ID:

dps_23

 Coordinate:

4_group4:3555872-3555931 +

 Confidence:

confident

 Class:

Testes-restricted

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.8 -23.7 -23.7

Flybase annnotation

intergenic

No Repeatable elements found

mature

  1. dps-mir-2511-1  4_group4:3552572-3552593 +
  2. dps-mir-2511-2  4_group4:3554152-3554173 +
  3. dps_23  4_group4:3555872-3555893 +
star

Sense Strand Reads

GTATGCGTGTTGATGAAAGTGTTTCCCCGACCAAATGCACATTCGTGCTATATGGCACACAGTTGATTTATATTATTTTCTAGTTCATAAGTCTGTTGAGTGTCATATATTTAGAAGTGTGATGCATCCTCATGTATCCTTAGCATGGCTTAGATCAAGA

***********************************.((((.(((....((((((((((.(((..(((((((((((.....))))..)))))))..))).))))))))))....)))))))..************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011

testis

 V112

male body		 M040

female body

 SRR902010

ovaries

 M062

head

 SRR902012

CNS imaginal disc

 M022

male body		 M059

embryo

 GSM444067

head

 GSM343916

embryo
.......................................................................................TAAGTCTGTTGAGTGTCATAGA................................................... 22 1 3 605.00 1815 1628 151 13 13 0 3 2 1 2 2
.......................................................................................TAAGTCTGTTGAGTGTCATAG.................................................... 21 1 3 322.67 968 901 44 10 3 1 6 0 0 3 0
..................................................TATGGCACACAGTTGATTTATA........................................................................................ 22 0 3 141.00 423 391 2 15 0 10 1 0 4 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATA..................................................... 20 0 1 63.00 63 52 10 1 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTAT......................................................................................... 21 0 3 30.67 92 63 13 13 0 2 0 1 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAGAA.................................................. 23 2 3 23.00 69 64 4 1 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAA.................................................... 21 1 1 19.00 19 18 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATATAA.................................................. 23 2 3 17.00 51 51 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATAA....................................................................................... 23 1 3 16.67 50 48 0 2 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATTT.................................................... 21 2 3 9.00 27 24 3 0 0 0 0 0 0 0 0
........................................................................................AAGTCTGTTGAGTGTCATAGA................................................... 21 1 3 9.00 27 18 8 1 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATT..................................................... 20 1 1 7.00 7 3 4 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATTTAA.................................................. 23 3 3 6.67 20 20 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTA.......................................................................................... 20 0 3 6.00 18 17 0 1 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATC..................................................... 20 1 1 6.00 6 6 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATAGATTTGG.............................................. 27 3 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAGAAA................................................. 24 3 3 4.67 14 12 2 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAGT................................................... 22 2 3 4.00 12 9 3 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATATTT.................................................. 23 2 1 4.00 4 3 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATAGTTTT................................................ 25 3 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTTATAGA................................................... 22 2 3 4.00 12 12 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCAT...................................................... 19 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATAGATT................................................. 24 2 3 3.67 11 10 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAGC................................................... 22 2 3 3.33 10 10 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATAT.................................................... 21 1 3 3.00 9 6 3 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAAA................................................... 22 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATATAA.................................................. 23 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATTT.................................................... 21 1 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATAAA...................................................................................... 24 2 3 3.00 9 8 0 1 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATTTT................................................... 22 3 4 2.75 11 9 0 2 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATC........................................................................................ 22 1 3 2.33 7 6 1 0 0 0 0 0 0 0 0
.........................................................................TATTTTCTAGTTCATAAGTCTGT................................................................ 23 0 3 2.33 7 7 0 0 0 0 0 0 0 0 0
.........................................................................TATTTTCTAGTTCATAAGTCTGTTGAG............................................................ 27 0 3 2.00 6 6 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATCT.................................................... 21 1 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATG..................................................... 20 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAAAA.................................................. 23 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCTTT..................................................... 20 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATTTTTTT................................................ 25 3 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGATTGTCATAGA................................................... 22 2 3 1.67 5 5 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAGCC.................................................. 23 3 3 1.67 5 5 0 0 0 0 0 0 0 0 0
........................................................................................AAGTCTGTTGAGTGTCATAG.................................................... 20 1 3 1.67 5 5 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATATT................................................... 22 2 3 1.33 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGGGTCATAG.................................................... 21 2 3 1.33 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATAGTTT................................................. 24 3 3 1.33 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATTAA................................................... 22 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATATT................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTAATAGA................................................... 22 2 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAGTCT................................................. 24 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATATCT.................................................. 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATCTG................................................... 22 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATCCG................................................... 22 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................CTTAAGTCTGTTGAGTGTCATA..................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATCC.................................................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................ATATGGCACACAGTTGATTTATA........................................................................................ 23 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0
..............................................................................TCTAGTTCATAAGTCTGTTGAGTGT......................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATATTTA................................................. 24 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATAGATTT................................................ 25 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATATA................................................... 22 1 3 1.00 3 2 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCA....................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATATTTTTAA.............................................. 27 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................TTTCTAGTTCATAAGTCTGTTGA............................................................. 23 0 3 1.00 3 3 0 0 0 0 0 0 0 0 0
...................................................ATGGCACACAGTTGATTTATAAAT..................................................................................... 24 3 3 1.00 3 3 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAAATT................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAGTTTCA............................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGGGTCATAGA................................................... 22 2 3 1.00 3 3 0 0 0 0 0 0 0 0 0
...................................................ATGGCACACAGTTGATTTATAAAAT.................................................................................... 25 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAGG................................................... 22 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
....................................................................................TCATAAGTCTGTTGAGTGTCATAGT................................................... 25 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATCA....................................................................................... 23 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAGATAA................................................ 25 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATT............................................................................................ 18 0 3 0.67 2 1 0 0 0 0 0 1 0 0 0
.......................................................................................TAAGTCTGTTTAGTGTCATAGA................................................... 22 2 3 0.67 2 1 1 0 0 0 0 0 0 0 0
.........................................................................TATTTTCTAGTTCATAAGTCTGTA............................................................... 24 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTG.......................................................... 15 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATATTATC................................................................................... 27 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATATTA..................................................................................... 25 0 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.................................................ATATGGCACACAGTTGATTTAT......................................................................................... 22 0 3 0.67 2 0 1 1 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTAAGTGTCATAGA................................................... 22 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGGCTGTTGAGTGTCATAGA................................................... 22 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTCGAGTGTCATAG.................................................... 21 2 3 0.67 2 1 1 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTAA......................................................................................... 21 1 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATCT.................................................... 21 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTT........................................................................................... 19 0 3 0.67 2 0 1 1 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATCG.................................................... 21 2 3 0.67 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATTTTT.................................................. 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATTTCC.................................................. 23 3 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTATTGAGTGTCATAGA................................................... 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGTGTGTCATAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGA.............................................................................................. 16 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
....................................................................................TCATAAGTCTATTGAGTG.......................................................... 18 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................................ATGGCACACAGTTGATTTAT......................................................................................... 20 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..................................................TCTGGCACACAGTTGATTTAT......................................................................................... 21 1 3 0.33 1 0 1 0 0 0 0 0 0 0 0
....................................................TGGCACACAGTTGATTTATAA....................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.............................................................................TTCTAGTTCATAAGTCTGTTG.............................................................. 21 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
......................................................................................TTAAGTCTGTTGAGTGTCATAGA................................................... 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCTTAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGCGTCATAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATATTATTT.................................................................................. 28 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATATTCTG................................................................................... 27 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................................ATGGCACACAGTTGATTTATAT....................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
....................................................................................TCATAAGTCTGTTGAGTGTCATAGAA.................................................. 26 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTCAGTGTCATAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TATGGCACATAGTTGATTTAT......................................................................................... 21 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTCATA........................................................................................ 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TTTTCTAGTTCATAAGTCTGTTGAG............................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGACTGTTGAGTGTCATAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
........................................................................................AAGTCTGTTGAGTGTCATAGT................................................... 21 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTTTTGAGTGTCATAGA................................................... 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
......................................................................................CTAAGTCTGTTGAGTGTCATAGA................................................... 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................................ATGGCACACAGTTGATTTATA........................................................................................ 21 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................TAAGCCTGTTGAGTGTCATAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
............................................................................................CTGTTGAGTGTCATAGA................................................... 17 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TTAGTCTGTTGAGTGTCATAGA................................................... 22 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATAAAA..................................................................................... 25 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTCGATTTATA........................................................................................ 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATATC................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.................................................TTATGGCACACAGTTGATTTAT......................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TATGCCACACAGTTGATTTATA........................................................................................ 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAGGTCTGTTGAGTGTCATAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TACGGCACACAGTTGATTTATA........................................................................................ 22 1 3 0.33 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................TAAGTCTGTTGGGTGTCATAG.................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTGATAG.................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGCCTGTTGAGTGTCATAG.................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.................................................ATATGGCACACAGTTGATTTATATTAT.................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTTTCATAG.................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATT........................................................................................ 22 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATAAAT..................................................................................... 25 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATTT....................................................................................... 23 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................................ATGGCACACAGTTGATTTATC........................................................................................ 21 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATAATT.................................................. 23 3 3 0.33 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCGTAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
......................................................................................CTAAGTCTGTTGAGTGTCATAG.................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................AAAGTCTGTTGAGTGTCATAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
..................................................TATCGCACACAGTTGATTTATA........................................................................................ 22 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCAAAG.................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAATGTCATAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATATG................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGGGTCATAGAA.................................................. 23 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCATAGTC.................................................. 23 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
..................................................TATGGCACACAGTTGATTTATTTT...................................................................................... 24 1 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................TAAGACTGTTGAGTGTCATAGAA.................................................. 23 3 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................TAAATCTGTTGAGTGTCATAG.................................................... 21 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGCCATAAAT.................................................. 23 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................TAAATCTGTTGAGTGTCATAGA................................................... 22 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTCGTAG.................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...............................................TATTATGGCACACAGTTGATT............................................................................................ 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..................................................TATGGCAAACAGTTGATTTATG........................................................................................ 22 2 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTTCCATTT.................................................... 21 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
......................................................................................TCAAGTCTGTTGAGTGTCATAG.................................................... 22 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................GCTCATGTATCCTTTGCTTG............. 20 3 9 0.22 2 0 0 2 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTTTT...................................................... 19 2 5 0.20 1 1 0 0 0 0 0 0 0 0 0
............................................................AGTCGATGTATATTATTTT................................................................................. 19 2 7 0.14 1 0 0 0 0 0 0 0 0 0 1
................................................................GTTCTATATTATTTTCTATTTCA......................................................................... 23 3 8 0.13 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................TAAGTCTGTTGAGTGTTTTTT.................................................... 21 3 14 0.07 1 1 0 0 0 0 0 0 0 0 0
..ATGCGTGGTGCGGAAAGTG........................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...............................................ATACATGGCACACGGTTGA.............................................................................................. 19 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

CATACGCACAACTACTTTCACAAAGGGGCTGGTTTACGTGTAAGCACGATATACCGTGTGTCAACTAAATATAATAAAAGATCAAGTATTCAGACAACTCACAGTATATAAATCTTCACACTACGTAGGAGTACATAGGAATCGTACCGAATCTAGTTCT

**************************************.((((.(((....((((((((((.(((..(((((((((((.....))))..)))))))..))).))))))))))....)))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total M040

female body
........................................................................................................................................AGGAGTCGTACCGAAGCTA..... 19 2 3 0.33 1 1
........................................................................................................TATGTAAAGCTTCACACT...................................... 18 2 9 0.11 1 1
..................................................................AAAAAAAATAAAAGATCAAGT......................................................................... 21 2 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
dp5 4_group4:3555822-3555981 + dps_23 confident GTATGCGTGTTGATGAAAGTGTTTCCCCGACCAAATGCACATTCGTGCTATATGGCACACAGTTGATTTATATTATTTTCTAGTTCATAAGTCTGTTGAGTGTCATATATTTAGAAGTGTGATGCATCCTCATGTATCCTTAGCATGGCTTAGATCAAGA
droPer2 scaffold_9415:491-650 + dpe_39 confident GTAACCGTGTTGAGGAAAGTGTTTCCCCCACCAAATGCACATTCGTGCTATATGGCACACAGTTGATTTATATTATTTTCTAGTTCATAAGTCTGTTGAGTGCCATAGAGCAAGAAGTGTGATGCATCCTCATGTATCCTTAGCATGGCTTAGATCAAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GTATGCGTGTTGATGAAAGTGTTTCCCCGACCAAATGCACATTCGTGCTATATGGCACACAGTTGATTTATATTATTTTCTAGTTCATAAGTCTGTTGAGTGTCATATATTTAGAAGTGTGATGCATCCTCATGTATCCTTAGCATGGCTTAGATCAAGASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................TAAGTCTGTTGAGTGTCATAG....................................................213322.6796801001034439016
..................................................TATGGCACACAGTTGATTTATA........................................................................................223141.0042301541000203911
.......................................................................................TAAGTCTGTTGAGTGTCATA.....................................................20163.0063010000100520
..................................................TATGGCACACAGTTGATTTAT.........................................................................................21330.67921130200130630
.......................................................................................TAAGTCTGTTGAGTGTCATAA....................................................21119.001900000010180
..................................................TATGGCACACAGTTGATTTATAA.......................................................................................23316.675002000000480
.......................................................................................TAAGTCTGTTGAGTGTCATT.....................................................2017.0070000004030
..................................................TATGGCACACAGTTGATTTA..........................................................................................2036.001801000000170
.......................................................................................TAAGTCTGTTGAGTGTCATC.....................................................2016.0060000000060
.......................................................................................TAAGTCTGTTGAGTGTCATAGT...................................................2234.00120000003090
.......................................................................................TAAGTCTGTTGAGTGTCAT......................................................1914.0040000000040
.......................................................................................TAAGTCTGTTGAGTGTCATAGC...................................................2233.331000000000100
.......................................................................................TAAGTCTGTTGAGTGTCATATAA..................................................2313.0030000000030
..................................................TATGGCACACAGTTGATTTATAAA......................................................................................2433.0090100000080
..................................................TATGGCACACAGTTGATTTATC........................................................................................2232.3370000001060
.........................................................................TATTTTCTAGTTCATAAGTCTGT................................................................2332.3370000000070
.........................................................................TATTTTCTAGTTCATAAGTCTGTTGAG............................................................2732.0060000000060
.......................................................................................TAAGTCTGTTGAGTGTCATG.....................................................2012.0020000001010
.......................................................................................TAAGTCTGTTGAGTGTCATAGCC..................................................2331.6750000000050
........................................................................................AAGTCTGTTGAGTGTCATAG....................................................2031.6750000000050
.......................................................................................TAAGTCTGTTGAGTGTCATATT...................................................2211.0010000000010
.......................................................................................TAAGTCTGTTGAGTGTCATCCG...................................................2211.0010000000010
.......................................................................................TAAGTCTGTTGAGTGTCATCC....................................................2111.0010000000010
.................................................ATATGGCACACAGTTGATTTATA........................................................................................2331.0030000000030
..............................................................................TCTAGTTCATAAGTCTGTTGAGTGT.........................................................2511.0010000000010
.......................................................................................TAAGTCTGTTGAGTGTCA.......................................................1811.0010000000010
............................................................................TTTCTAGTTCATAAGTCTGTTGA.............................................................2331.0030000000030
...................................................ATGGCACACAGTTGATTTATAAAT.....................................................................................2431.0030000000030
.......................................................................................TAAGTCTGTTGAGTGTCATAGG...................................................2230.6720000000020
....................................................................................TCATAAGTCTGTTGAGTGTCATAGT...................................................2530.6720000000020
..................................................TATGGCACACAGTTGATTTATCA.......................................................................................2330.6720000000020
..................................................TATGGCACACAGTTGATT............................................................................................1830.6721000000010
.........................................................................TATTTTCTAGTTCATAAGTCTGTA...............................................................2430.6720000000020
.......................................................................................TAAGTCTGTTGAGTG..........................................................1530.6720000000020
..................................................TATGGCACACAGTTGATTTATATTATC...................................................................................2730.6720000000020
..................................................TATGGCACACAGTTGATTTATATTA.....................................................................................2530.6720000000020
.................................................ATATGGCACACAGTTGATTTAT.........................................................................................2230.6720100001000
..................................................TATGGCACACAGTTGATTTAA.........................................................................................2130.6720000000020
..................................................TATGGCACACAGTTGATTT...........................................................................................1930.6720100001000
.......................................................................................TAAGTCTGTTGAGTGTCATCG....................................................2130.6720000000020
..................................................TATGGCACACAGTTGA..............................................................................................1630.3310000000010
...................................................ATGGCACACAGTTGATTTAT.........................................................................................2030.3310100000000
....................................................TGGCACACAGTTGATTTATAA.......................................................................................2130.3310000000010
.............................................................................TTCTAGTTCATAAGTCTGTTG..............................................................2130.3310000000010
..................................................TATGGCACACAGTTGATTTATATTATTT..................................................................................2830.3310000000010
...................................................ATGGCACACAGTTGATTTATAT.......................................................................................2230.3310000000010
...........................................................................TTTTCTAGTTCATAAGTCTGTTGAG............................................................2530.3310000000010
........................................................................................AAGTCTGTTGAGTGTCATAGT...................................................2130.3310000001000
...................................................ATGGCACACAGTTGATTTATA........................................................................................2130.3310100000000
.................................................ATATGGCACACAGTTGATTTATATTAT....................................................................................2730.3310000000010
..................................................TATGGCACACAGTTGATTTATT........................................................................................2230.3310100000000
..................................................TATGGCACACAGTTGATTTATAAAT.....................................................................................2530.3310000000010
...................................................ATGGCACACAGTTGATTTATC........................................................................................2130.3310100000000
.......................................................................................TAAGTCTGTTGAGTGTCATAGTC..................................................2330.3310000001000
droPer2
GTAACCGTGTTGAGGAAAGTGTTTCCCCCACCAAATGCACATTCGTGCTATATGGCACACAGTTGATTTATATTATTTTCTAGTTCATAAGTCTGTTGAGTGCCATAGAGCAAGAAGTGTGATGCATCCTCATGTATCCTTAGCATGGCTTAGATCAAGASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................TAAGTCTGTTGAGTGCCATAGA...................................................227237.431662838182451569
.......................................................................................TAAGTCTGTTGAGTGCCATAG....................................................217208.14145702421331415
.......................................................................................TAAGTCTGTTGAGTGCCATAGAA..................................................23719.1413401000133
.......................................................................................TAAGTCTGTTGAGTGCCATA.....................................................20715.291070505097
.......................................................................................TAAGTCTGTTGAGTGCCATAGAAA.................................................2478.14570000057
.......................................................................................TAAGTCTGTTGAGTGCCATAGT...................................................2274.86340000034
..................................................TATGGCACACAGTTGATTTAT.........................................................................................2144.25170301013
.......................................................................................TAAGTCTGTTGAGTGCCAT......................................................1974.00280402022
.......................................................................................TAAGTCTGTTGAGTGCCATT.....................................................2073.14220501016
.......................................................................................TAAGTCTGTTGAGTGCCA.......................................................1873.14220605011
........................................................................................AAGTCTGTTGAGTGCCATAGA...................................................2173.14220100021
.......................................................................................TAAGTCTGTTGAGTGCCATAA....................................................2173.14220001021
.......................................................................................TAAGTCTGTTGAGTGCCATAGAT..................................................2373.00210000021
.......................................................................................TAAGTCTGTTGAGTGCCATAGAG..................................................2371.86130000013
.......................................................................................TAAGTCTGTTGAGTGCCATTT....................................................2171.86130300010
.......................................................................................TAAGTCTGTTGAGTGCCATAGC...................................................2271.148010007
.......................................................................................TAAGTCTGTTGAGTGCCATTC....................................................2171.007000007
.......................................................................................TAAGTCTGTTGAGTGCCATC.....................................................2071.007010006
.......................................................................................TAAGTCTGTTGAGTGCCATAGTT..................................................2370.715000005
.......................................................................................TAAGTCTGTTGAGTGCCATAGG...................................................2270.715300002
.......................................................................................TAAGTCTGTTGAGTGCCATAGTC..................................................2370.715000005
.......................................................................................TAAGTCTGTTGAGTGCCATTTT...................................................2280.635010103
.......................................................................................TAAGTCTGTTGAGTGCCATTCC...................................................2270.574000004
.......................................................................................TAAGTCTGTTGAGTGCCATCT....................................................2170.574000004
.......................................................................................TAAGTCTGTTGAGTGCCATCCC...................................................2270.574000004
.......................................................................................TAAGTCTGTTGAGTGCCATAT....................................................2170.574000004
.......................................................................................TAAGTCTGTTGAGTGCCATAGAAT.................................................2470.574000004
.......................................................................................TAAGTCTGTTGAGTGCCAA......................................................1970.574000004
..................................................TATGGCACACAGTTGATTTA..........................................................................................2040.502000101
..................................................TATGGCACACAGTTGATTTATT........................................................................................2240.502010001
.......................................................................................TAAGTCTGTTGAGTGCCATATT...................................................2270.433000003
........................................................................................AAGTCTGTTGAGTGCCATAG....................................................2070.433010002
.......................................................................................TAAGTCTGTTGAGTGCCATTCG...................................................2270.292000002
.......................................................................................TAAGTCTGTTGAGTGCCATTTC...................................................2270.292000002
....................................................................................TCATAAGTCTGTTGAGTGCCATAGA...................................................2570.292000002
.......................................................................................TAAGTCTGTTGAGTGCCATAGTCT.................................................2470.292000002
.......................................................................................TAAGTCTGTTGAGTGCCATCC....................................................2170.292000002
..................................................TATGGCACACAGTTGATTTC..........................................................................................2040.251000001
...................................................ATGGCACACAGTTGATTTAT.........................................................................................2040.251010000
..................................................TATGGCACACAGTTGATTTATCA.......................................................................................2340.251000001
..................................................TATGGCACACAGTTGATTTATC........................................................................................2240.251000001
.......................................................................................TAAGTCTGTTGAGTGCCATAGAC..................................................2370.141000001
.......................................................................................TAAGTCTGTTGAGTGCCATTA....................................................2170.141000001
.......................................................................................TAAGTCTGTTGAGTGCCATAAG...................................................2270.141000001
.......................................................................................TAAGTCTGTTGAGTGCCATG.....................................................2070.141000001
..........................................................................................GTCTGTTGAGTGCCATAG....................................................1870.141000001
...............................................................................CTAGTTCATAAGTCTGTTGAGTGCCA.......................................................2670.141000001
.......................................................................................TAAGTCTGTTGAGTGCCATAGAAG.................................................2470.141000001
..............................................................................TCTAGTTCATAAGTCTGTTGAGTGC.........................................................2570.141000001
........................................................................................AAGTCTGTTGAGTGCCATAGAA..................................................2270.141010000
...................................................................................TTCATAAGTCTGTTGAGTG..........................................................1970.141000001
.........................................................................................AGTCTGTTGAGTGCCATAGA...................................................2070.141000001
............................................................................TTTCTAGTTCATAAGTCTGTTGAGTGC.........................................................2770.141000001
.........................................................................................AGTCTGTTGAGTGCCATA.....................................................1870.141010000
.......................................................................................TAAGTCTGTTGAGTGCCATAGAAAG................................................2570.141000001
.......................................................................................TAAGTCTGTTGAGTGCCATTAG...................................................2270.141010000
..........................................................................................GTCTGTTGAGTGCCATAGA...................................................1970.141000001
.......................................................................................TAAGTCTGTTGAGTGCCATAGCT..................................................2370.141000001
.......................................................................................TAAGTCTGTTGAGTGCCATCTT...................................................2270.141000001
.......................................................................................TAAGTCTGTTGAGTGCCATAGTTT.................................................2470.141000001
.......................................................................................TAAGTCTGTTGAGTGCCATCCT...................................................2280.131000001
.......................................................................................TAAGTCTGTTGAGTGCCATTCT...................................................2280.131000001
.......................................................................................TAAGTCTGTTGAGTGCCTC......................................................1990.111000001

Generated: 10/20/2015 at 06:55 PM