ID:

dps_2305

 Coordinate:

Unknown_singleton_2007:625-775 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.9 -6.8 -6.8

Flybase annnotation

CDS [Dpse\GA28696-cds]; exon [dpse_GLEANR_8800:3]; intron [Dpse\GA28696-in]

No Repeatable elements found

mature
  1. dps_2305  Unknown_singleton_2007:669-693 -
  2. Unknown_singleton_2007:2776-2800 -
  3. 2:30753410-30753434 -
  4. 2:30762040-30762064 -
  5. Unknown_group_166:16706-16730 +
  6. Unknown_group_305:5286-5310 +
  7. Unknown_singleton_1686:566-590 -
  8. Unknown_singleton_2006:339-363 +
star
  1. dps_2305  Unknown_singleton_2007:746-770 -
  2. Unknown_singleton_2007:2853-2877 -
  3. 2:30753487-30753511 -
  4. 2:30762117-30762141 -
  5. Unknown_group_166:16629-16653 +
  6. Unknown_group_305:5209-5233 +
  7. Unknown_singleton_1686:643-667 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TACAGCTTCTTTAATTTCAGCTACATCAAGGTAGACTTTTCGTTTGGTCTTACGATCACACATCCTGTAGACCCAAGCGACAGCACGCATTAGCCTTGTAAATGAAGATAACCTTTCCAGCAACTCCCTGAATACGATATTGACAGATCCATCTGAAGACATCTCATTTATTGATAACGTAAACTTGCATCTTACTTCCAGTTCCGAGTCAACAACGTCTGAAGTTCCTAGATTCCATAGACTTGCGTCCT
*******************************************************.....................(((......))).((((..((((....((((.....))))...))))....))))............((((....))))..********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 SRR902010
ovaries
 M059
embryo
 V112
male body		 M062
head
 GSM444067
head
 GSM343916
embryo
....................................................................................................................................TACGATATTGACAGATCCATCTGAA.............................................................................................. 25 0 8 2.25 18 5 5 8 0 0 0 0 0
....................................................................................................................................TACGATATTGACAGATCCATCTGAAG............................................................................................. 26 0 8 1.63 13 9 4 0 0 0 0 0 0
.......................................................TCACACATCCTGTAGACCCAAGCGA........................................................................................................................................................................... 25 0 7 1.29 9 2 0 7 0 0 0 0 0
................................................................................................................................TGAATACGATATTGACAGATCCATC.................................................................................................. 25 0 8 1.13 9 7 0 0 1 0 1 0 0
....................................................................................................................................TACGATATTGACAGATCCATCTGAAGA............................................................................................ 27 0 8 1.00 8 6 2 0 0 0 0 0 0
...............................TAGACTTTTCGTTTGGTCTTACGATC.................................................................................................................................................................................................. 26 0 5 1.00 5 3 2 0 0 0 0 0 0
..................................................TACGATCACACATCCTGTAGACC.................................................................................................................................................................................. 23 0 7 0.86 6 5 0 1 0 0 0 0 0
..........................CAAGGTAGACTTTTCGTTTGGTCT......................................................................................................................................................................................................... 24 0 6 0.83 5 5 0 0 0 0 0 0 0
.....................TACATCAAGGTAGACTTTTCGTTTGG............................................................................................................................................................................................................ 26 0 5 0.80 4 3 1 0 0 0 0 0 0
............................................TGGTCTTACGATCACACATCCTGTAGAC................................................................................................................................................................................... 28 0 3 0.67 2 0 2 0 0 0 0 0 0
....................................................................................................................................TACGATATTGACAGATCCATCTGA............................................................................................... 24 0 8 0.50 4 2 2 0 0 0 0 0 0
.........................TCAAGGTAGACTTTTCGTTTGGTCT......................................................................................................................................................................................................... 25 0 6 0.50 3 3 0 0 0 0 0 0 0
..................................................TACGATCACACATCCTGTAGACCC................................................................................................................................................................................. 24 0 6 0.50 3 3 0 0 0 0 0 0 0
..........................................................CACATCCTGTAGACCCAAGCGA........................................................................................................................................................................... 22 0 7 0.43 3 0 3 0 0 0 0 0 0
.....................TACATCAAGGTAGACTTTTCGTT............................................................................................................................................................................................................... 23 0 8 0.38 3 3 0 0 0 0 0 0 0
..................................................TACGATCACACATCCTGTAGACCCAAGC............................................................................................................................................................................. 28 0 6 0.33 2 2 0 0 0 0 0 0 0
..................................................TACGATCACACATCCTGTAGACCCAA............................................................................................................................................................................... 26 0 6 0.33 2 2 0 0 0 0 0 0 0
.................................................................TGTAGACCCAAGCGACAGCACGCAT................................................................................................................................................................. 25 0 3 0.33 1 0 1 0 0 0 0 0 0
..................................................TACGATCACACATCCTGTAGACCCA................................................................................................................................................................................ 25 0 6 0.33 2 2 0 0 0 0 0 0 0
...........................AAGGTAGACTTTTCGTTTGGTCT......................................................................................................................................................................................................... 23 0 6 0.33 2 2 0 0 0 0 0 0 0
..................................................TACGATCACACATCCTGTAGACCCAAG.............................................................................................................................................................................. 27 0 6 0.33 2 2 0 0 0 0 0 0 0
.........................TCAAGGTAGACTTTTCGTTTGGTC.......................................................................................................................................................................................................... 24 0 6 0.33 2 1 1 0 0 0 0 0 0
.......................CATCAAGGTAGACTTTTCGTTTGGTC.......................................................................................................................................................................................................... 26 0 6 0.33 2 1 0 0 0 1 0 0 0
.....................TACATCAAGGTAGACTTTTCGTTT.............................................................................................................................................................................................................. 24 0 7 0.29 2 2 0 0 0 0 0 0 0
..........................CACAGTAGACTTTTCGTTTGGTCT......................................................................................................................................................................................................... 24 2 8 0.25 2 1 1 0 0 0 0 0 0
..........................CAAGGTAGACTTTTCGTTT.............................................................................................................................................................................................................. 19 0 8 0.25 2 2 0 0 0 0 0 0 0
....................................................................................................................................TACGATATTGACAGATCCATCTGAAGAC........................................................................................... 28 0 8 0.25 2 1 1 0 0 0 0 0 0
............................................................................................................................TCCCTGAATACGATATTGACAGATCCA.................................................................................................... 27 0 8 0.25 2 2 0 0 0 0 0 0 0
.................................GACTTTTCGTTTGGTCTTACGATC.................................................................................................................................................................................................. 24 0 5 0.20 1 0 1 0 0 0 0 0 0
......................ACATCAAGGTAGACTTTTCGTTTGGAC.......................................................................................................................................................................................................... 27 1 5 0.20 1 0 1 0 0 0 0 0 0
.....................................TTTCGTTTGGTCTTACGATCACAC.............................................................................................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0 0 0
...............................................................................................TTGTAAATGAAGATAAC........................................................................................................................................... 17 0 5 0.20 1 0 1 0 0 0 0 0 0
...............................TAGACTTTTCGTTTGGTCTTACGA.................................................................................................................................................................................................... 24 0 5 0.20 1 0 1 0 0 0 0 0 0
....................................TTTTCGTTTGGTCTTACGATA.................................................................................................................................................................................................. 21 1 5 0.20 1 1 0 0 0 0 0 0 0
...............................TAGAATTTTCGTTTGGTCTTACGA.................................................................................................................................................................................................... 24 1 5 0.20 1 0 1 0 0 0 0 0 0
......................ACATCAAGGTAGACTTTTCGTTTGGTC.......................................................................................................................................................................................................... 27 0 5 0.20 1 0 1 0 0 0 0 0 0
.....................................TTTCGTTTGGTCTTACGATCACA............................................................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0 0 0 0 0
......................................TTCGTTTGGTCTTACGATCAC................................................................................................................................................................................................ 21 0 5 0.20 1 1 0 0 0 0 0 0 0
...................................ATTTTCGTTTGGTCTTACGA.................................................................................................................................................................................................... 20 1 5 0.20 1 0 1 0 0 0 0 0 0
......................................TTCGTTTGGTCTTACGATCACAC.............................................................................................................................................................................................. 23 0 5 0.20 1 1 0 0 0 0 0 0 0
.........................TCAAGGTAGACTTTCCGTTTGG............................................................................................................................................................................................................ 22 1 6 0.17 1 1 0 0 0 0 0 0 0
........................ATCAAGGTAGACTTTTCGTTTGGTCT......................................................................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0
..........................CAAGGTAGACTTTTCGTTTGGTC.......................................................................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0
.........................TCAAGGTAGACTTTTCGTTTGGT........................................................................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0
...............................................ACTTACGATCACACATCCTGTAGACCCA................................................................................................................................................................................ 28 1 6 0.17 1 1 0 0 0 0 0 0 0
.................................................TTACGATCACACATCCTGTAGACCC................................................................................................................................................................................. 25 0 6 0.17 1 0 0 1 0 0 0 0 0
..................................................TACGATCACACATCCTGTAGACCCAAGCG............................................................................................................................................................................ 29 0 6 0.17 1 1 0 0 0 0 0 0 0
..........................CAAGGTAGACTTTTCGTTTGGTCTTA....................................................................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0
....................CTACATCAAGGGAGACTTTTCGTT............................................................................................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0 0 0
................TCAGCTACATCAAGGTAGACTTTTCGT................................................................................................................................................................................................................ 27 0 7 0.14 1 0 0 1 0 0 0 0 0
................................................CTTACGATCACACATCCTGTAGACC.................................................................................................................................................................................. 25 0 7 0.14 1 1 0 0 0 0 0 0 0
.............................................................ATCCTGTAGACCCAAGCGAC.......................................................................................................................................................................... 20 0 7 0.14 1 0 0 1 0 0 0 0 0
..........................CAAGGTAGACTTTTCGTTTG............................................................................................................................................................................................................. 20 0 7 0.14 1 0 0 0 0 1 0 0 0
...............................................TCTTACGATCACACATCCTGTAGACC.................................................................................................................................................................................. 26 0 7 0.14 1 1 0 0 0 0 0 0 0
..........................................................CACATCCTGTAGACCCAAGCGAC.......................................................................................................................................................................... 23 0 7 0.14 1 1 0 0 0 0 0 0 0
................TCAGCTACATCAAGGTAGACTTTTCGTT............................................................................................................................................................................................................... 28 0 7 0.14 1 1 0 0 0 0 0 0 0
........................................................CACACATCCTGTAGACCCAAGCGAC.......................................................................................................................................................................... 25 0 7 0.14 1 0 0 1 0 0 0 0 0
.AGATCTTCTTTAATGTCAGC...................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 0 0 1 0
....................................................................................................................................TACGATATTGACAGATCCATCTGAAA............................................................................................. 26 1 8 0.13 1 0 1 0 0 0 0 0 0
....................................................................................................................................TACGATATTGACAGATCCATCTGAAGT............................................................................................ 27 1 8 0.13 1 1 0 0 0 0 0 0 0
....................................................................................................................................TACGATATTGACAGATCCATCTG................................................................................................ 23 0 8 0.13 1 1 0 0 0 0 0 0 0
............................................................................................................................TCCCTGAATACGATATTGACAGATCCAT................................................................................................... 28 0 8 0.13 1 1 0 0 0 0 0 0 0
....................................................................................................................................TACGATATTGACAGATCCATCGG................................................................................................ 23 1 8 0.13 1 0 1 0 0 0 0 0 0
.........................................................................................................................AACTCCCTGAATACGATATTGACAGA........................................................................................................ 26 0 8 0.13 1 0 0 1 0 0 0 0 0
................................................................................................................................TGAATACGATATTGACAGAT....................................................................................................... 20 0 8 0.13 1 0 0 1 0 0 0 0 0
.....................................................................................................................................ACGATATTGACAGATCCATCTGAAGAC........................................................................................... 27 0 8 0.13 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................ACGTCTGAAGTTCCTAGATTCCAT............. 24 0 8 0.13 1 1 0 0 0 0 0 0 0
............................................................................................................................................TGACAGATCCATCTGAAGACATCT....................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0 0
.........................TCACAGTAGACTTTTCGTTTGGTCT......................................................................................................................................................................................................... 25 2 8 0.13 1 1 0 0 0 0 0 0 0
................................................................................................................................TGAATACGATATTGACAGATCCAT................................................................................................... 24 0 8 0.13 1 0 1 0 0 0 0 0 0
...............TTCAGCTACATCAAGGTAGACT...................................................................................................................................................................................................................... 22 0 8 0.13 1 1 0 0 0 0 0 0 0
..................................................................................................................................AATACGATATTGACAGATCCATCT................................................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0 0
...........................ACAGTAGACTTTTCGTTTGGTCT......................................................................................................................................................................................................... 23 2 8 0.13 1 1 0 0 0 0 0 0 0
......................ACATCAAGGTAGACTTTTCGTT............................................................................................................................................................................................................... 22 0 8 0.13 1 1 0 0 0 0 0 0 0
..............................................................................................................................CCTGAATACGATATTGACAGATCCATC.................................................................................................. 27 0 8 0.13 1 1 0 0 0 0 0 0 0
...................................................................................................................................ATACGATATTGACAGATCCATCTGAA.............................................................................................. 26 0 8 0.13 1 1 0 0 0 0 0 0 0
....................................................................................................................................TACGATATTGACAGATCCATCTGAAGACA.......................................................................................... 29 0 8 0.13 1 1 0 0 0 0 0 0 0
.....................................................................................................................................ACGATATTGACAGATCCATCTGAAG............................................................................................. 25 0 8 0.13 1 1 0 0 0 0 0 0 0
.....................................................................................................................................ACGATATTGACAGATCCATCTGA............................................................................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0
.........................................................................................................................................TATTGACAGATCCATCTGAAGAC........................................................................................... 23 0 9 0.11 1 0 0 0 1 0 0 0 0
.........................................................................................................................................TATTGACAGATCCATCTGAAGACA.......................................................................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0
.........................................................................................................................................TATTGACAGATCCATCTGAAGA............................................................................................ 22 0 9 0.11 1 1 0 0 0 0 0 0 0
............................................................................................................................................TAACAGATCCATCTGATGAGAT......................................................................................... 22 3 10 0.10 1 0 0 0 0 0 0 0 1
.......................................................................................................................................................................TGATTGATAACGTAAACTTGAAA............................................................. 23 3 11 0.09 1 0 1 0 0 0 0 0 0
.......................................................................................................................................................................TTATTGATAACGTAAACTTGCTTC............................................................ 24 1 12 0.08 1 0 0 0 1 0 0 0 0

Anti-sense strand reads

ATGTCGAAGAAATTAAAGTCGATGTAGTTCCATCTGAAAAGCAAACCAGAATGCTAGTGTGTAGGACATCTGGGTTCGCTGTCGTGCGTAATCGGAACATTTACTTCTATTGGAAAGGTCGTTGAGGGACTTATGCTATAACTGTCTAGGTAGACTTCTGTAGAGTAAATAACTATTGCATTTGAACGTAGAATGAAGGTCAAGGCTCAGTTGTTGCAGACTTCAAGGATCTAAGGTATCTGAACGCAGGA
**********************************************************************************************.....................(((......))).((((..((((....((((.....))))...))))....))))............((((....))))..******************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR902010
ovaries
 M040
female body
 SRR902011
testis
 V112
male body		 GSM444067
head
 M062
head
 M022
male body		 SRR902012
CNS imaginal disc
 M059
embryo
......................................................................................................................................................................................................................TGCAGACTTCAAGGATCTAAGGTA............. 24 0 8 17.00 136 83 29 24 0 0 0 0 0 0
............................................................................................................................................ACTGTCTAGGTAGACT............................................................................................... 16 0 9 9.56 86 55 0 31 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCAGACTTCAAGGATCTAAGGTA............. 23 0 8 6.13 49 21 19 9 0 0 0 0 0 0
...............................................................................................................................................GTTTAGGTAGGCTTCTGTAG........................................................................................ 20 2 9 5.11 46 0 38 0 8 0 0 0 0 0
..............................................................................................................................................AGTTTAGGTAGGCTTCTGTAG........................................................................................ 21 3 13 3.62 47 0 37 0 9 0 0 0 0 1
...............................................................................................................................................GTTTAGGTAGGCTTCTGTA......................................................................................... 19 2 12 1.75 21 0 17 0 4 0 0 0 0 0
....................................................................................................................................................................................................................GTTGCAGACTTCAAGGATCTAAGGTA............. 26 0 8 1.38 11 3 4 3 1 0 0 0 0 0
.....................................................................................................................................................................................................................TTGCAGACTTCAAGGATCTAAGGTA............. 25 0 8 1.25 10 4 5 0 1 0 0 0 0 0
................................................................................................................................................TTTAGGTAGGCTTCTGTAG........................................................................................ 19 2 20 1.15 23 0 23 0 0 0 0 0 0 0
...............................................................................................................................................GTTTAGGTAGGCTTCTGT.......................................................................................... 18 2 20 0.80 16 0 15 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................CTGCAGACTTCAAGGATCTAAGGTA............. 25 1 8 0.63 5 0 0 4 1 0 0 0 0 0
................................................................................................................................................................................................................ACTTGTTCCATACTTCAAGGAT..................... 22 3 2 0.50 1 0 0 0 0 0 1 0 0 0
.....................ATGTAGTTCCATCTGAAAAGCAAAC............................................................................................................................................................................................................. 25 0 6 0.50 3 3 0 0 0 0 0 0 0 0
................................TCTGTCAAGCAAACCAGAA........................................................................................................................................................................................................ 19 2 6 0.50 3 0 3 0 0 0 0 0 0 0
..........................................................GTGTAGGACATCTGGGTTCGCTGT......................................................................................................................................................................... 24 0 7 0.43 3 0 3 0 0 0 0 0 0 0
...................................GAAAAGCAAACCAGAATGCTAGTGT............................................................................................................................................................................................... 25 0 5 0.40 2 0 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TGCAGACTCTAAGGATCTAAGGTA............. 24 2 8 0.38 3 3 0 0 0 0 0 0 0 0
........................................GCAAACCAGAATGCTAGTGTGT............................................................................................................................................................................................. 22 0 3 0.33 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................CTTGTGACAGACTTCAAGGAT..................... 21 3 4 0.25 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................GTTGCAGACTTCAAGGATCTAAGGT.............. 25 0 8 0.25 2 0 2 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CAGACTTCAAGGATCTAAGGTA............. 22 0 8 0.25 2 0 0 2 0 0 0 0 0 0
...................................................................................................................................................................................................ATGGTCAAGACTCAGTTG...................................... 18 2 4 0.25 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................AGCAGACTTCAAGGATCTAAGGTA............. 24 1 8 0.25 2 0 2 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CTTTTTCCAGACTTCAAGGAT..................... 21 3 4 0.25 1 0 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................TGCAGACTTCAAGGATCTAAGGT.............. 23 0 8 0.25 2 0 2 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGACTTCAAGGATCTAAGGTA............. 21 0 8 0.25 2 1 0 1 0 0 0 0 0 0
..............................................CAGAATGCTAGTGTGTAGGA......................................................................................................................................................................................... 20 0 4 0.25 1 0 0 1 0 0 0 0 0 0
......................................................................................................................TCGTTGAGGGACTTATGCTATAAC............................................................................................................. 24 0 9 0.22 2 0 2 0 0 0 0 0 0 0
............................................................................................................................................ACTGTCTAGGTAGACTT.............................................................................................. 17 0 9 0.22 2 1 0 1 0 0 0 0 0 0
.......................................................................................................................CGTTGAGGGACTTATGCTATAAC............................................................................................................. 23 0 9 0.22 2 0 1 1 0 0 0 0 0 0
....................................AAAAGCAAACCAGAATGCTAGTGT............................................................................................................................................................................................... 24 0 5 0.20 1 0 1 0 0 0 0 0 0 0
.................................CTGAAAAGCAAACCAGAATGCTAGTGT............................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0 0 0 0
................................TCTGTCAAGCAAACCAGAAAG...................................................................................................................................................................................................... 21 3 16 0.19 3 0 2 0 0 0 0 1 0 0
...............................................AGAATGCTAGTGTGTAGGACATCTGGGT................................................................................................................................................................................ 28 0 6 0.17 1 0 0 0 1 0 0 0 0 0
.................................CTGTCAAGCAAACCAGAAAGC..................................................................................................................................................................................................... 21 3 18 0.17 3 0 2 0 0 1 0 0 0 0
.........................................................TGTGTAGGACATCTGGGTT............................................................................................................................................................................... 19 0 7 0.14 1 0 1 0 0 0 0 0 0 0
.........................................................TGTGTAGGACATCTGGGTTCGCTGT......................................................................................................................................................................... 25 0 7 0.14 1 0 1 0 0 0 0 0 0 0
.............................................................................................................TTGGAAAGGTCGTTGAGGGACTTATG.................................................................................................................... 26 0 7 0.14 1 0 1 0 0 0 0 0 0 0
................................TCTGTCAAGCAAACCAGAAAGC..................................................................................................................................................................................................... 22 3 14 0.14 2 0 2 0 0 0 0 0 0 0
...............................................................................................................GGAAAGGTCGTTGAGGGACTTAT..................................................................................................................... 23 0 7 0.14 1 0 1 0 0 0 0 0 0 0
............................................................................................................................AGGGACTTATGCTATAACTGT.......................................................................................................... 21 0 8 0.13 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................GTCGTTGAGGGACTTATGCTA................................................................................................................. 21 0 8 0.13 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................GTCGTTGAGGGACTTATGCTATAACT............................................................................................................ 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCAGACTTCAAGGATCTAAGGT.............. 22 0 8 0.13 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................GCAGACTTCAAGGATCTAAGG............... 21 0 8 0.13 1 0 1 0 0 0 0 0 0 0
....................................................................................................................GGTCGTTGAGGGACTTATGCTA................................................................................................................. 22 0 8 0.13 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TTGTTCCATACTTCAAGGGT..................... 20 3 8 0.13 1 0 0 0 0 1 0 0 0 0
.....................................................................................................................GTCGTTGAGGGACTTATGCTATAAC............................................................................................................. 25 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................ATAACTGTCTAGGTAGACTTCTGT.......................................................................................... 24 0 9 0.11 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................TGTCTAGGTAGACTTCTGTAG........................................................................................ 21 0 9 0.11 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................GAGGGACTTATGCTATAAC............................................................................................................. 19 0 9 0.11 1 0 0 1 0 0 0 0 0 0
.............................................................................................................................GGGACTTATGCTATAACTG........................................................................................................... 19 0 9 0.11 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................CAGACTTCAAGGATCTAAGGT.............. 21 0 9 0.11 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................CGTTGAGGGACTTATGCTATA............................................................................................................... 21 0 9 0.11 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................ACTGTCTAGGTAGACTTCT............................................................................................ 19 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.................................CTGTCAAGCAAACCAGAAAG...................................................................................................................................................................................................... 20 3 20 0.10 2 0 2 0 0 0 0 0 0 0
.................................CTGTCAAGCAAACCAGAA........................................................................................................................................................................................................ 18 2 12 0.08 1 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................GCATACTTCAAGGAT..................... 15 1 12 0.08 1 0 0 0 0 0 0 0 1 0
................................................................................................ACATTTCCTAATATTGGAAA....................................................................................................................................... 20 3 13 0.08 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................GTTTAGGTAGGCATCTGTAG........................................................................................ 20 3 19 0.05 1 0 0 0 1 0 0 0 0 0
................................TCTGTCAAGCAAACCAGAAA....................................................................................................................................................................................................... 20 3 19 0.05 1 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_singleton_2007:575-825 - dps_2305 TACAGCTTCTTTAATTTCAGCTACATCAAGGTAGACTTTTCGTTTGGTCTTACGATCACACATCCTGTAGACCCAAGCGACAGCACGCATTAGCCTTGTAAATGAAGATAACCTTTCCAGCAACTCCCTGAATACGATATTGACAGATCCATCTGAAGACATCTCATTTATTGATAACGTAAACTTGCATCTTACTTCCAGTTCCGAGTCAACAACGTCT-GAAGTTCCTAGATTCCATAGACTTGCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT
droPer2 scaffold_178:48397-48647 - TACAGCTTCTTTAATTTCAGCTACATCAAGGTAGACTTTTCGTTTGGTCTTACGATCACACATCCTGTAGACCCAAGCGACAGCACGCATCAGCCTTGTAAATGAAGATAACCCTTCCAGCAACTCCCTGAATACGATATTGACAGATCCATCTGAAGACATCTCATTTATTGATAACGTAAACTTGCATCTTACTTCCAGTTCCGTGTCACCAACGTCT-GAAGTTCCTAGATTCCATAGACTTGCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT
droWil2 scf2_1100000004960:213025-213252 + TTCGGAG-----------------------TTA--TAGGATCCCCTGTCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTATCT-------------ATGGCAATGTGCGTCAAAGGCCGTGAATTAACAATATTTTCAGCTTCGCACATCAAGCTGTAAAGGGTATCCTCCTTTAAATTTCCTTGTAGTAGCACGTGTCCCATAGCTCGTTTTACACTTCGAACTAAACGTTCCCAACATCCGCCTGCATGTCGATTCAATGGGCAGTTAAAAAGCCACTCGATTTTTTCG
droMoj3 scaffold_6473:9129122-9129170 + GAGGAGG-----------------------GCGAATTGGTGCGTTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GTGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG
droAna3 scaffold_12911:1173357-1173515 + TGGGTGA-----------------------GCGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGAATTAACAATATTCTCCGCCTCTATCAGGAAACTCTCCAGTAC---------------------------TGTGTGACGCAGCACCGTCTTCACGCACTGCACCATTCGCTCCCAGACTCCACGCTCTGACTGGTTCGCTGGGCAATTAAAGATCCATTCAATGCCCTTA
droBip1 scf7180000396431:788892-788940 + GAGGAGG-----------------------GCGAGCTGGTGCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GATT-GTA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG
droKik1 scf7180000302344:1432905-1432953 + GAGGAGG-----------------------GTGAACTGGTCCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG
droFic1 scf7180000453829:1036378-1036422 + GAGGAGG-----------------------GCGAACTGGTCCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTACATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491006:2593099-2593147 + GAGGAGG-----------------------GTGAATTGGTCCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG
droRho1 scf7180000779193:15184-15421 - CTCAGCCTTATCGATTTCCGCGACCTCCAGTAAGGGTTTCCTACTGGTTTTTCGTCTGCACAGACGGTAGACCCACGCAACGACTCGTACCAATCTTGTGAATGAGGAAAACCTTTCCAACAAATTCTTGATCTCAACATTGACGGTATCGGCTGGAACTTCCTCGCTGACAGATAGAATAAATTTGGGTGGCAGTTCCAGCTCTGTTGTGCTTACGATT-GTA-------------ATTCCCAGGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT
droBia1 scf7180000301760:5024985-5025033 + GAGGAGG-----------------------GCGAACTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTACATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG
droTak1 scf7180000410628:18195-18441 - CTCAGCCTTGTTGATTTCCGCGACCTTCAGAAAGGGTTTCCTAATGGTTTTTCGACTGCACAGACGGTAAACCCACGCCACGACTCGTACTAATCTTGTGAATGAGGAAAACCTTTCCAACCAATTCTTGATCTCAACATTGACAGTATCGGCTGGAACTTC----CTGACAGAAAGAATAAATTTGGGTCGCAGTTCCAGCTCTGTTGTGCTTATGATC-GGGTCCCCATATTGTGATTCCCAAGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT
droEug1 scf7180000408828:5323-5550 + TTTGGCG-----------------------TTAACGGCGCCTCTTTGTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAT-CCA-------------GTGG-CATGTGGGTGAGCGGACGCGAATTGACTTTGTTTTCCGCCTCTATTAGGAGACTCTCCAAAACATGGTCCCTCGGCGCGACTTCCTTTAGGGTATGGCGCAGCACTCGCTTGACGCACTGAACCATCCGCTCCAATACTCCGCCCTCAGACGGGTTGGATGGGCAATTAAAGACCCATTCAATGCTCCTG
dm3 chrX:9064183-9064231 + GAGGAGG-----------------------GAGAATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG
droSim2 x:8610346-8610394 + GAGGAGG-----------------------GCGAATTGGTACGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG
droSec2 scaffold_271:1176-1362 + GTGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGCGGGCGGGAATTCACTATGTTCTCCGCTTCGATCATCAAGTTCTCCAGCACTGGCTTCTTGGGTGCAAGTTCCTTAATCGTATGCGCCAAAACCTTTTTCACGCACTGGACCATCCTTACCCAGACACCTCCCTCACCTGGGTTTGATGGGCAGTTAAAGATCCATTTGATTCCTTTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TACAGCTTCTTTAATTTCAGCTACATCAAGGTAGACTTTTCGTTTGGTCTTACGATCACACATCCTGTAGACCCAAGCGACAGCACGCATTAGCCTTGTAAATGAAGATAACCTTTCCAGCAACTCCCTGAATACGATATTGACAGATCCATCTGAAGACATCTCATTTATTGATAACGTAAACTTGCATCTTACTTCCAGTTCCGAGTCAACAACGTCT-GAAGTTCCTAGATTCCATAGACTTGCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................TACGATATTGACAGATCCATCTGAA...................................................................................................................................................................................................................................................................................2582.25180500000850
....................................................................................................................................TACGATATTGACAGATCCATCTGAAG..................................................................................................................................................................................................................................................................................2681.63130900000040
.......................................................TCACACATCCTGTAGACCCAAGCGA................................................................................................................................................................................................................................................................................................................................................................2571.2990200000700
................................................................................................................................TGAATACGATATTGACAGATCCATC.......................................................................................................................................................................................................................................................................................2581.1390711000000
....................................................................................................................................TACGATATTGACAGATCCATCTGAAGA.................................................................................................................................................................................................................................................................................2781.0080600000020
...............................TAGACTTTTCGTTTGGTCTTACGATC.......................................................................................................................................................................................................................................................................................................................................................................................2651.0050300000020
..................................................TACGATCACACATCCTGTAGACC.......................................................................................................................................................................................................................................................................................................................................................................2370.8660500000100
..........................CAAGGTAGACTTTTCGTTTGGTCT..............................................................................................................................................................................................................................................................................................................................................................................................2460.8350500000000
.....................TACATCAAGGTAGACTTTTCGTTTGG.................................................................................................................................................................................................................................................................................................................................................................................................2650.8040300000010
............................................TGGTCTTACGATCACACATCCTGTAGAC........................................................................................................................................................................................................................................................................................................................................................................2830.6720000000020
....................................................................................................................................TACGATATTGACAGATCCATCTGA....................................................................................................................................................................................................................................................................................2480.5040200000020
.........................TCAAGGTAGACTTTTCGTTTGGTCT..............................................................................................................................................................................................................................................................................................................................................................................................2560.5030300000000
..................................................TACGATCACACATCCTGTAGACCC......................................................................................................................................................................................................................................................................................................................................................................2460.5030300000000
..........................................................CACATCCTGTAGACCCAAGCGA................................................................................................................................................................................................................................................................................................................................................................2270.4330000000030
.....................TACATCAAGGTAGACTTTTCGTT....................................................................................................................................................................................................................................................................................................................................................................................................2380.3830300000000
..................................................TACGATCACACATCCTGTAGACCCAAGC..................................................................................................................................................................................................................................................................................................................................................................2860.3320200000000
..................................................TACGATCACACATCCTGTAGACCCAA....................................................................................................................................................................................................................................................................................................................................................................2660.3320200000000
.................................................................TGTAGACCCAAGCGACAGCACGCAT......................................................................................................................................................................................................................................................................................................................................................2530.3310000000010
..................................................TACGATCACACATCCTGTAGACCCA.....................................................................................................................................................................................................................................................................................................................................................................2560.3320200000000
...........................AAGGTAGACTTTTCGTTTGGTCT..............................................................................................................................................................................................................................................................................................................................................................................................2360.3320200000000
..................................................TACGATCACACATCCTGTAGACCCAAG...................................................................................................................................................................................................................................................................................................................................................................2760.3320200000000
.........................TCAAGGTAGACTTTTCGTTTGGTC...............................................................................................................................................................................................................................................................................................................................................................................................2460.3320100000010
.......................CATCAAGGTAGACTTTTCGTTTGGTC...............................................................................................................................................................................................................................................................................................................................................................................................2660.3320100001000
.....................TACATCAAGGTAGACTTTTCGTTT...................................................................................................................................................................................................................................................................................................................................................................................................2470.2920200000000
..........................CAAGGTAGACTTTTCGTTT...................................................................................................................................................................................................................................................................................................................................................................................................1980.2520200000000
....................................................................................................................................TACGATATTGACAGATCCATCTGAAGAC................................................................................................................................................................................................................................................................................2880.2520100000010
............................................................................................................................TCCCTGAATACGATATTGACAGATCCA.........................................................................................................................................................................................................................................................................................2780.2520200000000
.................................GACTTTTCGTTTGGTCTTACGATC.......................................................................................................................................................................................................................................................................................................................................................................................2450.2010000000010
.....................................TTTCGTTTGGTCTTACGATCACAC...................................................................................................................................................................................................................................................................................................................................................................................2450.2010100000000
...............................................................................................TTGTAAATGAAGATAAC................................................................................................................................................................................................................................................................................................................................1750.2010000000010
...............................TAGACTTTTCGTTTGGTCTTACGA.........................................................................................................................................................................................................................................................................................................................................................................................2450.2010000000010
....................................TTTTCGTTTGGTCTTACGATA.......................................................................................................................................................................................................................................................................................................................................................................................2150.2010100000000
......................ACATCAAGGTAGACTTTTCGTTTGGTC...............................................................................................................................................................................................................................................................................................................................................................................................2750.2010000000010
.....................................TTTCGTTTGGTCTTACGATCACA....................................................................................................................................................................................................................................................................................................................................................................................2350.2010100000000
......................................TTCGTTTGGTCTTACGATCAC.....................................................................................................................................................................................................................................................................................................................................................................................2150.2010100000000
......................................TTCGTTTGGTCTTACGATCACAC...................................................................................................................................................................................................................................................................................................................................................................................2350.2010100000000
........................ATCAAGGTAGACTTTTCGTTTGGTCT..............................................................................................................................................................................................................................................................................................................................................................................................2660.1710100000000
..........................CAAGGTAGACTTTTCGTTTGGTC...............................................................................................................................................................................................................................................................................................................................................................................................2360.1710100000000
.........................TCAAGGTAGACTTTTCGTTTGGT................................................................................................................................................................................................................................................................................................................................................................................................2360.1710100000000
.................................................TTACGATCACACATCCTGTAGACCC......................................................................................................................................................................................................................................................................................................................................................................2560.1710000000100
..................................................TACGATCACACATCCTGTAGACCCAAGCG.................................................................................................................................................................................................................................................................................................................................................................2960.1710100000000
..........................CAAGGTAGACTTTTCGTTTGGTCTTA............................................................................................................................................................................................................................................................................................................................................................................................2660.1710100000000
................TCAGCTACATCAAGGTAGACTTTTCGT.....................................................................................................................................................................................................................................................................................................................................................................................................2770.1410000000100
................................................CTTACGATCACACATCCTGTAGACC.......................................................................................................................................................................................................................................................................................................................................................................2570.1410100000000
.............................................................ATCCTGTAGACCCAAGCGAC...............................................................................................................................................................................................................................................................................................................................................................2070.1410000000100
..........................CAAGGTAGACTTTTCGTTTG..................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000001000
...............................................TCTTACGATCACACATCCTGTAGACC.......................................................................................................................................................................................................................................................................................................................................................................2670.1410100000000
..........................................................CACATCCTGTAGACCCAAGCGAC...............................................................................................................................................................................................................................................................................................................................................................2370.1410100000000
................TCAGCTACATCAAGGTAGACTTTTCGTT....................................................................................................................................................................................................................................................................................................................................................................................................2870.1410100000000
........................................................CACACATCCTGTAGACCCAAGCGAC...............................................................................................................................................................................................................................................................................................................................................................2570.1410000000100
....................................................................................................................................TACGATATTGACAGATCCATCTGAAA..................................................................................................................................................................................................................................................................................2680.1310000000010
....................................................................................................................................TACGATATTGACAGATCCATCTGAAGT.................................................................................................................................................................................................................................................................................2780.1310100000000
....................................................................................................................................TACGATATTGACAGATCCATCTG.....................................................................................................................................................................................................................................................................................2380.1310100000000
............................................................................................................................TCCCTGAATACGATATTGACAGATCCAT........................................................................................................................................................................................................................................................................................2880.1310100000000
.........................................................................................................................AACTCCCTGAATACGATATTGACAGA.............................................................................................................................................................................................................................................................................................2680.1310000000100
................................................................................................................................TGAATACGATATTGACAGAT............................................................................................................................................................................................................................................................................................2080.1310000000100
.....................................................................................................................................ACGATATTGACAGATCCATCTGAAGAC................................................................................................................................................................................................................................................................................2780.1310100000000
......................................................................................................................................................................................................................ACGTCT-GAAGTTCCTAGATTCCAT.................................................................................................................................................................................................2480.1310100000000
............................................................................................................................................TGACAGATCCATCTGAAGACATCT............................................................................................................................................................................................................................................................................2480.1310100000000
................................................................................................................................TGAATACGATATTGACAGATCCAT........................................................................................................................................................................................................................................................................................2480.1310000000010
...............TTCAGCTACATCAAGGTAGACT...........................................................................................................................................................................................................................................................................................................................................................................................................2280.1310100000000
..................................................................................................................................AATACGATATTGACAGATCCATCT......................................................................................................................................................................................................................................................................................2480.1310100000000
......................ACATCAAGGTAGACTTTTCGTT....................................................................................................................................................................................................................................................................................................................................................................................................2280.1310100000000
..............................................................................................................................CCTGAATACGATATTGACAGATCCATC.......................................................................................................................................................................................................................................................................................2780.1310100000000
...................................................................................................................................ATACGATATTGACAGATCCATCTGAA...................................................................................................................................................................................................................................................................................2680.1310100000000
....................................................................................................................................TACGATATTGACAGATCCATCTGAAGACA...............................................................................................................................................................................................................................................................................2980.1310100000000
.....................................................................................................................................ACGATATTGACAGATCCATCTGAAG..................................................................................................................................................................................................................................................................................2580.1310100000000
.....................................................................................................................................ACGATATTGACAGATCCATCTGA....................................................................................................................................................................................................................................................................................2380.1310100000000
.........................................................................................................................................TATTGACAGATCCATCTGAAGAC................................................................................................................................................................................................................................................................................2390.1110010000000
.........................................................................................................................................TATTGACAGATCCATCTGAAGACA...............................................................................................................................................................................................................................................................................2490.1110100000000
.........................................................................................................................................TATTGACAGATCCATCTGAAGA.................................................................................................................................................................................................................................................................................2290.1110100000000
droPer2
TACAGCTTCTTTAATTTCAGCTACATCAAGGTAGACTTTTCGTTTGGTCTTACGATCACACATCCTGTAGACCCAAGCGACAGCACGCATCAGCCTTGTAAATGAAGATAACCCTTCCAGCAACTCCCTGAATACGATATTGACAGATCCATCTGAAGACATCTCATTTATTGATAACGTAAACTTGCATCTTACTTCCAGTTCCGTGTCACCAACGTCT-GAAGTTCCTAGATTCCATAGACTTGCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................TGAAGACATCTCATTTATTGATAACGT............................................................................................................................................................................................................................................................27200.153000003
.....................TACATCAAGGTAGACTTTTCGT.....................................................................................................................................................................................................................................................................................................................................................................................................22200.102000002
.....................................................................................................................................................................................................................................TAGATTCCATAGACTTGCGT.......................................................................................................................................................................................20200.051000001
....................................................................................................................................................................................................................................CTAGATTCCATAGACTTGCG........................................................................................................................................................................................20200.051000001
droWil2
TTCGGAG-----------------------TTA--TAGGATCCCCTGTCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTATCT-------------ATGGCAATGTGCGTCAAAGGCCGTGAATTAACAATATTTTCAGCTTCGCACATCAAGCTGTAAAGGGTATCCTCCTTTAAATTTCCTTGTAGTAGCACGTGTCCCATAGCTCGTTTTACACTTCGAACTAAACGTTCCCAACATCCGCCTGCATGTCGATTCAATGGGCAGTTAAAAAGCCACTCGATTTTTTCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................TACACTTCGAACTAAACGTTCCCAACATC..................................................2951.00505000
.................................................................................................................................................................................................................................................................................................................................................................TACACTTCGAACTAAACGTTCCCAACA....................................................2750.60303000
.............................................................................................................................................................................................................................................................................................................................................................................TAAACGTTCCCAACATCCGCCTGCATG........................................2770.43303000
.............................................................................................................................................................................................................................................................................................................................................................................TAAACGTTCCCAACATCCGCCTGCATGT.......................................2870.29202000
................................................................................................................................................................................................................................................................................................................................................TGTCCCATAGCTCGTTTTACACTTCGAAC...................................................................2940.25101000
......................................................................................................................................................................................................................................................................................................................................................................TTCGAACTAAACGTTCCCAACATCCGCC..............................................2850.20101000
.................................................................................................................................................................................................................................................................................................................................CCTTGTAGTAGCACGTGTCCCATAGC.....................................................................................2650.20101000
................................................................................................................................................................................................................................................................................................................................TCCTTGTAGTAGCACGTGTCCCATAGC.....................................................................................2750.20101000
................................................................................................................................................................................................................................................................................................................................................................TTACACTTCGAACTAAACGTTCCCAACA....................................................2850.20101000
..................................................................................................................................................................................................................................................................................................................................................................ACACTTCGAACTAAACGTTCCCAACATC..................................................2850.20101000
.........................................................................................................................................................................................................................................................................................................................................TAGCACGTGTCCCATAGCTCGTT................................................................................2350.20101000
...........................................................................................................................................................................................................................................................................................................................................................................ACTAAACGTTCCCAACATCCG................................................2160.17100010
..................................................................................................................................................................................................................................................................................................................................................TCCCATAGCTCGTTTTACACTTCGAACC..................................................................2860.17101000
..............................................................................................................................................................................................................................................................................................................................................................................AAACGTTCCCAACATCCGCCTGCA..........................................2470.14101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAAGCCACTCGATTTTT...2080.13101000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCAATGGGCAGTTAAAAAGCCACTCGATT......2990.11101000
.........................................................................................................................................................................................................................................................................TAACAATATTTTCAGCTTCGCACATCA............................................................................................................................................27100.10101000
........................................TCCCCTGTCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACTATCT-------------ATGGCAATG..........................................................................................................................................................................................27100.10101000
.TCGGAG-----------------------TTA--TAGGATCCCCTGTCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAC.....................................................................................................................................................................................................................27100.10100010
......................................................................................................................................................................................................................................................TGCGTCAAAGGCCGTGAATTAACAATA...............................................................................................................................................................27100.10101000
.........................................................................................................................................................................................................................................................................TAACAATATTTTCAGCTTCGCACATC.............................................................................................................................................26100.10101000
droMoj3
GAGGAGG-----------------------GCGAATTGGTGCGTTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GTGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droAna3
TGGGTGA-----------------------GCGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGAATTAACAATATTCTCCGCCTCTATCAGGAAACTCTCCAGTAC---------------------------TGTGTGACGCAGCACCGTCTTCACGCACTGCACCATTCGCTCCCAGACTCCACGCTCTGACTGGTTCGCTGGGCAATTAAAGATCCATTCAATGCCCTTASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................AACTCTCCAGTAC---------------------------TGTGTGACGCAGC.......................................................................................2613.003120000
...............................................................................................................................................................................................................................................................................................................................................................TTCACGCACTGCACCATTCGCTCCCA.......................................................26202.705439150000
...............................................................................................................................................................................................................................................................................................................................................................TTCACGCACTGCACCATTCGCTCCC........................................................25202.505026240000
...............................................................................................................................................................................................................................................................................................................................................................TTCACGCACTGCACCATTCGCTCCCAG......................................................27201.55312290000
............................................................................................................................................................................................................................................................................................................................................................GTCTTCACGCACTGCACCATTCGCTC..........................................................2611.001100000
..........................................................................................................................................................................................................................................................................................TCTATCAGGAAACTCTCCAGTAC---------------------------TGTG................................................................................................2711.001100000
....................................................................................................................................................................................................................................................................................................AACTCTCCAGTAC---------------------------TGTGTGACGCAGCACC....................................................................................2911.001010000
................................................................................................................................................................................................................................................................................................................................................TGACGCAGCACCGTCTTCACGCACT.......................................................................2511.001010000
..........................................................................................................................................................................................................................................................................................TCTATCAGGAAACTCTCCAGTAC---------------------------TG..................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................................................................GCACTGCACCATTCGCTCCCAGACTCC.................................................27200.95191360000
...............................................................................................................................................................................................................................................................................................................................................................TTCACGCACTGCACCATTCGCTCCCAGAC....................................................29200.95191630000
...............................................................................................................................................................................................................................................................................................................................................................TTCACGCACTGCACCATTCGCTCC.........................................................24200.8517890000
...............................................................................................................................................................................................................................................................................................................................................................TTCACGCACTGCACCATTCGCTCCCAGA.....................................................28200.80161600000
....................................................................................................................................................................................................................................................................................................................................................................GCACTGCACCATTCGCTCCCAGACTC..................................................26200.60120111000
.....................................................................................................................................................................................................................................................................................................................................................................CACTGCACCATTCGCTCCCAGACTCC.................................................26200.6012930000
....................................................................................................................................................................................................................................................................................................................................................................GCACTGCACCATTCGCTCCCAGAC....................................................24200.55110110000
................................................................................................................................................................................................................................................................................................................................................................TCACGCACTGCACCATTCGCTCCCA.......................................................25200.408800000
....................................................................................................................................................................................................................................................................................................................................................................GCACTGCACCATTCGCTCCCAGACT...................................................25200.408440000
...................................................................................................................................................................................................................................................................................................................................................................CGCACTGCACCATTCGCTCCCAGACTCC.................................................28200.357520000
................................................................................................................................................................................................................................................................................................................................................................TCACGCACTGCACCATTCGCTCCCAGAC....................................................28200.357700000
...............................................................................................................................................................................................................................................................................TATTCTCCGCCTCTATCAGGAAACTCT......................................................................................................................................2730.331100000
...................................................................................................................................................................................................................................................................................................................................................................CGCACTGCACCATTCGCTCCCAGAC....................................................25200.306420000
................................................................................................................................................................................................................................................................................................................................................................TCACGCACTGCACCATTCGCTCCC........................................................24200.255230000
.............................................................................................................................................................................................................................................................................................................................................................TCTTCACGCACTGCACCATTCGCTC..........................................................25200.204220000
....................................................................................................................................................................................................................................................................................................................................................................GCACTGCACCATTCGCTCCCAGACTCCA................................................28200.204400000
...................................................................................................................................................................................................................................................................................................................................................................CGCACTGCACCATTCGCTCCCAGACT...................................................26200.204040000
...................................................................................................................................................................................................................................................................................................................................................................CGCACTGCACCATTCGCTCCCAGA.....................................................24200.204400000
................................................................................................................................................................................................................................................................................................................................................................TCACGCACTGCACCATTCGCTCCCAG......................................................26200.153300000
........................................................................................................................................................................................................................................................................................................................................................................TGCACCATTCGCTCCCAGACTCCAC...............................................25200.153120000
...................................................................................................................................................................................................................................................................................................................................................................CGCACTGCACCATTCGCTCCCAGACTC..................................................27200.153030000
........................................................................................................................................................................................................................................................................................................................................................................TGCACCATTCGCTCCCAGACTCC.................................................23200.153210000
......................................................................................................................................................................................................................................................................................................................................................................ACTGCACCATTCGCTCCCAGACTCC.................................................25200.153120000
..............................................................................................................................................................................................................................................................................................................................................................CTTCACGCACTGCACCATTCGCTCC.........................................................25200.153210000
................................................................................................................................................................................................................................................................................................................................................................TCACGCACTGCACCATTCGCTCCCAGA.....................................................27200.153201000
.....................................................................................................................................................................................................................................................................................................................................................................CACTGCACCATTCGCTCCCAGACTCCA................................................27200.153300000
.............................................................................................................................................................................................................................................................................................................................................................TCTTCACGCACTGCACCATTCGCTCC.........................................................26200.153300000
......................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAAGATCCATTCAATGCCCT..2470.141100000
...................................................................................................................................................................................................................................................................................................................................................................CGCACTGCACCATTCGCTCCCAG......................................................23200.102110000
....................................................................................................................................................................................................................................................................................................................................................................GCACTGCACCATTCGCTCCCAGACC...................................................25200.102020000
TGGGTGA-----------------------GCGGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGAATTAAC...................................................................................................................................................................23200.102200000
.................................................................................................................................................................................................................................................................................................................................................................CACGCACTGCACCATTCGCTCCCAGAC....................................................27200.102110000
..................................................................................................................................................................................................................................................................................TCTCCGCCTCTATCAGGAAACTCTCC....................................................................................................................................26200.102020000
.................................................................................................................................................................................................................................................................................TTCTCCGCCTCTATCAGGAAACTCTCCAG..................................................................................................................................29200.102200000
...............................................................................................................................................................................................................................................................................................................................................................TTCACGCACTGCACCATTCGCT...........................................................22200.102110000
....................................................................................................................................................................................................................................................................................................................................................................GCACTGCACCATTCGCTCCCAGACTCT.................................................27200.051010000
.................................................................................................................................................................................................................................................................................................................................................................CACGCACTGCACCATTCGCTCCCAGACTC..................................................29200.051100000
..................................................................................................................................................................................................................................................................................................................................................................ACGCACTGCACCATTCGCTCCCAGACTC..................................................28200.051100000
...................................................................................................................................................................................................................................................................................................................................................................CGCACTGCACCATTCGCTCCC........................................................21200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................CACTGCACCATTCGCTCCCAGACT...................................................24200.051010000
..................................................................................................................................................................................................................................................................................................................................................................ACGCACTGCACCATTCGCTCCCAGAC....................................................26200.051100000
.............................................................................................................................................................................................................................................................................................................................................................TCTTCACGCACTGCACCATTCGCTCCCAG......................................................29200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................CTGCACCATTCGCTCCCAGACTCCAC...............................................26200.051100000
.................................................................................................................................................................................................................................................................................................................................................................CACGCACTGCACCATTCGCTCCCAG......................................................25200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................CACTGCACCATTCGCTCCCAGACTCCAC...............................................28200.051100000
.................................................................................................................................................................................................................................................................................TTCTCCGCCTCTATCAGGAAACTCT......................................................................................................................................25200.051100000
................................................................................................................................................................................................................................................................................ATTCTCCGCCTCTATCAGGAAACTCTC.....................................................................................................................................27200.051100000
.........................................................................................................................................................................................................................................................................................................................................................................GCACCATTCGCTCCCAGACTC..................................................21200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................CACCATTCGCTCCCAGACTCC.................................................21200.051100000
..................................................................................................................................................................................................................................................................................TCTCCGCCTCTATCAGGAAACTCTCCA...................................................................................................................................27200.051100000
...................................................................................................................................................................................................................................................................................................................................................................CGCACTGCACCATTCGCTCCCAGACTCCA................................................29200.051100000
......................................................................................................................................................................................................................................................................................................................................................................ACTGCACCATTCGCTCCCAGACTCCAC...............................................27200.051100000
....................................................................................................................................................................................................................................................................................................................................................................GCACTGCACCATTCGCTCCCA.......................................................21200.051100000
..................................................................................................................................................................................................................................................................................................................................................................ACGCACTGCACCATTCGCTCCCAGA.....................................................25200.051010000
................................................................................................................................................................................................................................................................................................................................................................TCACGCACTGCACCATTCGCTCC.........................................................23200.051010000
....................................................................................................................................................................................................................................................................................................................................................................GCACTGCACCATTCGCTCCCAGA.....................................................23200.051010000
.................................................................................................................................................................................................................................................................................................................................................................CACGCACTGCACCATTCGCTCCC........................................................23200.051100000
....................................................................................................................................................................................................................................................................................................................................................................GCACTGCACCATTCGCTCCCAGACTCCAC...............................................29200.051100000
........................................................................................................................................................................................................................................................................................................................................................................TGCACCATTCGCTCCCAGACT...................................................21200.051100000
droBip1
GAGGAGG-----------------------GCGAGCTGGTGCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GATT-GTA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droKik1
GAGGAGG-----------------------GTGAACTGGTCCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droFic1
GAGGAGG-----------------------GCGAACTGGTCCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTACATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GAGGAGG-----------------------GTGAATTGGTCCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droRho1
CTCAGCCTTATCGATTTCCGCGACCTCCAGTAAGGGTTTCCTACTGGTTTTTCGTCTGCACAGACGGTAGACCCACGCAACGACTCGTACCAATCTTGTGAATGAGGAAAACCTTTCCAACAAATTCTTGATCTCAACATTGACGGTATCGGCTGGAACTTCCTCGCTGACAGATAGAATAAATTTGGGTGGCAGTTCCAGCTCTGTTGTGCTTACGATT-GTA-------------ATTCCCAGGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotal
No Reads
droBia1
GAGGAGG-----------------------GCGAACTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTACATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droTak1
CTCAGCCTTGTTGATTTCCGCGACCTTCAGAAAGGGTTTCCTAATGGTTTTTCGACTGCACAGACGGTAAACCCACGCCACGACTCGTACTAATCTTGTGAATGAGGAAAACCTTTCCAACCAATTCTTGATCTCAACATTGACAGTATCGGCTGGAACTTC----CTGACAGAAAGAATAAATTTGGGTCGCAGTTCCAGCTCTGTTGTGCTTATGATC-GGGTCCCCATATTGTGATTCCCAAGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTSizeHit CountTotal NormTotal
No Reads
droEug1
TTTGGCG-----------------------TTAACGGCGCCTCTTTGTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAT-CCA-------------GTGG-CATGTGGGTGAGCGGACGCGAATTGACTTTGTTTTCCGCCTCTATTAGGAGACTCTCCAAAACATGGTCCCTCGGCGCGACTTCCTTTAGGGTATGGCGCAGCACTCGCTTGACGCACTGAACCATCCGCTCCAATACTCCGCCCTCAGACGGGTTGGATGGGCAATTAAAGACCCATTCAATGCTCCTGSizeHit CountTotal NormTotal
No Reads
dm3
GAGGAGG-----------------------GAGAATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
GAGGAGG-----------------------GAGAATTGGTTCGCTGGT................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-...................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------G..................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GAGAATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-...................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GC.................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGA...............................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
................................GAATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------G..................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------G..................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GC.................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------G.......................................................................................................................................................................................................................1811.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGAATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-...................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......G-----------------------GAGAATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------G.......................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTAT...........................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GG-----------------------GAGAATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------G.......................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GG-----------------------GAGAATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GA......................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......G-----------------------GAGAATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-...................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GAATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GC.................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATTGGTTCGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-...................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GAGGAGG-----------------------GCGAATTGGTACGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGACTATATGCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................TTGGTACGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GCGAC..............................................................................................................................................................................................2711.00100010000000000000
................................GAATTGGTACGCTGGTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------GACT-GCA-------------GC.................................................................................................................................................................................................2711.00100010000000000000
droSec2
GTGCG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGCGGGCGGGAATTCACTATGTTCTCCGCTTCGATCATCAAGTTCTCCAGCACTGGCTTCTTGGGTGCAAGTTCCTTAATCGTATGCGCCAAAACCTTTTTCACGCACTGGACCATCCTTACCCAGACACCTCCCTCACCTGGGTTTGATGGGCAGTTAAAGATCCATTTGATTCCTTTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................................................CACTATGTTCTCCGCTTCGATCATC.............................................................................................................................................25114.001411030
...............................................................................................................................................................................................................................................................................................................................CAAGTTCCTTAATCGTATGCGCCA.........................................................................................24314.0042250161
..........................................................................................................................................................................................................................................................................CACTATGTTCTCCGCTTCGATCAT..............................................................................................................................................2419.0095040
..........................................................................................................................................................................................................................................................................CACTATGTTCTCCGCTTCGATCATCA............................................................................................................................................2616.0066000
...............................................................................................................................................................................................................................................................................................................................CAAGTTCCTTAATCGTATGCGCCAA........................................................................................2535.671712131
..........................................................................................................................................................................................................................................................................CACTATGTTCTCCGCTTCGATCATCAAG..........................................................................................................................................2813.0033000
...............................................................................................................................................................................................................................................................................................................................CAAGTTCCTTAATCGTATGCGCC..........................................................................................2332.3374030
................................................................................................................................................................................................................................................................................................................................AAGTTCCTTAATCGTATGCGCCAA........................................................................................2432.0066000
................................................................................................................................................................................................................................................................................................................................AAGTTCCTTAATCGTATGCGCCAAAACC....................................................................................2831.6753020
............................................................................................................................................................................................................................................................................................................................................................TTTTTCACGCACTGGACCATCCTTACCC........................................................2831.6755000
................................................................................................................................................................................................................................................................................................................................AAGTTCCTTAATCGTATGCGCCA.........................................................................................2331.6754010
...............................................................................................................................................................................................................................................................................................................................CAAGTTCCTTAATCGTATGCGCCAAA.......................................................................................2631.3342011
..............................................................................................................................................................................................................................................................................................................................................................TTTCACGCACTGGACCATCCTTACCC........................................................2631.0033000
..........................................................................................................................................................................................................................................................................CACTATGTTCTCCGCTTCGATCATCAA...........................................................................................................................................2711.0011000
................................................................................................................................................................................................................................................................................................................................AAGTTCCTTAATCGTATGCGCCAAAA......................................................................................2631.0033000
...........................................................................................................................................................................................................................................................................ACTATGTTCTCCGCTTCGATCATCAAG..........................................................................................................................................2711.0010010
.........................................................................................................................................................................................................................................................................................................TCCAGCACTGGCTTCTTGGGTGCAAGT............................................................................................................2711.0011000
..........................................................................................................................................................................................................................................................................CACTATGTTCTCCGCTTCGATCA...............................................................................................................................................2311.0010010
...................................................................................................................................................................................................................................................................................................................................TTCCTTAATCGTATGCGCCAAAACC....................................................................................2530.6721010
....................................................................................................................................................................................................................................................................................................................................TCCTTAATCGTATGCGCCAAAACCTT..................................................................................2630.6722000
...............................................................................................................................................................................................................................................................................................................................CAAGTTCCTTAATCGTATGCGCCAAAA......................................................................................2730.6722000
................................................................................................................................................................................................................................................................................................................................AAGTTCCTTAATCGTATGCGCC..........................................................................................2230.3311000
.............................................................................................................................................................................................................................................................................................................................................................TTTTCACGCACTGGACCATCCT.............................................................2230.3311000
................................................................................................................................................................................................................................................................................................................................AAGTTCCTTAATCGTATGCGCCAAAAA.....................................................................................2730.3311000
..............................................................................................................................................................................................................................................................................................................................................................TTTCACGCACTGGACCATCCTTACCCA.......................................................2730.3311000
...........................................................................................................................................................................................................................................................................................................................................................CTTTTTCACGCACTGGACCATCCT.............................................................2430.3311000
...............................................................................................................................................................................................................................................................................................................................CAAGTTCCTTAATCGTATGC.............................................................................................2030.3311000
.........................................................................................................................................................................................................................................................................................................................................................ACCTTTTTCACGCACTGGACCATCCTTG...........................................................2830.3311000
.........................................................................................................................................................................................................................................................................................................................................................ACCTTTTTCACGCACTGGACCATCC..............................................................2530.3311000
..........................................................................................................................................................................................................................................................................................................................................................CCTTTTTCACGCACTGGACCATCC..............................................................2430.3311000
.........................................................................................................................................................................................................................................................................................................................................................ACCTTTTTCACGCACTGGACCATCCTTAC..........................................................2930.3311000
.............................................................................................................................................................................................................................................................................................................................................................TTTTCACGCACTGGACCATCCTTACC.........................................................2630.3311000
........................................................................................................................................................................................................................................................................................................................................................AACCTTTTTCACGCACTGGACCATCCT.............................................................2730.3311000
................................................................................................................................................................................................................................................................................................................................................................TCACGCACTGGACCATCCTTACCCAGA.....................................................2730.3310010
............................................................................................................................................................................................................................................................................................................................................................TTTTTCACGCACTGGACCATCCT.............................................................2330.3310010
........................................................................................................................................................................................................................................................................................................................................................AACCTTTTTCACGCACTGGACCATC...............................................................2530.3311000
............................................................................................................................................................................................................................................................................................................................................................TTTTTCACGCACTGGACCATCCTTACCCA.......................................................2930.3311000
...................................................................................................................................................................................................................................................................................................................................................................CGCACTGGACCATCCTTACCCAGACAC..................................................2730.3311000
...............................................................................................................................................................................................................................................................................................................................CAAGTTCCTTAATCGTATGCGCCAAAACC....................................................................................2930.3311000
............................................................................................................................................................................................................................................................................................................................................................TTTTTCACGCACTGGACCATCCTTA...........................................................2530.3311000
.................................................................................................................................................................................................................................................................................................................................AGTTCCTTAATCGTATGCGCCAAAACC....................................................................................2730.3311000
............................................................................................................................................................................................................................................................................................................................................................................CCATCCTTACCCAGACACCTCCCTCAC.........................................2730.3311000
.............................................................................................................................................................................................................................................................................................................................................................TTTTCACGCACTGGACCATCCTTACCC........................................................2730.3311000
...............................................................................................................................................................................................................................................................................................................................CAAGTTCCTTAATCGTATGCGC...........................................................................................2230.3311000
........................................................................................................................................................................................................................................................................................................................................................................................AGACACCTCCCTCACCTGGGTTTGA...............................2540.2511000
...............................................................................................................................................................................................................................................................................................................................................................................................TCCCTCACCTGGGTTTGATGGGCAGT.......................2640.2511000
.......................................................................................................................................................................................................................................................................................................................................................................................CAGACACCTCCCTCACCTGGGTTTGA...............................2640.2511000
...................................................................................................................................................................................................................................................................................................................................................................................................TCACCTGGGTTTGATGGGCAGTTAAAG..................2740.2511000
.................................................................................................................................................................................................................................................................................................................................................................................................CCTCACCTGGGTTTGATGGGCAGTTAA....................2740.2510010
...............................................................................................................................................................................................................................................................................................................................CAAGTTCCTTAATCGTAAA..............................................................................................1940.2510010
.........................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGATCCATTTGATTCCTT..2140.2511000
..................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAGTTAAAGATCCATTTGATTCC....2640.2511000
...........................................................................................................................................................................................................................................................................................................................................................................................CACCTCCCTCACCTGGGTTTGATGGG...........................2640.2511000

Generated: 05/18/2015 at 04:04 AM