ID:

dps_230

 Coordinate:

Unknown_singleton_177:203-254 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

ultra_scaffold [Unknown_singleton_177]

Repeatable elements

NameClassFamilyStrand
BilboLINELOA-
mature
  1. Unknown_group_111:1027-1051 +
  2. dps_230  Unknown_singleton_177:229-253 +
  3. Unknown_singleton_3935:1332-1356 +
star
  1. dps_230  Unknown_singleton_177:203-224 +
  2. Unknown_singleton_3935:1306-1327 +

Sense Strand Reads

ATTTGAAGGATCCTTAGGACCATCTTCAAGATTCTCCACCACCGTGATGCCCGCGTCCGAGTCATCTGAGACTCTCTCTCGGCACATTGACTCGAAGTCGAGCATCAGTTCTGTGTCTGAGGAGAAGCCTTCCTGGTCTGGCTCCAGCTCGT
***********************************.(((.....((((((.((....(((((((.((((((.....)))))).....)))))))....)).)))))).....))).************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 SRR902011
testis
 M022
male body		 GSM343916
embryo
 V112
male body		 M062
head
 GSM444067
head
............................................................................TCTCGGCACATTGACTCGAAGTCGA................................................... 25 0 3 1163.67 3491 3363 30 77 7 9 2 2 0 1
............................................................................TCTCGGCACATTGACTCGAAGTCG.................................................... 24 0 3 741.00 2223 2166 18 14 4 6 4 11 0 0
............................................................................TCTCGGCACATTGACTCGAAGTC..................................................... 23 0 3 563.33 1690 1627 16 36 0 9 0 1 1 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAG.................................................. 26 0 3 130.00 390 371 9 6 0 0 4 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAGC................................................. 27 0 3 120.67 362 282 60 11 8 0 0 0 1 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAGCA................................................ 28 0 3 116.33 349 335 7 4 3 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGT...................................................... 22 0 3 83.67 251 235 8 3 0 3 1 1 0 0
.............................................................................CTCGGCACATTGACTCGAAGTCGA................................................... 24 0 4 81.00 324 324 0 0 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAGTCG.................................................... 23 0 4 55.50 222 222 0 0 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAGTC..................................................... 22 0 4 44.75 179 179 0 0 0 0 0 0 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGCTCGT 22 0 8 33.13 265 253 3 2 3 0 2 2 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGAAGC........................ 24 1 1 24.00 24 12 3 9 0 0 0 0 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGCTCG. 21 0 8 22.25 178 175 1 0 0 0 2 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGAAGCCT...................... 26 1 1 20.00 20 16 0 4 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGT................................................... 25 1 3 18.33 55 51 2 1 0 0 0 1 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCT.................................................... 24 1 3 18.00 54 47 0 4 0 1 2 0 0 0
..............................................................................TCGGCACATTGACTCGAAGTCGAGCA................................................ 26 0 4 15.25 61 39 19 2 0 1 0 0 0 0
..................................................................................CACATTGACTCGAAGTCGAGCA................................................ 22 0 4 14.00 56 54 1 0 1 0 0 0 0 0
..............................................................................TCGGCACATTGACTCGAAGTCGAGCAT............................................... 27 0 4 11.75 47 11 36 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTAACTCGAAGTCGA................................................... 25 1 3 11.67 35 31 4 0 0 0 0 0 0 0
..........................................................................TCTCTCGGCACATTGACTCGAAG....................................................... 23 0 3 11.00 33 30 2 1 0 0 0 0 0 0
.............................................................TCATCTGAGACTCTCTCTCGGCACAT................................................................. 26 0 2 11.00 22 17 5 0 0 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGAAG......................... 23 1 1 11.00 11 11 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAA.................................................. 26 1 3 10.33 31 29 0 1 0 0 1 0 0 0
...........................................................................CTCTCGGCACATTGACTCGAAGTCG.................................................... 25 0 3 10.00 30 26 3 1 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAGTCGAGCA................................................ 27 0 4 9.75 39 39 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAAGTCGAGCATCAGT........................................... 27 0 4 9.25 37 22 12 1 2 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAG....................................................... 21 0 3 9.00 27 26 1 0 0 0 0 0 0 0
..........................................................................TCTCTCGGCACATTGACTCGAAGT...................................................... 24 0 3 8.67 26 24 0 1 0 0 1 0 0 0
..............................................................................TCGGCACATTGACTCGAAGTCGAGC................................................. 25 0 4 8.50 34 13 12 3 3 0 3 0 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGCTC.. 20 0 8 7.38 59 54 0 3 0 0 2 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAGCAT............................................... 29 0 3 7.33 22 4 12 0 5 0 0 1 0 0
.............................................................................CTCGGCACATTGACTCGAAGTCGAG.................................................. 25 0 4 7.25 29 29 0 0 0 0 0 0 0 0
........................................................................TCTCTCTCGGCACATTGACTCGAAG....................................................... 25 0 3 6.33 19 15 2 1 0 0 1 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCTC................................................... 25 2 3 6.33 19 19 0 0 0 0 0 0 0 0
...............................................................................CGGCACATTGACTCGAAGTCGAGCAT............................................... 26 0 4 6.25 25 1 22 0 2 0 0 0 0 0
.................................................................................................TCGAGCATCAGTTCAGTGTCTGAGG.............................. 25 1 1 6.00 6 4 1 0 0 0 1 0 0 0
..........................................................................TCTCTCGGCACATTGACTCGAAGTC..................................................... 25 0 3 6.00 18 17 0 1 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAGT...................................................... 21 0 4 6.00 24 24 0 0 0 0 0 0 0 0
..............................................................................TCGGCACATTGACTCGAAGTCGA................................................... 23 0 4 5.75 23 22 0 0 1 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAGTCGAGC................................................. 26 0 4 5.50 22 22 0 0 0 0 0 0 0 0
.............................................................TCATCTGAGACTCTCTCTCGGCAC................................................................... 24 0 2 5.50 11 10 0 1 0 0 0 0 0 0
..........................................................................TCTCTCGGCACATTGACTCGAAGTCG.................................................... 26 0 3 5.33 16 16 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTAACTCGAAGTCG.................................................... 24 1 3 4.67 14 13 0 0 0 0 0 1 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGCT... 19 0 8 4.25 34 32 0 1 0 0 1 0 0 0
..................................................................................CACATTGACTCGAAGTCGAGCAT............................................... 23 0 4 4.25 17 13 4 0 0 0 0 0 0 0
..................................................................TGAGACTCTCTCTCGGCACATTGACTC........................................................... 27 0 5 4.20 21 16 4 0 0 0 0 0 1 0
.TTTGAAGGATCCTTAGGACCATCT............................................................................................................................... 24 0 10 4.20 42 23 16 1 0 0 2 0 0 0
.........................................................................................................CAGTTCAGTGTCTGAGGAGAA.......................... 21 1 1 4.00 4 4 0 0 0 0 0 0 0 0
.........................TCAAGATTCTCCACCACCGTGATG....................................................................................................... 24 0 8 4.00 32 32 0 0 0 0 0 0 0 0
.............................................................................................................TCAGTGTCTGAGGAGAAGCCT...................... 21 1 1 4.00 4 3 0 1 0 0 0 0 0 0
..............................................................................TCGGCACATTGACTCGAAGTCG.................................................... 22 0 4 3.75 15 15 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAAGTCGAGCATCAG............................................ 26 0 4 3.75 15 10 5 0 0 0 0 0 0 0
...............................................................................CGGCACATTGACTCGAAGTCGAGC................................................. 24 0 4 3.50 14 1 11 0 2 0 0 0 0 0
...........................................................................CTCTCGGCACATTGACTCGAAGTCGA................................................... 26 0 3 3.33 10 10 0 0 0 0 0 0 0 0
..........................................................................TCTCTCGGCACATTGACTCGAAGTCGA................................................... 27 0 3 3.33 10 10 0 0 0 0 0 0 0 0
...................................................................................................................................CCTGGTCTGGCTCCAGCTCGT 21 0 8 3.25 26 26 0 0 0 0 0 0 0 0
...............................................................................CGGCACATTGACTCGAAGTCGAGCA................................................ 25 0 4 3.25 13 9 1 1 0 0 1 1 0 0
..................................................................TGAGACTCTCTCTCGGCACATTGACT............................................................ 26 0 5 3.20 16 15 1 0 0 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGAAGCCTA..................... 27 2 1 3.00 3 0 3 0 0 0 0 0 0 0
........................................................................................................TCAGTTCTGTGTCTGAGGAGAAGCCT...................... 26 0 1 3.00 3 0 0 1 1 1 0 0 0 0
........................................................................................................TCAGTTCTGTGTCTGAGGAGAAGC........................ 24 0 1 3.00 3 1 0 0 2 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGAA.......................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTAACTCGAAGTC..................................................... 23 1 3 3.00 9 6 2 0 0 0 0 0 1 0
............................................................................TGTCGGCACATTGACTCGAAGTCGA................................................... 25 1 3 3.00 9 0 0 9 0 0 0 0 0 0
.................................................................................................TCGAGCATCAGTTCAGTGTCTGAGGA............................. 26 1 1 3.00 3 3 0 0 0 0 0 0 0 0
.........................................................................CTCTCTCGGCACATTGACTCGAAG....................................................... 24 0 3 3.00 9 9 0 0 0 0 0 0 0 0
.........................................................................................................CAGTTCTGTGTCTGAGGAGAAGC........................ 23 0 1 3.00 3 0 1 0 2 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGAAGCC....................... 25 1 1 3.00 3 1 0 2 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAGA................................................. 27 1 5 3.00 15 15 0 0 0 0 0 0 0 0
..............................................................................TCGGCACATTGACTCGAAGTCGAG.................................................. 24 0 4 2.75 11 11 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAAGTCGAGCATCA............................................. 25 0 4 2.75 11 3 6 0 2 0 0 0 0 0
........................TTCAAGATTCTCCACCACCGTGA......................................................................................................... 23 0 7 2.71 19 17 2 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTAACTCGAAGTCGAGCA................................................ 28 1 3 2.67 8 6 2 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGA......................................................... 19 0 3 2.67 8 8 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCG.......................................................... 18 0 3 2.67 8 1 5 0 2 0 0 0 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGCTA.. 20 1 8 2.63 21 21 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAAGTCGAGC................................................. 21 0 4 2.50 10 10 0 0 0 0 0 0 0 0
.............................................................TCATCTGAGACTCTCTCTCGGCA.................................................................... 23 0 2 2.50 5 5 0 0 0 0 0 0 0 0
.........................TCAAGATTCTCCACCACCGTGA......................................................................................................... 22 0 8 2.38 19 19 0 0 0 0 0 0 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGCTCGA 22 1 8 2.38 19 16 2 1 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCTCGC................................................. 27 2 3 2.33 7 7 0 0 0 0 0 0 0 0
............................................................................TCTTGGCACATTGACTCGAAGTCGA................................................... 25 1 3 2.33 7 1 1 3 0 0 0 0 2 0
...........................................................................CTCTCGGCACATTGACTCGAAG....................................................... 22 0 3 2.33 7 7 0 0 0 0 0 0 0 0
......................TCTTCAAGATTCTCCACCACCGTGA......................................................................................................... 25 0 7 2.29 16 16 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAAGTCGAGCATC.............................................. 24 0 4 2.25 9 6 1 0 2 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAGTCGT................................................... 24 1 4 2.25 9 9 0 0 0 0 0 0 0 0
.TTTGAAGGACCCTTAGGACCATCT............................................................................................................................... 24 1 10 2.10 21 14 6 0 1 0 0 0 0 0
.........................................................................................................CAGTTCAGTGTCTGAGGAGAAG......................... 22 1 1 2.00 2 2 0 0 0 0 0 0 0 0
..............................................................................TCGGCACATTGACTCGAAGTC..................................................... 21 0 4 2.00 8 8 0 0 0 0 0 0 0 0
.............................................................................................................TCAGTGTCTGAGGAGAAGCCTTCCTG................. 26 1 1 2.00 2 1 1 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCTCGCA................................................ 28 2 3 2.00 6 6 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAAGTCTCGCATCAG............................................ 26 2 4 2.00 8 2 4 0 2 0 0 0 0 0
...........................................................................CTCTCGGCACATTGACTCGAAGTC..................................................... 24 0 3 2.00 6 5 0 1 0 0 0 0 0 0
..............................................................CATCTGAGACTCTCTCTCGGCAC................................................................... 23 0 2 2.00 4 4 0 0 0 0 0 0 0 0
.........................TCAAGATTCTCCACCACCGTGATGCC..................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAG............................ 20 1 1 2.00 2 2 0 0 0 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGA........................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0
...................................................................................................GAGCATCAGTTCAGTGTCTGAGGA............................. 24 1 1 2.00 2 2 0 0 0 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGAAGCA....................... 25 2 1 2.00 2 2 0 0 0 0 0 0 0 0
.............................................................................................................TCAGTGTCTGAGGAGAAGC........................ 19 1 1 2.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................................CAGTTCAGTGTCTGAGGAGAAGC........................ 23 1 1 2.00 2 2 0 0 0 0 0 0 0 0
..............................................................CATCTGAGACTCTCTCTCGGCACAT................................................................. 25 0 2 2.00 4 4 0 0 0 0 0 0 0 0
.................................................................................GCACATTGACTCGAAGTCGAGCA................................................ 23 0 4 2.00 8 7 1 0 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAGTCT.................................................... 23 1 4 2.00 8 8 0 0 0 0 0 0 0 0
..................................................................................................................GTCTGAGGAGAAGCCTTCCTGGTC.............. 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.TTTGAAGGATCCTTAGGACCATC................................................................................................................................ 23 0 10 1.90 19 7 11 0 1 0 0 0 0 0
..................................................................TGAGACTCTCTCTCGGCACATTGAC............................................................. 25 0 5 1.80 9 8 0 1 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAAA................................................. 27 2 5 1.80 9 8 0 1 0 0 0 0 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGC.... 18 0 8 1.75 14 6 7 1 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAT.................................................. 26 1 4 1.75 7 6 0 0 0 0 1 0 0 0
..........TCCTTAGGACCATCTTCAAGATTC...................................................................................................................... 24 0 8 1.75 14 12 0 2 0 0 0 0 0 0
........................................................................TCTCTCTCGGCACATTGACTCGAAGTC..................................................... 27 0 3 1.67 5 3 0 2 0 0 0 0 0 0
.......................................................................CTCTCTCTCGGCACATTGACTCGAAG....................................................... 26 0 3 1.67 5 3 2 0 0 0 0 0 0 0
........................TTCAAGATTCTCCACCACCGTGATG....................................................................................................... 25 0 7 1.57 11 10 0 0 0 0 1 0 0 0
...................................................................................................................................CCTGGTCTGGCTCCAGCTCG. 20 0 8 1.50 12 12 0 0 0 0 0 0 0 0
...........................................................................TTCTCGGCACATTGACTCGAAGTCGA................................................... 26 1 4 1.50 6 6 0 0 0 0 0 0 0 0
.............................................................TCATCTGAGACTCTCTCTCGGCACA.................................................................. 25 0 2 1.50 3 2 1 0 0 0 0 0 0 0
.TTTGAAGGATCCTTAGGACCATCTTCAA........................................................................................................................... 28 0 10 1.50 15 3 11 0 1 0 0 0 0 0
...................................................CGCGTCCGAGTCATCTGAGACTCTCTC.......................................................................... 27 0 2 1.50 3 3 0 0 0 0 0 0 0 0
.......................................................TCCGAGTCATCTGAGACTCTCTCTCG....................................................................... 26 0 2 1.50 3 3 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAAGTCTCGCATCAGT........................................... 27 2 4 1.50 6 0 6 0 0 0 0 0 0 0
..................................................................TGAGACTCTCTCTCGGCACATTGA.............................................................. 24 0 5 1.40 7 4 3 0 0 0 0 0 0 0
..........................CAAGATTCTCCACCACCGTGATG....................................................................................................... 23 0 8 1.38 11 10 0 0 1 0 0 0 0 0
.........................................................................CTCTCTCGGCACATTGACTCGAAGTC..................................................... 26 0 3 1.33 4 4 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAGGTCGA................................................... 25 1 3 1.33 4 4 0 0 0 0 0 0 0 0
...........................................................................ATCTCGGCACATTGACTCGAAGTCGA................................................... 26 1 3 1.33 4 4 0 0 0 0 0 0 0 0
............................................................................TCCCGGCACATTGACTCGAAGTCGA................................................... 25 1 3 1.33 4 1 0 3 0 0 0 0 0 0
...........................................................................CTCTCGGCACATTGACTCGAAGTCGAG.................................................. 27 0 3 1.33 4 4 0 0 0 0 0 0 0 0
...........................................................................CTCTCGGCACATTGACTCGAAGT...................................................... 23 0 3 1.33 4 4 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGG................................................... 25 1 3 1.33 4 4 0 0 0 0 0 0 0 0
...............................................................................CGGCACATTGACTCGAAGTCGAGCATC.............................................. 27 0 4 1.25 5 0 5 0 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAG....................................................... 20 0 4 1.25 5 5 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAAGTCGAG.................................................. 20 0 4 1.25 5 4 0 1 0 0 0 0 0 0
...............................................................................CGGCACATTGACTCGAAGTCG.................................................... 21 0 4 1.25 5 5 0 0 0 0 0 0 0 0
.....................................................................................................................TGAGGAGAAGCCTTCCTGGTCTGGC.......... 25 0 6 1.17 7 6 0 1 0 0 0 0 0 0
..........TCCTTAGGACCATCTTCAAGATTCT..................................................................................................................... 25 0 8 1.13 9 9 0 0 0 0 0 0 0 0
.....................................................................................................GCATCAGTTCAGTGTCTGAGGAGAAGCC....................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAGT................................................. 27 1 3 1.00 3 0 2 0 0 0 1 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCA.................................................... 24 1 3 1.00 3 3 0 0 0 0 0 0 0 0
..........................................................................................................AGTTCTGTGTCTGAGGAG............................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................GCGTCCGAGACATCTGAGACTCTC............................................................................ 24 1 2 1.00 2 1 0 1 0 0 0 0 0 0
............................................................................TCTCGGCACATCGACTCGAAGTCGA................................................... 25 1 4 1.00 4 4 0 0 0 0 0 0 0 0
.............................................................................................................TCAGTGTCTGAGGAGAAGCCTTCC................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................GTCAGTTCAGTGTCTGAGGAGAAG......................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0
..............................................................................TCGGCACATTGACTCGAAG....................................................... 19 0 4 1.00 4 4 0 0 0 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGAAGCCC...................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCTCGCAT............................................... 29 2 3 1.00 3 3 0 0 0 0 0 0 0 0
.........................................................................................................CAGTTCAGTGTCTGAGGAGA........................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................TGTCTGAGGAGAAGCCTTCCTGGTC.............. 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...........................................................AGTCATCTGAGACTCTCTCTCGGCAC................................................................... 26 0 2 1.00 2 2 0 0 0 0 0 0 0 0
...........................................................................ATCTCGGCACATTGACTCGAAGTCG.................................................... 25 1 3 1.00 3 3 0 0 0 0 0 0 0 0
.............................................................................................................TCAGTGTCTGAGGAGAAGCCTTC.................... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TCAGTGTCTGAGGAGAAACCTTCC................... 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................CCGCGTCCGAGTCATCTGAGACT............................................................................... 23 0 2 1.00 2 2 0 0 0 0 0 0 0 0
.............................................................TCATCTGAGACTCTCTCTCGGCACT.................................................................. 25 1 2 1.00 2 2 0 0 0 0 0 0 0 0
.........................................................................................................CAGTTCTGTGTCTGAGGAGAAG......................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGA............................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................TCAGTGTCTGAGGAGAAGCC....................... 20 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................................................................................TGTCTGAGGAGAAGCCTTCCTG................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................CAAGATTCTCCACCACCGTGATGCC..................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................TCTCGACACATTGACTCGAAGTCGA................................................... 25 1 3 1.00 3 3 0 0 0 0 0 0 0 0
.....................................................................................................GCATCAGTTCAGTGTCTGAGGAGAAGC........................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.........................................................................................................CAGTTCTGTGTCTGAGGAGAAGCC....................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGAAGACT...................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................................TCATCTGAGACTCTCTCTCG....................................................................... 20 0 2 1.00 2 2 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCTCG.................................................. 26 2 3 1.00 3 3 0 0 0 0 0 0 0 0
...............................................................................CGGCACATTGACTCGAAGTCGA................................................... 22 0 4 1.00 4 4 0 0 0 0 0 0 0 0
.........................................................................................................CAGTTCAGTGTCTGAGGAGAAGCCT...................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................TGAGTTCAGTGTCTGAGGAGAAGC........................ 24 2 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAAAA.......................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................TCAGTTCTGTGTCTGAGGAGAAG......................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.......................................CACCGTGATGCCCGCGTCCGAGT.......................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................CGCGTCCGAGTCATCTGAGACTCT............................................................................. 24 0 2 1.00 2 2 0 0 0 0 0 0 0 0
.............................................................................................................TCTGTGTCTGAGGAGAAGCCT...................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................AGCATCAGTTCAGTGTCTGAGGAG............................ 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAC.................................................. 26 1 3 1.00 3 2 0 1 0 0 0 0 0 0
..................................................................................................................GTCTGAGGAGAAGCCTTCCTGGTCT............. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................TCAGTTCAGTGTCTGAGGAGAAA......................... 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................TCTCAGCACATTGACTCGAAGTCG.................................................... 24 1 3 1.00 3 2 0 1 0 0 0 0 0 0
...............................................................................................................TGTGTCTGAGGAGAAGCCTTCCTGGTC.............. 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0
.........................................................................................................CAGTTCAGTGTCTGAGGAGAAGCC....................... 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................CGCGTCCGAGTCATCTGAGACTC.............................................................................. 23 0 2 1.00 2 2 0 0 0 0 0 0 0 0
..........................................................GAGTCATCTGAGACTCTCTCTCGGCA.................................................................... 26 0 2 1.00 2 2 0 0 0 0 0 0 0 0
.......................................................TCCGAGTCATCTGAGACTCTCTCTC........................................................................ 25 0 2 1.00 2 2 0 0 0 0 0 0 0 0
..............................................................................................................CTGTGTCTGAGGAGAAGCCTT..................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAGCT................................................ 28 1 3 1.00 3 3 0 0 0 0 0 0 0 0
..................................................CCGCGTCCGAGTCATCTGAGACTCTC............................................................................ 26 0 2 1.00 2 2 0 0 0 0 0 0 0 0
.................................................................................................TCGAGCATCAGTTCAGTGTCTGAGGAG............................ 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................CGAGCATCAGTTCAGTGTCTGAGGA............................. 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................TCGAGCATCAGTTCAGTGTC................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................CACCGTGATGCCCGCGTCCGAGTC......................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................TTCAGTGTCTGAGGAGAAGCAA...................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................TCTCTCTCGGCACATTGACTCGAAGT...................................................... 26 0 3 1.00 3 2 0 1 0 0 0 0 0 0
.............................................................................................................TCAGTGTCTGAGGAGAAG......................... 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................CAGTGTCTGAGGAGAAGC........................ 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0
..............TAGGACCATCTTCAAGATTCTCCACC................................................................................................................ 26 0 8 0.88 7 6 0 1 0 0 0 0 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGCTTG. 21 1 8 0.88 7 7 0 0 0 0 0 0 0 0
...................................................................................................................TCTGAGGAGAAGCCTTCCTGGTCT............. 24 0 6 0.83 5 3 0 2 0 0 0 0 0 0
.....................................................................................................................TGAGGAGAAGCCTTCCTGGTCTG............ 23 0 6 0.83 5 4 1 0 0 0 0 0 0 0
.................................................................................................................................TTCCTGGTCTGGCTCCAGCTCG. 22 0 8 0.75 6 6 0 0 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAGTCGAA.................................................. 25 1 4 0.75 3 3 0 0 0 0 0 0 0 0
..............................................................................TCGGCACATTGACTCGAAGT...................................................... 20 0 4 0.75 3 3 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAAGTCGAGCATCAA............................................ 26 1 4 0.75 3 2 0 0 1 0 0 0 0 0
.................................................................................ACACATTGACTCGAAGTCGAGCATCAA............................................ 27 2 4 0.75 3 0 3 0 0 0 0 0 0 0
...........................................................................TTCTCGGCACATTGACTCGAAGTC..................................................... 24 1 4 0.75 3 3 0 0 0 0 0 0 0 0
.................................................................................GCACATTGACTCGAAGTCGAGC................................................. 22 0 4 0.75 3 1 2 0 0 0 0 0 0 0
...................................................................................ACATTGACTCGAAGTCGAGCA................................................ 21 0 4 0.75 3 3 0 0 0 0 0 0 0 0
.................................................................................GCACATTGACTCGAAGTCGAGCAT............................................... 24 0 4 0.75 3 0 3 0 0 0 0 0 0 0
.TTTGAAGGATCCTTAGGACCATCTT.............................................................................................................................. 25 0 10 0.70 7 6 1 0 0 0 0 0 0 0
..TTGAAGGATCCTTAGGACCATCT............................................................................................................................... 23 0 10 0.70 7 7 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCC.................................................... 24 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGACGA................................................... 25 1 3 0.67 2 1 0 1 0 0 0 0 0 0
...........................................................................CTCTCGGCACATTGACTCGAAGTCGT................................................... 26 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGCC..................................................... 23 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTAG.................................................... 24 1 3 0.67 2 2 0 0 0 0 0 0 0 0
...............................................................ATCTGAGACTCTCTCTCGGCAC................................................................... 22 0 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAGCATTGA............................................ 32 3 3 0.67 2 0 2 0 0 0 0 0 0 0
............................................................................TCTCGGCACTTTGACTCGAAGTCG.................................................... 24 1 3 0.67 2 2 0 0 0 0 0 0 0 0
..........................................................................TCTCTCGGCACATTGACTCGTT........................................................ 22 2 3 0.67 2 0 0 0 2 0 0 0 0 0
...................................................................................................................TCTGAGGAGAAGCCTTCCTG................. 20 0 6 0.67 4 4 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGTA.................................................. 26 2 3 0.67 2 2 0 0 0 0 0 0 0 0
...........................................................................GTCTCGGCACATTGACTCGAAGTCGA................................................... 26 1 3 0.67 2 2 0 0 0 0 0 0 0 0
..........................................................................TCTCTCGGCACATTGACTCGAAGTCGAG.................................................. 28 0 3 0.67 2 2 0 0 0 0 0 0 0 0
...................................................................................................................TCTGAGGAGAAGCCTTCCTGGTC.............. 23 0 6 0.67 4 3 0 0 0 0 1 0 0 0
............................................................................TCTCGGCACATTGACTCGAGGTCGAGCA................................................ 28 1 3 0.67 2 2 0 0 0 0 0 0 0 0
...........................................................................CTCTCGGCACATTGACTCGAAGTCGAGCA................................................ 29 0 3 0.67 2 2 0 0 0 0 0 0 0 0
..........................................................................TCTCTCGGCACATTGACTCGA......................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0 0 0
..........................................................................TCTCTCGGCACATTGACTCGAAGTCGT................................................... 27 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTAACTCGAAGTCGAG.................................................. 26 1 3 0.67 2 2 0 0 0 0 0 0 0 0
.............................................................................................................TCAGTGTCTGAGGAGAAGA........................ 19 2 3 0.67 2 0 2 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGGCTCGAAGTCGA................................................... 25 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCTA................................................... 25 1 3 0.67 2 1 1 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTTACTCGAAGTCG.................................................... 24 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAGGTC..................................................... 23 1 3 0.67 2 2 0 0 0 0 0 0 0 0
..........................................................................AGTCTCGGCACATTGACTCGAAGTCGA................................................... 27 2 3 0.67 2 2 0 0 0 0 0 0 0 0
.........................................................................TAATCTCGGCACATTGACTCGAAGTCGAGC................................................. 30 3 3 0.67 2 0 2 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAA........................................................ 20 0 3 0.67 2 2 0 0 0 0 0 0 0 0
...........................................................................ATCTCGGCACATTGACTCGAAGTC..................................................... 24 1 3 0.67 2 2 0 0 0 0 0 0 0 0
..........................................................................ACTCTCGGCACATTGACTCGAAGTCG.................................................... 26 1 3 0.67 2 2 0 0 0 0 0 0 0 0
............................................................................TCTCGGCGCATTGACTCGAAGTC..................................................... 23 1 3 0.67 2 2 0 0 0 0 0 0 0 0
...........................................................................ATCTCGGCACATTGACTCGAAGTCGAG.................................................. 27 1 3 0.67 2 2 0 0 0 0 0 0 0 0
.........................................................................CTCTCTCGGCACATTGACTCGAAGTCGAGC................................................. 30 0 3 0.67 2 0 2 0 0 0 0 0 0 0
...........................................................................GTCTCGGCACATTGACTCGAAGTCG.................................................... 25 1 3 0.67 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................CCTGGTCTGGCTCCAGCTC.. 19 0 8 0.63 5 5 0 0 0 0 0 0 0 0
..........................CAAGATTCTCCACCACCGTGA......................................................................................................... 21 0 8 0.63 5 5 0 0 0 0 0 0 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGCTCT. 21 1 8 0.63 5 4 1 0 0 0 0 0 0 0
.................................................................................................................................TTCCTGGTCTGGCTCCAGCTC.. 21 0 8 0.63 5 4 0 1 0 0 0 0 0 0
..................................................................TGAGACTCTCTCTCGGCACATTG............................................................... 23 0 5 0.60 3 3 0 0 0 0 0 0 0 0
.TTTGAAGGATCGTTAGGACCATCT............................................................................................................................... 24 1 10 0.60 6 1 3 0 2 0 0 0 0 0
................................................................TCTGAGACTCTCTCTCGGCACATTGACTC........................................................... 29 0 5 0.60 3 2 0 1 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGAAAA................................................ 28 2 5 0.60 3 3 0 0 0 0 0 0 0 0
.TTTGAAGGATCCTTAGGACC................................................................................................................................... 20 0 11 0.55 6 4 2 0 0 0 0 0 0 0
..................................................................................CGCATTGACTCGAAGTCGAGCA................................................ 22 1 4 0.50 2 2 0 0 0 0 0 0 0 0
..........................................................GAGTCATCTGAGACTCTCTCTCGG...................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................................TGACTCGAAGTCGAGCATCAGTTCAGT...................................... 27 1 4 0.50 2 2 0 0 0 0 0 0 0 0
.............................................................TCATCTGGGACTCTCTCTCGGCAC................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................GGCACATTGACTCGAAGTCGA................................................... 21 0 4 0.50 2 2 0 0 0 0 0 0 0 0
.............................................................TCATCTGAGACTCTCTCTCGGC..................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.......................................................................................TGACTCGAAGTCGAGCATCAGT........................................... 22 0 4 0.50 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGCTAA. 21 2 8 0.50 4 4 0 0 0 0 0 0 0 0
....................................................GCGTCCGAGTCATCTGAGACTCTCT........................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................TAATCTGAGACTCTCTCTCGGCAC................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0
ATTTGAAGGATCCTTAGGACCATCT............................................................................................................................... 25 0 10 0.50 5 5 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATTGACTCGAAGTCGTT.................................................. 26 2 4 0.50 2 2 0 0 0 0 0 0 0 0
.....................................................CGTCCGAGTCATCTGAGACTCTC............................................................................ 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................CGCGTCCGAGACATCTGAGACTCTC............................................................................ 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................TCATCTGAGACTCTCTCTCGGCAA................................................................... 24 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................CCGCGTCCGAGTCATCTGAGAC................................................................................ 22 0 2 0.50 1 0 0 1 0 0 0 0 0 0
...............................................................................CGGCACATTGACTCGAAGTC..................................................... 20 0 4 0.50 2 2 0 0 0 0 0 0 0 0
..................................................CCGCGTCCGAGACATCTGAGACTCT............................................................................. 25 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................TCGGCACATTGACTCGAAGTCGAGCATC.............................................. 28 0 4 0.50 2 1 1 0 0 0 0 0 0 0
................................................................................GGCACATTGACTCGAAGTCG.................................................... 20 0 4 0.50 2 2 0 0 0 0 0 0 0 0
...............................................................................CGGCACATTGACTCGAAGT...................................................... 19 0 4 0.50 2 2 0 0 0 0 0 0 0 0
............................................................................TCTCGGCACATCGACTCGAAGTC..................................................... 23 1 4 0.50 2 2 0 0 0 0 0 0 0 0
...................................................................................................................TCTGAGGAGAAGCCTTCCTGGTCTG............ 25 0 6 0.50 3 3 0 0 0 0 0 0 0 0
...................................................................................ACATTGACTCGAAGTCGAGCATCAGTA.......................................... 27 1 4 0.50 2 0 2 0 0 0 0 0 0 0
..............................................................CATCTGAGACTCTCTCTCGGC..................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................CGCGTCCGAGTCATCTGAGACTCTCT........................................................................... 26 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................AGTCATCTGAGACTCTCTCTCGGCA.................................................................... 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................................................CTTCCTGGTCTGGCTCCAGCTCG. 23 0 8 0.50 4 4 0 0 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAGTCTC................................................... 24 2 4 0.50 2 2 0 0 0 0 0 0 0 0
...................................................................................ACATTGACTCGAAGTCGAGCAT............................................... 22 0 4 0.50 2 2 0 0 0 0 0 0 0 0
..................................................................................................................................TCCTGGTCTGGCTCCAGCTCGC 22 1 8 0.50 4 2 0 2 0 0 0 0 0 0
..............................................................................TCGGCACATTGACTCGAAGTCGAGCAA............................................... 27 1 4 0.50 2 2 0 0 0 0 0 0 0 0
.......................................................TCCGAGTCATCTGAGACTCTCT........................................................................... 22 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................CCGCGTCCGAGTCATCTGAGACTCT............................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...........................................................AGTCATCTGAGACTCTCTCTC........................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAATTCGAGCATCAG............................................ 26 1 4 0.50 2 0 0 0 2 0 0 0 0 0
...........................................................AGTCATCTGAGACTCTCTCTCGGC..................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................CCGCGTCCGAGTCATCTGAGACTCTCTC.......................................................................... 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..................................................................................CACATTGACTCGAAGTCGAGCATCAAT........................................... 27 1 4 0.50 2 2 0 0 0 0 0 0 0 0
.......................................................TCCGAGTCATCTGAGACTCTCTC.......................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAGTCTCGCA................................................ 27 2 4 0.50 2 2 0 0 0 0 0 0 0 0
...........................................................AGTCATCTGAGACTCTCTCTCGGCACAT................................................................. 28 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...................................................CGCGTCCGAGACATCTGAGACTCTCTC.......................................................................... 27 1 2 0.50 1 1 0 0 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGAAA....................................................... 20 1 4 0.50 2 2 0 0 0 0 0 0 0 0
...........................................................ATTCATCTGAGACTCTCTCTCGGCAC................................................................... 26 1 2 0.50 1 0 0 1 0 0 0 0 0 0
.............................................................................CTCGGCACATTTACTCGAAGTCG.................................................... 23 1 4 0.50 2 2 0 0 0 0 0 0 0 0
.............................................................................CTCGGCACATTGACTCGA......................................................... 18 0 4 0.50 2 2 0 0 0 0 0 0 0 0
.............................................................TCATCTGAGACTCTCTCTCGGCACATTGA.............................................................. 29 0 2 0.50 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

TAAACTTCCTAGGAATCCTGGTAGAAGTTCTAAGAGGTGGTGGCACTACGGGCGCAGGCTCAGTAGACTCTGAGAGAGAGCCGTGTAACTGAGCTTCAGCTCGTAGTCAAGACACAGACTCCTCTTCGGAAGGACCAGACCGAGGTCGAGCA
************************************.(((.....((((((.((....(((((((.((((((.....)))))).....)))))))....)).)))))).....))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 V112
male body		 SRR902011
testis
 GSM343916
embryo
 M062
head
 M059
embryo
..............................................................GTAGACTCTGAGAGAGAGCCGTGT.................................................................. 24 0 2 12.50 25 17 0 8 0 0 0 0
.....................................................................................................................ACTCCTCTTCGGAAGGACCAGAC............ 23 0 6 11.17 67 66 0 0 0 0 0 1
................................................................AGACTCTGAGAGAGAGCCGTGT.................................................................. 22 0 10 10.10 101 91 2 8 0 0 0 0
...............................................................TAGACTCTGAGAGAGAGCCGTGT.................................................................. 23 0 3 6.67 20 17 0 2 0 1 0 0
......................................................................................................................CTCCTCTTCGGAAGGACCAGAC............ 22 0 6 6.50 39 36 2 1 0 0 0 0
.............................................................AGTAGACTCTGAGAGAGAGCCGTGT.................................................................. 25 0 2 6.00 12 7 0 3 0 2 0 0
............................................................CAGTAGACTCTGAGAGAGAGCCGTGT.................................................................. 26 0 2 5.00 10 7 0 1 0 0 1 1
.....................................................................CTGAGAGAGAGCCGTGTAACTGA............................................................ 23 0 5 3.80 19 7 7 0 5 0 0 0
....................................................................................................................GACTCCTCTTCGGAAGGACCAGAC............ 24 0 6 3.33 20 16 2 1 1 0 0 0
...........................................................................................AGCTTCAGCTCGTAGTCAAGACA...................................... 23 0 4 3.00 12 10 0 0 1 0 1 0
..........................GTTCTAAGAGGTGGTGGCACTAC....................................................................................................... 23 0 8 2.88 23 23 0 0 0 0 0 0
.......................................................................................................................TCCTCTTCGGAAGGACCAGAC............ 21 0 6 2.33 14 14 0 0 0 0 0 0
........................................................................................................................CCTCTTCGGAAGGACCAGAC............ 20 0 6 2.17 13 12 0 0 0 1 0 0
.................................................................GACTCTGAGAGAGAGCCGTGT.................................................................. 21 0 10 2.10 21 18 0 1 0 2 0 0
................................................CGGGCGCAGGCTCAGTAGACT................................................................................... 21 0 1 2.00 2 0 0 0 2 0 0 0
......................................GGTGGCACTACGGGCGCAGGCTCAGT........................................................................................ 26 0 1 2.00 2 0 2 0 0 0 0 0
..................................................................................................................CAGACTCCTCTTCGGAAGGACCAGAC............ 26 0 1 2.00 2 2 0 0 0 0 0 0
...........................................................TCAGTAGACTCTGAGAGAGAGCCGTGT.................................................................. 27 0 2 2.00 4 4 0 0 0 0 0 0
...................................................................................................................AGACTCCTCTTCGGAAGGACCAGAC............ 25 0 6 2.00 12 11 0 1 0 0 0 0
................................................................................................CAGCTCGTAGTCAAGACACAGACT................................ 24 0 1 2.00 2 0 2 0 0 0 0 0
............................................................CAGTAGACTCTGAGAGAGAGCCGT.................................................................... 24 0 2 2.00 4 1 0 2 0 0 0 1
...................GGTAGAAGTTCTAAGAGGTGGT............................................................................................................... 22 0 11 1.91 21 6 9 0 6 0 0 0
..........................................................................................GAGCTTCAGCTCGTAGTCAAGACA...................................... 24 0 4 1.50 6 6 0 0 0 0 0 0
......................................................................TGAGAGAGAGCCGTGTAACTGA............................................................ 22 0 5 1.40 7 4 0 0 3 0 0 0
..................TGGTAGAAGTTCTAAGAGGTGGT............................................................................................................... 23 0 11 1.27 14 2 6 0 6 0 0 0
................................................................AGACTCTGAGAGAGAGCCGTG................................................................... 21 0 10 1.20 12 12 0 0 0 0 0 0
...................GGTAGAAGTTCTAAGAGGTGGTGGCACT......................................................................................................... 28 0 7 1.14 8 1 5 0 2 0 0 0
.......................................................................GAGAGAGAGCCGTGTAACTGA............................................................ 21 0 5 1.00 5 1 4 0 0 0 0 0
.....................................................................................................................ACTCCTCTTCGGAAGGACCAGA............. 22 0 6 1.00 6 6 0 0 0 0 0 0
...............................................................................................TCAGCTCGTAGTCAAGACACA.................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................GTAGACTCTGAGAGAGAGCCGT.................................................................... 22 0 2 1.00 2 2 0 0 0 0 0 0
..............................................................................................TTCAGCTCGTAGTCAAGACAC..................................... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................GCTTCAGCTCGTAGTCAAGACA...................................... 22 0 4 1.00 4 4 0 0 0 0 0 0
................................................................................................................CACAGACTCCTCTTCGGAAGGACCAGAC............ 28 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................CACAGACTCCTCTTCGGAAGGACCAGA............. 27 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................ACTCTGAGAGAGAGCCGTGT.................................................................. 20 0 10 1.00 10 7 0 2 0 1 0 0
.........................................................................................TGAGCTTCAGCTCGTAGTCAAGTCA...................................... 25 1 4 1.00 4 0 4 0 0 0 0 0
.....................................TGGTGGCACTACGGGCGCAGGC............................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................TCAGCTCGTAGTCAAGACA...................................... 19 0 4 0.75 3 3 0 0 0 0 0 0
.........................AGTTCTAAGAGGTGGTGGCACTAC....................................................................................................... 24 0 8 0.75 6 6 0 0 0 0 0 0
.............................................................AGTAGACTCTGAGAGATAGCCGTGT.................................................................. 25 1 2 0.50 1 0 0 1 0 0 0 0
.............................................................AGTAGACTCTGAGAGAGAGCC...................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0
..............................................................GTAGGCTCTGAGAGAGAGCCGTGT.................................................................. 24 1 2 0.50 1 1 0 0 0 0 0 0
..................................................GGCGCAGGCTCAGTAGACT................................................................................... 19 0 2 0.50 1 0 1 0 0 0 0 0
.........................................................................................TGAGCTTCAGCTCGTAGTCAAGACA...................................... 25 0 4 0.50 2 2 0 0 0 0 0 0
..............................................................................................TTCAGCTCGTAGTCAAGACA...................................... 20 0 4 0.50 2 1 0 1 0 0 0 0
..................................................TGCGCAGGCTCAGTAGAC.................................................................................... 18 1 2 0.50 1 1 0 0 0 0 0 0
.........................................................GCTCAGTAGACTCTGAGAGAGAGCCGTGT.................................................................. 29 0 2 0.50 1 0 0 0 0 0 1 0
.............................................................TGTAGACTCTGAGAGAGAGCCGTGT.................................................................. 25 1 2 0.50 1 0 0 0 1 0 0 0
........................................................................................TTGAGCTTCAGCTCGTAGT............................................. 19 1 4 0.50 2 2 0 0 0 0 0 0
....................................................................................................................GACTCCTCTTCGGAAAGACCAGAC............ 24 1 6 0.50 3 3 0 0 0 0 0 0
.............................................................................................CTTCAGCTCGTAGTCAAGACA...................................... 21 0 4 0.50 2 1 0 0 0 1 0 0
..............................................................GTAGACTCTGAGAGAGAGCTGTGT.................................................................. 24 1 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................CTCCTCTTCGGAAGGACCAGA............. 21 0 6 0.50 3 3 0 0 0 0 0 0
..............................................................GTAGACTCTGAGAGAGAGCCGTG................................................................... 23 0 2 0.50 1 1 0 0 0 0 0 0
.............................................................AGTAGACTCTGAGAGAGAGCCGTGTC................................................................. 26 1 2 0.50 1 1 0 0 0 0 0 0
...........................................................AAAGTAGACTCTGAGAGAGAGCCGT.................................................................... 25 2 2 0.50 1 1 0 0 0 0 0 0
..............................................................GTGGACTCCGAGAGAGAGCCGTGT.................................................................. 24 2 2 0.50 1 0 0 0 0 0 1 0
..............................................................GTACACTCTGAGAGAGAGCCGTGT.................................................................. 24 1 2 0.50 1 0 0 1 0 0 0 0
...........................................................ACAGTAGACTCTGAGAGAGAGCCGTGT.................................................................. 27 1 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................CTCCTCTTCGGAAAGACCAGAC............ 22 1 6 0.50 3 2 0 0 0 0 0 1
.............................................................AGTAGACTCTGAGAGAGAGCCGTG................................................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
........CTAGGAATCCTGGTAGAAGTTCT......................................................................................................................... 23 0 8 0.50 4 2 0 0 2 0 0 0
............................................................CAGTCGACTCTGAGAGAGAGCCGTGT.................................................................. 26 1 2 0.50 1 0 0 0 0 1 0 0
...................GGTAGAAGTTCTAAGAGGTGGTG.............................................................................................................. 23 0 11 0.45 5 1 4 0 0 0 0 0
........................AAGTTCTAAGAGGTGGTGGCACTAC....................................................................................................... 25 0 7 0.43 3 2 0 1 0 0 0 0
......................AGAAGTTCTAAGAGGTGGTGGCACT......................................................................................................... 25 0 7 0.43 3 3 0 0 0 0 0 0
.......................GAAGTTCTAAGAGGTGGTGGCACT......................................................................................................... 24 0 7 0.43 3 3 0 0 0 0 0 0
................................................................AGACTCTGAGAGAGAGCCGTGTAACTG............................................................. 27 0 5 0.40 2 0 2 0 0 0 0 0
...................................................................CTCTGAGAGAGAGCCGTGT.................................................................. 19 0 10 0.40 4 4 0 0 0 0 0 0
....................................................................TCTGAGAGAGAGCCGTGTAACTG............................................................. 23 0 5 0.40 2 1 1 0 0 0 0 0
...................................................................CTCTGAGAGAGAGCCGTGTAACTG............................................................. 24 0 5 0.40 2 0 0 0 2 0 0 0
....................................................................TCTGAGAGAGAGCCGTGT.................................................................. 18 0 10 0.40 4 4 0 0 0 0 0 0
.................CTGGTAGAAGTTCTAAGAGGTGGT............................................................................................................... 24 0 8 0.38 3 0 1 0 1 0 0 1
.................CTGGTAGAAGTTCTAAGAGGTGGTG.............................................................................................................. 25 0 8 0.38 3 1 2 0 0 0 0 0
..................TGGTAGAAGTTCTAAGAGGTGGTG.............................................................................................................. 24 0 11 0.36 4 0 4 0 0 0 0 0
.............................................................AATAGACTCTGAGAGAGAGCCGTGT.................................................................. 25 1 3 0.33 1 0 0 0 0 1 0 0
........................................................................................................................CCTCTTCGGAAGGACCAGACC........... 21 0 6 0.33 2 0 0 0 0 0 2 0
............................TCTAAGAGGTGGTGGCACTAC....................................................................................................... 21 0 9 0.33 3 3 0 0 0 0 0 0
.........................................................................GAGAGAGCCGTGTAACTGAGCTTCAGC.................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
............................................................................AGAGCCGTGTAACTGAGCTTCAGCT................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................ACTCCTCTTCGGAAGCACCAGAC............ 23 1 6 0.33 2 2 0 0 0 0 0 0
......................................................................................................................ATCCTCTTCGGAAGGACCAGAC............ 22 1 6 0.33 2 2 0 0 0 0 0 0
.....................................................................................................................ACTCCTCTTCGGAAAGACCAGAC............ 23 1 6 0.33 2 2 0 0 0 0 0 0
.......................................................................................................................TCCTCTTCGGAAGGACCAGA............. 20 0 6 0.33 2 2 0 0 0 0 0 0
.......................................................................................................................CCCTCTTCGGAAGGACCAGAC............ 21 1 6 0.33 2 2 0 0 0 0 0 0
........................................................................................................................CCTCTTCGGAAGGACCAGA............. 19 0 6 0.33 2 2 0 0 0 0 0 0
.........................................................................................................................CTCTTCGGAAGGACCAGAC............ 19 0 12 0.33 4 3 0 0 0 0 0 1
................................................................TGACTCTGAGAGAGAGCCGTGT.................................................................. 22 1 10 0.30 3 1 0 0 0 2 0 0
...............................................................AAGACTCTGAGAGAGAGCCGTGT.................................................................. 23 1 10 0.30 3 3 0 0 0 0 0 0
.......................GAAGTTCTAAGAGGTGGTGGCACTAC....................................................................................................... 26 0 7 0.29 2 0 2 0 0 0 0 0
........................AAGTTCTAAGAGGTGGTGGCACTA........................................................................................................ 24 0 7 0.29 2 2 0 0 0 0 0 0
........................................................................AGAGAGAGCCGTGTAACTGA............................................................ 20 0 7 0.29 2 2 0 0 0 0 0 0
........................................................................................CTGAGCTTCAGCTCGTAGTCAAGACA...................................... 26 0 4 0.25 1 1 0 0 0 0 0 0
............................................................................................GCTTCAGCTCGTAGTCAAGAC....................................... 21 0 4 0.25 1 1 0 0 0 0 0 0
................................................................................................CAGCTCGTAGTCAAGACA...................................... 18 0 4 0.25 1 1 0 0 0 0 0 0
..............................................................................................ATCAGCTCGTAGTCAAGACA...................................... 20 1 4 0.25 1 1 0 0 0 0 0 0
.........................................................................................CGAGCTTCAGCTCGTAGTCAAGACA...................................... 25 1 4 0.25 1 1 0 0 0 0 0 0
.........................................................................................AGAGCTTCAGCTCGTAGTCAAGACA...................................... 25 1 4 0.25 1 1 0 0 0 0 0 0
..............................................................................AGCCGTGTAACTGAGCTTCAGCTCGT................................................ 26 0 4 0.25 1 1 0 0 0 0 0 0
..........................GTTCTAAGAGGTGGTGGCACTA........................................................................................................ 22 0 8 0.25 2 2 0 0 0 0 0 0
.............................................................................................CTTCAGCTCGTAGTCAAGAC....................................... 20 0 4 0.25 1 1 0 0 0 0 0 0
............................................................CAGTAGACTCTAAGAGAGAGCCGTGT.................................................................. 26 1 4 0.25 1 1 0 0 0 0 0 0
.........................................................................................TGAGCTTCAGCTCGTAGTTAAGGC....................................... 24 2 4 0.25 1 1 0 0 0 0 0 0
.......................................................................................GCCTAGCTTCAGCTCGTAGTCAAGAC....................................... 26 3 4 0.25 1 1 0 0 0 0 0 0
........................................................................................CTGAGCTTCAGCTCGTAGTCA........................................... 21 0 4 0.25 1 1 0 0 0 0 0 0
...........................................................................................AGCTTCAGCTCGTAGTCAAG......................................... 20 0 4 0.25 1 1 0 0 0 0 0 0
...........................................................................................AGCTTCAGCTCGTAGTCAAGAC....................................... 22 0 4 0.25 1 1 0 0 0 0 0 0
........................................................................................CTGAGCTTCAGCTCGTAGTCAAG......................................... 23 0 4 0.25 1 1 0 0 0 0 0 0
...........GGAATCCTGGTAGAAGTTCTAAGA..................................................................................................................... 24 0 8 0.25 2 2 0 0 0 0 0 0
...........................................................................................AGCTTCAGCTCGTAGTTAAGGCA...................................... 23 2 4 0.25 1 1 0 0 0 0 0 0
.........................................................................................TGAGCTTCAGAGCGTAGTCAAGACA...................................... 25 2 4 0.25 1 1 0 0 0 0 0 0
...........................................................................................AGCTTCAGCTCGTAGTCAAGTCA...................................... 23 1 4 0.25 1 1 0 0 0 0 0 0
............................................................................................GCTTCAGCTCGTAGTCAAGTCA...................................... 22 1 4 0.25 1 1 0 0 0 0 0 0
........................................................................................CTGAGCTTCAGCTCGTAGTTAAGGCA...................................... 26 2 4 0.25 1 1 0 0 0 0 0 0
.........................AGTTCTAAGAGGTGGTGGCACTA........................................................................................................ 23 0 8 0.25 2 2 0 0 0 0 0 0
.......................................................AGGCTCAGTAGTCTCAGACA............................................................................. 20 3 4 0.25 1 0 0 0 1 0 0 0
...........................................................................................AGCTTCAGAGCGTAGTCAAGAC....................................... 22 2 4 0.25 1 1 0 0 0 0 0 0
......................................................................................AACTGAGCTTCAGCTCGTA............................................... 19 0 4 0.25 1 1 0 0 0 0 0 0
.................CTGGTAGAAGTTCTAAGAGGT.................................................................................................................. 21 0 8 0.25 2 1 0 1 0 0 0 0
......................................................................TGAGAGAGAGCCATGTAACTGA............................................................ 22 1 5 0.20 1 0 0 0 1 0 0 0
....................................................................TCTGAGAGAGAGCCGTGTAACTGA............................................................ 24 0 5 0.20 1 1 0 0 0 0 0 0
...................................................................CTCTGAGAGAGAGCCGTGTAACTGA............................................................ 25 0 5 0.20 1 1 0 0 0 0 0 0
....................................................................ACTGAGAGAGAGCCGTGTAACT.............................................................. 22 1 5 0.20 1 1 0 0 0 0 0 0
..................TGGTAGAAGTTCTAAGAGGTGGTGT............................................................................................................. 25 1 11 0.18 2 0 1 0 1 0 0 0
..................TGGTAGAAGTTCTAAGAGGTG................................................................................................................. 21 0 11 0.18 2 0 1 0 0 0 0 1
.......................................................................................................................TCCTCTTCGGAAGGACCAGACG........... 22 1 6 0.17 1 1 0 0 0 0 0 0
...................................................................................................................AGACTCCTCTTCGGAAAGACCAGAC............ 25 1 6 0.17 1 1 0 0 0 0 0 0
....................................................................................................................CACTCCTCTTCGGAAGGACCAGAC............ 24 1 6 0.17 1 1 0 0 0 0 0 0
....................................................................................................................GACTCCTCTTCGGAAGGACCAGA............. 23 0 6 0.17 1 1 0 0 0 0 0 0
......................................................................................................................CTCCTCTTCGGAAGCACCAGAC............ 22 1 6 0.17 1 1 0 0 0 0 0 0
.....................................................................................................................ACTCCTCTTCGGAAAGACCAGA............. 22 1 6 0.17 1 1 0 0 0 0 0 0
...................................................................................................................AGACTCCTCTTCGGAAAGACCAGACG........... 26 2 6 0.17 1 1 0 0 0 0 0 0
.....................................................................................................................CCTCCTCTTCGGAAGGACCAGAC............ 23 1 6 0.17 1 0 0 1 0 0 0 0
...........GGAATCCTGGTAGAAGT............................................................................................................................ 17 0 12 0.17 2 0 0 0 2 0 0 0
.......................................................................................................................TCCTCTTCGGAAGCACCAGAC............ 21 1 6 0.17 1 0 0 1 0 0 0 0
....................................................................................................................GACTCCTCTTCGGAAGCACCAGAC............ 24 1 6 0.17 1 1 0 0 0 0 0 0
......................................................................................................................TTCCTCTTCGGAAGGACCAGAC............ 22 1 6 0.17 1 1 0 0 0 0 0 0
...................................................................................................................AGAATCCTCTTCGGAAGGACCAGAC............ 25 1 6 0.17 1 1 0 0 0 0 0 0
....................................................................................................................GACTCCTCTTCGGAAAGACCAGA............. 23 1 6 0.17 1 1 0 0 0 0 0 0
.......................................................................................................................TCCTCTTCGGAAAGACCAGAC............ 21 1 6 0.17 1 1 0 0 0 0 0 0
.....................................................................................................................ACTCCTCTTCGGAAGGACCAGGC............ 23 1 6 0.17 1 1 0 0 0 0 0 0
..................................................................................................................AAGACTCCTCTTCGGAAGGACCAGACC........... 27 1 6 0.17 1 1 0 0 0 0 0 0
.....................................................................................................................ACTCCTCTTCGGAAGGACCAGACC........... 24 0 6 0.17 1 1 0 0 0 0 0 0
........................................................................................................................CCTCTTCGGAAAGACCAGAC............ 20 1 6 0.17 1 1 0 0 0 0 0 0
.......................GAAGTTCTAAGAGGTGGTGGCAC.......................................................................................................... 23 0 7 0.14 1 1 0 0 0 0 0 0
......................AGAAGTTCTAATAGGTGGTGGCACTAC....................................................................................................... 27 1 7 0.14 1 1 0 0 0 0 0 0
.....................AAGAAGTTCTAAGAGGTGGTGGCACT......................................................................................................... 26 1 7 0.14 1 1 0 0 0 0 0 0
...................GGTAGAAGTTCTAAGAGGTGGTGGCAC.......................................................................................................... 27 0 7 0.14 1 1 0 0 0 0 0 0
.....................AAAAAGTTCTAAGAGGTGGTGGCACT......................................................................................................... 26 2 7 0.14 1 1 0 0 0 0 0 0
......................AGAAGTTCTAAGAGGTGGTGGCACTA........................................................................................................ 26 0 7 0.14 1 1 0 0 0 0 0 0
.....................AAGAAGTTCTAAGAGGTGGTGGCACTAC....................................................................................................... 28 1 7 0.14 1 0 0 1 0 0 0 0
..........................................................................AGAGAGCCGTGTAACTGA............................................................ 18 0 7 0.14 1 1 0 0 0 0 0 0
...........GGAATCCTGGTAGAAGTTCT......................................................................................................................... 20 0 8 0.13 1 1 0 0 0 0 0 0
..........................GTTCTAAGAGGTGGTGGCACT......................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0
..........GGGAATCCTGGTAGAAGTTC.......................................................................................................................... 20 1 8 0.13 1 0 0 1 0 0 0 0
......TCCTAGGAATCCTGGTAGAAGTTCTAAG...................................................................................................................... 28 0 8 0.13 1 1 0 0 0 0 0 0
..........AGGAATCCTGGTAGAAGTTCTAAGA..................................................................................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0
.........................AGTTCTAAGAGGTGGTGGCAC.......................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0
................CCTGGTAGAAGTTCTAAGAGG................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0
................CCTGGTAGAAGTTCTAAGAGGTGGT............................................................................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0
.........................AGTTCTAAGAGGTGGTGGCACT......................................................................................................... 22 0 8 0.13 1 1 0 0 0 0 0 0
................CCTGGTAGAAGTTCTAAGAGGTG................................................................................................................. 23 0 8 0.13 1 1 0 0 0 0 0 0
...........GGAATCCTGGTAGAAGTTCTAAGAGGTG................................................................................................................. 28 0 8 0.13 1 1 0 0 0 0 0 0
...............................................................................................................................GGAAGGACCAGACCGAGGTCGAGCA 25 0 8 0.13 1 1 0 0 0 0 0 0
...............TCCTGGTAGAAGTTCTAAGAG.................................................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0
..........................GTTCTAAGAGGTGGTGGCAC.......................................................................................................... 20 0 8 0.13 1 1 0 0 0 0 0 0
..............................................................................................................................CGGAAGGACCAGTCAGAGGTCG.... 22 2 9 0.11 1 0 0 0 1 0 0 0
.............................................................AGGAGACTCTGAGAGAGAGCCGTGT.................................................................. 25 1 9 0.11 1 1 0 0 0 0 0 0
.............................................................GGGAGACTCTGAGAGAGAGCCGTGT.................................................................. 25 2 9 0.11 1 1 0 0 0 0 0 0
.......................GAAGTTCTAAGAGGTGGTGGCA........................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0
........CTGGGAATCCTGGTAGAAGT............................................................................................................................ 20 1 10 0.10 1 1 0 0 0 0 0 0
................................................................AGACTCTGAGAGAGAGCCGTGTC................................................................. 23 1 10 0.10 1 1 0 0 0 0 0 0
.................................................................GACTCTGAGAGAGAGCCGTGC.................................................................. 21 1 10 0.10 1 0 0 1 0 0 0 0
................................................................GGACGCTGAGAGAGAGCCGTGT.................................................................. 22 2 10 0.10 1 0 0 0 0 1 0 0
.................................................................GACTCTGAGAGAGAGCCGTGTA................................................................. 22 0 10 0.10 1 1 0 0 0 0 0 0
.................................................................GACTCTGAGAGAGAGCCGTG................................................................... 20 0 10 0.10 1 1 0 0 0 0 0 0
...................................................................ATCTGAGAGAGAGCCGTGT.................................................................. 19 1 10 0.10 1 1 0 0 0 0 0 0
.................................................................GACTCTGAGAGAGAGCCGTGTG................................................................. 22 1 10 0.10 1 1 0 0 0 0 0 0
.................................................................GACTCTGAGAGAGAGCCG..................................................................... 18 0 10 0.10 1 1 0 0 0 0 0 0
................................................................AGACTCTGAGAGAGAGCCGTCT.................................................................. 22 1 10 0.10 1 0 0 1 0 0 0 0
................................................................AGACTCTGAGAGAGGGCCGTGT.................................................................. 22 1 10 0.10 1 0 0 1 0 0 0 0
..................TGGTAGAAGTTCTAAGAGGTGGTGG............................................................................................................. 25 0 11 0.09 1 0 0 0 1 0 0 0
....................GTAGAAGTTCTAAGAGGTGGTGGC............................................................................................................ 24 0 11 0.09 1 0 0 1 0 0 0 0
...................GGTAGAAGTTCTAAGATGTGGTGG............................................................................................................. 24 1 11 0.09 1 0 0 0 1 0 0 0
...................GGTAGAAGTTCTAAGAGGTGGTGGC............................................................................................................ 25 0 11 0.09 1 0 1 0 0 0 0 0
...................GGTAGAAGTTCTAAGAGGTG................................................................................................................. 20 0 11 0.09 1 1 0 0 0 0 0 0
..............................AAAGAGGTGGTGGCACTA........................................................................................................ 18 1 11 0.09 1 1 0 0 0 0 0 0
.........................................................................................................................CTCTTCGGAAGGACCAGA............. 18 0 12 0.08 1 1 0 0 0 0 0 0
.......................................................................................................................AACTCTTCGGAAGGACCAGAC............ 21 2 12 0.08 1 0 0 0 0 1 0 0
....................GTAGAAGTTCTAAGAGTT.................................................................................................................. 18 1 12 0.08 1 1 0 0 0 0 0 0
.....................................................................................................................GCTCCTCTTCGGAAGGACCAGAC............ 23 1 13 0.08 1 1 0 0 0 0 0 0
.......................................................................................................................AAATCTTCGGAAGGACCAGAC............ 21 3 14 0.07 1 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_singleton_177:153-304 + dps_230 ATTTGA-A-------------------GGATCCT----TAGGACCATCTTCAAGATTCTCCACCACCGTGATGCCCGCGTCCGAGT-------CATCTG-AGACTCTCTCTCGGCACATTGACTC-------------------------GAAGTCGAGCA----TCA---------GTTCTGTGTCTGAGGAGAAGCCTTCCTGG-TCTGGCTCC-----AGCTCGT
droPer2 scaffold_1333:4238-4389 - GCTTGG-GGAGCCACCT---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGGAAGTACGGCCGAAGCC--CATTCCACCTTCTTCAGCCATTCGGCTGATGGGCTGGCTTCACTGCT----GGCGTGTTGCCGACGGAGTA---------TGTG-CCCTGCACTCCTCTTTT-----CGGCATA
droVir3 scaffold_13047:17379752-17379903 - AATTGC-CTCTGCGTGC---TTGATGG-----TTTTTCGC----TGA------------------------------------------AGCTTTGGTGCACACTCCGGGCC--CATTTAATTTTTTTCAGCCAGTCTGCTGATTGATTGGCCGTTCTGCA----CGCGTTCTGCCAAAGAAGGA---------TATG-CTCTGCGCTCTTTTTCT-----CCCAATA
droMoj3 scaffold_6500:17456709-17456848 - GTCCTC-T-------------------GGACT-TGCTGCC----CAA------------------------------------------AATTCGGAAACACCGTATTCGCC--CATTCAAGTTTCTTCAGCCAGGCAGCCGATGGGTTGGTTATATTGCT----AGTCCTTTGATGCTTTAATA---------TACT-GCTAGCTTTTCTTTTCT-----CTTCGTA
droGri2 scaffold_15116:1470937-1471073 - TTGGGT-G-------------------GT----GCTTTAC----TGA------------------------------------------ACTTTGGCAGCACCTTTTTGGCC--CACGCCACCTTGTTCCGCCATTCGGCTAGTGGGGTGGCCGCCGCATT----CGCGTTCTGCCGCTTTAGAA---------TGCT-TGCTGCATTTCTCCTCT-----CGGCATA
droAna3 scaffold_13499:1093736-1093900 + ATCTGC-A-------------------GGAATGT----CAGGGACATCCTTTAGATTCTCCACCACAGTAATCTCCGCCTCGGTGTCGGAGCCCAGCAA-AGAGTCCTCCTC--CATGCCGACGCCACCAAGAGCCCTCGC---------CAG--GTCACTCTCC--------------------TCTGAGGTGTACCCTTCCAGAATGTCCTCCT-----CCACATC
droBip1 scf7180000394909:16477-16646 + ATTTGC-A-------------------GGATCGT----CAGGGACATCTTTACAATTCTCCACCACAGTAACTTTTGCCTCCGTTTCCGAGCTTAGCAG-AGAGTCCTCCTC--CATTCCGACTCCACTAAGTGCCCTTGC---------CAA--GTCGCTTTCC--------------------TCCGAGGTGTACCCTTCCAGGATGTCCTCCGGGTGCCCCTCTT
droEle1 scf7180000491353:3133-3286 - TTGCTGTGCGCCCTCTGCACTCGGCCG-----TTTTTGGC----CTT------------------------------------------AGTTTGGGAGCACAGTCTTTGTC--CATTCCACCCTCTTCAACCATTCGGCTAAGGGATTGACAATCTTGCT----CCTTT--TGGGCTCAGAGTG---------ACTG-CGCAACATTCCGCTTCT-----ACGCATA
droRho1 scf7180000779010:20594-20748 - GCCTGA-GCACCTTCTTGTTGG-----GGCTTCTCTTGCC----CAT------------------------------------------AGTTGGGAAACACCGTCCTTGCC--CACTCTACCTTCTTTAGCCATTCGGGCGAAGGCGTGGCGACAGTGCT----TCTGGCATGTGAGCGCAGGG---------TTTG-GGCGGCAGTCCGTCTCT-----CTGCGTA
droBia1 scf7180000302283:55158-55300 + ATTTGC-A-------------------GAGGTCT----TAATATCTACAGCTGCAACCTCCACCACGGTCACATCGGCCTCTTTCG-------TAT-----------TCC-T--CAGATCCACGTCTTCGATTGCCGTTCC---------AAG----CGCTCGCAT------CA---TCGACGAA-----------TCAGTCGATTAGCCGTCCT-------CCGGCT
droTak1 scf7180000414427:1570-1710 - GCTCGA-G-------------------GGCTTATCCTGCC----CAT------------------------------------------AGTTGGGAAGCACCAACTTTGCC--CACTCTACCTTCTTCAGCCATTCTGGCGAAGGTGTGGCAATGTTGCT----CCTTGCATGTGAGCGCAGAG---------TCTG-GGCGGCAGTCCGTCTTT-----CCGCGTA
droYak3 v2_chrUn_005:66821-66957 - GCTTTG-G-------------------GGGCT-TCCTTGC----CGA------------------------------------------AGTTTGGCAAAACGGTTCTTGCC--CATTCCACCTTCTTCATCCATTCAGCCGAAGGAGCCGTTTT---CGA----TATCTCCTGGCAGCGTAGGA---------TTTG-ACCTGCAGATCGTTTCT-----CTGCGTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ATTTGA-A-------------------GGATCCT----TAGGACCATCTTCAAGATTCTCCACCACCGTGATGCCCGCGTCCGAGT-------CATCTG-AGACTCTCTCTCGGCACATTGACTC-------------------------GAAGTCGAGCA----TCA---------GTTCTGTGTCTGAGGAGAAGCCTTCCTGG-TCTGGCTCC-----AGCTCGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGA......................................................................2531163.673491933637702123070
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCG.......................................................................243741.0022236216614040111840
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTC........................................................................233563.331690916273610011600
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAG.....................................................................263130.00390037160400900
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAGC....................................................................273120.6736202821110006080
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAGCA----...............................................................283116.33349033540000730
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGT.........................................................................22383.67251323530101800
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGTCGA......................................................................24481.00324032400000000
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGTCG.......................................................................23455.50222022200000000
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGTC........................................................................22444.75179017900000000
........................................................................................................................................................................................................TCCTGG-TCTGGCTCC-----AGCTCGT22833.13265025320202330
........................................................................................................................................................................................................TCCTGG-TCTGGCTCC-----AGCTCG.21822.25178017500200100
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGT......................................................................25318.335505110001200
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCT.......................................................................24318.005414740200000
..............................................................................................................TCGGCACATTGACTC-------------------------GAAGTCGAGCA----...............................................................26415.2561139200001900
..................................................................................................................CACATTGACTC-------------------------GAAGTCGAGCA----...............................................................22414.005605400000110
..............................................................................................................TCGGCACATTGACTC-------------------------GAAGTCGAGCA----T..............................................................27411.7547011000003600
..........................................................................................................TCTCTCGGCACATTGACTC-------------------------GAAG..........................................................................23311.003303010000200
.....................................................................................T-------CATCTG-AGACTCTCTCTCGGCACAT.............................................................................................................26211.002201700000500
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAA.....................................................................26310.333102910100000
...........................................................................................................CTCTCGGCACATTGACTC-------------------------GAAGTCG.......................................................................25310.003002610000300
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGTCGAGCA----...............................................................2749.753903900000000
..................................................................................................................CACATTGACTC-------------------------GAAGTCGAGCA----TCA---------GT.................................................2749.2537022100001220
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAG..........................................................................2139.002702600000100
..........................................................................................................TCTCTCGGCACATTGACTC-------------------------GAAGT.........................................................................2438.672602410100000
..............................................................................................................TCGGCACATTGACTC-------------------------GAAGTCGAGC....................................................................2548.5034013303001230
........................................................................................................................................................................................................TCCTGG-TCTGGCTCC-----AGCTC..2087.385905430200000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAGCA----T..............................................................2937.332204000011250
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGTCGAG.....................................................................2547.252902900000000
........................................................................................................TCTCTCTCGGCACATTGACTC-------------------------GAAG..........................................................................2536.331901510100200
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCTC......................................................................2536.331901900000000
...............................................................................................................CGGCACATTGACTC-------------------------GAAGTCGAGCA----T..............................................................2646.252501000002220
..........................................................................................................TCTCTCGGCACATTGACTC-------------------------GAAGTC........................................................................2536.001801710000000
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGT.........................................................................2146.002402400000000
..............................................................................................................TCGGCACATTGACTC-------------------------GAAGTCGA......................................................................2345.752302200000010
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGTCGAGC....................................................................2645.502202200000000
.....................................................................................T-------CATCTG-AGACTCTCTCTCGGCAC...............................................................................................................2425.501101010000000
..........................................................................................................TCTCTCGGCACATTGACTC-------------------------GAAGTCG.......................................................................2635.331601600000000
........................................................................................................................................................................................................TCCTGG-TCTGGCTCC-----AGCT...1984.253403210100000
..................................................................................................................CACATTGACTC-------------------------GAAGTCGAGCA----T..............................................................2344.251701300000400
.................................................................................................TG-AGACTCTCTCTCGGCACATTGACTC-------------------------..............................................................................2754.202101601000400
.TTTGA-A-------------------GGATCCT----TAGGACCATCT...................................................................................................................................................................................24104.2042023102001600
.................................................TCAAGATTCTCCACCACCGTGATG...........................................................................................................................................................2484.003203200000000
..............................................................................................................TCGGCACATTGACTC-------------------------GAAGTCG.......................................................................2243.751501500000000
..................................................................................................................CACATTGACTC-------------------------GAAGTCGAGCA----TCA---------G..................................................2643.751501000000500
...............................................................................................................CGGCACATTGACTC-------------------------GAAGTCGAGC....................................................................2443.501401000001120
...........................................................................................................CTCTCGGCACATTGACTC-------------------------GAAGTCGA......................................................................2633.331001000000000
..........................................................................................................TCTCTCGGCACATTGACTC-------------------------GAAGTCGA......................................................................2733.331001000000000
.........................................................................................................................................................................................................CCTGG-TCTGGCTCC-----AGCTCGT2183.252602600000000
...............................................................................................................CGGCACATTGACTC-------------------------GAAGTCGAGCA----...............................................................2543.25130910101100
.................................................................................................TG-AGACTCTCTCTCGGCACATTGACT........................................................................................................2653.201601500000100
.....................................................................................................................................................................TCA---------GTTCTGTGTCTGAGGAGAAGCCT............................2613.0031010000010
.....................................................................................................................................................................TCA---------GTTCTGTGTCTGAGGAGAAGC..............................2413.0030100000020
.........................................................................................................CTCTCTCGGCACATTGACTC-------------------------GAAG..........................................................................2433.0090900000000
......................................................................................................................................................................CA---------GTTCTGTGTCTGAGGAGAAGC..............................2313.0030000000120
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAGA....................................................................2753.001501500000000
..............................................................................................................TCGGCACATTGACTC-------------------------GAAGTCGAG.....................................................................2442.751101100000000
..................................................................................................................CACATTGACTC-------------------------GAAGTCGAGCA----TCA---------...................................................2542.75110300000620
................................................TTCAAGATTCTCCACCACCGTGA.............................................................................................................................................................2372.711901700000200
............................................................................................................TCTCGGCACATTGACTC-------------------------GA............................................................................1932.6780800000000
............................................................................................................TCTCGGCACATTGACTC-------------------------G.............................................................................1832.6780100000520
........................................................................................................................................................................................................TCCTGG-TCTGGCTCC-----AGCTA..2082.632102100000000
..................................................................................................................CACATTGACTC-------------------------GAAGTCGAGC....................................................................2142.501001000000000
.....................................................................................T-------CATCTG-AGACTCTCTCTCGGCA................................................................................................................2322.5050500000000
.................................................TCAAGATTCTCCACCACCGTGA.............................................................................................................................................................2282.381901900000000
........................................................................................................................................................................................................TCCTGG-TCTGGCTCC-----AGCTCGA2282.381901610000200
...........................................................................................................CTCTCGGCACATTGACTC-------------------------GAAG..........................................................................2232.3370700000000
..............................................TCTTCAAGATTCTCCACCACCGTGA.............................................................................................................................................................2572.291601600000000
..................................................................................................................CACATTGACTC-------------------------GAAGTCGAGCA----TC.............................................................2442.2590600000120
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGTCGT......................................................................2442.2590900000000
..............................................................................................................TCGGCACATTGACTC-------------------------GAAGTC........................................................................2142.0080800000000
...........................................................................................................CTCTCGGCACATTGACTC-------------------------GAAGTC........................................................................2432.0060510000000
.............................................................................................CATCTG-AGACTCTCTCTCGGCAC...............................................................................................................2322.0040400000000
.................................................TCAAGATTCTCCACCACCGTGATGCC.........................................................................................................................................................2612.0020200000000
.............................................................................................CATCTG-AGACTCTCTCTCGGCACAT.............................................................................................................2522.0040400000000
.................................................................................................................GCACATTGACTC-------------------------GAAGTCGAGCA----...............................................................2342.0080700000100
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGTCT.......................................................................2342.0080800000000
........................................................................................................................................................................................GTCTGAGGAGAAGCCTTCCTGG-TC...................2412.0020200000000
.TTTGA-A-------------------GGATCCT----TAGGACCATC....................................................................................................................................................................................23101.901907000001110
.................................................................................................TG-AGACTCTCTCTCGGCACATTGAC.........................................................................................................2551.8090810000000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAAA....................................................................2751.8090810000000
........................................................................................................................................................................................................TCCTGG-TCTGGCTCC-----AGC....1881.75140610000700
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAT.....................................................................2641.7570600100000
..............................TCCT----TAGGACCATCTTCAAGATTC..........................................................................................................................................................................2481.751401220000000
........................................................................................................TCTCTCTCGGCACATTGACTC-------------------------GAAGTC........................................................................2731.6750320000000
.......................................................................................................CTCTCTCTCGGCACATTGACTC-------------------------GAAG..........................................................................2631.6750300000200
................................................TTCAAGATTCTCCACCACCGTGATG...........................................................................................................................................................2571.571101000100000
.........................................................................................................................................................................................................CCTGG-TCTGGCTCC-----AGCTCG.2081.501201200000000
.....................................................................................T-------CATCTG-AGACTCTCTCTCGGCACA..............................................................................................................2521.5030200000100
.TTTGA-A-------------------GGATCCT----TAGGACCATCTTCAA...............................................................................................................................................................................28101.501503000001110
...........................................................................CGCGTCCGAGT-------CATCTG-AGACTCTCTC......................................................................................................................2721.5030300000000
...............................................................................TCCGAGT-------CATCTG-AGACTCTCTCTCG...................................................................................................................2621.5030300000000
.................................................................................................TG-AGACTCTCTCTCGGCACATTGA..........................................................................................................2451.4070400000300
..................................................CAAGATTCTCCACCACCGTGATG...........................................................................................................................................................2381.381101000000010
.........................................................................................................CTCTCTCGGCACATTGACTC-------------------------GAAGTC........................................................................2631.3340400000000
...........................................................................................................CTCTCGGCACATTGACTC-------------------------GAAGTCGAG.....................................................................2731.3340400000000
...........................................................................................................CTCTCGGCACATTGACTC-------------------------GAAGT.........................................................................2331.3340400000000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGG......................................................................2531.3340400000000
...............................................................................................................CGGCACATTGACTC-------------------------GAAGTCGAGCA----TC.............................................................2741.2550000000500
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAG..........................................................................2041.2550500000000
..................................................................................................................CACATTGACTC-------------------------GAAGTCGAG.....................................................................2041.2550410000000
...............................................................................................................CGGCACATTGACTC-------------------------GAAGTCG.......................................................................2141.2550500000000
...........................................................................................................................................................................................TGAGGAGAAGCCTTCCTGG-TCTGGC...............2561.1770610000000
..............................TCCT----TAGGACCATCTTCAAGATTCT.........................................................................................................................................................................2581.1390900000000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAGT....................................................................2731.0030000100200
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCA.......................................................................2431.0030300000000
.......................................................................................................................................................................A---------GTTCTGTGTCTGAGGAG..................................1811.0010000000010
..............................................................................................................TCGGCACATTGACTC-------------------------GAAG..........................................................................1941.0040400000000
.......................................................................................................................................................................................TGTCTGAGGAGAAGCCTTCCTGG-TC...................2511.0010000100000
...................................................................................AGT-------CATCTG-AGACTCTCTCTCGGCAC...............................................................................................................2621.0020200000000
..........................................................................CCGCGTCCGAGT-------CATCTG-AGACT...........................................................................................................................2321.0020200000000
.....................................................................................T-------CATCTG-AGACTCTCTCTCGGCACT..............................................................................................................2521.0020200000000
......................................................................................................................................................................CA---------GTTCTGTGTCTGAGGAGAAG...............................2211.0010000000010
.......................................................................................................................................................................................TGTCTGAGGAGAAGCCTTCCTG.......................2211.0010100000000
..................................................CAAGATTCTCCACCACCGTGATGCC.........................................................................................................................................................2511.0010100000000
......................................................................................................................................................................CA---------GTTCTGTGTCTGAGGAGAAGCC.............................2411.0010000000100
.....................................................................................T-------CATCTG-AGACTCTCTCTCG...................................................................................................................2021.0020200000000
...............................................................................................................CGGCACATTGACTC-------------------------GAAGTCGA......................................................................2241.0040400000000
.....................................................................................................................................................................TCA---------GTTCTGTGTCTGAGGAGAAG...............................2311.0010000000010
...............................................................CACCGTGATGCCCGCGTCCGAGT-------.......................................................................................................................................2311.0010100000000
...........................................................................CGCGTCCGAGT-------CATCTG-AGACTCT.........................................................................................................................2421.0020200000000
...................................................................................................................................................................................TCTGTGTCTGAGGAGAAGCCT............................2111.0010100000000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAC.....................................................................2631.0030210000000
........................................................................................................................................................................................GTCTGAGGAGAAGCCTTCCTGG-TCT..................2511.0010100000000
.....................................................................................................................................................................................TGTGTCTGAGGAGAAGCCTTCCTGG-TC...................2711.0010000001000
...........................................................................CGCGTCCGAGT-------CATCTG-AGACTC..........................................................................................................................2321.0020200000000
..................................................................................GAGT-------CATCTG-AGACTCTCTCTCGGCA................................................................................................................2621.0020200000000
...............................................................................TCCGAGT-------CATCTG-AGACTCTCTCTC....................................................................................................................2521.0020200000000
....................................................................................................................................................................................CTGTGTCTGAGGAGAAGCCTT...........................2111.0010100000000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAGCT----...............................................................2831.0030300000000
..........................................................................CCGCGTCCGAGT-------CATCTG-AGACTCTC........................................................................................................................2621.0020200000000
...............................................................CACCGTGATGCCCGCGTCCGAGT-------C......................................................................................................................................2411.0010100000000
........................................................................................................TCTCTCTCGGCACATTGACTC-------------------------GAAGT.........................................................................2631.0030210000000
......................................TAGGACCATCTTCAAGATTCTCCACC....................................................................................................................................................................2680.8870610000000
.........................................................................................................................................................................................TCTGAGGAGAAGCCTTCCTGG-TCT..................2460.8350320000000
...........................................................................................................................................................................................TGAGGAGAAGCCTTCCTGG-TCTG.................2360.8350400000100
.......................................................................................................................................................................................................TTCCTGG-TCTGGCTCC-----AGCTCG.2280.7560600000000
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGTCGAA.....................................................................2540.7530300000000
..............................................................................................................TCGGCACATTGACTC-------------------------GAAGT.........................................................................2040.7530300000000
..................................................................................................................CACATTGACTC-------------------------GAAGTCGAGCA----TCA---------A..................................................2640.7530200000010
.................................................................................................................GCACATTGACTC-------------------------GAAGTCGAGC....................................................................2240.7530100000200
...................................................................................................................ACATTGACTC-------------------------GAAGTCGAGCA----...............................................................2140.7530300000000
.................................................................................................................GCACATTGACTC-------------------------GAAGTCGAGCA----T..............................................................2440.7530000000300
.TTTGA-A-------------------GGATCCT----TAGGACCATCTT..................................................................................................................................................................................25100.7070600000100
..TTGA-A-------------------GGATCCT----TAGGACCATCT...................................................................................................................................................................................23100.7070700000000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCC.......................................................................2430.6720200000000
...........................................................................................................CTCTCGGCACATTGACTC-------------------------GAAGTCGT......................................................................2630.6720200000000
..............................................................................................ATCTG-AGACTCTCTCTCGGCAC...............................................................................................................2230.6720200000000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGAGCA----TTG---------A..................................................3230.6720000000200
..........................................................................................................TCTCTCGGCACATTGACTC-------------------------GTT...........................................................................2230.6720000000020
.........................................................................................................................................................................................TCTGAGGAGAAGCCTTCCTG.......................2060.6740400000000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGTA.....................................................................2630.6720200000000
..........................................................................................................TCTCTCGGCACATTGACTC-------------------------GAAGTCGAG.....................................................................2830.6720200000000
.........................................................................................................................................................................................TCTGAGGAGAAGCCTTCCTGG-TC...................2360.6740300100000
...........................................................................................................CTCTCGGCACATTGACTC-------------------------GAAGTCGAGCA----...............................................................2930.6720200000000
..........................................................................................................TCTCTCGGCACATTGACTC-------------------------GA............................................................................2130.6720200000000
..........................................................................................................TCTCTCGGCACATTGACTC-------------------------GAAGTCGT......................................................................2730.6720200000000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAA...........................................................................2030.6720200000000
.........................................................................................................CTCTCTCGGCACATTGACTC-------------------------GAAGTCGAGC....................................................................3030.6720000000200
.........................................................................................................................................................................................................CCTGG-TCTGGCTCC-----AGCTC..1980.6350500000000
..................................................CAAGATTCTCCACCACCGTGA.............................................................................................................................................................2180.6350500000000
........................................................................................................................................................................................................TCCTGG-TCTGGCTCC-----AGCTCT.2180.6350400000100
.......................................................................................................................................................................................................TTCCTGG-TCTGGCTCC-----AGCTC..2180.6350410000000
.................................................................................................TG-AGACTCTCTCTCGGCACATTG...........................................................................................................2350.6030300000000
...............................................................................................TCTG-AGACTCTCTCTCGGCACATTGACTC-------------------------..............................................................................2950.6030210000000
.TTTGA-A-------------------GGATCCT----TAGGACC.......................................................................................................................................................................................20110.5560400000200
..................................................................................GAGT-------CATCTG-AGACTCTCTCTCGG..................................................................................................................2420.5010100000000
................................................................................................................GGCACATTGACTC-------------------------GAAGTCGA......................................................................2140.5020200000000
.....................................................................................T-------CATCTG-AGACTCTCTCTCGGC.................................................................................................................2220.5010100000000
.......................................................................................................................TGACTC-------------------------GAAGTCGAGCA----TCA---------GT.................................................2240.5020200000000
........................................................................................................................................................................................................TCCTGG-TCTGGCTCC-----AGCTAA.2180.5040400000000
............................................................................GCGTCCGAGT-------CATCTG-AGACTCTCT.......................................................................................................................2520.5010100000000
ATTTGA-A-------------------GGATCCT----TAGGACCATCT...................................................................................................................................................................................25100.5050500000000
............................................................................................................TCTCGGCACATTGACTC-------------------------GAAGTCGTT.....................................................................2640.5020200000000
.............................................................................CGTCCGAGT-------CATCTG-AGACTCTC........................................................................................................................2320.5010100000000
.....................................................................................T-------CATCTG-AGACTCTCTCTCGGCAA...............................................................................................................2420.5010100000000
..........................................................................CCGCGTCCGAGT-------CATCTG-AGAC............................................................................................................................2220.5010010000000
...............................................................................................................CGGCACATTGACTC-------------------------GAAGTC........................................................................2040.5020200000000
..............................................................................................................TCGGCACATTGACTC-------------------------GAAGTCGAGCA----TC.............................................................2840.5020100000100
................................................................................................................GGCACATTGACTC-------------------------GAAGTCG.......................................................................2040.5020200000000
...............................................................................................................CGGCACATTGACTC-------------------------GAAGT.........................................................................1940.5020200000000
.........................................................................................................................................................................................TCTGAGGAGAAGCCTTCCTGG-TCTG.................2560.5030300000000
...................................................................................................................ACATTGACTC-------------------------GAAGTCGAGCA----TCA---------GTA................................................2740.5020000000200
.............................................................................................CATCTG-AGACTCTCTCTCGGC.................................................................................................................2120.5010100000000
...........................................................................CGCGTCCGAGT-------CATCTG-AGACTCTCT.......................................................................................................................2620.5010100000000
...................................................................................AGT-------CATCTG-AGACTCTCTCTCGGCA................................................................................................................2520.5010100000000
......................................................................................................................................................................................................CTTCCTGG-TCTGGCTCC-----AGCTCG.2380.5040400000000
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAGTCTC......................................................................2440.5020200000000
...................................................................................................................ACATTGACTC-------------------------GAAGTCGAGCA----T..............................................................2240.5020200000000
........................................................................................................................................................................................................TCCTGG-TCTGGCTCC-----AGCTCGC2280.5040220000000
..............................................................................................................TCGGCACATTGACTC-------------------------GAAGTCGAGCA----A..............................................................2740.5020200000000
...............................................................................TCCGAGT-------CATCTG-AGACTCTCT.......................................................................................................................2220.5010100000000
..........................................................................CCGCGTCCGAGT-------CATCTG-AGACTCT.........................................................................................................................2520.5010100000000
...................................................................................AGT-------CATCTG-AGACTCTCTCTC....................................................................................................................2120.5010100000000
...................................................................................AGT-------CATCTG-AGACTCTCTCTCGGC.................................................................................................................2420.5010100000000
..........................................................................CCGCGTCCGAGT-------CATCTG-AGACTCTCTC......................................................................................................................2820.5010100000000
...............................................................................TCCGAGT-------CATCTG-AGACTCTCTC......................................................................................................................2320.5010100000000
...................................................................................AGT-------CATCTG-AGACTCTCTCTCGGCACAT.............................................................................................................2820.5010100000000
.............................................................................................................CTCGGCACATTGACTC-------------------------GAAA..........................................................................2040.5020200000000
.............................................................................................................CTCGGCACATTGACTC-------------------------GA............................................................................1840.5020200000000
.....................................................................................T-------CATCTG-AGACTCTCTCTCGGCACATTGA..........................................................................................................2920.5010100000000
droPer2
GCTTGG-GGAGCCACCT---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGGAAGTACGGCCGAAGCC--CATTCCACCTTCTTCAGCCATTCGGCTGATGGGCTGGCTTCACTGCT----GGCGTGTTGCCGACGGAGTA---------TGTG-CCCTGCACTCCTCTTTT-----CGGCATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................T---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGG....................................................................................................................................26206.5513101310000
................T---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCG.....................................................................................................................................25201.95390380100
...................................................................................................................ATTCCACCTTCTTCAGCCATTCGGC........................................................................................25131.00130130000
................T---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCC......................................................................................................................................24200.85174130000
................T---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGGA...................................................................................................................................2780.504220000
....................TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGG....................................................................................................................................25200.459090000
.......................TCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGGAAG.................................................................................................................................2590.444040000
...................................................................................................................ATTCCACCTTCTTCAGCCATTCGG.........................................................................................24130.385050000
...............................................................................................................................................................................CGACGGAGTA---------TGTG-CCCTGCACTC...................24200.357007000
.........................................................................................................................................................TCACTGCT----GGCGTGTTGCCGA..................................................21200.306060000
...............................................................................................................................................................................CGACGGAGTA---------TGTG-CCCTGCACT....................23200.255050000
................T---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACT........................................................................................................................................22200.255050000
........................................................................................................................................................TTCACTGCT----GGCGTGTTGCCGACGGT..............................................26200.255050000
...................................TAAGG----TGA------------------------------------------ACTCCGGAAGTACGGCC..........................................................................................................................2590.222200000
........................................................................................................................................................TTCACTGCT----GGCGTGTTGCCGACG................................................24200.204004000
.......................................................................................................................................................CTTCACTGCT----GGCGTGTTGCCGA..................................................23200.204040000
...............................................................................................................................................................................CGACGGAGTA---------TGTG-CCCTGCACTCCT.................26200.153030000
................T---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTC.......................................................................................................................................23200.153030000
...............CT---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGG....................................................................................................................................27200.153030000
.......................................................................................................................................TCGGCTGATGGGCTGGCTTCACTG.....................................................................24200.153030000
.......................................................................................................................................................CTTCACTGCT----GGCGTGTTGCCGACG................................................25200.153030000
.......................................................................................................................................................................................TA---------TGTG-CCCTGCACTCCTCTTTT-----CGG....26200.153030000
....................TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGGA...................................................................................................................................2680.131010000
.....................TTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGGA...................................................................................................................................2580.131010000
........................CTG-----TTCTAAGG----TGA------------------------------------------ACTCCGGAAG.................................................................................................................................2490.111010000
.......................TCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGGAA..................................................................................................................................2490.111010000
...................................TAAGG----TGA------------------------------------------ACTCCGGAAGTACG.............................................................................................................................2290.111010000
....................................................................................................................................................TGGCTTCACTGCT----GGCGTGTTGCCGA..................................................26200.102020000
...............................................................................................................................................TGGGCTGGCTTCACTGCT----GGCGT..........................................................23200.102020000
.........................................................................................................................................................TCACTGCT----GGCGTGTTGCCGACT................................................23200.102020000
................................................................................................................................................................................GACGGAGTA---------TGTG-CCCTGCACTCCTC................26200.102020000
...............................................................................................................................................................................CGACGGAGTA---------TGTG-CCCTGCACTT...................24200.102200000
....................TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCG.....................................................................................................................................24200.102020000
............................................................................................................................................TGATGGGCTGGCTTCACTGCT----GG.............................................................23200.102020000
.......................................................................................................................................................................................TA---------TGTG-CCCTGCACTCCTCTTTT-----CGGCA..28200.102020000
................T---TTTTCTG-----TTCTAAGG----TGA------------------------------------------AC.........................................................................................................................................21200.102020000
.........................................................................................................................................................TCACTGCT----GGCGTGTTGCCG...................................................20200.102020000
............................................................................................................................................................................TGCCGACGGAGTA---------TGTG-CCCTGC.......................23200.102020000
GCTTGG-GGAGCCACCT---TTTTCTG-----TTC.................................................................................................................................................................................................26200.102020000
.......................................................................................................................................TCGGCTGATGGGCTGGCTTCAC.......................................................................22200.102020000
............................................TGA------------------------------------------ACTCCGGAAGTACGGCC..........................................................................................................................20120.081010000
......................................GG----TGA------------------------------------------ACTCCGGAAGTACGGCCGAAG......................................................................................................................26120.081000001
............................................TGA------------------------------------------ACTCCGGAAGTACGGCCGA........................................................................................................................22120.081010000
.....................................................................................................................TCCACCTTCTTCAGCCATTCGGC........................................................................................23130.081010000
.................................................................................................................................AGCCATTCGGCTGATGGGC................................................................................19130.081010000
....................................................................................................................TTCCACCTTCTTCAGCCATTCGG.........................................................................................23130.081010000
..................................................................................................................CATTCCACCTTCTTCAGCCATTCGGCT.......................................................................................27130.081010000
....................................................................................................................................CATTCGGCTGATGGGCTGGCT...........................................................................21130.081100000
.................................................................................................AGTACGGCCGAAGCC--CATTCCACC.........................................................................................................24130.081010000
...............................................................................................................................TCAGCCATTCGGCTGATGGGCTGGCT...........................................................................26130.081010000
..............CCT---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGG....................................................................................................................................28200.051010000
........................................................................................................................................CGGCTGATGGGCTGGCTTCAA.......................................................................21200.051010000
................T---TTTTCTG-----TTCTAAGG----TG......................................................................................................................................................................................18200.051100000
................T---TTTTCTG-----TTCTAAGG----TGA------------------------------------------A..........................................................................................................................................20200.051000001
........................CTG-----TTCTAAGG----TGA------------------------------------------ACTCCGG....................................................................................................................................21200.051010000
.....................................................................................................................................................GGCTTCACTGCT----GGCGTGTTGCCGA..................................................25200.051010000
.....................TTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCG.....................................................................................................................................23200.051100000
................................................................................................................................................................................GACGGAGTA---------TGTG-CCCTGCACTC...................23200.051100000
................T---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGT....................................................................................................................................26200.051010000
.....................TTTCTG-----TTCTAAGG----TGA------------------------------------------ACTC.......................................................................................................................................21200.051010000
.......................................................................................................................................TCGGCTGATGGGCTGGCTTCACTA.....................................................................24200.051010000
......................TTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGG....................................................................................................................................23200.051010000
....................................................................................................ACGGCCGAAGCC--CATTCCACCT........................................................................................................22200.051010000
.......................................................................................................................................TCGGCTGATGGGCTGGCTTC.........................................................................20200.051010000
....................................................................................................................................................TGGCTTCACTGCT----GGCGTGTT.......................................................21200.051010000
.......................................................................................................................................................CTTCACTGCT----GGCGTGTTGCCGACAA...............................................26200.051010000
............CACCT---TTTTCTG-----TTCTAAGG----TGA------------------------------------------AC.........................................................................................................................................25200.051010000
.............................................................................................................................................GATGGGCTGGCTTCACTGCT----GGCGT..........................................................25200.051010000
.......................................................................................................................................................CTTCACTGCT----GGCGTGTTG......................................................19200.051010000
...TGG-GGAGCCACCT---TTTTCTG-----TTCTAAGG----........................................................................................................................................................................................28200.051010000
.......................................................................................................................................................................................TA---------TGTG-CCCTGCACTCCTCTTTT-----CGGC...27200.051010000
................................................................................................................................................................................GACGGAGTA---------TGTG-CCCTGCACT....................22200.051001000
.........................TG-----TTCTAAGG----TGA------------------------------------------ACTCCGG....................................................................................................................................20200.051010000
........................................................................................................................................................TTCACTGCT----GGCGTGTTGCCGT..................................................22200.051010000
...TGG-GGAGCCACCT---TTTTCTG-----TTCTAAG.............................................................................................................................................................................................27200.051010000
..........................................................................................................................................GCTGATGGGCTGGCTTCACTGCT----G..............................................................24200.051010000
........................................................................................................................................................TTCACTGCT----GGCGTGTTGT.....................................................19200.051010000
................T---TTTTCTG-----TTCTAAGG----TGA------------------------------------------ACTCCGA....................................................................................................................................26200.051010000
........................................................................................................................................................TTCACTGCT----GGCGTGTTGCCGAAA................................................24200.051010000
............................................................................................................................................................................TGCCGACGGAGTA---------TGTG-CCCTGCACTC...................27200.051001000
droVir3
AATTGC-CTCTGCGTGC---TTGATGG-----TTTTTCGC----TGA------------------------------------------AGCTTTGGTGCACACTCCGGGCC--CATTTAATTTTTTTCAGCCAGTCTGCTGATTGATTGGCCGTTCTGCA----CGCGTTCTGCCAAAGAAGGA---------TATG-CTCTGCGCTCTTTTTCT-----CCCAATASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................TCTGCTGATTGATTGGCCGTTCTG.....................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................GCCAAAGAAGGA---------TATG-CTCTGC.......................2211.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AAAGAAGGA---------TATG-CTCTG........................1811.001000000000000000000000001000000000000000000000000000000000000000
droMoj3
GTCCTC-T-------------------GGACT-TGCTGCC----CAA------------------------------------------AATTCGGAAACACCGTATTCGCC--CATTCAAGTTTCTTCAGCCAGGCAGCCGATGGGTTGGTTATATTGCT----AGTCCTTTGATGCTTTAATA---------TACT-GCTAGCTTTTCTTTTCT-----CTTCGTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTGGGT-G-------------------GT----GCTTTAC----TGA------------------------------------------ACTTTGGCAGCACCTTTTTGGCC--CACGCCACCTTGTTCCGCCATTCGGCTAGTGGGGTGGCCGCCGCATT----CGCGTTCTGCCGCTTTAGAA---------TGCT-TGCTGCATTTCTCCTCT-----CGGCATASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
ATCTGC-A-------------------GGAATGT----CAGGGACATCCTTTAGATTCTCCACCACAGTAATCTCCGCCTCGGTGTCGGAGCCCAGCAA-AGAGTCCTCCTC--CATGCCGACGCCACCAAGAGCCCTCGC---------CAG--GTCACTCTCC--------------------TCTGAGGTGTACCCTTCCAGAATGTCCTCCT-----CCACATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................A-AGAGTCCTCCTC--CATGCCGACGCC......................................................................................................25204.15830812000
..............................................................................................................TC--CATGCCGACGCCACCAAGAGCCCTCGC---------..............................................................................29202.10423930000
...............................TGT----CAGGGACATCCTTTAGATTCTCC.......................................................................................................................................................................26202.004002713000
..............................................................................................................TC--CATGCCGACGCCACCAAGAGCCCTC.........................................................................................27201.60323101000
..............................................................................................................TC--CATGCCGACGCCACCAAGAGCCC...........................................................................................25201.45292900000
..................................................................................................A-AGAGTCCTCCTC--CATGCCGACGCCAC....................................................................................................27201.402816120000
................................................................................................CAA-AGAGTCCTCCTC--CATGCCGACGC.......................................................................................................26201.352713131000
..................................................TTAGATTCTCCACCACAGTAATCTCC........................................................................................................................................................2631.334400000
...............................................................................TCGGTGTCGGAGCCCAGCAA-AGAGTCC.........................................................................................................................27201.25252500000
..................................................................................................A-AGAGTCCTCCTC--CATGCCGACGC.......................................................................................................24200.95190181000
..................................................................................................A-AGAGTCCTCCTC--CATGCCGACGCCA.....................................................................................................26200.85171070000
................................................................................................CAA-AGAGTCCTCCTC--CATGCCGACGCC......................................................................................................27200.80160160000
..............................................................................................................TC--CATGCCGACGCCACCAAGAGCCCTCG........................................................................................28200.70141300010
..................................................TTAGATTCTCCACCACAGTAATCTCCGC......................................................................................................................................................2830.672200000
..................................................TTAGATTCTCCACCACAGTAATCTCCG.......................................................................................................................................................2730.672200000
...............................................................................................GCAA-AGAGTCCTCCTC--CATGCCGACGCC......................................................................................................28200.6513580000
...............................................................................................GCAA-AGAGTCCTCCTC--CATGCCGACGC.......................................................................................................27200.6513490000
...............................................................................TCGGTGTCGGAGCCCAGCAA-AGAGTC..........................................................................................................................26200.5511470000
...........................................................................................................TCCTC--CATGCCGACGCCACCAAGAGCC............................................................................................27200.55111100000
...............................................................................TCGGTGTCGGAGCCCAGCAA-AGAGT...........................................................................................................................25200.459450000
.................................................................................................AA-AGAGTCCTCCTC--CATGCCGACGCC......................................................................................................26200.459270000
...........................................................................................................TCCTC--CATGCCGACGCCACCAAGAG..............................................................................................25200.459720000
...............................................................................TCGGTGTCGGAGCCCAGCAA-AGAG............................................................................................................................24200.408602000
......................................................................................................................................CCCTCGC---------CAG--GTCACTCTCC--------------------TCTGAGG....................................27200.408800000
..............................................................................................................................ACCAAGAGCCCTCGC---------CAG--GTCACTCTC................................................................27200.408800000
................................................................................................................................CAAGAGCCCTCGC---------CAG--GTCACTCC.................................................................24200.357070000
....................................................AGATTCTCCACCACAGTAATCTCC........................................................................................................................................................2430.331100000
..................................................TTAGATTCTCCACCACAGTAATCTC.........................................................................................................................................................2530.331100000
...................................................TAGATTCTCCACCACAGTAATCTCC........................................................................................................................................................2530.331010000
..................................................TTAGATTCTCCACCACAGTAATCTCCGCC.....................................................................................................................................................2930.331010000
...................................................TAGATTCTCCACCACAGTAATCTCCGCC.....................................................................................................................................................2830.331100000
..................................................................................................................CATGCCGACGCCACCAAGAGCCCTCG........................................................................................26200.306600000
..............................................................................................................................ACCAAGAGCCCTCGC---------CAG--GTCACTC..................................................................25200.306006000
..................................................................................................A-AGAGTCCTCCTC--CATGCCGAC.........................................................................................................22200.306060000
................................................................................CGGTGTCGGAGCCCAGCAA-AGAGTCC.........................................................................................................................26200.255500000
...........................................................................................................................GCCACCAAGAGCCCTCGC---------CAG--GTCA.....................................................................25200.255410000
...............................TGT----CAGGGACATCCTTTAGATTCTCCAC.....................................................................................................................................................................28200.255050000
..................................................................................................................CATGCCGACGCCACCAAGAGCCCTCGC---------C.............................................................................28200.255500000
...............................................................................................GCAA-AGAGTCCTCCTC--CATGCCGAC.........................................................................................................25200.255140000
..................................................................................................................CATGCCGACGCCACCAAGAGCCCTC.........................................................................................25200.255500000
...........................................................................................................TCCTC--CATGCCGACGCCACCAAGAGC.............................................................................................26200.204040000
..............................................................................................................TC--CATGCCGACGCCACCAAGAGC.............................................................................................23200.204040000
............................................................................GCCTCGGTGTCGGAGCCCAGCAA-AG..............................................................................................................................25200.204220000
.............................................................................................CAGCAA-AGAGTCCTCCTC--CATGCCGA..........................................................................................................26200.153300000
..................................................................................................A-AGAGTCCTCCTC--CATGCCGACGCCACC...................................................................................................28200.153030000
............................................................................................................CCTC--CATGCCGACGCCACCAAGAGCC............................................................................................26200.153300000
................................................................................CGGTGTCGGAGCCCAGCAA-AGAGTC..........................................................................................................................25200.153111000
....................................................................................................AGAGTCCTCCTC--CATGCCGACGCCA.....................................................................................................25200.153300000
................................................................................................................................CAAGAGCCCTCGC---------CAG--GTCACTCTC................................................................25200.153300000
.........................................................................................................................................TCGC---------CAG--GTCACTCTCC--------------------TCTGAGGTGT.................................27200.153300000
................................................................................................CAA-AGAGTCCTCCTC--CATGCCGAC.........................................................................................................24200.153030000
..............................................................................................................................ACCAAGAGCCCTCGC---------CAG--GTCACTCTCC--------------------...........................................28200.153030000
...................................................................................................................................GAGCCCTCGC---------CAG--GTCACTCTCC--------------------TCT........................................26200.153300000
.........................................................................TCCGCCTCGGTGTCGGAGCCCAGC...................................................................................................................................24200.153300000
.............................AATGT----CAGGGACATCCTTTAGATT...........................................................................................................................................................................24200.102020000
.................................................................................................AA-AGAGTCCTCCTC--CATGCCGACGCCA.....................................................................................................27200.102110000
.................................................................................................................................AAGAGCCCTCGC---------CAG--GTCACTCTCC--------------------...........................................25200.102020000
.............................................................................................................................CACCAAGAGCCCTCGC---------CAG--GTCACTCT.................................................................27200.102020000
......................................................................................................................CCGACGCCACCAAGAGCCCTCGC---------CAG--G........................................................................27200.102200000
.............................................................................CCTCGGTGTCGGAGCCCAGCAA-AGAG............................................................................................................................26200.102200000
..................................................................................................................CATGCCGACGCCACCAAGAGCCCTCGC---------..............................................................................27200.102020000
...............................................................................................................................CCAAGAGCCCTCGC---------CAG--GTCACTC..................................................................24200.102020000
ATCTGC-A-------------------GGAATGT----CAGGGACATC....................................................................................................................................................................................24200.102200000
.................................................................................................AA-AGAGTCCTCCTC--CATGCCGACGCCAC....................................................................................................28200.102020000
...............................................................................TCGGTGTCGGAGCCCAGCAA-AGA.............................................................................................................................23200.102110000
...........................................................................................CCCAGCAA-AGAGTCCTCCTC--CATGC.............................................................................................................25200.102020000
...........................................................................................................TCCTC--CATGCCGACGCCACCAAG................................................................................................23200.102200000
...........................................................................CGCCTCGGTGTCGGAGCCCAGCAA-AGAG............................................................................................................................28200.102200000
............................................................................................................CCTC--CATGCCGACGCCACCAAGAGC.............................................................................................25200.102200000
.............................................................................................CAGCAA-AGAGTCCTCCTC--CATGCCGAC.........................................................................................................27200.102110000
................................................................................................CAA-AGAGTCCTCCTC--CATGC.............................................................................................................20200.102200000
..................................................................................................................CATGCCGACGCCACCAAGAGCCCT..........................................................................................24200.102020000
...................................................................................TGTCGGAGCCCAGCAA-AGAGTCCTCCTC--..................................................................................................................28200.102200000
..........................................GACATCCTTTAGATTCTCCACCACAG................................................................................................................................................................26200.102200000
...................................................................................................................................GAGCCCTCGC---------CAG--GTCACTCTCC--------------------TC.........................................25200.102200000
....................................................................................................................TGCCGACGCCACCAAGAGCCCTCGC---------C.............................................................................26200.102200000
................................................................................................................................................................TCTCC--------------------TCTGAGGTGTACCCTTCCAG.......................25200.051100000
............................GAATGT----CAGGGACATCCTTTAGATT...........................................................................................................................................................................25200.051010000
................................................................................................CAA-AGAGTCCTCCTC--CATGCCG...........................................................................................................22200.051100000
..................................................................................................A-AGAGTCCTCCTC--CATGCCGACGCCAA....................................................................................................27200.051100000
...................................................................................TGTCGGAGCCCAGCAA-AGAGTCCT........................................................................................................................24200.051010000
.....................................................................................TCGGAGCCCAGCAA-AGAGTCCC........................................................................................................................22200.051010000
..........................................................................................................................CGCCACCAAGAGCCCTCGC---------CAG--GTC......................................................................25200.051010000
.TCTGC-A-------------------GGAATGT----CAGGGACATCCT..................................................................................................................................................................................25200.051100000
................................................................................CGGTGTCGGAGCCCAGCAA-AGAGTCCTC.......................................................................................................................28200.051100000
.............................AATGT----CAGGGACATCCTTTAGATTCTCC.......................................................................................................................................................................28200.051010000
.................................................................................................AA-AGAGTCCTCCTC--CATGCCGACG........................................................................................................24200.051100000
...............................................................................................GCAA-AGAGTCCTCCTC--CATGCCG...........................................................................................................23200.051100000
.............................................................................................................................CACCAAGAGCCCTCGC---------CAG--GTCACT...................................................................25200.051010000
..........................................................................................................................................CGC---------CAG--GTCACTCTCC--------------------TCTGAGGTGTA................................27200.051100000
.................................................................................GGTGTCGGAGCCCAGCAA-AGAGTC..........................................................................................................................24200.051100000
..........................................GACATCCTTTAGATTCTCCACCACA.................................................................................................................................................................25200.051010000
....................................................................................GTCGGAGCCCAGCAA-AGAGTCCTCC......................................................................................................................25200.051100000
..............................................................................................................................ACCAAGAGCCCTCGC---------CAG--G........................................................................19200.051100000
....................................................................................................................................AGCCCTCGC---------CAG--GTCACTCTCC--------------------TCTGAG.....................................28200.051010000
..............................................................................................................................ACCAAGAGCCCTCGC---------CAG--GTCAC....................................................................23200.051100000
......................................................................................................................................CCCTCGC---------CAG--GTCACTCTCC--------------------TCTGA......................................25200.051010000
........................................................................................................TCCTCCTC--CATGCCGACGCCACCAAGAGC.............................................................................................29200.051100000
..............................................................................................................TC--CATGCCGACGCCACCAAGA...............................................................................................21200.051100000
...............................TGT----CAGGGACATCCTTTAGATTCTCCACA....................................................................................................................................................................29200.051100000
.....................................................................................TCGGAGCCCAGCAA-AGAGTCCTCCTC--..................................................................................................................26200.051010000
............................................................................GCCTCGGTGTCGGAGCCCAGCAA-AGA.............................................................................................................................26200.051100000
.....................................................................................................................................GCCCTCGC---------CAG--GTCACTCTCC--------------------TCTGAC.....................................27200.051010000
.....................................................................................................................GCCGACGCCACCAAGAGCCCTCGC---------CAG--.........................................................................27200.051100000
.................................................................................................AA-AGAGTCCTCCTC--CATGCCGACGCCACC...................................................................................................29200.051010000
..........................................................................................................................................CGC---------CAG--GTCACTCTCC--------------------TCTGAGGTG..................................25200.051100000
...........................................................................................CCCAGCAA-AGAGTCCTCCTC--CATG..............................................................................................................24200.051100000
.............................................................................................CAGCAA-AGAGTCCTCCTC--CATG..............................................................................................................22200.051010000
..........................................GACATCCTTTAGATTCTCCACCACAGTA..............................................................................................................................................................28200.051100000
..........................................GACATCCTTTAGATTCTCCACCACAGT...............................................................................................................................................................27200.051100000
............................................CATCCTTTAGATTCTCCACCACAGTAA.............................................................................................................................................................27200.051100000
..................................................TTAGATTCTCCACCACAGTA..............................................................................................................................................................20200.051010000
...................................................................................TGTCGGAGCCCAGCAA-AGAGTCCTCCT.....................................................................................................................27200.051100000
............................................................................................CCAGCAA-AGAGTCCTCCTC--CATGCC............................................................................................................25200.051010000
......................................................................................................................................................................................................CTTCCAGAATGTCCTCCT-----CCACAT.24200.051010000
.....................................................................................................................GCCGACGCCACCAAGAGCCCTCGC---------CA............................................................................26200.051000010
................................................................................................................................CAAGAGCCCTCGC---------CAG--GTCACTC..................................................................23200.051100000
............................................................................................................................................C---------CAG--GTCACTCTCC--------------------TCTGAGGTGTAC...............................26200.051100000
...........................................................................................................TCCTC--CATGCCGACGCCACCA..................................................................................................21200.051100000
........................................................................................................................................CTCGC---------CAG--GTCACTCTCC--------------------...........................................18200.051100000
......................................................................................................................................CCCTCGC---------CAG--GTCACTCTCC--------------------TCTGAC.....................................26200.051010000
...................................................................................TGTCGGAGCCCAGCAA-AGAGTT..........................................................................................................................22200.051010000
.........................................................................TCCGCCTCGGTGTCGGAGCCCAGCAA-A...............................................................................................................................27200.051100000
.........................................................................................................................................TCGC---------CAG--GTCACTCTCC--------------------TCTGAG.....................................23200.051100000
.....................................................................................................GAGTCCTCCTC--CATGCCGACGC.......................................................................................................22200.051100000
................................................................................................CAA-AGAGTCCTCCTC--CATGCCGACGCCAC....................................................................................................29200.051100000
.................................................................................GGTGTCGGAGCCCAGCAA-AGAGTCCTCC......................................................................................................................28200.051100000
................................................................................................CAA-AGAGTCCTCCTC--CATGCCGACGCCA.....................................................................................................28200.051010000
.................................................................................................AA-AGAGTCCTCCTC--CATGCCGACGC.......................................................................................................25200.051010000
...........................................................................................................................GCCACCAAGAGCCCTCGC---------CAG--GTCACT...................................................................27200.051010000
............................................................................................................................CCACCAAGAGCCCTCGC---------CAG--GTCACTC..................................................................27200.051100000
................................................................................................CAA-AGAGTCCTCCTC--CATGCCGACG........................................................................................................25200.051001000
........................................................................................................................................................................................................TCCAGAATGTCCTCCT-----CCAC...20200.051010000
.....................................................................................TCGGAGCCCAGCAA-AGAGTCCTC.......................................................................................................................23200.051100000
...................................................................................TGTCGGAGCCCAGCAA-AGAGTC..........................................................................................................................22200.051100000
...............................................................................................................C--CATGCCGACGCCACCAAGAGCCC...........................................................................................24200.051010000
................................GT----CAGGGACATCCTTTAGATTCTCC.......................................................................................................................................................................25200.051010000
...............................................................................TCGGTGTCGGAGCCCAGCAA-AGAGTCA.........................................................................................................................27200.051100000
droBip1
ATTTGC-A-------------------GGATCGT----CAGGGACATCTTTACAATTCTCCACCACAGTAACTTTTGCCTCCGTTTCCGAGCTTAGCAG-AGAGTCCTCCTC--CATTCCGACTCCACTAAGTGCCCTTGC---------CAA--GTCGCTTTCC--------------------TCCGAGGTGTACCCTTCCAGGATGTCCTCCGGGTGCCCCTCTTSizeHit CountTotal NormTotal
No Reads
droEle1
TTGCTGTGCGCCCTCTGCACTCGGCCG-----TTTTTGGC----CTT------------------------------------------AGTTTGGGAGCACAGTCTTTGTC--CATTCCACCCTCTTCAACCATTCGGCTAAGGGATTGACAATCTTGCT----CCTTT--TGGGCTCAGAGTG---------ACTG-CGCAACATTCCGCTTCT-----ACGCATASizeHit CountTotal NormTotal
No Reads
droRho1
GCCTGA-GCACCTTCTTGTTGG-----GGCTTCTCTTGCC----CAT------------------------------------------AGTTGGGAAACACCGTCCTTGCC--CACTCTACCTTCTTTAGCCATTCGGGCGAAGGCGTGGCGACAGTGCT----TCTGGCATGTGAGCGCAGGG---------TTTG-GGCGGCAGTCCGTCTCT-----CTGCGTASizeHit CountTotal NormTotal
No Reads
droBia1
ATTTGC-A-------------------GAGGTCT----TAATATCTACAGCTGCAACCTCCACCACGGTCACATCGGCCTCTTTCG-------TAT-----------TCC-T--CAGATCCACGTCTTCGATTGCCGTTCC---------AAG----CGCTCGCAT------CA---TCGACGAA-----------TCAGTCGATTAGCCGTCCT-------CCGGCTSizeHit CountTotal NormTotal
No Reads
droTak1
GCTCGA-G-------------------GGCTTATCCTGCC----CAT------------------------------------------AGTTGGGAAGCACCAACTTTGCC--CACTCTACCTTCTTCAGCCATTCTGGCGAAGGTGTGGCAATGTTGCT----CCTTGCATGTGAGCGCAGAG---------TCTG-GGCGGCAGTCCGTCTTT-----CCGCGTASizeHit CountTotal NormTotal
No Reads
droYak3
GCTTTG-G-------------------GGGCT-TCCTTGC----CGA------------------------------------------AGTTTGGCAAAACGGTTCTTGCC--CATTCCACCTTCTTCATCCATTCAGCCGAAGGAGCCGTTTT---CGA----TATCTCCTGGCAGCGTAGGA---------TTTG-ACCTGCAGATCGTTTCT-----CTGCGTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................TT---CGA----TATCTCCTGGCAGCGTAGGA---------..................................25122.0022010000000021
.......................................................................................................................................................................TCTCCTGGCAGCGTAGGA---------TTTG-ACC..........................25115.0015001000000014
............................................................................................................................................................................TGGCAGCGTAGGA---------TTTG-ACCTGCA......................2418.00800000000008
........................................................................................................................................................TTT---CGA----TATCTCCTGGCAGCGTAGGA---------..................................2616.00600000000006
............................................................................................................................................................................TGGCAGCGTAGGA---------TTTG-ACCTGCAGAT...................2715.00500000000005
........................................................................................................................................................TTT---CGA----TATCTCCTGGCAGCGTAGG............................................2513.00302000100000
..........................................................................................................................................................T---CGA----TATCTCCTGGCAGCGTAGGA---------..................................2412.00200000000002
............................................CGA------------------------------------------AGTTTGGCAAAACGGTTCTTGC.....................................................................................................................2512.00202000000000
.........................................................................................................................................................TT---CGA----TATCTCCTGGCAGCGTAGGA---------T.................................2612.00201000000001
....................................................................................................................TTCCACCTTCTTCATCCATTCAGCCGA.....................................................................................2761.17707000000000
........................................................................................................................................................TTT---CGA----TATCTCCTGGCAGCGTAGGG---------..................................2611.00100000000001
........................................................................................................................................................................CTCCTGGCAGCGTAGGA---------TTTG-ACC..........................2411.00101000000000
............................................CGA------------------------------------------AGTTTGGCAAAACGGTTCTTG......................................................................................................................2411.00101000000000
.......................................................................................................................................................................TCTCCTGGCAGCGTAGGA---------TTTG-ACCTG........................2711.00101000000000
............................................CGA------------------------------------------AGTTTGGCAAAACGGTTCTTGCC--CA................................................................................................................2811.00101000000000
........................................................................................................................................................TTT---CGA----TATCTCCTGGCAGCGTAGGA---------T.................................2711.00101000000000
.........................................................................................................................................................TT---CGA----TATCTCCTGGCAGCGTAG.............................................2311.00101000000000
..........................................................................................................................................................T---CGA----TATCTCCTGGCAGCGTAGGA---------TT................................2611.00101000000000
..................................................................................................................................................................................................TTTG-ACCTGCAGATCGTTTCT-----CTGCG..26200.6513013000000000
....................................................................................................................TTCCACCTTCTTCATCCATTCAGCCGAA....................................................................................2840.50202000000000
............................................................................................................................TCTTCATCCATTCAGCCGAAGGAGC...............................................................................2540.50202000000000
....................................................................................................................TTCCACCTTCTTCATCCATTCAGCC.......................................................................................2580.50404000000000
....................................................................................................................TTCCACCTTCTTCATCCATTCAGCCG......................................................................................2680.38303000000000
.........................................................................................................................................................TT---CGA----TATCTCCTGGCAGCGTA..............................................2230.33101000000000
.....................................................................................................................TCCACCTTCTTCATCCATTCAGCCGA.....................................................................................2660.33201000010000
........................................................................................................................................................TTT---CGA----TATCTCCTGGCAGCGTA..............................................2330.33101000000000
.....................................................................................................................................................CGTTTT---CGA----TATCTCCTGGC....................................................2040.25101000000000
....................................................................................................................TTCCACCTTCTTCATCCATTCAGC........................................................................................24160.25403100000000
...........................................................................................................................TTCTTCATCCATTCAGCCGAAGGAGC...............................................................................2640.25101000000000
..............................................................................................................................TTCATCCATTCAGCCGAAGGAGCCGTT...........................................................................27130.23301100010000
..................................................................................................................................TCCATTCAGCCGAAGGAGCCGTT...........................................................................23140.21302100000000
.........................................................................................................TCTTGCC--CATTCCACCTTCTTCATCCA..............................................................................................2760.17101000000000
............................................................................................................TGCC--CATTCCACCTTCTTCATCCATT............................................................................................2670.14101000000000
.....................................................................................................................TCCACCTTCTTCATCCATTCAGCC.......................................................................................2480.13101000000000
..................................................................................................................................................................................................TTTG-ACCTGCAGATCGTTTCT-----CTGC...25200.10202000000000
....................................................................................................................................................................................................TG-ACCTGCAGATCGTTTCT-----CTGCGT.25200.10202000000000
...................................................................................................................................................................................................TTG-ACCTGCAGATCGTTTCT-----CTGCG..25200.10202000000000
..................................................................................................................................TCCATTCAGCCGAAGGAGCCGTTTT---CGA----...............................................................28120.08101000000000
..............................................................................................................................TTCATCCATTCAGCCGAAGGAGC...............................................................................23130.08100100000000
..............................................................................................................................TTCATCCATTCAGCCGAAGGAGCCGTA...........................................................................27130.08101000000000
..................................................................................................................................TCCATTCAGCCGAAGGAGCCGT............................................................................22140.07101000000000
..................................................................................................................CATTCCACCTTCTTCATCCATTCAGC........................................................................................26160.06101000000000
.....................................................................................................................TCCACCTTCTTCATCCATTCAGC........................................................................................23160.06101000000000
...TTG-G-------------------GGGCT-TCCTTGC----CGA------------------------------------------AGTTTGG....................................................................................................................................26200.05100100000000
..................................................................................................................................................................................................TTTG-ACCTGCAGATCGTTTCT-----CTG....24200.05100010000000
....................................................................................................................................................................................................TG-ACCTGCAGATCGTTTCT-----CTGCG..24200.05101000000000
..........................................................................................................................CTTCTTCATCCATTCAGC........................................................................................18200.05101000000000
...................................................................................................................................................................................................TTG-ACCTGCAGATCGTTTCT-----CTGCGT.26200.05101000000000
....................................................................................................................................................................................TAGGA---------TTTG-ACCTGCAGATCGTTTCT-----C......27200.05101000000000
..................................................................................................................................................................................................TTTG-ACCTGCAGATCGTTTCT-----CTGCGT.27200.05101000000000

Generated: 05/15/2015 at 03:13 PM