ID:

dps_2294

 Coordinate:

Unknown_singleton_1403:3038-3275 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.3 -12.0 -11.6 -11.5

Flybase annnotation

CDS [Dpse\GA26121-cds]; exon [dpse_GLEANR_2845:1]; exon [dpse_GLEANR_2845:2]; CDS [Dpse\GA26121-cds]; intron [Dpse\GA26121-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1N1_DVirRCHelitron+
mature
  1. Unknown_group_709:13205-13229 +
  2. dps_2294  Unknown_singleton_1403:3184-3208 -
  3. Unknown_group_20:15942-15966 +
  4. Unknown_group_783:5468-5492 -
  5. Unknown_group_156:56200-56224 -
star
  1. Unknown_group_8:682-704 -
  2. dps_2294  Unknown_singleton_1403:3217-3239 -
  3. XL_group1e:1472443-1472465 -
  4. XL_group1e:9115869-9115891 -
  5. XL_group1e:9283437-9283459 -
  6. Unknown_singleton_1536:1286-1308 -
  7. 2:6047713-6047735 -
  8. XL_group3a:1565094-1565116 -
  9. XR_group8:5643337-5643359 -
  10. 4_group1:2245365-2245387 -
  11. 4_group3:42805-42827 +
  12. XR_group6:630794-630816 -
  13. XR_group6:3107650-3107672 +
  14. XR_group6:4108601-4108623 -
  15. dps_2528  XL_group1a:5996789-5996811 -
  16. Unknown_group_793:563-585 +
  17. Unknown_singleton_727:1772-1794 +
  18. Unknown_singleton_1686:1650-1672 +
  19. Unknown_singleton_1508:830-852 -
  20. Unknown_singleton_2339:565-587 +
  21. 2:18255318-18255340 -

Sense Strand Reads

----------------------------######################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATATCACATAAGTACATAAGATATAAAATGTCGGACGGACGGACAGACGGTTAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAGGAATATATATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGGTTACACTTATCCATTTTCACCACAAATATAATATAAAGATAAAGATAATCAACCGTGACTTTCGCTTTTTACACAAAAGCGGAAAGCATTCAATCCAAAGCGTACGACCATGTGATTCGGGCCATTATCGGTGACTGTCATGCCAAGCCACTTGTCGTGAGCTGCTGGACTACTATTTTGAGGAGGATTCCGGCTGG
**************************************************************************************.((....((((................(((((((....)))).)))))))....))**************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902011
testis
 M040
female body
 SRR902010
ovaries
 V112
male body		 SRR902012
CNS imaginal disc
 M059
embryo
 M062
head
 GSM444067
head
 GSM343916
embryo
.................TAAGATATAAAATGTCGGACGGACGG....................................................................................................................................................................................................................................................................................................... 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0
................................CGGACGGACGGACAGACGGT.............................................................................................................................................................................................................................................................................................. 20 0 3 1.00 3 3 0 0 0 0 0 0 0 0
...............................TCGGACGGACGGACAGACGGTTAG........................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................TAAGATATAAAATGTCGGACGGACGGA...................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................GGACGGACGGACAGACGGT.............................................................................................................................................................................................................................................................................................. 19 0 3 1.00 3 0 0 0 0 3 0 0 0 0
.............AACATAAGATATAAAATGTCGGACGG........................................................................................................................................................................................................................................................................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................TCGGAAACGATTCCTTCTGGACGGT.................................................................................................................................................................................................... 25 0 5 0.80 4 4 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................CTTGTCGTGAGATGTTGG............................. 18 2 3 0.67 2 0 2 0 0 0 0 0 0 0
.....................................................................................................................TCGGAAACGATTCCTTCTGGACGG..................................................................................................................................................................................................... 24 0 5 0.60 3 0 1 1 0 0 1 0 0 0
...............................TCGGACAGACGGACAGACGGTTAAAAA........................................................................................................................................................................................................................................................................................ 27 3 2 0.50 1 0 0 1 0 0 0 0 0 0
......................................................................................TGCTGATCAGGAATATATATACT..................................................................................................................................................................................................................................... 23 0 20 0.45 9 2 4 0 3 0 0 0 0 0
......................................................................................TGCTGATCAGGAATATATATACTTT................................................................................................................................................................................................................................... 25 0 18 0.39 7 2 1 0 4 0 0 0 0 0
................................................................................................................TAGGGTCGGAAACGATTCCTTCTGGACG...................................................................................................................................................................................................... 28 0 20 0.35 7 0 0 0 1 0 6 0 0 0
..................................GACGGACGGACAGACGGT.............................................................................................................................................................................................................................................................................................. 18 0 3 0.33 1 1 0 0 0 0 0 0 0 0
......................................................................................TGCTGATCAGGAATATATATACTTTA.................................................................................................................................................................................................................................. 26 0 18 0.33 6 3 0 1 2 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................CGTGTCGTGAGATGCTGG............................. 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................CCACCGTGACTTTCGC.................................................................................................................................... 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................CGTGTCGTGAGATGCTGGG............................ 19 3 10 0.20 2 0 0 0 2 0 0 0 0 0
......................................................................................TGCTGATCAGGAATATATATAC...................................................................................................................................................................................................................................... 22 0 20 0.20 4 2 0 0 2 0 0 0 0 0
............................................................................................................TTTATAGGGTCGGAAACGATT................................................................................................................................................................................................................. 21 0 20 0.20 4 0 3 0 0 0 0 0 1 0
.................................................................................................................................................................................................................................................................................................CTCTTGTCGTGAGATGTTGG............................. 20 3 5 0.20 1 0 1 0 0 0 0 0 0 0
...............................................................................CTATTGATGCTGATCAGGAAT.............................................................................................................................................................................................................................................. 21 0 20 0.15 3 0 2 0 0 0 0 0 0 1
......................................................................................TGCTGATCAGGAATATATATACTT.................................................................................................................................................................................................................................... 24 0 20 0.15 3 0 2 0 1 0 0 0 0 0
........................................................CAGACAGGGCTCAATCGACTCGG................................................................................................................................................................................................................................................................... 23 0 20 0.15 3 3 0 0 0 0 0 0 0 0
...................................................................................TGATGCTGATCAGGAATATAT.......................................................................................................................................................................................................................................... 21 0 20 0.15 3 1 1 0 1 0 0 0 0 0
.....................................................................................................................TCGGAAACGATTCCTACTGGACGG..................................................................................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0 0 0 0 0
..............................GTCGTACGGACGGACAGAC................................................................................................................................................................................................................................................................................................. 19 1 7 0.14 1 0 0 0 0 0 0 1 0 0
..............................................................................................................................................................................................................................GAAAGCATTCAACCCAAAGG................................................................................................ 20 2 10 0.10 1 0 1 0 0 0 0 0 0 0
........................................................CAGACAGGGCTCAATCGACT...................................................................................................................................................................................................................................................................... 20 0 20 0.10 2 0 2 0 0 0 0 0 0 0
......................................................GACAGACAGGGCTCAATCGACTCGG................................................................................................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................CTCTTGTCGTGAGATGTTG.............................. 19 3 20 0.10 2 0 2 0 0 0 0 0 0 0
..............................TGCGGACGGACGGACAGACGGT.............................................................................................................................................................................................................................................................................................. 22 2 10 0.10 1 1 0 0 0 0 0 0 0 0
...............................TCGGACGGACGGAAAGACGG............................................................................................................................................................................................................................................................................................... 20 1 12 0.08 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................CTTGTCGTGAGATGTTGGG............................ 19 3 15 0.07 1 0 1 0 0 0 0 0 0 0
......................................................................................TGCTGATCAGGAATATATATACTTTAT................................................................................................................................................................................................................................. 27 0 15 0.07 1 1 0 0 0 0 0 0 0 0
......................................................................................TGCTGATCAGGAAGATATATACT..................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................................................................TGCTGATCAGGAATATATATA....................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0 0 0 0 0
................................................................................................................TAGGGTCGGAAACGATTCCTTCTGGCAA...................................................................................................................................................................................................... 28 3 20 0.05 1 0 1 0 0 0 0 0 0 0
............................................................................CGGCTATTGATGCTGATCAGG................................................................................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0
......................................................................................TGCTGATCAGGAATGTATATACTTTG.................................................................................................................................................................................................................................. 26 2 20 0.05 1 0 0 1 0 0 0 0 0 0
...............................................................................CTATTGATGCTGATCAGGA................................................................................................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 0 0 0 1 0
...................................................................................TGATGCTGATCAGGAATAT............................................................................................................................................................................................................................................ 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0
...................................................................................TGATGCTGATCGGGAATATAT.......................................................................................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.................................................................................................................AGGGTCGGAAACGATTCCTTCTGGAC....................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................CTATTGATGCTGATCAGGAATA............................................................................................................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0 0 0 0 0
................................................................................................................TAGGGGCGGAAACGATTCCTTCTGGAC....................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................CGGCTATTGATGCTGATCAG.................................................................................................................................................................................................................................................. 20 0 20 0.05 1 0 1 0 0 0 0 0 0 0
...............................................................................CGATTGATGCTGATCAGGAAT.............................................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 0 1 0 0
.......................................................................................................TATACTTTATAGGGTCGGAAAA..................................................................................................................................................................................................................... 22 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................................ATCAGGAATATATATGCTTTG.................................................................................................................................................................................................................................. 21 2 20 0.05 1 0 1 0 0 0 0 0 0 0
................................................................................................................TAGGGTCGGAAACGATTCCTTCTGGACC...................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................TCCTGATCAGGAATATATATACT..................................................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 1 0 0 0 0 0
................................................................................TATTGATGCTGATCAGGA................................................................................................................................................................................................................................................ 18 0 20 0.05 1 0 1 0 0 0 0 0 0 0
....................................................................AATCGACTCGGCTATTGATGCTG....................................................................................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0 0 0 0 0
..................................................................................TTGATGCTGATCAGGAATATA........................................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................TACTTTATAGGGTCGGAAA...................................................................................................................................................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0
..................................................................................TTGATGCTGATAAGGAATATATT......................................................................................................................................................................................................................................... 23 2 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................TCGACTATTGATGCTGATCAG.................................................................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 1 0 0 0 0 0 0
...........................................................................................................CTTTATAGGGTCGGAAACGAT.................................................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0 0 0 0 0

Anti-sense strand reads

TTATAGTGTATTCATGTATTCTATATTTTACAGCCTGCCTGCCTGTCTGCCAATCTGTCTGTCCCGAGTTAGCTGAGCCGATAACTACGACTAGTCCTTATATATATGAAATATCCCAGCCTTTGCTAAGGAAGACCTGCCAATGTGAATAGGTAAAAGTGGTGTTTATATTATATTTCTATTTCTATTAGTTGGCACTGAAAGCGAAAAATGTGTTTTCGCCTTTCGTAAGTTAGGTTTCGCATGCTGGTACACTAAGCCCGGTAATAGCCACTGACAGTACGGTTCGGTGAACAGCACTCGACGACCTGATGATAAAACTCCTCCTAAGGCCGACC
****************************************************************************************************************************************************************************************************.((....((((................(((((((....)))).)))))))....))************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body		 GSM343916
embryo
 SRR902012
CNS imaginal disc
 M059
embryo
 SRR902010
ovaries
 M022
male body		 M062
head
......................................................................AGCTGAGCCGATAACTACGACTAGT................................................................................................................................................................................................................................................... 25 0 20 3.10 62 62 0 0 0 0 0 0 0 0
....................................................................................................................................................ATAGGTAAAAGTGGTGTTT........................................................................................................................................................................... 19 0 7 1.86 13 13 0 0 0 0 0 0 0 0
..............................................................................................................ATATCCCAGCCTTTGCTAAGGAAG............................................................................................................................................................................................................ 24 0 20 1.15 23 23 0 0 0 0 0 0 0 0
.............................................................................................................AATATCCCAGCCTTTGCTAAGGAAG............................................................................................................................................................................................................ 25 0 20 1.05 21 19 0 0 0 0 2 0 0 0
................................................................................................................................................GTGAATAGGTAAAAGTGGTGTTT........................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................CTGTCTGCCAATCTGTCTGT.................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................AATAGGTACAAGTGGTGTTT........................................................................................................................................................................... 20 1 2 1.00 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................AATAGGTGAAAGTGGTGTTT........................................................................................................................................................................... 20 1 5 1.00 5 3 0 0 2 0 0 0 0 0
...............GTATTCTATATTTTACAGCCTGCCT.......................................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................TATCCCAGCCTTTGCTAAGGAAG............................................................................................................................................................................................................ 23 0 20 0.60 12 12 0 0 0 0 0 0 0 0
.........................................................TCTGTCCCGAGTTAGCTGA...................................................................................................................................................................................................................................................................... 19 0 20 0.50 10 10 0 0 0 0 0 0 0 0
...................................................................................................................................................AATAGGTAAAAGTGGTGTTT........................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................AGCCTTTGCTAAGGAAGACC......................................................................................................................................................................................................... 20 0 20 0.45 9 9 0 0 0 0 0 0 0 0
.........................................................................TGAGCCGATAACTACGACTAGTC.................................................................................................................................................................................................................................................. 23 0 18 0.39 7 5 2 0 0 0 0 0 0 0
................................................................................................................ATCCCAGCCTTTGCTAAGGAAG............................................................................................................................................................................................................ 22 0 20 0.35 7 7 0 0 0 0 0 0 0 0
...................................................................................................................................................AATAGGTGAAAGTGGTGTT............................................................................................................................................................................ 19 1 6 0.33 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................AATAGGTAAAAGTGGTGTTA........................................................................................................................................................................... 20 1 3 0.33 1 1 0 0 0 0 0 0 0 0
.................................................................GAGTTAGCTGAGCCGATAA.............................................................................................................................................................................................................................................................. 19 0 20 0.30 6 6 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TGGCAGTGAAAGCGAAGA................................................................................................................................ 18 2 4 0.25 1 0 0 0 0 1 0 0 0 0
..........................................................................GAGCCGATAACTACGACTAGTC.................................................................................................................................................................................................................................................. 22 0 19 0.21 4 2 1 1 0 0 0 0 0 0
.......................................................................GCTGAGCCGATAACTACGACTAGTC.................................................................................................................................................................................................................................................. 25 0 15 0.20 3 3 0 0 0 0 0 0 0 0
....................................................................................................................................................ATAGGTACAAGTGGTGTTT........................................................................................................................................................................... 19 1 10 0.20 2 2 0 0 0 0 0 0 0 0
....................................................ATCAGTCTGTCCCGAGTTAGC......................................................................................................................................................................................................................................................................... 21 1 5 0.20 1 1 0 0 0 0 0 0 0 0
........................................................................CTGAGCCGATAACTACGACTAGTC.................................................................................................................................................................................................................................................. 24 0 17 0.18 3 1 2 0 0 0 0 0 0 0
...................................................................................................................................................AATAGGTGAAAGTGGTGT............................................................................................................................................................................. 18 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.......................................................TGTCTGTCCCGAGTTAGCTGA...................................................................................................................................................................................................................................................................... 21 0 20 0.15 3 0 2 1 0 0 0 0 0 0
...................................................................................................................CCAGCCTTTGCTAAGGAAG............................................................................................................................................................................................................ 19 0 20 0.15 3 0 0 0 0 0 2 0 0 1
..............................................................CCCGAGTTAGCTGAGCCGATAACTACG......................................................................................................................................................................................................................................................... 27 0 20 0.15 3 3 0 0 0 0 0 0 0 0
..............................................................CCCGAGTTAGCTGAGCCGATAACTAC.......................................................................................................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0 0 0 0
......................................................................AGCTGAGCCGATAACTACGACTAGTC.................................................................................................................................................................................................................................................. 26 0 15 0.13 2 2 0 0 0 0 0 0 0 0
....................................................................................................................................................ATAGGTAATAGTGGTGTTT........................................................................................................................................................................... 19 1 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................TATTCTGTCTGTCCCGAGTTAGC......................................................................................................................................................................................................................................................................... 23 2 8 0.13 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................ATAGGTAAAAGTGGTGTT............................................................................................................................................................................ 18 0 8 0.13 1 1 0 0 0 0 0 0 0 0
........................................................................CTGAGCCGATAACTACGACTAGTCCT................................................................................................................................................................................................................................................ 26 0 17 0.12 2 0 2 0 0 0 0 0 0 0
............................................................................................................AAATATCCCAGCCTTTGCTAA................................................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................CTGTCCCGAGTTAGCTGAGC.................................................................................................................................................................................................................................................................... 20 0 20 0.10 2 0 0 2 0 0 0 0 0 0
........................................................GTCTGTCCCGAGTTAGCTGAG..................................................................................................................................................................................................................................................................... 21 0 20 0.10 2 0 2 0 0 0 0 0 0 0
...........................................................................................................GAAATATCCCAGCCTTTGCTAAGGAAGC........................................................................................................................................................................................................... 28 1 20 0.10 2 0 0 0 0 0 0 2 0 0
...........................................................................AGCCGATAACTACGACTAGTC.................................................................................................................................................................................................................................................. 21 0 20 0.10 2 1 0 1 0 0 0 0 0 0
.........................................................................................................AAGAAATATCCCAGCCTTTGCTAAGGAAG............................................................................................................................................................................................................ 29 1 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................................................GCCGATAACTACGACTAGTC.................................................................................................................................................................................................................................................. 20 0 20 0.10 2 1 0 1 0 0 0 0 0 0
...........................................................................................................GAATTATCCCAGCCTTTGCTAAGGAA............................................................................................................................................................................................................. 26 1 20 0.10 2 0 2 0 0 0 0 0 0 0
.................................................................GAGTTAGCTGAGCCGATAACT............................................................................................................................................................................................................................................................ 21 0 20 0.10 2 0 0 2 0 0 0 0 0 0
.............................................................TCCCGAGTTAGCTGAGCCGAT................................................................................................................................................................................................................................................................ 21 0 20 0.10 2 0 0 2 0 0 0 0 0 0
................................................................................................................ATCCCAGCCTTTGCTAAGGAAGACCT........................................................................................................................................................................................................ 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................................GTCCCGAGTTAGCTGAGCCGG................................................................................................................................................................................................................................................................. 21 1 20 0.10 2 2 0 0 0 0 0 0 0 0
..........................................................................................................TGAAATATCCCAGCCTTTGCTAAGGAAG............................................................................................................................................................................................................ 28 0 20 0.10 2 0 1 0 0 0 1 0 0 0
....................................................................................................................................................ATAGGTCAAAGTGGTGTTT........................................................................................................................................................................... 19 1 11 0.09 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................ACAGGTAAAAGTGGTGTTT........................................................................................................................................................................... 19 1 11 0.09 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................AATAGGTGACAGTGGTGTT............................................................................................................................................................................ 19 2 14 0.07 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................GGTAAAAGTGGTGTTTATG........................................................................................................................................................................ 19 1 14 0.07 1 1 0 0 0 0 0 0 0 0
............................................................................................................AAATATCCCAGCCTTTGCTAAGGAAG............................................................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0 0 0 0 0
..........................................................................................................AGAAATATCCCAGCCTTTGCTAAGGAA............................................................................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................TGTCCCGGGTTAGCTGAGCCG.................................................................................................................................................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................ATACCAGCCTTTGCTAAGGAAG............................................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TGAAATATCCCAGCCTTTGCTAA................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................TGAGCCGATAAATACGACTAGTC.................................................................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................CAGCCTTTGCTAAGGAAGACC......................................................................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 1 0
.....................................................................TAGCTGAGAAGATAACTACGACTAGTC.................................................................................................................................................................................................................................................. 27 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................GAAATATCCCAGCCTTTGCTAAGGAAGA........................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................CTGAGAAGATAACTACGACTAGTC.................................................................................................................................................................................................................................................. 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................ATCCCAGCCTTTGCTAAGGA.............................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................TCTGTCCCGAGTTAGCTGAGCCG.................................................................................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0
...........................................................................................................GAAATATCCCAGCCTTTGCTA.................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TGAAATATCCCAGCCTTTGCT................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................GCTGAGCCGATACCTACGACTAGTC.................................................................................................................................................................................................................................................. 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0
..........................................................................................................AGAAATATCCCAGCCTTTGCTAAGGAAG............................................................................................................................................................................................................ 28 1 20 0.05 1 0 0 0 0 0 0 1 0 0
................................................................................................................ATCCCAGCCTTTGCTAAGGAAGACCTG....................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................ATGGCAGTGAAAGCGAAGA................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0
...........................................................TGTCCCGAGTTAGCTGAGCCGAT................................................................................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................ATATATGAAATATCCCAGCCTTTGCTAA................................................................................................................................................................................................................. 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..................................................................................................TATATATATGAAATATCCCAGCCTT....................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_singleton_1403:2988-3325 - dps_2294 AATATCACA--TA----AGTACATAAGATA---------TAAAAT--------GTCGGACGGACGGACAGACGGTTAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAGGAA----TATATATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGGTTACAC--TTATCCATTTTCACCACA--AATATA-----ATATA-------------------------------------------------------------------------------------------------------------------------------------AAGATAAAGATAAT------CAACCGTGA-----------------------CTTTCGCTTTT---TACACAAAAGC---------------G--GAAAGC-------------------------------------------------------------------------------ATTCAATCCAAAGCGT-ACGACC----------------------------------------------------------------------------------------------------ATGTGATTCG---GGCCATTATCGGTGACTGTCATGCCAAGCC-AC-TTGTCGTG------AGCTG----------------------------------------------------CTG---------GACTACTATTTTGAGGAGGATTCCGGCTGG
droPer2 scaffold_62:334677-335072 + AATATCACA--TA----AGTACATAAGATA---------TAAAAT--------GTCGGACGGACGGACAGACGGTTAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAGGAA----TATATATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGGTCA--CACTTATCCATTTTCACCACA--AATATA-----ATATA-------------------------------------------------------------------------------------------------------------------------------------AAGATAAAGATAAT------CAACCGTGA-----------------------CATTCGCTTTT---TACACAAAAGC---------------G--GAAAGC-------------------------------------------------------------------------------ATTCAATCCGAAGCGT-ACGACC----------------------------------------------------------------------------------------------------ATGTGATTCG---GGCCATTATCGGTGACTGTCATGCCAAGCC-AC-TTGTCGTGATGGTGATCATTTCCCAGCGTCCACCGTGCTCTGCCACCATAGCCGAGTAGGGCATGGGCAAGCTG---------GACTACTATTTTGAGGAGTATTCCGGCTGG
droWil2 scf2_1100000004954:4310983-4311209 + GATAGCTCT--TA------------AGATGGCTGAGTAAAACGCGTACGCACCGACGGACAGACGGTCAGACGGACAGACGGACATGGCTATATCGACTTAGCTTCTCATGCTGATCAAGAA----TATATATACTTTATGGGGTCGGAAACGTCTCCTTCTGTGCG-TTACAAACA--TCT-----GA--CCAATT--TTA-----TAATACCCTCT------GC-----AAGGGTA--------------------------------------------------------------------------------TAATAAT-----------------A----------------AA------------A-----------------------CTCTTACGTTG---CTCGCAAATGC---------------G--G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12855:8252854-8253111 + AT---------------------------A---------CGGACG--------GACAGACGGACGGACGGACAGACAGACGGACACGGCTAGATCGACTCGGCTATTGATGCTGATCA-GAA----TATATATACTTTATGGAATTGGAGATGCTTCCTTCTGCCTG-TTACATACA--TTTGGATTTCGCACAAAT--ACA-----ATATACCCTTATACCCA--------------------------------------------------------------------------TTTTTAATGGGTTCAGGGTATAAAAAG---------------------------------C------CCAGCATTT-----------------------TTTTCG--ATA---TTCCTAGATGT---------------G--AACATT-------------------------------------------------------------------------------ATTTAATCAAAATCGT-AATACT----------------------------------------------------------------------------------------------------ATATCAT---------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_4234:5661-5903 - -------------------------------------------------------CGGACGAACGGACGGACAGACAGACGGACAGGGCCAAATCGACTCAGCTCGTCGCCCTGATCAAGAA----TATATATACTTTGTGGGGTCTTCCACGCCTCCTTCTGCCTG-TTACATACT--TTT-----AA--TAAAAC--ATTGAACATTATACCCTGATTT---CC-----CA-----------------------------------------------------------------TTTTCAATGAGTTCAGGGTATAAAAAC-----------------A----------------CA------TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAACAATTTTGGGTTGCCCGTT-------GAGA-------------------------------G-----------------------TG---GGTCACCATCGATGCCTGCCACGC---------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15116:403389-403554 - T------------------------------------------------------CAAACAGACGGGTGGACGGACAGACGGATATGGCTCTATCGACTCGGTTGTTGAGCCTGATCAAGAA----TATATATACTTTATGGGGTCGGAGATGCTTCCTTCTGCTTG-TTACATACT--TTC-----GC--AAAAAA--CCA-----TTAT--------------------CAGGGTA----------------TAAAAAATCTTAAACGGT----------------------------------------------------------------------------------------------------TA-----------------------CTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_255:241-555 - -------------------------------------------------------CAGACAGACAGACAGACGGACAGACGGACACGCTCACATCGACTCAGGAGGTGATCCTGATCAAGAA----TATATATACTTTATAAGGTCGGAGATGTCTCCTTCATTGCG-TAGCACACT--TTT-----GA--CCAAAA--TTA-----TAATACCCTCT------GC-----AAGGGTA--------------------------------------------------------------------------------TAAAAAT-----------------C----------------CA------AAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------TG----------------------ATATTGAAAAGCCTAAT-------GATATACAAGAAATAGATATATTTAATAAACGTGAGTCT------------TGGTCACTCGATTGGCTATTACCAAACGGTGTCATCCAAAGATCTCTTTATTTAAATTGTGAACTT----------------------------------------------------TTGGCCATAACGGA-----TTTTTGAGGAGG-----------
droBip1 scf7180000396434:260808-261049 + GAGACTAGT--TT----GCGTAGAAACAGA---------CAGACG--------GACAGACAGACGGACAGACGGACAGACGGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAA----TATATATACTTTATAGGGTCGGAAATGTCTCCTTCACTGCG-TTGCACACT--TTT-----GA--CCAAAA--TTA-----TAATACCCTCT------GC-----AAGGGTA----------------TAAAAAAGAGTAAAAAG---------------------------------------------------AAA-----------------G----------------CT----------------------GTATCTTTTTACCA--------------------------------------------------------------------------------------------------------------------------------TCTCAATCCAAAACTT-ACCACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000301787:11754-12009 - A----------------------------------------------------------CGGACAGACGGACGGACAGACGGACATGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAA----TATATATACTTTATAGGGTCGGAAAGGTCTCCTTCACTGCG-TTGCAAACT--TCT-----GA--CTGAAA--TTA-----TAATACCCT--------GC-----AAGGGTA--------------------------------------------------------------------------------TAATAACTGTACCAACATTAAGTTG----------------CA------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------TT----------------------GTGGTGGAAAGCCTGGTAACTTCAGAGA-------------------------------GTTCAAAAACTCCGTTGTATAATTTA---GTACATCATCGGGATCTGTCATG----------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000448739:845-1068 + TACA-------------------------------------TAGA--------ATCAGACAGACGGACCTACGGACAGACGTACAGACGGATTTCGATTCAGATCGTGATGCTGATCAAGAA----TATATATACTTTATAAGGTTTGAGGTGCCTCCTTCACTGCG-TTGCAAACG--CTT-----TG-------------------------CTCT------GC-----AAGGGTATAATAAAATGAGACAC------A---------------------------------------------------------TAA----------------------------TAAAGTTTTC------CGACCGTAA-----------------------TAA-CCTTATT---TACACAA-TTC---------------A--AGATGT-------------------------------------------------------------------------------ATTCAATCCGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000486820:43-273 + -------------------------------------------------------CGGACGGACAGACGGACGGACAGACGGACATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAA----TATATATACTTTATAGGGTCGGAGACGTCTCCTTCACTGCG-TTGCAAACT--TTT-----GA--CTGAAA--TTA-----TAATACCCTCT------GC-----AAGGGTA----------------TAAAAATTACTAAAATATAACTTTTTTTATACCCTTGCAGAGGG------------------TATTAT-------------------------------------------------------------------------AA--------------------------------------------------------------------------------------------------------------------------------TTTCAGTCAGAAGTTT-GCAACG----------------------------------------------------------------------------------------------------CAGTGA----------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000761884:10339-10593 - AAA------------------------------------CA------------GACGGACAGACGGACAGACGGACAGACGGACATGGCTATATCGACTCCCCTATTGATCCTGATCAAGAA----TATATATACTTTATA-GGTCGGAAACGTCTCATTCACTGCG-TTACAAACT--TCT-----GA--CCAAAA--TTA-----TAATACCGCGTC------------------------------------------------------------------------------------------------------------------------------AAGACAC---------------------G-----------------------ATTTAATCT---CCCCT--AAAATT---------------A--T------------------------------------------------------------------------------------TATA-----TAAAATT-GCCGAACTGTGCAGTAAATCTTCTCACCACAATATTCAACAGCATGAT-------GAAA-------------------------------T-----------------------TG---GGCTATTATC-----------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000299447:35427-35675 - AAGATC---------------------------------TCAGCGTTCA----TACAGACAGAAAGAAAGACGGACACACGAACACGGCTAGATCGACTCGGCTAGTGATCCTGATCAAGAA----TATATATACATTATGGGGTCGGAAACGCTTCCTTCTGCCTC-GTAAATACT--TTC-----CG--ACGAAT--CTA-----GTATACCCTTTTACTCTACGAGTAACGGGTA--------------------------------------------------------------------------------TAAAAAT-----------------A----------------TA----TCACTGAAA-----------------------C---------T---TACAAATAAAC---------------A--AAAAGC-------------------------------------------------------------------------------ACT-AATTTACACTGT-GTGTTT----------------------------------------------------------------------------------------------------ATGAAATTC-------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415117:8993-9287 + T------------------------------------------------------CATACAGACAGACGGACGGACAGACG-ACATGGCTAGATCGACTCGGCTAGTGACCCTGATCAAGAA----TATATATACTTTATAGGGTCTGAAACGCTTCCTAATAGCTG-TTACATACT--TTT-----GC--ACGAAT--ACA-----ATATAC------------------TAGTGTT--------------------------------------------------------------------------------TAAAAAA---------------------------------CT-----------T-G-----------------------CTTTTGCTGCTGCTTCTAAAAAAGTGGCAGTCGCAGTCGAA--GCAAACGTAAAATCCGCGCACTGACGACTGTCAAAGCAAAAGCAAGTCGTTGCTTTCTGATTTTTAGCTGCTGCTGTGCTGTTGCTTTCAGTCGGTAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409101:13100-13352 + AT-ATCTCT--TA---TAGTTCCTGAGATC---------CCAGCG--------TTCATACGGACAGACGGACAGACAGACGGACATGGCTCAATATACTTCGCTATTGATCCTGATTAGGAA----TATATATACTTTATAGGGTCGGAAACGCTTCCCTTCACCTG-TTACATACT--TTC-----CA--ACGAAT--CTA-----GTATACCCACTTACTCTACGATTAACGGGTA--------------------------------------------------------------------------------TAATAAC-----------------A----------------ACGCATCGAC---TA-----------------------CCTTCGCTTCT---GTCGCCAGCGC---------------A--GCAAGC-------------------------------------------------------------------------------ATGAAAACCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2R:1607209-1607431 - AATCTTTCAGCTTTTATAGTTCCTGAGATC---------TCG----------------ACGTTTTTACGGACGGACTGACGGATATGGCTAGATCGACTCAGTTATTAATCCTGATCAAGAA----TATATATACTTTATATTGCCGGAAACGCTTCCTTCTGCCTG-ATACATACT--TTT-----CA--ACGAAT--CTA-----GTATG---------------------GGGTA--------------------------------------------------------------------------------TAATTAC-----------------T----------------AA------TTCTTAT-----------------------TTAACAAATTT---TAAACAGAAGC---------------T--TAGAAC-------------------------------------------------------------------------------AGTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2r:2251688-2251867 + AT-AGCTCC--T------------GAGATC---------ACGACGTTTA----TAAGGACAAACAGACGGACAGGCGGACGGGCAGGGCCAGATCGACTCGGCTATTGGCCCTGATCAAGAAAATATACATATACTTTATATGGTCGGAAACGATTACTTCTGCATG-CTACATACT--TTT-----CA--AAGAAT--ATA-----T-----------------------------------------------------------------------------------------------------------------ATAT-----------------ATATAGTTAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_28:723816-724030 - G-------------------------------------------------------------ACGTTCATACGGACAAACAGACTTGGCTAGATCGACTCCGCTATGGATCCTGATCAAGAA----TATATATACTTAATATGTTCGGAATCGCTTCATTCTGCC----TACAAACG--TTT-----CA--ACAAAT--CTA-----GTATACCCTTTTGCTCTACGAGTAACTGGTA--------------------------------------------------------------------------------TAATAAA-----------------T----------------AAAATTTGAC-G-GA-----------------------TACTCGGTTCT---AACATAACATT---------------TAGGATAAC-------------------------------------------------------------------------------ATTTCATTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr2h_random_005:375606-375885 + A-----------------GTTCTTGAGATC---------TCGACG------------TTCAAACGGACGGACAGACAGACGAACATGGCCAGATCGACTGGGCTATTGATCCTGATCAAGTA----TATATTTACTTTATATGGTCGGAAACGCTTCCATCTGCCTG-TTATATACT--TTT-----CA--ACGAAT--CTA-----GTATACCCTTCTACTCTATGAATAACGGATA--------------------------------------------------------------------------------TAAAAAT-----------------G----------------GT----------------------GTTCGGCTTTT---ATTCTG--C-T--------AAAATT---------------A--G------------------------------------------------------------------------------------AATCAGTCCAATGTGTGACGCTT----------------------------------------------------------------------------------------------------ACGCTTTGCA---GGTTAGTTCAAATGATTGTTAGACCAATCT-A-------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4784:20783769-20783992 - T-----------------------GAGATC---------TCGAAT----------------TTCATACGAACGGACAGACAGACAATGCCAGATCGACTCGGCTAGTGATCCTGATCAAGAA----TATATATACTTT-TAGTGTCGGAAACGCTTCCTTCCACCCG-TTACATACT--TTT-----CA--ACGAAT--CTA-----GTATACCCTAT------AA-----AAATAAA----------------TGAA--------------------------------------------------------------------------------------------------AAT------CAACTATTAAAGAATGTTG---------------ATTTCTTAA---TACTTCAGAAC---------------T--TAGATC-------------------------------------------------------------------------------ATTCGATCTTAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AATATCACA--TA----AGTACATAAGATA---------TAAAAT--------GTCGGACGGACGGACAGACGGTTAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAGGAA----TATATATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGGTTACAC--TTATCCATTTTCACCACA--AATATA-----ATATA-------------------------------------------------------------------------------------------------------------------------------------AAGATAAAGATAAT------CAACCGTGA-----------------------CTTTCGCTTTT---TACACAAAAGC---------------G--GAAAGC-------------------------------------------------------------------------------ATTCAATCCAAAGCGT-ACGACC----------------------------------------------------------------------------------------------------ATGTGATTCG---GGCCATTATCGGTGACTGTCATGCCAAGCC-AC-TTGTCGTG------AGCTG----------------------------------------------------CTG---------GACTACTATTTTGAGGAGGATTCCGGCTGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................TAAGATA---------TAAAAT--------GTCGGACGGACGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000200
.......................................................CGGACGGACGGACAGACGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2031.0030000000030
......................................................TCGGACGGACGGACAGACGGTTAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000010
.......................TAAGATA---------TAAAAT--------GTCGGACGGACGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000010
........................................................GGACGGACGGACAGACGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1931.0030000000003
................................................................................................................................................TCGGAAACGATTCCTTCTGGACGGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.8040000000040
................................................................................................................................................TCGGAAACGATTCCTTCTGGACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.6030110000100
.............................................................................................................TGCTGATCAGGAA----TATATATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.4590400003020
.............................................................................................................TGCTGATCAGGAA----TATATATACTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25180.3970100004020
...........................................................................................................................................TAGGGTCGGAAACGATTCCTTCTGGACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.3570060001000
.........................................................GACGGACGGACAGACGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000000010
.............................................................................................................TGCTGATCAGGAA----TATATATACTTTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26180.3360000002130
.............................................................................................................TGCTGATCAGGAA----TATATATAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.2040000002020
.......................................................................................................................................TTTATAGGGTCGGAAACGATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040300010000
......................................................................................................CTATTGATGCTGATCAGGAA----T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530200100000
.............................................................................................................TGCTGATCAGGAA----TATATATACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530200001000
...............................................................................CAGACAGGGCTCAATCGACTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000030
..........................................................................................................TGATGCTGATCAGGAA----TATAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530100001010
...............................................................................CAGACAGGGCTCAATCGACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
.............................................................................GACAGACAGGGCTCAATCGACTCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000020
.............................................................................................................TGCTGATCAGGAA----TATATATACTTTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27150.0710000000010
.............................................................................................................TGCTGATCAGGAA----TATATATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
...........................................................................................................................................TAGGGTCGGAAACGATTCCTTCTGGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
...................................................................................................CGGCTATTGATGCTGATCAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
......................................................................................................CTATTGATGCTGATCAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010000
..........................................................................................................TGATGCTGATCAGGAA----TAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
............................................................................................................................................AGGGTCGGAAACGATTCCTTCTGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000010
......................................................................................................CTATTGATGCTGATCAGGAA----TA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
...................................................................................................CGGCTATTGATGCTGATCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
..................................................................................................................................TATACTTTATAGGGTCGGAAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
...........................................................................................................................................TAGGGTCGGAAACGATTCCTTCTGGACC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510000000010
.......................................................................................................TATTGATGCTGATCAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
...........................................................................................AATCGACTCGGCTATTGATGCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.........................................................................................................TTGATGCTGATCAGGAA----TATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
....................................................................................................................................TACTTTATAGGGTCGGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
......................................................................................................................................CTTTATAGGGTCGGAAACGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
droPer2
AATATCACA--TA----AGTACATAAGATA---------TAAAAT--------GTCGGACGGACGGACAGACGGTTAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAGGAA----TATATATACTTTATAGGGTCGGAAACGATTCCTTCTGGACGGTCA--CACTTATCCATTTTCACCACA--AATATA-----ATATA-------------------------------------------------------------------------------------------------------------------------------------AAGATAAAGATAAT------CAACCGTGA-----------------------CATTCGCTTTT---TACACAAAAGC---------------G--GAAAGC-------------------------------------------------------------------------------ATTCAATCCGAAGCGT-ACGACC----------------------------------------------------------------------------------------------------ATGTGATTCG---GGCCATTATCGGTGACTGTCATGCCAAGCC-AC-TTGTCGTGATGGTGATCATTTCCCAGCGTCCACCGTGCTCTGCCACCATAGCCGAGTAGGGCATGGGCAAGCTG---------GACTACTATTTTGAGGAGTATTCCGGCTGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................TCGGAAACGATTCCTTCTGGACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.898710000
.............................................................................................................TGCTGATCAGGAA----TATATATACTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25140.213021000
..............................................................................................................GCTGATCAGGAA----TATATATACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23160.132020000
....................................................................................................................................TACTTTATAGGGTCGGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102020000
......................................................................................................CTATTGATGCTGATCAGGAA----T.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000011
.............................................................................................................TGCTGATCAGGAA----TATATATACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24150.071010000
..............................................................................................................GCTGATCAGGAA----TATATATACTTTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.071010000
.............................................................................................................TGCTGATCAGGAA----TATATATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.061010000
..............................................................................................................GCTGATCAGGAA----TATATATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22180.061010000
............................................................................................................ATGCTGATCAGGAA----TATATAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
......................................................................................................CTATTGATGCTGATCAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
droWil2
GATAGCTCT--TA------------AGATGGCTGAGTAAAACGCGTACGCACCGACGGACAGACGGTCAGACGGACAGACGGACATGGCTATATCGACTTAGCTTCTCATGCTGATCAAGAA----TATATATACTTTATGGGGTCGGAAACGTCTCCTTCTGTGCG-TTACAAACA--TCT-----GA--CCAATT--TTA-----TAATACCCTCT------GC-----AAGGGTA--------------------------------------------------------------------------------TAATAAT-----------------A----------------AA------------A-----------------------CTCTTACGTTG---CTCGCAAATGC---------------G--G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................TGCTGATCAAGAA----TATATATACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24201.4028000280
.........................................................................................................................A----TATATATACTTTATGGGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15300030
...........................................................................................TATCGACTTAGCTTCTCATGCTGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200020
..........................GATGGCTGAGTAAAACGCGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200020
................................................................................................................................................................CTGTGCG-TTACAAACA--TCT-----GA--CCAATT--T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.10202000
......TCT--TA------------AGATGGCTGAGTAAAACGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
..............................................ACGCACCGACGGACAGACGGTCAGACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
..................................................................TCAGACGGACAGACGGACATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.................................................................................GACATGGCTATATCGACTTAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..................................................................TCAGACGGACAGACGGACATGGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05110000
......................................................................ACGGACAGACGGACATGGCTATATCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.............................................TACGCACCGACGGACAGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.............................................................................................TCGACTTAGCTTCTCATGCTGATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
....................................................................AGACGGACAGACGGACAT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05110000
.............................................................GACGGTCAGACGGACAGACGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
............................TGGCTGAGTAAAACGCGTACGCACCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.........................................................................................................................................TATGGGGTCGGAAACGTCTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
.............................................................................................TCGACTTAGCTTCTCATGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
.......................................................CGGACAGACGGTCAGACGGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..................................................................................................................................................................GTGCG-TTACAAACA--TCT-----GA--CCAATT--TTA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
............................TGGCTGAGTAAAACGCGTACGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
......................................................................................GGCTATATCGACTTAGCTTCTCATGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
........................................................................................................................................................................TTACAAACA--TCT-----GA--CCAATT--T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.............................................TACGCACCGACGGACAGACGGTCAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.................................................................................................................................ATATACTTTATGGGGTCGGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000
..............................................................................................................................................................TTCTGTGCG-TTACAAACA--TCT-----GA--CCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100010
.............................................TACGCACCGACGGACAGACGGTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
droVir3
AT---------------------------A---------CGGACG--------GACAGACGGACGGACGGACAGACAGACGGACACGGCTAGATCGACTCGGCTATTGATGCTGATCA-GAA----TATATATACTTTATGGAATTGGAGATGCTTCCTTCTGCCTG-TTACATACA--TTTGGATTTCGCACAAAT--ACA-----ATATACCCTTATACCCA--------------------------------------------------------------------------TTTTTAATGGGTTCAGGGTATAAAAAG---------------------------------C------CCAGCATTT-----------------------TTTTCG--ATA---TTCCTAGATGT---------------G--AACATT-------------------------------------------------------------------------------ATTTAATCAAAATCGT-AATACT----------------------------------------------------------------------------------------------------ATATCAT---------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................TACA--TTTGGATTTCGCACAAAT--ACA-----A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26203.75750000070000000000000000070000000610000000000000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.9018000000100000000000000000400010040030000500000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCACAAAT--A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.8517000000000000000000001000030060300000310000000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCACAAAT--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.85170000000000000000000000000000120000040001000000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.255000000400000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................TACATACA--TTTGGATTTCGCACAAAT--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.204002000000000000000000000002000000000000000000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCACAAAT--AC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TG-TTACATACA--TTTGGATTTCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102000000000000000000000000000002000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TTTAATGGGTTCAGGGTATAAAAAG---------------------------------C------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000010000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.102000000000000000000000000000000000000002000000000000000000000000
.......................................................................................GCTAGATCGACTCGGCTATTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000002000000000000000000000000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCACAAAT--ACA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.102000000000000000000000000000001000000010000000000000000000000000
.................................................................GACGGACAGACAGACGGACAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.091000000000000000000000000000000000010000000000000000000000000000
.T---------------------------A---------CGGACG--------GACAGACGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.061000000000000000000000000000010000000000000000000000000000000000
.T---------------------------A---------CGGACG--------GACAGACGGACGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061000000000000000000000000000010000000000000000000000000000000000
..............................................................................ACGGACACGGCTAGATCGACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GAGATGCTTCCTTCTGCCTG-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000010000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................ACA--TTTGGATTTCGCACAAAT--ACA-----A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
......................................................ACAGACGGACGGACGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................TTACATACA--TTTGGATTTCGCACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................CGCACAAAT--ACA-----ATATACCCTTATACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................CCTTCTGCCTG-TTACATACA--TTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................TATACCCTTATACCCA--------------------------------------------------------------------------TTTTTAATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
.......................................................................................................................................................TGCTTCCTTCTGCCTG-TTACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................CTTCCTTCTGCCTG-TTACATACA--TT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCACAAAT--ACA-----AT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000100000000000000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCACAAAT--ACA-----ATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................CATACA--TTTGGATTTCGCACAAAT--ACA-----A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000001000000000000000000000000000
.......................................................................................................TATTGATGCTGATCA-GAT----C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TTACATACA--TTTGGATTTCGCACAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCACAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................GACAGACGGACGGACGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TG-TTACATACA--TTTGGATTTCGCACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................CCTTCTGCCTG-TTACATACA--TTTGGATTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CTTCTGCCTG-TTACATACA--TTTGGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................TACA--TTTGGATTTCGCACAAAT--ACA-----G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
.............................A---------CGGACG--------GACAGACGGACGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TTTGGATTTCGCACAAAT--ACA-----ATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
...........................................................CGGACGGACGGACAGACAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................CCTG-TTACATACA--TTTGGATTTCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................CTG-TTACATACA--TTTGGATTTCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000100000000000000000000000000000
.....................................................GACAGACGGACGGACGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
-------------------------------------------------------CGGACGAACGGACGGACAGACAGACGGACAGGGCCAAATCGACTCAGCTCGTCGCCCTGATCAAGAA----TATATATACTTTGTGGGGTCTTCCACGCCTCCTTCTGCCTG-TTACATACT--TTT-----AA--TAAAAC--ATTGAACATTATACCCTGATTT---CC-----CA-----------------------------------------------------------------TTTTCAATGAGTTCAGGGTATAAAAAC-----------------A----------------CA------TAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAACAATTTTGGGTTGCCCGTT-------GAGA-------------------------------G-----------------------TG---GGTCACCATCGATGCCTGCCACGC---------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCATCGATGCCTGCCACGC---------------------------------------------------------------------------------------------------------------------------22200.90181530000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATCGATGCCTGCCACGC---------------------------------------------------------------------------------------------------------------------------20200.255500000
.......................................................................................................................................TTTGTGGGGTCTTCCACGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.244200020
.......................................................................................................................................TTTGTGGGGTCTTCCACGCCTCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.122000020
.....................................................................................GGGCCAAATCGACTCAGCTCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
.........................................................GACGAACGGACGGACAGACAGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24140.071100000
.......................................................................................................................................TTTGTGGGGTCTTCCACGCCTCCTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26160.061100000
.......................................................................................................................................TTTGTGGGGTCTTCCACGCCTCCTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25160.061000010
.......................................................................................................................................TTTGTGGGGTCTTCCACGCCTCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24160.061100000
......................................................................................................................................CTTTGTGGGGTCTTCCACGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22170.061000010
..............................................................................................................................................................................................................ATTATACCCTGATTT---CC-----CA-----------------------------------------------------------------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
.......................................................................................................................................................CGCCTCCTTCTGCCTG-TTACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
.......................................................................................................................................TTTGTGGGGTCTTCCACGCCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
.......................................................................................................................................TTTGTGGGGTCTTCCACGCCTCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCATCGATGCCTGCCA..............................................................................................................................19200.051000010
...................................................................................................................................................TCCACGCCTCCTTCTGCCTG-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
................................................................................................................................................TCTTCCACGCCTCCTTCTGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droGri2
T------------------------------------------------------CAAACAGACGGGTGGACGGACAGACGGATATGGCTCTATCGACTCGGTTGTTGAGCCTGATCAAGAA----TATATATACTTTATGGGGTCGGAGATGCTTCCTTCTGCTTG-TTACATACT--TTC-----GC--AAAAAA--CCA-----TTAT--------------------CAGGGTA----------------TAAAAAATCTTAAACGGT----------------------------------------------------------------------------------------------------TA-----------------------CTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
-------------------------------------------------------CAGACAGACAGACAGACGGACAGACGGACACGCTCACATCGACTCAGGAGGTGATCCTGATCAAGAA----TATATATACTTTATAAGGTCGGAGATGTCTCCTTCATTGCG-TAGCACACT--TTT-----GA--CCAAAA--TTA-----TAATACCCTCT------GC-----AAGGGTA--------------------------------------------------------------------------------TAAAAAT-----------------C----------------CA------AAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------TG----------------------ATATTGAAAAGCCTAAT-------GATATACAAGAAATAGATATATTTAATAAACGTGAGTCT------------TGGTCACTCGATTGGCTATTACCAAACGGTGTCATCCAAAGATCTCTTTATTTAAATTGTGAACTT----------------------------------------------------TTGGCCATAACGGA-----TTTTTGAGGAGG-----------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT------------TGGTCACTCGATTGGCTATTAC..........................................................................................................................................2511.001010000
........................................................................................TCACATCGACTCAGGAGGTGATCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.455050000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATCTCTTTATTTAAATTGTGAAC................................................................................................2730.331010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGTGAGTCT------------TGGTCACTCGAT....................................................................................................................................................25160.315140000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGTCT------------TGGTCACTCGATTGGCT...............................................................................................................................................24140.142110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGAGTCT------------TGGTCACTCGATTGG.................................................................................................................................................26140.142110000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGTGAGTCT------------TGGTCACTCGATTGG.................................................................................................................................................28140.142200000
.................................................................GACAGACGGACAGACGGACACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.141000001
..................................................................ACAGACGGACAGACGGACACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAAACGTGAGTCT------------TGGTCACTCG......................................................................................................................................................26160.132200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAAACGTGAGTCT------------TGGTCACTC.......................................................................................................................................................25160.132110000
.........................................................................................CACATCGACTCAGGAGGTGATCCTGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.101010000
.........................................................................................CACATCGACTCAGGAGGTGATCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.091010000
........................................................................................TCACATCGACTCAGGAGGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.081010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGTGAGTCT------------TGGTCACTCGATTG..................................................................................................................................................26140.071100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATAAACGTGAGTCT------------TGGTCACTCGA.....................................................................................................................................................29150.071010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATAAACGTGAGTCT------------TGGTCACT........................................................................................................................................................26150.071100000
........................................................................................TCACATCGACTCAGGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.071000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATAAACGTGAGTCT------------TGGTCACTC.......................................................................................................................................................27150.071010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACGTGAGTCT------------TGGTCACTCGA.....................................................................................................................................................25160.061010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATATATTTAATAAACGTGAGTCT------------................................................................................................................................................................26160.061010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTAATAAACGTGAGTCT------------TGGTCA..........................................................................................................................................................26160.061100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAACGTGAGTCT------------TGGTCACTCG......................................................................................................................................................25160.061100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGTGAGTCT------------TGGTCACTCGA.....................................................................................................................................................24160.061100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAAACGTGAGTCT------------TGGTCACTCGA.....................................................................................................................................................27160.061100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTAATAAACGTGAGTCT------------TGGTC...........................................................................................................................................................25160.061010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGTGAGTCT------------TGGTCACTCGATC...................................................................................................................................................26160.061010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAACGGTGTCATCCAAAGATCTCT.................................................................................................................27160.061100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGTGAGTCT------------TGGTCACTCGATT...................................................................................................................................................26160.061100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAAACGTGAGTCT------------TGGTC...........................................................................................................................................................21170.061010000
................................................................................................................................TATATACTTTATAAGGTCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
.......................................................CAGACAGACAGACAGACGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
..........................................................ACAGACAGACAGACGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000001
...........................................................................................CATCGACTCAGGAGGTGATCCTGATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051010000
droBip1
GAGACTAGT--TT----GCGTAGAAACAGA---------CAGACG--------GACAGACAGACGGACAGACGGACAGACGGACATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAA----TATATATACTTTATAGGGTCGGAAATGTCTCCTTCACTGCG-TTGCACACT--TTT-----GA--CCAAAA--TTA-----TAATACCCTCT------GC-----AAGGGTA----------------TAAAAAAGAGTAAAAAG---------------------------------------------------AAA-----------------G----------------CT----------------------GTATCTTTTTACCA--------------------------------------------------------------------------------------------------------------------------------TCTCAATCCAAAACTT-ACCACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
A----------------------------------------------------------CGGACAGACGGACGGACAGACGGACATGGCTAGATCGACTCGGCTGTTGATGCTGATCAAGAA----TATATATACTTTATAGGGTCGGAAAGGTCTCCTTCACTGCG-TTGCAAACT--TCT-----GA--CTGAAA--TTA-----TAATACCCT--------GC-----AAGGGTA--------------------------------------------------------------------------------TAATAACTGTACCAACATTAAGTTG----------------CA------AGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------TT----------------------GTGGTGGAAAGCCTGGTAACTTCAGAGA-------------------------------GTTCAAAAACTCCGTTGTATAATTTA---GTACATCATCGGGATCTGTCATG----------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TACA-------------------------------------TAGA--------ATCAGACAGACGGACCTACGGACAGACGTACAGACGGATTTCGATTCAGATCGTGATGCTGATCAAGAA----TATATATACTTTATAAGGTTTGAGGTGCCTCCTTCACTGCG-TTGCAAACG--CTT-----TG-------------------------CTCT------GC-----AAGGGTATAATAAAATGAGACAC------A---------------------------------------------------------TAA----------------------------TAAAGTTTTC------CGACCGTAA-----------------------TAA-CCTTATT---TACACAA-TTC---------------A--AGATGT-------------------------------------------------------------------------------ATTCAATCCGGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
-------------------------------------------------------CGGACGGACAGACGGACGGACAGACGGACATGGCTAGATCGACTCTACTAGTGATGCTGATCAAGAA----TATATATACTTTATAGGGTCGGAGACGTCTCCTTCACTGCG-TTGCAAACT--TTT-----GA--CTGAAA--TTA-----TAATACCCTCT------GC-----AAGGGTA----------------TAAAAATTACTAAAATATAACTTTTTTTATACCCTTGCAGAGGG------------------TATTAT-------------------------------------------------------------------------AA--------------------------------------------------------------------------------------------------------------------------------TTTCAGTCAGAAGTTT-GCAACG----------------------------------------------------------------------------------------------------CAGTGA----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAA------------------------------------CA------------GACGGACAGACGGACAGACGGACAGACGGACATGGCTATATCGACTCCCCTATTGATCCTGATCAAGAA----TATATATACTTTATA-GGTCGGAAACGTCTCATTCACTGCG-TTACAAACT--TCT-----GA--CCAAAA--TTA-----TAATACCGCGTC------------------------------------------------------------------------------------------------------------------------------AAGACAC---------------------G-----------------------ATTTAATCT---CCCCT--AAAATT---------------A--T------------------------------------------------------------------------------------TATA-----TAAAATT-GCCGAACTGTGCAGTAAATCTTCTCACCACAATATTCAACAGCATGAT-------GAAA-------------------------------T-----------------------TG---GGCTATTATC-----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AAGATC---------------------------------TCAGCGTTCA----TACAGACAGAAAGAAAGACGGACACACGAACACGGCTAGATCGACTCGGCTAGTGATCCTGATCAAGAA----TATATATACATTATGGGGTCGGAAACGCTTCCTTCTGCCTC-GTAAATACT--TTC-----CG--ACGAAT--CTA-----GTATACCCTTTTACTCTACGAGTAACGGGTA--------------------------------------------------------------------------------TAAAAAT-----------------A----------------TA----TCACTGAAA-----------------------C---------T---TACAAATAAAC---------------A--AAAAGC-------------------------------------------------------------------------------ACT-AATTTACACTGT-GTGTTT----------------------------------------------------------------------------------------------------ATGAAATTC-------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
T------------------------------------------------------CATACAGACAGACGGACGGACAGACG-ACATGGCTAGATCGACTCGGCTAGTGACCCTGATCAAGAA----TATATATACTTTATAGGGTCTGAAACGCTTCCTAATAGCTG-TTACATACT--TTT-----GC--ACGAAT--ACA-----ATATAC------------------TAGTGTT--------------------------------------------------------------------------------TAAAAAA---------------------------------CT-----------T-G-----------------------CTTTTGCTGCTGCTTCTAAAAAAGTGGCAGTCGCAGTCGAA--GCAAACGTAAAATCCGCGCACTGACGACTGTCAAAGCAAAAGCAAGTCGTTGCTTTCTGATTTTTAGCTGCTGCTGTGCTGTTGCTTTCAGTCGGTAGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AT-ATCTCT--TA---TAGTTCCTGAGATC---------CCAGCG--------TTCATACGGACAGACGGACAGACAGACGGACATGGCTCAATATACTTCGCTATTGATCCTGATTAGGAA----TATATATACTTTATAGGGTCGGAAACGCTTCCCTTCACCTG-TTACATACT--TTC-----CA--ACGAAT--CTA-----GTATACCCACTTACTCTACGATTAACGGGTA--------------------------------------------------------------------------------TAATAAC-----------------A----------------ACGCATCGAC---TA-----------------------CCTTCGCTTCT---GTCGCCAGCGC---------------A--GCAAGC-------------------------------------------------------------------------------ATGAAAACCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AATCTTTCAGCTTTTATAGTTCCTGAGATC---------TCG----------------ACGTTTTTACGGACGGACTGACGGATATGGCTAGATCGACTCAGTTATTAATCCTGATCAAGAA----TATATATACTTTATATTGCCGGAAACGCTTCCTTCTGCCTG-ATACATACT--TTT-----CA--ACGAAT--CTA-----GTATG---------------------GGGTA--------------------------------------------------------------------------------TAATTAC-----------------T----------------AA------TTCTTAT-----------------------TTAACAAATTT---TAAACAGAAGC---------------T--TAGAAC-------------------------------------------------------------------------------AGTAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
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ML-DmD16-C3		V132
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1182-2H		V148
mbn2		GSM1528798
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droSim2
AT-AGCTCC--T------------GAGATC---------ACGACGTTTA----TAAGGACAAACAGACGGACAGGCGGACGGGCAGGGCCAGATCGACTCGGCTATTGGCCCTGATCAAGAAAATATACATATACTTTATATGGTCGGAAACGATTACTTCTGCATG-CTACATACT--TTT-----CA--AAGAAT--ATA-----T-----------------------------------------------------------------------------------------------------------------ATAT-----------------ATATAGTTAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
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.....................................................TAAGGACAAACAGACGGACAGGCGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2821.00200000001000010000
.............................................TTTA----TAAGGACAAACAGACGGACAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.00200000011000000000
.............................................................................................................................................TGGTCGGAAACGATTACTTCTGCATG-C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.00200000000020000000
..............................................TTA----TAAGGACAAACAGACGGACAGGCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2921.00200000002000000000
...........................................................................................GATCGACTCGGCTATTGGCCCTGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.00200000000002000000
.......................................................AGGACAAACAGACGGACAGGCGGACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.00200000000000020000
......................................................AAGGACAAACAGACGGACAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00200000002000000000
.T-AGCTCC--T------------GAGATC---------ACGACGTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000000000010000
............................................GTTTA----TAAGGACAAACAGACGGACAGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000001000000000
.....................................................TAAGGACAAACAGACGGACAGGCGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000000010000
........................GAGATC---------ACGACGTTTA----TAAGGACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000001000000000
.............................................................................................................CCCTGATCAAGAAAATATACATATACTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000010000000000
...........T------------GAGATC---------ACGACGTTTA----TAAGGACAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000000010000
..................................................................................................................................TATACTTTATATGGTCGGAAACGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.50200000010001000000
........................................CGACGTTTA----TAAGGACAAACAGACGGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000000010000
.....................................................TAAGGACAAACAGACGGACAGGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000000010000
...........................................CGTTTA----TAAGGACAAACAGACGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000000010000
..................................................................ACGGACAGGCGGACGGGCAGGGCCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000000010000
...........................................................CAAACAGACGGACAGGCGGACGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000010000000000
.........................................................GACAAACAGACGGACAGGCGGACGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000001000000000
.................................................................GACGGACAGGCGGACGGGCAGGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000001000000000
......TCC--T------------GAGATC---------ACGACGTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100000001000000000
...........................................CGTTTA----TAAGGACAAACAGACGGACAGGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3020.50100000001000000000
...AGCTCC--T------------GAGATC---------ACGACGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100000000001000000
...............................................TA----TAAGGACAAACAGACGGACAGGCGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.50100000001000000000
..............................................................................................................................TACATATACTTTATATGGTCGGAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000001000000
.............................................................................................................................ATACATATACTTTATATGGTCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000010000000000
........................................CGACGTTTA----TAAGGACAAACAGACGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000010000000000
..............................................TTA----TAAGGACAAACAGACGGACAGGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000001000000000
......TCC--T------------GAGATC---------ACGACGTTTA----TAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000001000000000
......TCC--T------------GAGATC---------ACGACGTTTA----TAAGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000000001000000
...............................................TA----TAAGGACAAACAGACGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000001000000000
...............................................TA----TAAGGACAAACAGACGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100000000000010000
......TCC--T------------GAGATC---------ACGACGTTTA----TAAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000001000000000
..............................................TTA----TAAGGACAAACAGACGGACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000001000000000
.......................................................AGGACAAACAGACGGACAGGCGGACGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.50100000001000000000
.............................................TTTA----TAAGGACAAACAGACGGACAGGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000000010000
.............................................................................................................CCCTGATCAAGAAAATATACATATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000001000000000
................................................................................................................................CATATACTTTATATGGTCGGAAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000000010000
.T-AGCTCC--T------------GAGATC---------ACGACGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100000000010000000
.T-AGCTCC--T------------GAGATC---------ACGACGTTTA----T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000001000000
...............................................................................CGGGCAGGGCCAGATCGACTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000000000000000
...........T------------GAGATC---------ACGACGTTTA----TAAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000001000000000
AT-AGCTCC--T------------GAGATC---------ACGACGTTTA----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000000010000
............................................GTTTA----TAAGGACAAACAGACGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000000010000
..............................................TTA----TAAGGACAAACAGACGGACAGGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000000010000
.............................................TTTA----TAAGGACAAACAGACGGACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000000000010000
......................................................AAGGACAAACAGACGGACAGGCGGACGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3020.50100000010000000000
................................................A----TAAGGACAAACAGACGGACAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000000100000000
...........T------------GAGATC---------ACGACGTTTA----TAAGGACAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000000010000
..............................................................................ACGGGCAGGGCCAGATCGACTCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000000010000
.....................................................TAAGGACAAACAGACGGACAGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000001000000000
............................................GTTTA----TAAGGACAAACAGACGGACAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000000010000000
..................................................................ACGGACAGGCGGACGGGCAGGGCCAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000001000000000
.................................................................................................................................ATATACTTTATATGGTCGGAAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.45900000090000000000
....................................................................................................................................TACTTTATATGGTCGGAAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.38300000010110000000
....................................................................................AGGGCCAGATCGACTCGGCTATTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33100000000000010000
..................................................................................................................................TATACTTTATATGGTCGGAAACGATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33100000010000000000
.................................................................................................................................ATATACTTTATATGGTCGGAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.30600000050100000000
..................................................................................................................................TATACTTTATATGGTCGGAAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.29200000000110000000
.....................................................TAAGGACAAACAGACGGACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100000000000010000
...........................................................................................................................................TATGGTCGGAAACGATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1760.17100000000001000000
.......................................................................................................................................TTTATATGGTCGGAAACGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.11100000000001000000
.................................................................................................................................ATATACTTTATATGGTCGGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200000020000000000
....................................................................................................................................TACTTTATATGGTCGGAAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200000020000000000
.......................................................................................GCCAGATCGACTCGGCTAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.10200000000002000000
..................................................................................................................................TATACTTTATATGGTCGGAAACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000100010000
....................................................................................AGGGCCAGATCGACTCGGCTATTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.09100000000000010000
.....................................................................................................................................ACTTTATATGGTCGGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
........................................................................................................................................TTATATGGTCGGAAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
......................................................................................................................................CTTTATATGGTCGGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
..........................................................................................................................................................................ACATACT--TTT-----CA--AAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000010000000000
droSec2
G-------------------------------------------------------------ACGTTCATACGGACAAACAGACTTGGCTAGATCGACTCCGCTATGGATCCTGATCAAGAA----TATATATACTTAATATGTTCGGAATCGCTTCATTCTGCC----TACAAACG--TTT-----CA--ACAAAT--CTA-----GTATACCCTTTTGCTCTACGAGTAACTGGTA--------------------------------------------------------------------------------TAATAAA-----------------T----------------AAAATTTGAC-G-GA-----------------------TACTCGGTTCT---AACATAACATT---------------TAGGATAAC-------------------------------------------------------------------------------ATTTCATTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................AT--CTA-----GTATACCCTTTTGCTCTACGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.3310010
droYak3
A-----------------GTTCTTGAGATC---------TCGACG------------TTCAAACGGACGGACAGACAGACGAACATGGCCAGATCGACTGGGCTATTGATCCTGATCAAGTA----TATATTTACTTTATATGGTCGGAAACGCTTCCATCTGCCTG-TTATATACT--TTT-----CA--ACGAAT--CTA-----GTATACCCTTCTACTCTATGAATAACGGATA--------------------------------------------------------------------------------TAAAAAT-----------------G----------------GT----------------------GTTCGGCTTTT---ATTCTG--C-T--------AAAATT---------------A--G------------------------------------------------------------------------------------AATCAGTCCAATGTGTGACGCTT----------------------------------------------------------------------------------------------------ACGCTTTGCA---GGTTAGTTCAAATGATTGTTAGACCAATCT-A-------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................AGATC---------TCGACG------------TTCAAACGGACGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100100000000
...................................................................................................................................................GAAACGCTTCCATCTGCCTG-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.17101000000000
.......................................................................................GCCAGATCGACTGGGCTATTGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14100100000000
...................................................................................................................................................................................TTT-----CA--ACGAAT--CTA-----GTATACCCTTCTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2890.11100100000000
...................................................................................................................................................................................TTT-----CA--ACGAAT--CTA-----GTATACCCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.09100100000000
.....................................................................................................................................................................................T-----CA--ACGAAT--CTA-----GTATACCCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23130.08100100000000
................................................................................................................................TATTTACTTTATATGGTCGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.06101000000000
..............................................................................................CGACTGGGCTATTGATCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100100000000
.............................................................................GACGAACATGGCCAGATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100100000000
.............................................................................................TCGACTGGGCTATTGATCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
droEre2
T-----------------------GAGATC---------TCGAAT----------------TTCATACGAACGGACAGACAGACAATGCCAGATCGACTCGGCTAGTGATCCTGATCAAGAA----TATATATACTTT-TAGTGTCGGAAACGCTTCCTTCCACCCG-TTACATACT--TTT-----CA--ACGAAT--CTA-----GTATACCCTAT------AA-----AAATAAA----------------TGAA--------------------------------------------------------------------------------------------------AAT------CAACTATTAAAGAATGTTG---------------ATTTCTTAA---TACTTCAGAAC---------------T--TAGATC-------------------------------------------------------------------------------ATTCGATCTTAAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................TACT--TTT-----CA--ACGAAT--CTA-----GTATACCCTAT------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2960.1710000001
.........................................................................................CAGATCGACTCGGCTAGTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.0810100000

Generated: 05/18/2015 at 04:01 AM