTTATTGCTCAGACGATTT.............................................................................................. 21 0 13 0.15 2 2 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTTACTGTGTATTTTGACGAT..... 21 1 13 0.15 2 2 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATTTTTTACTGTGTTTTTTG.......... 20 0 13 0.15 2 2 0 0 0 0 0 0
............................................................................TTGCAGTGGACGCGTATCTGG.......................................................................................................................................................... 21 3 7 0.14 1 0 0 0 1 0 0 0
.............CGAGGTGGACGGCCCTGCAAG......................................................................................................................................................................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0
.................GTGGACGTCCCTGCAAGGC....................................................................................................................................................................................................................... 19 0 9 0.11 1 0 0 1 0 0 0 0
........................................................................................................................................................................................................................TAGAGATTTTTTACTGTGTTAT............. 22 3 10 0.10 1 0 0 0 0 1 0 0
...................................................................................................AGGGGAATGGCCGGCCGCC..................................................................................................................................... 19 1 11 0.09 1 0 1 0 0 0 0 0
.............................................................................................CTGCGCAGGGGAATGGCCG........................................................................................................................................... 19 1 11 0.09 1 0 0 1 0 0 0 0
....................................................................................................................CCCGACCCGAACACTGGTGGA.................................................................................................................. 21 0 12 0.08 1 1 0 0 0 0 0 0
.....................................................................................ACGAGTATCTGCGCAGGGGAA................................................................................................................................................. 21 1 12 0.08 1 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................TTTTTTACCGTGTTTTTTGAC........ 21 1 13 0.08 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTACTGTGTTTTTTGACGATGCCA. 24 0 13 0.08 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTTACTGTGTTTTTTGACG....... 19 0 13 0.08 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................TTTTACTGTGTTCTTTGACGA...... 21 1 13 0.08 1 1 0 0 0 0 0 0
......................................................................................................................CGACCCGAACACTGGTGGAG................................................................................................................. 20 0 13 0.08 1 1 0 0 0 0 0 0
.................................................................................................................................................CTCAGACGATTTGCAAGGATAA.................................................................................... 22 1 13 0.08 1 1 0 0 0 0 0 0
..........................................................................................................................................TTTATTGCTCAGACGATTTG............................................................................................. 20 0 13 0.08 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTTTATACTGTGTTTTTTGAC........ 21 1 13 0.08 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTTTTTACTGTGTTCTTTGAC........ 21 1 13 0.08 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTTACTGTGTTTTTTGACGAA..... 21 1 13 0.08 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................TTTTACTGTGTTTTTTGACGA...... 21 0 13 0.08 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................TTTTTTTACTGTGTTTTTTGA......... 21 1 13 0.08 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................................TATTTTTTACTGTGTTTTTTG.......... 21 0 13 0.08 1 1 0 0 0 0 0 0
..............................................................................................................................................TTGCTCAGACGATTTGCAAGG........................................................................................ 21 0 13 0.08 1 0 1 0 0 0 0 0
............................................................................................................................................................................................................................TATTTTTTACTGTGTTTTTTGACGA...... 25 0 13 0.08 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTACTGTGTTTTTTGACGAT..... 20 0 13 0.08 1 1 0 0 0 0 0 0
.....................................................................................................................CCGACCCGAACACTGGTGGAG................................................................................................................. 21 0 13 0.08 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................................................TTTTTCACTGTGTTTTTTGACGATGC... 26 1 13 0.08 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................TTACTGGGTTTTTTGACGATG.... 21 1 13 0.08 1 1 0 0 0 0 0 0
.................................................................................................................................CTGGTGGAGTTTATTGCTCA...................................................................................................... 20 0 14 0.07 1 0 1 0 0 0 0 0
....................................................................................................................................................AGACGATTTGCAAGGA....................................................................................... 16 0 14 0.07 1 1 0 0 0 0 0 0
......................................................................................................................CGAATCGAACACTGGTGGAG................................................................................................................. 20 2 14 0.07 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................CTGTGTTTTTTGACGATGCC.. 20 0 14 0.07 1 0 0 0 0 0 1 0
..................................................................................................................................................................................TGGCCAAGTAATCAATCTC...................................................... 19 0 15 0.07 1 0 0 0 0 0 0 1
......AATTGACCGGCGTGGACGT.................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0 0 0
.................................................................TTTGCCAGCGGATGCAGTGG...................................................................................................................................................................... 20 3 20 0.05 1 0 1 0 0 0 0 0

Anti-sense strand reads

GATACCGTAACTGGCTCCACCTGCAGGGACGTTCCGGCGACGGAAAGAGGCACTCAAACACGGGACACCGGTCACCTACGTCACCTGCTCATAGACGCGTCCCCGTACCGGCCGGCGGGCTGGGCTTGTGACCACCTCAAATAACGAGTCTGCTAAACGTTCCTATGACGGGGTGCAAACCGGTTCATTAGTTAGAGATTGCCCATAGGTTACAATATATATAAAAAATGACACAAAAAACTGCTACGGTG
*****************************************************************..(((((((.((..............(((.(((((...((((...........))))....))).))))))).)))))))..******************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 V112
male body		 M040
female body
 SRR902012
CNS imaginal disc
 M022
male body		 GSM343916
embryo
.........................................................................................................................................................................................CATTAGTTAGAGATTGCCCAT............................................. 21 0 3 2.00 6 6 0 0 0 0 0
.........................................................................................................................................................................................CATTAGTTAGAGATTGCCCATA............................................ 22 0 3 1.00 3 3 0 0 0 0 0
....................................GCGACGGAAAGAGGCACTCA................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................CGGTTCATTAGTTAGAGATT................................................... 20 0 13 0.77 10 9 1 0 0 0 0
................................................GGCACTCAAACACGGGACA........................................................................................................................................................................................ 19 0 3 0.67 2 2 0 0 0 0 0
.................................................GCACTCAAACACGGGACACC...................................................................................................................................................................................... 20 0 3 0.33 1 0 1 0 0 0 0
..........................................................................................................................................................................................ATTAGTTAGAGATTGCCCAT............................................. 20 0 3 0.33 1 1 0 0 0 0 0
..............................................GAGGCACTCAAACACGGGACA........................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0
.............................................................................................................................................................................................AGTTAGAGATTGCCCATAGG.......................................... 20 0 3 0.33 1 1 0 0 0 0 0
........................................................................................................................................................................................................CCCCATAGGTTACAATATAT............................... 20 1 3 0.33 1 0 1 0 0 0 0
......................................................................................................................................................................................................TTGCCCATAGGTTACAATATAT............................... 22 0 3 0.33 1 0 1 0 0 0 0
............................................................................................................CGGCCGGCGGGCTGGGCTTG........................................................................................................................... 20 0 10 0.30 3 1 2 0 0 0 0
.....................................................................................................................................................................................................................................GACACAAAAAACTGCTACGGT. 21 0 14 0.29 4 4 0 0 0 0 0
....................................................................................................................................................................................................................CAATATATATAAAAAATGACA.................. 21 0 4 0.25 1 1 0 0 0 0 0
...................................................................................................................................................................................CCGGTTCATTAGTTAGAGATT................................................... 21 0 13 0.23 3 3 0 0 0 0 0
.................................................................................................................................................GAGTCTGCTAAACGTTCCTAT..................................................................................... 21 0 13 0.23 3 3 0 0 0 0 0
...............................................................................................................................................................................................................GGTTACAATATATATAAAAAA....................... 21 0 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................................AGTCTGCTAAACGTTCCTATG.................................................................................... 21 0 13 0.15 2 2 0 0 0 0 0
.....................................................................................................................................................................................GGTTCATTAGTTAGAGATTGC................................................. 21 0 13 0.15 2 2 0 0 0 0 0
.....................................................................................................................................................................................GGTTCATTAGTTAGAGATTG.................................................. 20 0 13 0.15 2 2 0 0 0 0 0
..................................................................................................................................................AGTCTGCTAAACGTTCCTAT..................................................................................... 20 0 13 0.15 2 2 0 0 0 0 0
................................................................................................................................................CGAGGCTGCCAAACATTC......................................................................................... 18 3 20 0.15 3 0 0 0 3 0 0
.....................................................................................................................................ACCTCAAATAACGAGTCTGC.................................................................................................. 20 0 14 0.14 2 2 0 0 0 0 0
.................................................................................................................................................................................AACCGGTTCATTAGTTAGAGA..................................................... 21 0 15 0.13 2 2 0 0 0 0 0
...................................................................................................................................................................................CCGGTTCATTAGTTAGAGAT.................................................... 20 0 15 0.13 2 2 0 0 0 0 0
..........................................................................................................................................AAATAAAGAGTCGGATAAACGT........................................................................................... 22 3 20 0.10 2 0 0 2 0 0 0
................................................................................................................CGGCGGGCTGGGCTTGTGAC....................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0
.............................................................................................................GGCCGGCGGGCTGGGCTTGT.......................................................................................................................... 20 0 11 0.09 1 1 0 0 0 0 0
.................................................................................................................GGCGGGCTGGGCTTGTGA........................................................................................................................ 18 0 11 0.09 1 1 0 0 0 0 0
..................................................................................................................GCGGGCTGGGCTTGTGACC...................................................................................................................... 19 0 12 0.08 1 1 0 0 0 0 0
....................................................................................................................GGGCTGGGCTTGTGACCAA.................................................................................................................... 19 1 12 0.08 1 0 1 0 0 0 0
.............................................................................................................................................TAACGAGTCTGCTAAACGTTC......................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0
......................................................................................................................................................................................GTTCATTAGTTAGGGATTG.................................................. 19 1 13 0.08 1 0 1 0 0 0 0
..........................................................................................................................................AAATAACGAGTCTGCTAAAC............................................................................................. 20 0 13 0.08 1 1 0 0 0 0 0
...........................................................................................................................................AATAACGAGTCTGCTAAACGT........................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0
............................................................................................................................................TTAACGAGTCTGCTAAACGTTC......................................................................................... 22 1 13 0.08 1 1 0 0 0 0 0
................................................................................................................................................CGAGTCTGCTAAACGTTCCT....................................................................................... 20 0 13 0.08 1 1 0 0 0 0 0
..........................................................................................................................................AAATAACGAGTCTGCTAAACG............................................................................................ 21 0 13 0.08 1 1 0 0 0 0 0
....................................................................................................................................................................................CCGTTCTTTAGTTTGAGATTGC................................................. 22 3 13 0.08 1 0 0 0 0 0 1
.......................................................................................................................................................................................TTCATTAGTTAGAGATTGCC................................................ 20 0 13 0.08 1 1 0 0 0 0 0
......................................................................................................................GCTGGGCTTGTGACCACCTCA................................................................................................................ 21 0 13 0.08 1 0 1 0 0 0 0
...............................................................................................................................................ACGAGTCTGCTAAACGTTCC........................................................................................ 20 0 13 0.08 1 0 0 0 0 1 0
.................................................................................................................................CACCACCTCAAATAACGAGTC..................................................................................................... 21 1 14 0.07 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................................CACAAAAAACTGCTACGGTG 20 0 14 0.07 1 1 0 0 0 0 0
................................................................................................................................................................................TTACCGGTTCATTAGTTAGAGAT.................................................... 23 2 15 0.07 1 1 0 0 0 0 0
....................................................................................................................................................................................CGGTTCATTAGTTAGAGAT.................................................... 19 0 15 0.07 1 1 0 0 0 0 0
.................................................................................................................................................................................TTCCGGTTCATTAGTTAGAGAT.................................................... 22 2 15 0.07 1 1 0 0 0 0 0
...................................................................................................................................................................................CCGGTTCATTAGTTAGAGA..................................................... 19 0 15 0.07 1 1 0 0 0 0 0
...................................................................................................TCCACGTAGCGGCCGGGGG..................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0
..................................................................................................GTGCCCGTACAGTCCGGCG...................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_singleton_2748:25481-25731 - dps_2336 CTATGGCATTGACCGAGGTGGACGT------CCCTGCAAGGCCGCTGCCTTTCTCCGTGAGTTTGTGCCCTGTGGCCAGTGGATGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGACGAGTATCTGCGCAGGGGCATGGCCGGCCGCCCGACCCGAACACTGGTGGAGTTTATTGCTCAGACGATTTGCAAGGATACTGCCCCACGTTTGGCCAAGTAATCAA----TCTCT-AACGGGTATCCAATGTTATATATATTTTTTAC-T-GTGTTTTT-TGACGATGCCAC-----------------------------------------------------------------
droPer2 scaffold_377:10236-10581 + CTATGGCATTGACCGAGGTGGACGT------CCCTGCAAGGCCGCTGCCTTTCTCCGTGAGTTTGTGCCCTGTGGCCAGTGGATGCATATTGTGAGTATTGTGGGGCGCTTTGTTG------GGGCGCAGATCTTA------------------------TG----G-----------------------------ATT---TTCTCCCTCAAAGGATGCCACAAATGTTATGGTGACAAAGGGCTTCGAATACGAGTATCTGCGCAAGGGAATGGCCGGCCGCCCGACCCGAACACTGGTGGAGTTTATTGCTCAGACGATTTGCAAGGATACGGCCCCACGTTTGGCCAAGTAATCAA----TCTCT-AACGGGAATCCAATGTTATATATATTTTTTAC-T-GTGTTTTT-TGACGATGCCAC-----------------------------------------------------------------
droWil2 scf2_1100000004513:825030-825242 + CCTCTGCAATCAGGGGCGTGGGCCCGCCTCTGCTTGCTTGGCTGCTGCCATTTTGCATACGATGGTACCCTGCTCGGACTGGGTACATTTGGATAC----------------------------------------------------------------------------------------------------------------------CAATGGCACTGGCATGTTGGCAAAGCACAATGTTCGACCGTATCTTTTGAAGGATGCCATGACCGGACGTCCGACCCGTACAATTATACAATTTCTCGCCCAAATGGCCTGCAAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13049:6264101-6264380 + CTACGGCATTGGACGTGGAGGCCGT------CCCTGCAAGGCAGCTGCCTTCCTCCGTGAATTTGTGCCATGCGGCCAGTGGATGCATATTGTAAGTAAATCTAACGCTG-T-----GACTAG-AATTCTTGCTAA----------------------------------------------------------ATTGTGC---CT--TCTTTAGGATGCCACCAATGTGATGGTAACAAACGGCTTGGACTTCGAATACTTGCGACGTGGCATGGCCGGTCGTCCTACCAGAACCCTGATTGAGTTCATCGCTCAAACCATTTGCAAGGATACTGCACCAAAGATGGGAAAATAA---------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6680:4581102-4581393 + TTATGGTATTGGGCGTGGTGGCCGT------CCCTGTAAAGCCGCTGCTTTCCTGAGGGAGTTTGTGCCTTGTGGTCAATGGATGCACATTGTAAGTAAT-------------------------------------------------------------CTGTATATTTATATATGTATGTTTATAGCTTACCATGTGCCTTTATCTATCTAGGATGCTTCCAATGTTATGGTAACAGTAGGTGATGAGTACGAGTATTTGAGAAGAGGCATGGCTGGTCGTCCAACTCGCACGTTAATAGAATTTATTGCTCAGACTATTTGCAAGGATACTGCTCCAAAGATGGGCAAGTAAG------CA------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15072:75784-76082 + CTACGGTATTGCTCGTGGTGGACGT------CCTTGCAAGGCAGCTGCCTTCCTCCGCGAATTTGTGCCGTGTGGCCAATGGATGCACATTGTAAGTTCATTCAAAGCAT-T-----GACTGACGACTTTTATTAA------------------------TA----------------------------------CA-----TTTTGAATTTAGGATGCCACCAATGTTATGGTAACCAATGGAGTTGACTTCGAATATCTCAGGCGTGGAATGGCTGGACGTCCTACCAGAACCCTCATTGAATTCATTGCGCAGACCATTTGCAAGGACACTGCGCCAAAAATGGGAAAATAAA------ATTT-G-------TATGCAATGTTA-------------------------------------------------------------------------------------------------------
droAna3 scaffold_13337:8020683-8021082 - CTACGGTATTGGCCGTGGCGGACGT------CCCTGCAAAGCTGCCGCTTTTCTGCGCGAATTTGTGCCCTGCGGACAATGGATGCATATTGTAAGTGTCAATATCGTTT---------------------TTTGTTTTGGGTAATCTTCTTAAGTTTCC----AACT-----------------------------------CTTTATCCGTAGGACGCTACCAACGTAATGATAACTCGCGGCGACGAGTTTGAATATCTGCGACAGGGAATGGCTGGCCGCCCCACGCGAACCCTCATCGAGTTTATTGCGCAGACCATTTGCAAGGATACGGCACCCAAGCTTAACAAGTGATGATTATCCTTGAAAATGG-------------------TGTTT---TACGTTATATTGAGACGATGCCAC---TTGTACATCAGTGTTATTTTATCCTACTGACCGAGCCTACGTAACCTCTTTGATGAGTTGAT
droBip1 scf7180000396541:181392-181603 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATATCTGCGACAGGGTATGGCTGGCCGCCCCACGCGAACCCTCATCGAGTTTATTGCGCAGACCATTTGCAAGGATACGGCACCCAAGCTTAACAAGTGATGACTATCCTTGAAAATGG-------------------TGTTT---TACGTTATATTGAGACGATGCCAC---TTGTACATCAGTGTTATTTTATCCTACTGACCGAACCTACGTAGCTTCTTCGATGAGTTGAT
droKik1 scf7180000302474:365770-366129 - CTACGGCATTGGACGCGGAGGACGT------CCCTGCAAGGCCGCTGCTTTCCTCCGAGAGTTCGTGCCCTGCGGCCAGTGGATGCATATAGTAAGATCAGTTTCTCGGTATTTTC------AGTACTTAATATAA------------------------TGGGGACA--------------------------CTTTCGC--CTTCTTGTGCAGGATGCCACCAATGTGATGATCACTCGGGGAGACGAGTTCGAGTATTTGCGCAAGGGCATGGCTGGACGACCCACGCGGACTCTAATAGAGTTCATTGCGCAGACCATTTGCAAGGATACAGCTCCCAAGATGGGCAAGTGATGAT---CCTTGA-CATGG-------------------CGTTC---TA-A--------TGACGATACCAC---ACGTACAGTGTTGTTTTACTG-ACTATTGACTA----------------------------C
droFic1 scf7180000453833:796262-796582 + CTACGGCATCGGCCGTGGAGGTCGT------CCCTGCAAGGCCGCCGCCTTCCTGCGGGAATTCGTGCCCTGCGGTCAATGGATGCATATTGTAAGTTCCAGTTTCATAAATA--AG-----GTATTCGAAAAAGT------------------------AA----------------------------------CA----CGGTTCTTCCCAGGACGCCACGAATGTGATGATCACCCGTGGCGACGAGTTCGAGTATCTGCGACAGGGCATGGCAGGTCGGCCAACGAGGACACTCATCGAATTCATAGCGCAATCGATTTGCAAGGATACGGCTCCCAAGATCAACAAGTGAT------CGTTCC-AACGG-------------------TGTTT---TACAGTTTATC-AGACGATGCCAC-----------------------------------------------------------------
droEle1 scf7180000491268:68059-68382 - CTACGGCATCGGTCGCGGAGGTCGT------CCTTGCAAGGCAGCCGCCTTCCTGCGGGAATTCGTGCCCTGCGGTCAGTGGATGCATATTGTAAGTGCAGATTTTGTAAGCCATT------TGTCTTGCATTTAT------------------------TG----------------------------------ATA---ATTTTCCTCTCAGGACGCCACCAATGTGATGATCACGCGCGGCGACGAGTTCGAGTATCTACGACAGGGCATGGCTGGACGGCCAACGAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGATACGGCTCCCAAGCTCAACAAATGAT------CCTTCG-AACGG-------------------TGTTT-ACTT-GTTTTTTC-AGACGATGCCAC-----------------------------------------------------------------
droRho1 scf7180000779204:260376-260699 + CTACGGCATTGGCCGTGGAGGTCGT------CCTTGCAAGGCCGCCGCTTTCCTGCGGGAATTCGTACCTTGCGGACAGTGGATGCATATTGTGAGTTAAGAAATAGTAAGCCATT------AGGCTTGAATTTAA------------------------TG----------------------------------ATA---ATTTTTCCCGCAGGACGCCACTAATGTGATGATCACTCGCGGCGACGAGTTCGAGTATCTGCGACAGGGCATGGCCGGACGGCCCACAAGGACACTCATCGAGTTTATTGCGCAGTCTATATGCAAGGATACGGCTCCCAAGCTAAACAAGTGAT------CCTTCG-AACGG-------------------TGTTT-ACTA-GTTTTATC-TGACGATGCCAC-----------------------------------------------------------------
droBia1 scf7180000302428:10551710-10552092 + CTACGGCATTGGCCGTGGAGGACGC------CCTTGCAAGGCCGCCGCCTTCCTGCGTGAATTCGTTCCGTGCGGCCAGTGGATGCATATTGTAAGTGCCGTCCTTGCATTCCCTA------GGTCGTTGATTTGA------------------------TC----------------------------------CGG---TTTCTCCTTCCAGGACGCCACCAATGTGATGATCACCCGCGGCGATGAGTTCGAGTATCTGCGACAGGGCATGGCCGGACGGCCCACAAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGACACGGCTCCCAAGCTAAACAAGTGAT------ACTTTG-AGCGG-------------------TGTTT---TA-GTTTTATC-AGACGATGCCACCACACGTTCATCGACATTCTTTTA-ACGACTGACCAA-CCTATG--ACTTCTTTAACGTTCTGAC
droTak1 scf7180000414445:92791-92966 - C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTATCTGCGACAGGGGATGGCCGGGCGGCCAACGAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGATACGGCGCCCAAGCTAAACAAGTGAT------ACGTGG-AACGG-------------------TGTTT-TTGT-GTTTTATC-AGACGATGCCAC---ACGTTCATCGGTGTTCTTTTA-ACGACTGACCA-----------------------------
droEug1 scf7180000409524:46588-46956 - CTACGGCATTGGCCGTGGTGGACGT------CCTTGCAAGGCAGCCGCCTTCCTGCGTGAGTTCGTACCTTGCGGTCAGTGGATGCATATTGTAAGTTCAGCTCATTTTAAAACCC------AGACCTTTTTTAAA------------------------TG----------------------------------TGG---TTCTTCTTTCCAGGATGCTACTAATGTGATGATCACTCGGGGCGATGAGTTTGAATATCTGCGAGAGGGCATGGCCGGACGGCCAACTAGGACACTCATAGAGTTTATTGCACAGTCCATATGCAAAGATACTGCCCCTAAGCTAAACAAGTGAG------GACTTC-AACGG-------------------TGTTT---TA-ATTTTATC-AGACGATGCCAC---ACGTT-----------TTTGA-ACGGCTGACCAA-CCTATG--ACTATTTTAACGTTATGAC
dm3 chr3L:8614732-8615052 + CTACGGTATCGGTCGTGGTGGACGT------CCTTGCAAAGCTGCCGCTTTCCTTCGTGAATTTGTGCCTTGCGGCCAATGGATGCATATTGTAAGTTTTGTTTTTATTAGTTGTA------GGACTTTGATTTGA------------------------TT----------------------------------TG----TGATTTAATCCAGGATGCCACCAACGTGATGATCACACGTGGTGATGAGTTCGAGTATCTGCGAGAGGGCATGGCCGGACGTCCAACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGAA------CCTTCG-AACGG-------------------TGTTT---AA-GTTTAATG-AGACGATGCCAC-----------------------------------------------------------------
droSim2 3l:8404162-8404482 + dsi_9193 CTACGGCATCGGTCGTGGTGGTCGT------CCTTGCAAAGCTGCCGCCTTCCTTCGTGAATTCGTGCCCTGTGGCCAATGGATGCATATCGTAAGTTTTGTTCTTATTAATAGTA------GGACTTTGATTTGA------------------------TT----------------------------------TG----TTATTTAATCTAGGATGCCACCAACGTGATGATCACACGTGGTGATGAGTTCGAGTATCTGCGAGAGGGCATGGCTGGACGTCCGACAAGGACACTCATCGAGTTCATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGAT------CCTTCG-AACGG-------------------TGTTT---TA-GTTTTATC-AGACGATGCCAC-----------------------------------------------------------------
droSec2 scaffold_0:893457-893777 + CTACGGCATCGGTCGTGGTGGTCGT------CCTTGCAAAGCTGCCGCCTTCCTTCGTGAATTTGTCCCTTGTGGCCAATGGATGCATATTGTAAGTTTCGTTCTTATTAATAGTA------GGACTTTAATTTGA------------------------TT----------------------------------TG----TGATTTAATCCAGGATGCCACCAACGTGATGATCACACGTGGTGATGAGTTCGAGTATCTGCGAGAGGGCATGGCAGGACGTCCGACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGAT------CCTTCG-AACGG-------------------TGTTT---TA-GTTTTATC-AGACGATGCCAC-----------------------------------------------------------------
droYak3 3L:3297508-3297887 - CTACGGCATTGGCCGTGGTGGTCGT------CCTTGCAAAGCCGCCGCTTTCCTGCGTGAATTCGTGCCTTGTGGTCAATGGATGCATATTGTAAGTTGTGATTTTATTAATTGTA------ACACTTTGATTTGA------------------------TG----------------------------------CAA---CTATTCCTTTCAGGACGCCACCAACGTGATGATCACACGTGGCGATGAGTTCGAGTATCTGCGTCAGGGCATGGCCGGACGACCTACAAGGACACTCATCGAGTTTATTGCACAGTCCATTTGCAAGGACACAGCTCCAAAACTTAACAAGTGAT------CCTGCG-AACGG-------------------TGTTT---TA-GTTTTATC-AGACGATGCCAC---ACGTTCATCGGTATTCTTTTA-ACGACTGACCAA-CCTATG--ACTTCTTTAACGTTCTGAC
droEre2 scaffold_4784:5431369-5431690 - CTACGGCATTGGTCGTGGTGGTCGT------CCTTGCAAAGCTGCCGCCTTCCTGCGTGAATTCGTGCCTTGTGGCCAATGGATGCATATTGTAAGTTCCGTTCTGGTTAATCGTA------GGACTTTGATTTGA------------------------TG----------------------------------TAA---CTATTCCATCCAGGACGCCACCAACGTGATGATCACACGTGGCGATGAGTTCGAGTATCTGCGCCAGGGCATGGCCGGACGACCTACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAACTTAACAAGTGAT------CCTTCG-AACAG-------------------TGTTT---TA-GGTTTATT-AGACGATGCCAC-----------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CTATGGCATTGACCGAGGTGGACGT------CCCTGCAAGGCCGCTGCCTTTCTCCGTGAGTTTGTGCCCTGTGGCCAGTGGATGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGACGAGTATCTGCGCAGGGGCATGGCCGGCCGCCCGACCCGAACACTGGTGGAGTTTATTGCTCAGACGATTTGCAAGGATACTGCCCCACGTTTGGCCAAGTAATCAA----TCTCT-AACGGGTATCCAATGTTATATATATTTTTTAC-T-GTGTTTTT-TGACGATGCCAC-----------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................TTAC-T-GTGTTTTT-TGACGATG.....................................................................21130.6990000000090
.............................................................................................................................................................................................................................................................................................................................................................................................................TTTAC-T-GTGTTTTT-TGACGAT......................................................................21130.6280000000080
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTAC-T-GTGTTTTT-TGAC.........................................................................21130.6280000000080
.............................................................................................................................................................................................................................................................................................................................................CTGCCCCACGTTTGGCCAAG..........................................................................................................................................2020.5010000010000
...............................................................................................................................................................................................................................................................................CATGGCCGGCCGCCCGAC..........................................................................................................................................................................................................1830.3310100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAC-T-GTGTTTTT-TGAC.........................................................................20130.3140000000040
............................................................................................................................................................................................................................................................................................................................................................................................................TTTTAC-T-GTGTTTTT-TGACG........................................................................20130.3140000000040
.................................................................................................................................................................................................................................................................................................................................................................................................TTATATATATTTTTTAC-T-GTG...................................................................................2140.2510000000010
...................................................................................................................................................................................................................................................................TCTGCGCAGGGGCATGGCCGG...................................................................................................................................................................................................................2140.2510100000000
................................................................................................................................................................................................................................................................GTATCTGCGCAGGGGCATGG.......................................................................................................................................................................................................................2040.2510000001000
..................................................................................................................................................................................................................................................................ATCTGCGCAGGGGCATGGCCG....................................................................................................................................................................................................................2140.2510000001000
...................................................................................................................................................................................................................................................................................................................................................CACGTTTGGCCAAGTAATCAA----...............................................................................................................................21130.2330000000030
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTAC-T-GTGTTTTT-TGA..........................................................................21130.2330000000030
...............................................................................................................................................................................................................................................................................................................................................................................................................TAC-T-GTGTTTTT-TGACGATG.....................................................................20130.2330000000030
...............................................................................................................................................................................................................................................................................................................................................................................................................TAC-T-GTGTTTTT-TGACGATGC....................................................................21130.2330000000030
................................................................................................................................................................................................................................................................................................................................................................................................................AC-T-GTGTTTTT-TGACGATGCC...................................................................21130.1520000000020
...................................................................................................................................................................................................................................................................................................................................................CACGTTTGGCCAAGTAATCAA----T..............................................................................................................................22130.1520000000020
............................................................................................................................................................................................................................................................................................CCGACCCGAACACTGGTGGA...........................................................................................................................................................................................20130.1520000000020
........................................................................................................................................................................................................................................................................................................................CTCAGACGATTTGCAAGGAT...............................................................................................................................................................20130.1520000002000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTAC-T-GTGTTTTT-TGA..........................................................................20130.1520000000020
...............................................................................................................................................................................................................................................................................................................AGTTTATTGCTCAGACGATTT.......................................................................................................................................................................21130.1520000000020
.........................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTTAC-T-GTGTTTTT-TG...........................................................................20130.1520000000020
.................GTGGACGT------CCCTGCAAGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110100000000
...........................................................................................................................................................................................................................................................................................CCCGACCCGAACACTGGTGGA...........................................................................................................................................................................................21120.0810000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................TTAC-T-GTGTTTTT-TGACGATGCCA..................................................................24130.0810000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................TTTAC-T-GTGTTTTT-TGACG........................................................................19130.0810000000010
.............................................................................................................................................................................................................................................................................................CGACCCGAACACTGGTGGAG..........................................................................................................................................................................................20130.0810000000010
........................................................................................................................................................................................................................................................................................................................CTCAGACGATTTGCAAGGATAA.............................................................................................................................................................22130.0810000000010
.................................................................................................................................................................................................................................................................................................................TTTATTGCTCAGACGATTTG......................................................................................................................................................................20130.0810000000010
.............................................................................................................................................................................................................................................................................................................................................................................................................TTTAC-T-GTGTTTTT-TGACGAA......................................................................21130.0810000000010
............................................................................................................................................................................................................................................................................................................................................................................................................TTTTAC-T-GTGTTTTT-TGACGA.......................................................................21130.0810000000010
........................................................................................................................................................................................................................................................................................................................................................................................................TATTTTTTAC-T-GTGTTTTT-TG...........................................................................21130.0810000000010
.....................................................................................................................................................................................................................................................................................................................TTGCTCAGACGATTTGCAAGG.................................................................................................................................................................21130.0810000001000
........................................................................................................................................................................................................................................................................................................................................................................................................TATTTTTTAC-T-GTGTTTTT-TGACGA.......................................................................25130.0810000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................TTAC-T-GTGTTTTT-TGACGAT......................................................................20130.0810000000010
............................................................................................................................................................................................................................................................................................CCGACCCGAACACTGGTGGAG..........................................................................................................................................................................................21130.0810000000010
........................................................................................................................................................................................................................................................................................................CTGGTGGAGTTTATTGCTCA...............................................................................................................................................................................20140.0710000001000
...........................................................................................................................................................................................................................................................................................................................AGACGATTTGCAAGGA................................................................................................................................................................16140.0710000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................C-T-GTGTTTTT-TGACGATGCC...................................................................20140.0711000000000
.........................................................................................................................................................................................................................................................................................................................................................TGGCCAAGTAATCAA----TCTC...........................................................................................................................19150.0710001000000
droPer2
CTATGGCATTGACCGAGGTGGACGT------CCCTGCAAGGCCGCTGCCTTTCTCCGTGAGTTTGTGCCCTGTGGCCAGTGGATGCATATTGTGAGTATTGTGGGGCGCTTTGTTG------GGGCGCAGATCTTA------------------------TG----G-----------------------------ATT---TTCTCCCTCAAAGGATGCCACAAATGTTATGGTGACAAAGGGCTTCGAATACGAGTATCTGCGCAAGGGAATGGCCGGCCGCCCGACCCGAACACTGGTGGAGTTTATTGCTCAGACGATTTGCAAGGATACGGCCCCACGTTTGGCCAAGTAATCAA----TCTCT-AACGGGAATCCAATGTTATATATATTTTTTAC-T-GTGTTTTT-TGACGATGCCAC-----------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................CTCAGACGATTTGCAAGGATA..............................................................................................................................................................21170.82140000014
........................................................................................................................................................................................................................................................................................................................CTCAGACGATTTGCAAGGAT...............................................................................................................................................................20170.295000005
.....................................................................................................................................................................................................................................................................................................ACACTGGTGGAGTTTATTGCT.................................................................................................................................................................................21200.204000004
.............................................................................................................................................................................................................................................................................................................................ACGATTTGCAAGGATACGGCC.........................................................................................................................................................21200.204000004
...........................................................................................................................................................................................................................................................................................................................AGACGATTTGCAAGGATACGG...........................................................................................................................................................21170.183000003
.......................................................................................................................................................................................................................................................................................................................GCTCAGACGATTTGCAAGG.................................................................................................................................................................19170.183000003
................................................................................................................................................................................................................................................................GTATCTGCGCAAGGGAATGGC......................................................................................................................................................................................................................21200.153000003
.......................................................................................................................................................................................................................................................................................................................GCTCAGACGATTTGCAAGGAT...............................................................................................................................................................21170.122010001
................................................................................................................................................................................................................................................................GTATCTGCGCAAGGGAATGG.......................................................................................................................................................................................................................20200.102000002
.............................................................................................................................................................................................................................................................................................................................ACGATTTGCAAGGATACGG...........................................................................................................................................................19200.102000002
............................................................................................................................................................................................................................................................................................................................GACGATTTGCAAGGATACG............................................................................................................................................................19200.102000002
...............................................................................................................................................................................................................................................................................................................................................................................CT-AACGGGAATCCAATGTT........................................................................................................19200.102000002
...............................................................................................................................................................................................................................................................AGTATCTGCGCAAGGGAATGG.......................................................................................................................................................................................................................21200.102000002
...................................................................................................................................................................................................................................................................................................GAACACTGGTGGAGTTTATTG...................................................................................................................................................................................21200.102000002
.............................................................................................................................................................................................................................................................................................................................ACGATTTGCAAGGATACGGC..........................................................................................................................................................20200.102000002
....................................................................................................................................................................................................................................TTATGGTGACAAAGGGCTTCG..................................................................................................................................................................................................................................................21200.102000002
............................................................................................................................................................................................................................................................................................................................GACGATTTGCAAGGATACGG...........................................................................................................................................................20200.102000002
..................................................................................................................................................................................................................................................................................................................................TTGCAAGGATACGGCCCCAC.....................................................................................................................................................20200.102000002
............................................................................................................................................................................................................................................................................................................................GACGATTTGCAAGGATACGGCC.........................................................................................................................................................22200.102000002
........................................................................................................................................................................................................................................................................................................CTGGTGGAGTTTATTGCTCA...............................................................................................................................................................................20160.061000001
..........................................................................................................................................................................................................................................................................................................................CAGACGATTTGCAAGGATACG............................................................................................................................................................21170.061000001
................................................................................................................................................................................................................................................................................................................GTTTATTGCTCAGACGATT........................................................................................................................................................................19170.061000001
.............CGAGGTGGACGT------CCCTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.061000001
........................................................................................................................................................................................................................................................................................................................CTCAGACGATTTGCAAGGATT..............................................................................................................................................................21170.061000001
.................................................................................................................................................................................................................................................................................................................TTTATTGCTCAGACGATTTGC.....................................................................................................................................................................21170.061000001
...........................................................................................................................................................................................................................................................................................................................AGACGATTTGCAAGGATACG............................................................................................................................................................20170.061000001
.....................................................................................................................................................................................................................................................................................................................TTGCTCAGACGATTTGCAAGG.................................................................................................................................................................21170.061000001
..........................................................................................................................................................................................................................................................................................................................CAGACGATTTGCAAGGATTA.............................................................................................................................................................20170.061000001
........................................................................................................................................................................................................................................................................................................................CTCAGACGATTTGCAAGGATAA.............................................................................................................................................................22170.061000001
.......................................................................................................................................................................................................................................................................................................................GCTCAGACGATTTGCAAGGA................................................................................................................................................................20170.061000001
........................................................................................................................................................................................................................................................................................................................CTCAGACGATTTGCAAGGA................................................................................................................................................................19170.061000001
......................................................................................................................................................................................................................................................................GCGCAAGGGAATGGCCGGC..................................................................................................................................................................................................................19190.051000001
........TTGACCGAGGTGGACGT------CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19190.051000001
.................................................................................................................................................................................................................................................................................................................................TTTGCAAGGATACGGCCCCA......................................................................................................................................................20200.051000001
.............................................................................................GAGTATTGTGGGGCGCTTT...........................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
............................................................................................................................................................................................................................................................................................................................GACGATTTGCAAGGATACGGC..........................................................................................................................................................21200.051000001
....................................................................................................................................................................................................................................................................................................AACACTGGTGGAGTTTATTGC..................................................................................................................................................................................21200.051000001
.....................................................................................................................................................................................................................................................................................................ACACTGGTGGAGTTTATTG...................................................................................................................................................................................19200.051000001
....................................................................................................................................................................................................................................................CTTCGAATACGAGTATCTGCG..................................................................................................................................................................................................................................21200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................................................TTTAC-T-GTGTTTTT-TGACG........................................................................19200.051000001
..............................................................................................................................................................................................................................................................GAGTATCTGCGCAAGGGAATG........................................................................................................................................................................................................................21200.051000001
...............................................................................................................................................................................................................................AAATGTTATGGTGACAAAGGG.......................................................................................................................................................................................................................................................21200.051000001
...............................................................................................................................................................................................................................................................................................ACCCGAACACTGGTGGAGTT........................................................................................................................................................................................20200.051000001
.............................................................................................................................................................................................................................................................................................CGACCCGAACACTGGTGGAGT.........................................................................................................................................................................................21200.051000001
............................................................................................................................................................................................................................................................................................CCGACCCGAACACTGGTGGAG..........................................................................................................................................................................................21200.051010000
.....................................................................................................................................................................................................................................................................................................................................CAAGGATACGGCCCCACGTTTT................................................................................................................................................22200.051000001
.........................................................................................................................................................................................................................................GTGACAAAGGGCTTCGAATAC.............................................................................................................................................................................................................................................21200.051000001
....................................................................................................................................................................................................................................TTATGGTGACAAAGGGCTTC...................................................................................................................................................................................................................................................20200.051000001
..............................................................................................................................................................................................................................................................................................................................CGATTTGCAAGGATACGGCC.........................................................................................................................................................20200.051000001
............................................................................................................................................................................................................................................................................................CCGACCCGAACACTGGTGG............................................................................................................................................................................................19200.051000001
.................................................................................................................................................................................................................................................................................................CCGAACACTGGTGGAGTTTA......................................................................................................................................................................................20200.051000001
...............................................................................................................................................................................................................................AAATGTTATGGTGACAAAGG........................................................................................................................................................................................................................................................20200.051000001
........................................................................................................................................................................................................................................................................GCAAGGGAATGGCCGGCCGCC..............................................................................................................................................................................................................21200.051000001
................................................................................................................................................................................................................................AATGTTATGGTGACAAAGGG.......................................................................................................................................................................................................................................................20200.051000001
droWil2
CCTCTGCAATCAGGGGCGTGGGCCCGCCTCTGCTTGCTTGGCTGCTGCCATTTTGCATACGATGGTACCCTGCTCGGACTGGGTACATTTGGATAC----------------------------------------------------------------------------------------------------------------------CAATGGCACTGGCATGTTGGCAAAGCACAATGTTCGACCGTATCTTTTGAAGGATGCCATGACCGGACGTCCGACCCGTACAATTATACAATTTCTCGCCCAAATGGCCTGCAAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CTACGGCATTGGACGTGGAGGCCGT------CCCTGCAAGGCAGCTGCCTTCCTCCGTGAATTTGTGCCATGCGGCCAGTGGATGCATATTGTAAGTAAATCTAACGCTG-T-----GACTAG-AATTCTTGCTAA----------------------------------------------------------ATTGTGC---CT--TCTTTAGGATGCCACCAATGTGATGGTAACAAACGGCTTGGACTTCGAATACTTGCGACGTGGCATGGCCGGTCGTCCTACCAGAACCCTGATTGAGTTCATCGCTCAAACCATTTGCAAGGATACTGCACCAAAGATGGGAAAATAA---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................ACAAACGGCTTGGACTTCG............................................................................................................................................................................................................................................1913.003000000000000000000002000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................AACAAACGGCTTGGACTTCG............................................................................................................................................................................................................................................2013.003000000000100000000000000000001010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................ACGTGGCATGGCCGGTCGTC..............................................................................................................................................................................................................2013.003000000000000000000003000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TTGCGACGTGGCATGGCC.....................................................................................................................................................................................................................1813.003002000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TGCGACGTGGCATGGCCGT...................................................................................................................................................................................................................1913.003000000000200000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CGAATACTTGCGACGTGGC...........................................................................................................................................................................................................................1912.002000000000100000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TTGCGACGTGGCATGGCCG....................................................................................................................................................................................................................1912.002000000020000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................ACTTGCGACGTGGCATGGCCGGT..................................................................................................................................................................................................................2312.002000000000200000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................ATACTTGCGACGTGGCATGGCCGGTCGT...............................................................................................................................................................................................................2812.002000000000200000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TACTTGCGACGTGGCATGGCCGGTCGT...............................................................................................................................................................................................................2712.002000000000100000000000000000001000000000000000000000000000000000
...........GACGTGGAGGCCGT------CCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000200000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GTAACAAACGGCTTGGACTT..............................................................................................................................................................................................................................................2012.002000000000000000000000000000002000000000000000000000000000000000
........TTGGACGTGGAGGCCGT------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000010000000000000000000010000000000000000000000000000000000
....................................................CTCCGTGAATTTGTGCCATGCGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000002000000000000000000000000000000000
...............................................................................................................................................................................................................................................................AATACTTGCGACGTGGCAT.........................................................................................................................................................................................................................1912.002000000000000000000000000000002000000000000000000000000000000000
.....................................................................ATGCGGCCAGTGGATGCA....................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000000100000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................CACCAATGTGATGGTAACAAACGGCT.....................................................................................................................................................................................................................................................2612.002000000000000000000000000000011000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TACTTGCGACGTGGCATGGCCG....................................................................................................................................................................................................................2212.002000000000200000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GTGGCATGGCCGGTCGTCCTACC.........................................................................................................................................................................................................2311.001000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................GTTCATCGCTCAAACCATTTGCAA...................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AACCCTGATTGAGTTCATCGCT.................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................GTAACAAACGGCTTGGACTTCG............................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................ACCCTGATTGAGTTCATCGCT.................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TTGCGACGTGGCATGGCCGGTCG................................................................................................................................................................................................................2311.001000000010000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GATACTGCACCAAAGATGGGAAAATA........................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................CTCAAACCATTTGCAAGGATAC.............................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................ATACTTGCGACGTGGCATGG.......................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ATGGCCGGTCGTCCTACCA........................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GAACCCTGATTGAGTTCATA....................................................................................................................................................................................2011.001000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................................................................................TGATGGTAACAAACGGCTTGGACTTCG............................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ACTGCACCAAAGATGGGAAAATA........................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................................AAACGGCTTGGACTTCGAATA........................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AAGGATACTGCACCAAAGATG................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................GGTAACAAACGGCTTGGACTTCG............................................................................................................................................................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ATTTGCAAGGATACTGCACCAAA....................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
........................................................GTGAATTTGTGCCATGCGGCCAGTG..........................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................ACGTGGCATGGCCGGTCGTCCTAC..........................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTGGACTTCGAATACTTGCGACGT..............................................................................................................................................................................................................................2411.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GTGGCATGGCCGGTCGTCCTACCAGA......................................................................................................................................................................................................2611.001000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................GATGGTAACAAACGGCTTGGAC................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CGTCCTACCAGAACCCTGA...............................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCCTGATTGAGTTCATCGCTC................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................AACAAACGGCTTGGACTTCGA...........................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CGGTCGTCCTACCAGAACCC..................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................CACCAATGTGATGGTAACAAACG........................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................CGGCTTGGACTTCGAATACTTGC...................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CGAATACTTGCGACGTGGCATGGCCGGT..................................................................................................................................................................................................................2811.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GTGGCATGGCCGGTCGTCCTAC..........................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
.................................................................TGCCATGCGGCCAGTGGATGCATA..................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................AACAAACGGCTTGGACTTC.............................................................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AGGATACTGCACCAAAGATGGGAAAA..........................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................CACCAATGTGATGGTAACAAACGGCTTG...................................................................................................................................................................................................................................................2811.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................AAGGATACTGCACCAAAGAT.................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.......ATTGGACGTGGAGGCCGT------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................TAACAAACGGCTTGGACTTCGAAT.........................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000100000000000000000000000
..............................................................................................................................................................................................................................................................GAATACTTGCGACGTGGCATGGCCGGT..................................................................................................................................................................................................................2711.001000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GGTAACAAACGGCTTGGACTT..............................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................ACGTGGCATGGCCGGTCG................................................................................................................................................................................................................1811.001000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GGTAACAAACGGCTTGGACT...............................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TTTGCAAGGATACTGCACCAAAGATGG...............................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................GACTTCGAATACTTGCGACGTGGC...........................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CTTGCGACGTGGCATGGCCGGT..................................................................................................................................................................................................................2211.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................TACTGCACCAAAGATGGGAAAA..........................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
...CGGCATTGGACGTGGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CAAGGATACTGCACCAAA....................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................ACCAATGTGATGGTAACAAACGGCTTG...................................................................................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ATGGCCGGTCGTCCTACCAG.......................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................ACGTGGCATGGCCGGTCGTCCTACCA........................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TGATGGTAACAAACGGCTTG...................................................................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GCATGGCCGGTCGTCCTACCA........................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................ATTGAGTTCATCGCTCAG..............................................................................................................................................................................1811.001000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................................................................................................................................ACTTGCGACGTGGCATGGCCGGTCGTC..............................................................................................................................................................................................................2711.001000000000100000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CGGTCGTCCTACCAGAACC...................................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CTTCGAATACTTGCGACGTG.............................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGGTAACAAACGGCTTGGACTTCG............................................................................................................................................................................................................................................2411.001000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................................................TAACAAACGGCTTGGACTTCGAATAC.......................................................................................................................................................................................................................................2611.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................ACAAACGGCTTGGACTTCGA...........................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GGACTTCGAATACTTGCGACGTGG............................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................CGAATACTTGCGACGTGGCATG........................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AACCATTTGCAAGGATACTGCAC........................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TGCAAGGATACTGCACCAAA....................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTGCAAGGATACTGCACCA......................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
....GGCATTGGACGTGGAGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TGCAAGGATACTGCACCAAAG...................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCTTGGACTTCGAATACTTGCGAC................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................ACAAACGGCTTGGACTTCGAATACT......................................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TGCGACGTGGCATGGCCGGTCGTCC.............................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GATACTGCACCAAAGATGGGAAA...........................................................................................................................................2311.001000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................ATACTTGCGACGTGGCATGGC......................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................ACCAGAACCCTGATTGAGT.........................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................ATACTTGCGACGTGGCATGGCC.....................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
....................................................CTCCGTGAATTTGTGCCATGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
......................................................CCGTGAATTTGTGCCATGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CTTCGAATACTTGCGACGTGGC...........................................................................................................................................................................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................ATACTTGCGACGTGGCATGGCCGGTCGTC..............................................................................................................................................................................................................2911.001000000000100000000000000000000000000000000000000000000000000000
.....GCATTGGACGTGGAGGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001000000000000000000000000000000000000000000000000000000000
........TTGGACGTGGAGGCCGT------CCCTGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
...................................................................CCATGCGGCCAGTGGATGCATA..................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TTCGAATACTTGCGACGTGGCAT.........................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................................GACGTGGCATGGCCGGTCGTCCTACC.........................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................AACAAACGGCTTGGACTTCGAA..........................................................................................................................................................................................................................................2211.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GAACCCTGATTGAGTTCATCGCT.................................................................................................................................................................................2311.001000000000000000000000000000000100000000000000000000000000000000
..................................................................GCCATGCGGCCAGTGGATGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................GGTAACAAACGGCTTGGACTTCGA...........................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................GGCCGGTCGTCCTACCAGAA.....................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................ATGGCCGGTCGTCCTACC.........................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................GTGGCATGGCCGGTCGTCCTACCA........................................................................................................................................................................................................2411.001000000000100000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................AACGGCTTGGACTTCGAATACT......................................................................................................................................................................................................................................2211.001000000000000000000000000000000100000000000000000000000000000000
.............................................................................................................................................................................................................................................CAAACGGCTTGGACTTCGA...........................................................................................................................................................................................................................................1911.001000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................TTGGACTTCGAATACTTGC...................................................................................................................................................................................................................................1911.001000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ATTTGCAAGGATACTGCACC.......................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................GCTCAAACCATTTGCAAG..................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
......................CGT------CCCTGCAAGGCAGCTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501100000000000000000000000000000000000000000000000000000000000000
.......................................................CGTGAATTTGTGCCATGCGG................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501000000000000000000000000000001000000000000000000000000000000000
...................GGCCGT------CCCTGCAAGGCAGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000001000000000000000000000000000000000
.......................................................CGTGAATTTGTGCCATGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000000000000000000001000000000000000000000000000000000000000000
........................................................GTGAATTTGTGCCATGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2020.501000000000000000000000000000001000000000000000000000000000000000
.......................................................CGTGAATTTGTGCCATGCGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000001000000000000000000000000000000000
droMoj3
TTATGGTATTGGGCGTGGTGGCCGT------CCCTGTAAAGCCGCTGCTTTCCTGAGGGAGTTTGTGCCTTGTGGTCAATGGATGCACATTGTAAGTAAT-------------------------------------------------------------CTGTATATTTATATATGTATGTTTATAGCTTACCATGTGCCTTTATCTATCTAGGATGCTTCCAATGTTATGGTAACAGTAGGTGATGAGTACGAGTATTTGAGAAGAGGCATGGCTGGTCGTCCAACTCGCACGTTAATAGAATTTATTGCTCAGACTATTTGCAAGGATACTGCTCCAAAGATGGGCAAGTAAG------CA------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CTACGGTATTGCTCGTGGTGGACGT------CCTTGCAAGGCAGCTGCCTTCCTCCGCGAATTTGTGCCGTGTGGCCAATGGATGCACATTGTAAGTTCATTCAAAGCAT-T-----GACTGACGACTTTTATTAA------------------------TA----------------------------------CA-----TTTTGAATTTAGGATGCCACCAATGTTATGGTAACCAATGGAGTTGACTTCGAATATCTCAGGCGTGGAATGGCTGGACGTCCTACCAGAACCCTCATTGAATTCATTGCGCAGACCATTTGCAAGGACACTGCGCCAAAAATGGGAAAATAAA------ATTT-G-------TATGCAATGTTA-------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CTACGGTATTGGCCGTGGCGGACGT------CCCTGCAAAGCTGCCGCTTTTCTGCGCGAATTTGTGCCCTGCGGACAATGGATGCATATTGTAAGTGTCAATATCGTTT---------------------TTTGTTTTGGGTAATCTTCTTAAGTTTCC----AACT-----------------------------------CTTTATCCGTAGGACGCTACCAACGTAATGATAACTCGCGGCGACGAGTTTGAATATCTGCGACAGGGAATGGCTGGCCGCCCCACGCGAACCCTCATCGAGTTTATTGCGCAGACCATTTGCAAGGATACGGCACCCAAGCTTAACAAGTGATGATTATCCTTGAAAATGG-------------------TGTTT---TACGTTATATTGAGACGATGCCAC---TTGTACATCAGTGTTATTTTATCCTACTGACCGAGCCTACGTAACCTCTTTGATGAGTTGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATATCTGCGACAGGGTATGGCTGGCCGCCCCACGCGAACCCTCATCGAGTTTATTGCGCAGACCATTTGCAAGGATACGGCACCCAAGCTTAACAAGTGATGACTATCCTTGAAAATGG-------------------TGTTT---TACGTTATATTGAGACGATGCCAC---TTGTACATCAGTGTTATTTTATCCTACTGACCGAACCTACGTAGCTTCTTCGATGAGTTGATSizeHit CountTotal NormTotal
No Reads
droKik1
CTACGGCATTGGACGCGGAGGACGT------CCCTGCAAGGCCGCTGCTTTCCTCCGAGAGTTCGTGCCCTGCGGCCAGTGGATGCATATAGTAAGATCAGTTTCTCGGTATTTTC------AGTACTTAATATAA------------------------TGGGGACA--------------------------CTTTCGC--CTTCTTGTGCAGGATGCCACCAATGTGATGATCACTCGGGGAGACGAGTTCGAGTATTTGCGCAAGGGCATGGCTGGACGACCCACGCGGACTCTAATAGAGTTCATTGCGCAGACCATTTGCAAGGATACAGCTCCCAAGATGGGCAAGTGATGAT---CCTTGA-CATGG-------------------CGTTC---TA-A--------TGACGATACCAC---ACGTACAGTGTTGTTTTACTG-ACTATTGACTA----------------------------CSizeHit CountTotal NormTotal
No Reads
droFic1
CTACGGCATCGGCCGTGGAGGTCGT------CCCTGCAAGGCCGCCGCCTTCCTGCGGGAATTCGTGCCCTGCGGTCAATGGATGCATATTGTAAGTTCCAGTTTCATAAATA--AG-----GTATTCGAAAAAGT------------------------AA----------------------------------CA----CGGTTCTTCCCAGGACGCCACGAATGTGATGATCACCCGTGGCGACGAGTTCGAGTATCTGCGACAGGGCATGGCAGGTCGGCCAACGAGGACACTCATCGAATTCATAGCGCAATCGATTTGCAAGGATACGGCTCCCAAGATCAACAAGTGAT------CGTTCC-AACGG-------------------TGTTT---TACAGTTTATC-AGACGATGCCAC-----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CTACGGCATCGGTCGCGGAGGTCGT------CCTTGCAAGGCAGCCGCCTTCCTGCGGGAATTCGTGCCCTGCGGTCAGTGGATGCATATTGTAAGTGCAGATTTTGTAAGCCATT------TGTCTTGCATTTAT------------------------TG----------------------------------ATA---ATTTTCCTCTCAGGACGCCACCAATGTGATGATCACGCGCGGCGACGAGTTCGAGTATCTACGACAGGGCATGGCTGGACGGCCAACGAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGATACGGCTCCCAAGCTCAACAAATGAT------CCTTCG-AACGG-------------------TGTTT-ACTT-GTTTTTTC-AGACGATGCCAC-----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CTACGGCATTGGCCGTGGAGGTCGT------CCTTGCAAGGCCGCCGCTTTCCTGCGGGAATTCGTACCTTGCGGACAGTGGATGCATATTGTGAGTTAAGAAATAGTAAGCCATT------AGGCTTGAATTTAA------------------------TG----------------------------------ATA---ATTTTTCCCGCAGGACGCCACTAATGTGATGATCACTCGCGGCGACGAGTTCGAGTATCTGCGACAGGGCATGGCCGGACGGCCCACAAGGACACTCATCGAGTTTATTGCGCAGTCTATATGCAAGGATACGGCTCCCAAGCTAAACAAGTGAT------CCTTCG-AACGG-------------------TGTTT-ACTA-GTTTTATC-TGACGATGCCAC-----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CTACGGCATTGGCCGTGGAGGACGC------CCTTGCAAGGCCGCCGCCTTCCTGCGTGAATTCGTTCCGTGCGGCCAGTGGATGCATATTGTAAGTGCCGTCCTTGCATTCCCTA------GGTCGTTGATTTGA------------------------TC----------------------------------CGG---TTTCTCCTTCCAGGACGCCACCAATGTGATGATCACCCGCGGCGATGAGTTCGAGTATCTGCGACAGGGCATGGCCGGACGGCCCACAAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGACACGGCTCCCAAGCTAAACAAGTGAT------ACTTTG-AGCGG-------------------TGTTT---TA-GTTTTATC-AGACGATGCCACCACACGTTCATCGACATTCTTTTA-ACGACTGACCAA-CCTATG--ACTTCTTTAACGTTCTGACSizeHit CountTotal NormTotal
No Reads
droTak1
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTATCTGCGACAGGGGATGGCCGGGCGGCCAACGAGGACACTCATCGAGTTTATTGCGCAGTCCATATGCAAGGATACGGCGCCCAAGCTAAACAAGTGAT------ACGTGG-AACGG-------------------TGTTT-TTGT-GTTTTATC-AGACGATGCCAC---ACGTTCATCGGTGTTCTTTTA-ACGACTGACCA-----------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTACGGCATTGGCCGTGGTGGACGT------CCTTGCAAGGCAGCCGCCTTCCTGCGTGAGTTCGTACCTTGCGGTCAGTGGATGCATATTGTAAGTTCAGCTCATTTTAAAACCC------AGACCTTTTTTAAA------------------------TG----------------------------------TGG---TTCTTCTTTCCAGGATGCTACTAATGTGATGATCACTCGGGGCGATGAGTTTGAATATCTGCGAGAGGGCATGGCCGGACGGCCAACTAGGACACTCATAGAGTTTATTGCACAGTCCATATGCAAAGATACTGCCCCTAAGCTAAACAAGTGAG------GACTTC-AACGG-------------------TGTTT---TA-ATTTTATC-AGACGATGCCAC---ACGTT-----------TTTGA-ACGGCTGACCAA-CCTATG--ACTATTTTAACGTTATGACSizeHit CountTotal NormTotal
No Reads
dm3
CTACGGTATCGGTCGTGGTGGACGT------CCTTGCAAAGCTGCCGCTTTCCTTCGTGAATTTGTGCCTTGCGGCCAATGGATGCATATTGTAAGTTTTGTTTTTATTAGTTGTA------GGACTTTGATTTGA------------------------TT----------------------------------TG----TGATTTAATCCAGGATGCCACCAACGTGATGATCACACGTGGTGATGAGTTCGAGTATCTGCGAGAGGGCATGGCCGGACGTCCAACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGAA------CCTTCG-AACGG-------------------TGTTT---AA-GTTTAATG-AGACGATGCCAC-----------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................GCGAGAGGGCATGGCCGGAC.................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GGTCGTGGTGGACGT------CCTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................TAACAAGTGAA------CCTTCG-AACGG-------------------TGTT.............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CTACGGTATCGGTCGTGGTGGACGT------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GAGAGGGCATGGCCGGACGTCCAA...........................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................................................................................CACTCATCGAGTTTATTGCACAGTCC...........................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GAGAGGGCATGGCCGGACGT...............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................................................................................................................................CGTGATGATCACACGTGGTGATGAGT...............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................AA------CCTTCG-AACGG-------------------TGTTT---AA-......................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................CGAGTTTATTGCACAGTCCAT.........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GTCGTGGTGGACGT------CCTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CGTGGTGGACGT------CCTTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................TTCGAGTATCTGCGAGAGGGC...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ACTCATCGAGTTTATTGCACA...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GGTGGACGT------CCTTGCAAAGCTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................TGATGAGTTCGAGTATCTGCGAGAG..............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............CGTGGTGGACGT------CCTTGCAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GATGAGTTCGAGTATCTGCGAGAGGG............................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CGTGGTGGACGT------CCTTGCAAAGCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................GGTGATGAGTTCGAGTATCTGCGAGAG..............................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GTGGTGATGAGTTCGAGTA........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....GTATCGGTCGTGGTGGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GGTCGTGGTGGACGT------CCTTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TATTAGTTGTA------GGACTTTGA........................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CACACGTGGTGATGAGTTCGAGTA........................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TATCTGCGAGAGGGCATGGCCG....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAGCTGCCGCTTTCCTTCGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TGCAAGGACACAGCTCCAAAGC..................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGTGCCTTGCGGCCAATGGATGCATATTGA..............................................................................................................................................................................................................................................................................................................................................................................................................3020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TTCCTTCGTGAATTTGTGCCTTGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................................................TGCCTTGCGGCCAATGGATG......................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................CTTGCGGCCAATGGATG......................................................................................................................................................................................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................GCCTTGCGGCCAATGGATGCATAT.................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTTGTGCCTTGCGGCCAATGGATGCA....................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTATCGGTCGTGGTGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CTACGGCATCGGTCGTGGTGGTCGT------CCTTGCAAAGCTGCCGCCTTCCTTCGTGAATTCGTGCCCTGTGGCCAATGGATGCATATCGTAAGTTTTGTTCTTATTAATAGTA------GGACTTTGATTTGA------------------------TT----------------------------------TG----TTATTTAATCTAGGATGCCACCAACGTGATGATCACACGTGGTGATGAGTTCGAGTATCTGCGAGAGGGCATGGCTGGACGTCCGACAAGGACACTCATCGAGTTCATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGAT------CCTTCG-AACGG-------------------TGTTT---TA-GTTTTATC-AGACGATGCCAC-----------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................GA------------------------TT----------------------------------TG----TTATTTAATCTAG....................................................................................................................................................................................................................................................................................1911.00100001000000000000
...........................................................................................................................................................................................................................................CACACGTGGTGATGAGTTC.............................................................................................................................................................................................................................................1911.00100001000000000000
..............................................................................................................................................................................................................................................................................................................................................................AAGTGAT------CCTTCG-AACGG-------------------TG...............................................................................................2011.00100001000000000000
...............................................................................................................TAGTA------GGACTTTGCC.......................................................................................................................................................................................................................................................................................................................................................................15200.05100000010000000000
droSec2
CTACGGCATCGGTCGTGGTGGTCGT------CCTTGCAAAGCTGCCGCCTTCCTTCGTGAATTTGTCCCTTGTGGCCAATGGATGCATATTGTAAGTTTCGTTCTTATTAATAGTA------GGACTTTAATTTGA------------------------TT----------------------------------TG----TGATTTAATCCAGGATGCCACCAACGTGATGATCACACGTGGTGATGAGTTCGAGTATCTGCGAGAGGGCATGGCAGGACGTCCGACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAGCTTAACAAGTGAT------CCTTCG-AACGG-------------------TGTTT---TA-GTTTTATC-AGACGATGCCAC-----------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CTACGGCATTGGCCGTGGTGGTCGT------CCTTGCAAAGCCGCCGCTTTCCTGCGTGAATTCGTGCCTTGTGGTCAATGGATGCATATTGTAAGTTGTGATTTTATTAATTGTA------ACACTTTGATTTGA------------------------TG----------------------------------CAA---CTATTCCTTTCAGGACGCCACCAACGTGATGATCACACGTGGCGATGAGTTCGAGTATCTGCGTCAGGGCATGGCCGGACGACCTACAAGGACACTCATCGAGTTTATTGCACAGTCCATTTGCAAGGACACAGCTCCAAAACTTAACAAGTGAT------CCTGCG-AACGG-------------------TGTTT---TA-GTTTTATC-AGACGATGCCAC---ACGTTCATCGGTATTCTTTTA-ACGACTGACCAA-CCTATG--ACTTCTTTAACGTTCTGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................CGTGATGATCACACGTGGCGATG..................................................................................................................................................................................................................................................2311.00100000010000
............................................................................................................................................................................................................................................................................................................................................................ACAAGTGAT------CCTGCG-AACGG-------------------TGT..............................................................................................2311.00100000010000
.....................................................................................................................................................................................................................................GATGATCACACGTGGCGATGA.................................................................................................................................................................................................................................................2111.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................AACAAGTGAT------CCTGCG-AACGG-------------------T................................................................................................2211.00100000010000
droEre2
CTACGGCATTGGTCGTGGTGGTCGT------CCTTGCAAAGCTGCCGCCTTCCTGCGTGAATTCGTGCCTTGTGGCCAATGGATGCATATTGTAAGTTCCGTTCTGGTTAATCGTA------GGACTTTGATTTGA------------------------TG----------------------------------TAA---CTATTCCATCCAGGACGCCACCAACGTGATGATCACACGTGGCGATGAGTTCGAGTATCTGCGCCAGGGCATGGCCGGACGACCTACAAGGACACTCATCGAGTTTATTGCACAGTCCATATGCAAGGACACAGCTCCAAAACTTAACAAGTGAT------CCTTCG-AACAG-------------------TGTTT---TA-GGTTTATT-AGACGATGCCAC-----------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............GTGGTGGTCGT------CCTTGCAAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010000100

Generated: 05/18/2015 at 04:12 AM