ID:

dps_2288

Coordinate:

Unknown_group_99:20369-20519 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.5 -8.5 -8.4

Flybase annnotation

CDS [Dpse\GA29104-cds]; exon [dpse_GLEANR_9595:2]; intron [Dpse\GA29104-in]

No Repeatable elements found

mature
  1. Unknown_group_53:35459-35480 +
  2. dps_2288  Unknown_group_99:20490-20511 -
  3. Unknown_group_242:16309-16330 +
  4. Unknown_group_329:6722-6743 +
  5. Unknown_group_329:9035-9056 +
  6. Unknown_singleton_3729:1684-1705 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TTGGAGGATCCTTCACATTGGTAGCCCACTACCCAACGAGGGGGGCCAATGTGTGATCCTCCAAATAAACAAGGAAGCAGAGGATCTGCTATACCCCAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAATACATTGGAGAGAGTCGAAAAAATCTATTGAAAACGAACGCA
**************************************************(((.(((((((..................))))))))))................................................................................................................**************************************************
Read size # Mismatch Hit Count Total Norm Total M040
female body
SRR902010
ovaries
SRR902011
testis
M059
embryo
V112
male body
GSM343916
embryo
...GAGGATCCTTCACATTGGTAGCAC................................................................................................................................................................................................................................ 24 1 1 4.00 4 4 0 0 0 0 0
..........................................................CTCCAAATAAACAAGGAAGCAG........................................................................................................................................................................... 22 0 6 2.17 13 8 5 0 0 0 0
..........................................................CTCCAAATAAACAAGGAAGCAGAGG........................................................................................................................................................................ 25 0 6 2.17 13 8 3 2 0 0 0
..........................................................CTCCAAATAAACAAGGAAGCAGAG......................................................................................................................................................................... 24 0 6 1.00 6 3 2 1 0 0 0
............TCACATTGGTAGCACACTACCCAACGA.................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0
...GAGGATCCTTCACATTGGTAGCACA............................................................................................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
..........................................................CTCCAAATAAACAAGGAAGCAGAGA........................................................................................................................................................................ 25 1 6 0.67 4 1 3 0 0 0 0
.........................................................CCTCCAAATAAACAAGGAAGCAGAGG........................................................................................................................................................................ 26 0 6 0.67 4 1 3 0 0 0 0
...........................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTCG......................... 23 0 6 0.67 4 4 0 0 0 0 0
............................................................................................................................................................................................................................GAGTCGAAAAAATCTATTGAAAACG...... 25 0 5 0.60 3 2 0 0 0 1 0
.............CACATTGGTAGCCCACTACCCA........................................................................................................................................................................................................................ 22 0 11 0.55 6 6 0 0 0 0 0
.............CACATTGGTAGCCCACTACCCAA....................................................................................................................................................................................................................... 23 0 11 0.55 6 6 0 0 0 0 0
.........................................................CCTCCAAATAAACAAGGAAGCAGA.......................................................................................................................................................................... 24 0 6 0.50 3 2 0 0 1 0 0
..................TGGTAGCCCACTACCCAACGAGGGG................................................................................................................................................................................................................ 25 0 14 0.50 7 7 0 0 0 0 0
..........................................................CTCCAAATAAACAAGGAAGCA............................................................................................................................................................................ 21 0 6 0.50 3 3 0 0 0 0 0
.............CACATTGGTAGCTCACTACCC......................................................................................................................................................................................................................... 21 1 11 0.36 4 4 0 0 0 0 0
.............CACATTGGTAGCTCACTACCCAAC...................................................................................................................................................................................................................... 24 1 11 0.36 4 4 0 0 0 0 0
.............CACATTGGTAGCCCACTACCC......................................................................................................................................................................................................................... 21 0 11 0.36 4 4 0 0 0 0 0
..........................................................CTCCAAATAAACAAGGAAGCAGAGGATC..................................................................................................................................................................... 28 0 6 0.33 2 0 2 0 0 0 0
.........................................................CCTCCAAATAAACAAGGAAGCAG........................................................................................................................................................................... 23 0 6 0.33 2 2 0 0 0 0 0
..............................................................AAATAAACAAGGAAGCAGAGG........................................................................................................................................................................ 21 0 9 0.33 3 1 2 0 0 0 0
..........................................................CTCCAAATAAACCAGGAAGCAGAGG........................................................................................................................................................................ 25 1 6 0.33 2 2 0 0 0 0 0
.........................................................CCTCCAAATAAACAAGGAAGC............................................................................................................................................................................. 21 0 6 0.33 2 1 1 0 0 0 0
..........................................................CTCCAAATAAACAAGGAAGCAGA.......................................................................................................................................................................... 23 0 6 0.33 2 2 0 0 0 0 0
.............CACATTGGTAGCCCACTACCCAACG..................................................................................................................................................................................................................... 25 0 10 0.30 3 2 1 0 0 0 0
.............CACATTGGTAGCTCACTACCCAA....................................................................................................................................................................................................................... 23 1 11 0.27 3 3 0 0 0 0 0
.................................................TGTGTGATACTCCAAATAAACAAGGAAG.............................................................................................................................................................................. 28 1 8 0.25 2 0 2 0 0 0 0
.............CACATTGGTAGCTCACTACC.......................................................................................................................................................................................................................... 20 1 12 0.25 3 3 0 0 0 0 0
.............................................................CAAATAAACAAGGAAGCAGAG......................................................................................................................................................................... 21 0 9 0.22 2 0 2 0 0 0 0
............................................................................................................................................................................................................................TGGTCGAAAAAATCTATTGAAA......... 22 2 9 0.22 2 2 0 0 0 0 0
...................................................................AACAAGGAAGTAGAGGATCTG................................................................................................................................................................... 21 1 9 0.22 2 0 2 0 0 0 0
.............................................................................................................................................................................................................................AGTCGAAAAAATCTATTGAAAACG...... 24 0 5 0.20 1 1 0 0 0 0 0
.......................................................ATCCTCCAAATAAACAAGGAAGCAG........................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
........................................................TCCTCCAAATAAACAAGGAAGCA............................................................................................................................................................................ 23 0 5 0.20 1 1 0 0 0 0 0
.............CACATTGGTAGCTCACTACCCA........................................................................................................................................................................................................................ 22 1 11 0.18 2 2 0 0 0 0 0
..............................................CAATGTGTGATCCTCCAAATAAAA..................................................................................................................................................................................... 24 1 17 0.18 3 0 3 0 0 0 0
.........................................................CCTCCAAATAAACCAGGAAGCAGAGG........................................................................................................................................................................ 26 1 6 0.17 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTCGA........................ 24 0 6 0.17 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTT.......................... 22 1 6 0.17 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTCGAAA...................... 26 0 6 0.17 1 1 0 0 0 0 0
..........................................................CTCCAAATAAACAAGCAAGCAGAG......................................................................................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0
...........................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTC.......................... 22 0 6 0.17 1 0 1 0 0 0 0
...........................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTCGAA....................... 25 0 6 0.17 1 1 0 0 0 0 0
........................................................TCCTCCAAATAAACAAGGAAGCAAAACA....................................................................................................................................................................... 28 3 6 0.17 1 1 0 0 0 0 0
..........................................................CCCCAAATAAACAAGGAAGCAGA.......................................................................................................................................................................... 23 1 6 0.17 1 1 0 0 0 0 0
.........................................................CCTCCAAATAAACAAGGAAGCAGAGGA....................................................................................................................................................................... 27 0 6 0.17 1 0 0 1 0 0 0
..........................................................CTCCAAATAAACAAGGAAGCAGAGGA....................................................................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0
..........................................................CTCCAAATAAACAAGGAAGCAGAGGAT...................................................................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0 0
.........................................................CCTCCAAATAAACAAGCAAGCAGAG......................................................................................................................................................................... 25 1 6 0.17 1 0 1 0 0 0 0
..........................................................CTCCAAATAAACAAGGAAGGAGAGGA....................................................................................................................................................................... 26 1 6 0.17 1 1 0 0 0 0 0
.....................TAGCCCACTACCCAACGAGGGGGG.............................................................................................................................................................................................................. 24 0 20 0.15 3 2 0 1 0 0 0
..........................................................CTCCAAATAAACAAGGAAGCAGAA......................................................................................................................................................................... 24 1 7 0.14 1 1 0 0 0 0 0
.........................................................CCTCCAAATAAACAAGGAAGCAGAA......................................................................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0
..........................................................CTCCAAATAAACAAAGAAGCAGAGG........................................................................................................................................................................ 25 1 7 0.14 1 1 0 0 0 0 0
.................TTGGTAGCCCACTACCCAACGAGGGGG............................................................................................................................................................................................................... 27 0 14 0.14 2 1 0 0 1 0 0
..............ACATTGGTAGCCCACTACCC......................................................................................................................................................................................................................... 20 0 14 0.14 2 2 0 0 0 0 0
..................TGGTAGCCCACTACCCAACGAGGG................................................................................................................................................................................................................. 24 0 14 0.14 2 2 0 0 0 0 0
...........................................................................................................................................................................................................................ATGGTCGAAAAAATCTATTGAAAC........ 24 3 7 0.14 1 1 0 0 0 0 0
..........................................................CTCCAAATAAACAAAGAAGCAGAGGA....................................................................................................................................................................... 26 1 7 0.14 1 1 0 0 0 0 0
..................TGGTAGCCCACTACCCAACGAGG.................................................................................................................................................................................................................. 23 0 14 0.14 2 1 0 0 0 0 1
..........................................................CTCCAAATAAATAAGGAAGCAGAGGAT...................................................................................................................................................................... 27 1 8 0.13 1 0 0 0 1 0 0
..........................................................CTCCAAATAAATAAGGAAGCAGAGGATC..................................................................................................................................................................... 28 1 8 0.13 1 1 0 0 0 0 0
...........................................................TCCAAATAAACAAGGAAGCAGA.......................................................................................................................................................................... 22 0 9 0.11 1 1 0 0 0 0 0
...........................................................TCCAAATAAACAAGGAAGCAGAG......................................................................................................................................................................... 23 0 9 0.11 1 1 0 0 0 0 0
....................................................................ACAAGGAAGCAGAGGATCTG................................................................................................................................................................... 20 0 9 0.11 1 0 0 1 0 0 0
.........................CCACTACCCAACGAGGGGGGCC............................................................................................................................................................................................................ 22 0 19 0.11 2 2 0 0 0 0 0
................................................................ATAAACAAGGAAGCAGAGG........................................................................................................................................................................ 19 0 10 0.10 1 0 0 1 0 0 0
..............................................................AAATAAACAAGGCAGCAGAGGATC..................................................................................................................................................................... 24 1 10 0.10 1 0 0 0 1 0 0
.............CACATTGGTAGCCCACTACCCAACGAGG.................................................................................................................................................................................................................. 28 0 10 0.10 1 1 0 0 0 0 0
.............CACATTGGTAGCTCACTACCCAACGA.................................................................................................................................................................................................................... 26 1 10 0.10 1 1 0 0 0 0 0
.............CACATTGGTAGCCCACTACCCAACGA.................................................................................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0
..................................................................AAACAAGGAAGCAGAGGATCT.................................................................................................................................................................... 21 0 10 0.10 1 0 0 0 0 1 0
...........................................................TCCAAATAAACAAAGAAGCAGAGGA....................................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0
.....................TAGCCCACTACCCAACGAGGGG................................................................................................................................................................................................................ 22 0 20 0.10 2 2 0 0 0 0 0
.............CACATTGGTAGCTCACTACCCAACG..................................................................................................................................................................................................................... 25 1 10 0.10 1 1 0 0 0 0 0
........................................GGGGGCCAGTGTGTGATC................................................................................................................................................................................................. 18 1 20 0.10 2 2 0 0 0 0 0
.................................................................TAAACAAGGAAGCAGAGG........................................................................................................................................................................ 18 0 10 0.10 1 1 0 0 0 0 0
..................TGGTAGACCACTACCCAACGAGGGGGGC............................................................................................................................................................................................................. 28 1 11 0.09 1 1 0 0 0 0 0
..................TGGTAGCCCACTACCCAACGAGGGGGG.............................................................................................................................................................................................................. 27 0 11 0.09 1 1 0 0 0 0 0
.................TTGGTAGCCCACTACCCAACGAGGGGGGC............................................................................................................................................................................................................. 29 0 11 0.09 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................TTTGAGAGACTCGAAAAAA................... 19 2 11 0.09 1 1 0 0 0 0 0
.................................................................TAAATAAGGAAGCAGAGGATCTGC.................................................................................................................................................................. 24 1 11 0.09 1 0 0 0 1 0 0
...................................................................AATAAGGAAGCAGAGGATCTGC.................................................................................................................................................................. 22 1 11 0.09 1 0 0 0 1 0 0
..................TGGTAGCCCACTACCCAACGAGGGGGGC............................................................................................................................................................................................................. 28 0 11 0.09 1 1 0 0 0 0 0
.................TTGGTAGCCCACTACCCAACGAGGGGGG.............................................................................................................................................................................................................. 28 0 11 0.09 1 1 0 0 0 0 0
.............CACATTGGTAGCCCACTAA........................................................................................................................................................................................................................... 19 1 12 0.08 1 1 0 0 0 0 0
.............CACATTGGTAGCCCACTAC........................................................................................................................................................................................................................... 19 0 12 0.08 1 0 0 0 0 0 1
.............CACATTGGTAGCCCACTACC.......................................................................................................................................................................................................................... 20 0 12 0.08 1 1 0 0 0 0 0
..............ACATTGGTAGCCCACTACCCAACG..................................................................................................................................................................................................................... 24 0 13 0.08 1 1 0 0 0 0 0
.................................................TGTGTGATCCTCCAAATAAACAAGGA................................................................................................................................................................................ 26 0 13 0.08 1 0 1 0 0 0 0
.................TTGGTAGCCCACTACCCAACGAGGGGGC.............................................................................................................................................................................................................. 28 1 14 0.07 1 1 0 0 0 0 0
..................TGGTAGCCCACTACCCAACGAGGGGG............................................................................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0 0
.................TTGGTAGCCCACTACCCAACGAGGAA................................................................................................................................................................................................................ 26 2 14 0.07 1 1 0 0 0 0 0
..................TGGCAGCCCACTACACAACGAGGG................................................................................................................................................................................................................. 24 2 14 0.07 1 0 0 0 1 0 0
..................TGGTAGCCCACTACCCAATGAGGGGG............................................................................................................................................................................................................... 26 1 14 0.07 1 1 0 0 0 0 0
.................TTGGTAGCCCACTACCCAACGAGG.................................................................................................................................................................................................................. 24 0 14 0.07 1 1 0 0 0 0 0
.................TTGGTAGCCCAATACCCAACGAGGTGG............................................................................................................................................................................................................... 27 2 14 0.07 1 0 0 0 1 0 0
...............CATTGGTAGCCCACTACCC......................................................................................................................................................................................................................... 19 0 14 0.07 1 1 0 0 0 0 0
..............ACATTGGTAGCTCACTACCCA........................................................................................................................................................................................................................ 21 1 15 0.07 1 1 0 0 0 0 0
..........................................................CTCCAAATAAACAAGGATGCAGAG......................................................................................................................................................................... 24 1 15 0.07 1 1 0 0 0 0 0
.............AACATTGGTAGCTCACTACCCAACG..................................................................................................................................................................................................................... 25 2 15 0.07 1 1 0 0 0 0 0
..............ACATTGGTAGCTCACTACCC......................................................................................................................................................................................................................... 20 1 15 0.07 1 1 0 0 0 0 0
......................................................................................................................................................................................................................TGGAGAGTGTCGAAAAAAA.................. 19 2 15 0.07 1 1 0 0 0 0 0
..............................................CAATGTGTGATCCTCCAAATAAAAA.................................................................................................................................................................................... 25 1 16 0.06 1 1 0 0 0 0 0
...................GGTAGCCCACTACCCAACGAGGGGGG.............................................................................................................................................................................................................. 26 0 17 0.06 1 1 0 0 0 0 0
..............................................CAATGTGTGATCCTCCAAATAAA...................................................................................................................................................................................... 23 0 17 0.06 1 1 0 0 0 0 0
..............................................CAATGTGTGATCCTCCAAACT........................................................................................................................................................................................ 21 2 17 0.06 1 1 0 0 0 0 0
.....................TAGCCCACTACCCAACGAGGGGGGCC............................................................................................................................................................................................................ 26 0 19 0.05 1 1 0 0 0 0 0
.........................CCACTACCCAACGAGGGGGGCCAGT......................................................................................................................................................................................................... 25 1 19 0.05 1 1 0 0 0 0 0
.........................CCACTACCCAACGAGGGGGGC............................................................................................................................................................................................................. 21 0 19 0.05 1 1 0 0 0 0 0
.........................CCACTACCCAACGAGGGGGGT............................................................................................................................................................................................................. 21 1 20 0.05 1 0 0 0 0 0 1
....................TTAGCCCACTACCCAACGAGGGGGG.............................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
.........................CCGCTACCCAACGAGGGGGGCC............................................................................................................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0
.........................CCACTACCCAACGAGGGGGG.............................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
.....................TAGCCCACTACCCAACGAGGGGGGT............................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
...........................ACTACCCAACGAGGGGGGCCA........................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
.......................................GGGGGGCCAATGTGTGAT.................................................................................................................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0
........................................GGGGGCCAATGTGGGATGC................................................................................................................................................................................................ 19 2 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

AACCTCCTAGGAAGTGTAACCATCGGGTGATGGGTTGCTCCCCCCGGTTACACACTAGGAGGTTTATTTGTTCCTTCGTCTCCTAGACGATATGGGGTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTTATGTAACCTCTCTCAGCTTTTTTAGATAACTTTTGCTTGCGT
**************************************************(((.(((((((..................))))))))))................................................................................................................**************************************************
Read size # Mismatch Hit Count Total Norm Total M040
female body
SRR902010
ovaries
M059
embryo
SRR902011
testis
GSM343916
embryo
V112
male body
M062
head
M022
male body
GSM444067
head
.....................................................................GTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 24 0 7 70.14 491 489 0 0 2 0 0 0 0 0
...........................................CCGGTCACACACTAGGAGGTTTATT....................................................................................................................................................................................... 25 1 17 25.94 441 276 96 58 3 3 5 0 0 0
...................................................................TTATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 26 1 7 21.57 151 125 24 2 0 0 0 0 0 0
...........................................CCGGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 24 1 17 19.94 339 207 84 38 5 2 3 0 0 0
...................................................................TTGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 26 0 7 14.86 104 94 6 2 2 0 0 0 0 0
......................................................................TTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 23 0 7 14.71 103 103 0 0 0 0 0 0 0 0
............................................CGGTCACACACTAGGAGGTTTATT....................................................................................................................................................................................... 24 1 17 13.41 228 136 53 12 12 5 10 0 0 0
............................................CGGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 23 1 17 11.18 190 97 57 10 15 4 5 0 1 1
....................................................................TGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 25 0 7 10.43 73 69 0 0 2 2 0 0 0 0
..........................................CCCGGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 25 1 16 9.56 153 77 29 35 2 2 5 2 1 0
.............................................GGTCACACACTAGGAGGTTTATT....................................................................................................................................................................................... 23 1 18 7.44 134 78 49 2 4 0 1 0 0 0
.............................................GGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 22 1 18 7.06 127 83 37 3 4 0 0 0 0 0
...........................................CCCGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 24 1 16 6.75 108 71 5 29 0 3 0 0 0 0
...................................................................TTGTTCCTTCATCTCCTAGACGATAT.............................................................................................................................................................. 26 1 7 5.86 41 39 2 0 0 0 0 0 0 0
...........................................CCCGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 25 1 16 5.38 86 63 1 17 0 5 0 0 0 0
.....................................................................GTTCCTTCGTCTCCTAGACGATA............................................................................................................................................................... 23 0 7 5.29 37 37 0 0 0 0 0 0 0 0
.....................................................................GTTCCTTCATCTCCTAGACGATAT.............................................................................................................................................................. 24 1 7 4.57 32 31 1 0 0 0 0 0 0 0
....................................................................TATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 25 1 7 4.14 29 25 4 0 0 0 0 0 0 0
.....................................................................GTTCCTTCCTCTCCTAGACGATAT.............................................................................................................................................................. 24 1 7 4.00 28 28 0 0 0 0 0 0 0 0
..........................................CCCCGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 25 1 15 3.47 52 41 1 9 0 1 0 0 0 0
.........................................CCCCGGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 26 1 16 3.06 49 29 6 10 2 0 2 0 0 0
...........................................................................TCGTCTCCTAGACGATATGGGGT......................................................................................................................................................... 23 0 6 3.00 18 18 0 0 0 0 0 0 0 0
..........................................CCCGGTCACACACTAGGAGGTTTATT....................................................................................................................................................................................... 26 1 16 2.75 44 29 7 7 0 1 0 0 0 0
.....................................................................GTTTCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 24 1 7 2.71 19 18 0 0 0 1 0 0 0 0
.....................................................................GTTCCTACGTCTCCTAGACGATAT.............................................................................................................................................................. 24 1 7 2.71 19 19 0 0 0 0 0 0 0 0
...........................................................................TCGTCTCCTAGACGATATGGGGTT........................................................................................................................................................ 24 0 6 2.50 15 15 0 0 0 0 0 0 0 0
............................................CCGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 23 1 16 2.50 40 33 0 4 0 2 1 0 0 0
........................................................................CCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 21 0 7 2.43 17 15 1 1 0 0 0 0 0 0
.......................................................................TCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 22 0 7 2.43 17 12 1 4 0 0 0 0 0 0
..........................................CCCCGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 26 1 15 2.07 31 26 1 4 0 0 0 0 0 0
........AGGAAGTGTAACCATCGGGTGATGGGT........................................................................................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0
............................GATGGGTTGCTCCCCCCGGTCACACACT................................................................................................................................................................................................... 28 1 13 1.92 25 21 1 3 0 0 0 0 0 0
.............................................CGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 22 1 17 1.88 32 27 0 2 0 3 0 0 0 0
..............................................GTCACACACTAGGAGGTTTATT....................................................................................................................................................................................... 22 1 19 1.74 33 30 1 1 1 0 0 0 0 0
...................................................................AAGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 26 2 7 1.57 11 11 0 0 0 0 0 0 0 0
..........................................CCCGGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 26 0 14 1.50 21 16 0 3 0 0 2 0 0 0
....................................................................TGTTCCTTCATCTCCTAGACGATAT.............................................................................................................................................................. 25 1 7 1.43 10 9 0 1 0 0 0 0 0 0
..............................................GTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 21 1 19 1.42 27 24 0 1 1 1 0 0 0 0
............................GATGGGTTGCTCCCCCCGGTCACACAC.................................................................................................................................................................................................... 27 1 13 1.38 18 14 2 2 0 0 0 0 0 0
............................................CGGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 24 0 15 1.33 20 16 3 0 0 0 1 0 0 0
..............................................GTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 21 0 17 1.29 22 19 0 0 0 3 0 0 0 0
....................................................................TGTTCCTTCCTCTCCTAGACGATAT.............................................................................................................................................................. 25 1 7 1.29 9 9 0 0 0 0 0 0 0 0
.....................................................................ATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 24 1 7 1.29 9 9 0 0 0 0 0 0 0 0
........................................CCCCCGGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 27 1 16 1.25 20 12 4 2 0 0 0 1 0 1
.......................................CCCCCCGGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 28 1 14 1.21 17 11 1 1 4 0 0 0 0 0
...................................................................TTATTCCTTCGTCTCCTAGACGATA............................................................................................................................................................... 25 1 7 1.14 8 8 0 0 0 0 0 0 0 0
......................................................................TTCCTTCGTCTCCTAGACGATA............................................................................................................................................................... 22 0 7 1.14 8 8 0 0 0 0 0 0 0 0
....................................................................AGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 25 1 7 1.14 8 8 0 0 0 0 0 0 0 0
.........................................CCCCCGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 26 1 15 1.13 17 12 3 2 0 0 0 0 0 0
............................................CCGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 24 1 16 1.06 17 9 0 8 0 0 0 0 0 0
..................................................................AAAGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 27 3 7 1.00 7 7 0 0 0 0 0 0 0 0
AACCTCCTAGGAAGTGTAACCATCG.................................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....CCTAGGAAGTGTAACCATCGTGTGAT............................................................................................................................................................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...................................................................TTGTTCCTTCCTCTCCTAGACGATAT.............................................................................................................................................................. 26 1 7 1.00 7 7 0 0 0 0 0 0 0 0
....................................................................TGTTCCTTCGTCTCCTAGACGATA............................................................................................................................................................... 24 0 7 1.00 7 7 0 0 0 0 0 0 0 0
........................................CCCCCCGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 27 1 15 1.00 15 15 0 0 0 0 0 0 0 0
.......................................CCCCCCCGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 28 1 12 1.00 12 10 1 0 0 0 1 0 0 0
.............................................CGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 23 1 17 0.94 16 14 0 0 0 2 0 0 0 0
............................................CGGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 23 0 15 0.93 14 10 0 0 3 0 1 0 0 0
..............................................GTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 22 0 17 0.88 15 10 4 0 0 1 0 0 0 0
...........................................CCGGTCACACACTAGGAGGTTTA......................................................................................................................................................................................... 23 1 17 0.88 15 13 1 0 0 0 1 0 0 0
..........................................CCCGGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 25 0 14 0.86 12 6 1 3 0 1 0 0 1 0
...................................................................TTGTTCCTTCATCTCCTAGACGATA............................................................................................................................................................... 25 1 7 0.86 6 6 0 0 0 0 0 0 0 0
...................................................................ATGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 26 1 7 0.86 6 5 0 1 0 0 0 0 0 0
............................................................................CGTCTCCTAGACGATATGGGGTT........................................................................................................................................................ 23 0 7 0.86 6 2 3 1 0 0 0 0 0 0
....................................................................TATTCCTTCGTCTCCTAGACGATA............................................................................................................................................................... 24 1 7 0.86 6 6 0 0 0 0 0 0 0 0
.............................................................................GTCTCCTAGACGATATGGGGTT........................................................................................................................................................ 22 0 7 0.86 6 4 2 0 0 0 0 0 0 0
.............................ATGGGTTGCTCCCCCCGGTCACACACT................................................................................................................................................................................................... 27 1 13 0.85 11 10 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCTACCAGCTTTTTTAGATAACT........... 23 3 6 0.83 5 5 0 0 0 0 0 0 0 0
.........................................................................CTTCGTCTCCTAGACGATATGGGGT......................................................................................................................................................... 25 0 6 0.83 5 4 0 0 0 1 0 0 0 0
...........................................CCGGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 24 0 15 0.80 12 6 3 1 1 1 0 0 0 0
...........................................CCGGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 25 0 15 0.73 11 9 0 1 0 0 1 0 0 0
...................................................................ATATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 26 2 7 0.71 5 5 0 0 0 0 0 0 0 0
......................................................................TTCCTTCATCTCCTAGACGATAT.............................................................................................................................................................. 23 1 7 0.71 5 5 0 0 0 0 0 0 0 0
...........................................CCCGTTACACACTAGGAGGTTTA......................................................................................................................................................................................... 23 1 17 0.71 12 11 0 1 0 0 0 0 0 0
............................................CGGTCACACACTAGGAGGTTTA......................................................................................................................................................................................... 22 1 17 0.65 11 7 2 2 0 0 0 0 0 0
...........................................CCGGTCACACACTAGGAGGTTTATTT...................................................................................................................................................................................... 26 1 17 0.65 11 4 6 1 0 0 0 0 0 0
.........................................CCCCGGTCACACACTAGGAGGTTTATT....................................................................................................................................................................................... 27 1 16 0.63 10 8 0 2 0 0 0 0 0 0
...........................................CCGGTCACACACTAGGAGGTTT.......................................................................................................................................................................................... 22 1 17 0.59 10 6 1 2 0 1 0 0 0 0
...........................................CCGGTCACACACTAGGAGGTTTAGT....................................................................................................................................................................................... 25 2 17 0.59 10 0 0 10 0 0 0 0 0 0
.............................................GGTCACACACTAGGAGGTT........................................................................................................................................................................................... 19 1 19 0.58 11 10 0 0 0 1 0 0 0 0
..................................................................ATTGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 27 1 7 0.57 4 2 2 0 0 0 0 0 0 0
...................................................................TTGTTCCTTCGTCTCCTAGACGAT................................................................................................................................................................ 24 0 7 0.57 4 3 1 0 0 0 0 0 0 0
......................................................................TTCCTTCCTCTCCTAGACGATAT.............................................................................................................................................................. 23 1 7 0.57 4 3 0 0 1 0 0 0 0 0
..................................................................TTTATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 27 1 7 0.57 4 4 0 0 0 0 0 0 0 0
.............................................................................GTCTCCTAGACGATATGGGGT......................................................................................................................................................... 21 0 9 0.56 5 5 0 0 0 0 0 0 0 0
............................................................................CGTCTCCTAGACGATATGGGGT......................................................................................................................................................... 22 0 9 0.56 5 5 0 0 0 0 0 0 0 0
...........................................CCGGTCACACACTAGGAGGTT........................................................................................................................................................................................... 21 1 18 0.56 10 7 0 2 0 1 0 0 0 0
............................................CGGTCACACACTAGGAGTTTTATT....................................................................................................................................................................................... 24 2 17 0.53 9 0 8 0 1 0 0 0 0 0
...........................................CCCGTTACACACTAGGAGGTTTGT........................................................................................................................................................................................ 24 2 16 0.50 8 0 0 8 0 0 0 0 0 0
................................GGTTGCTCCCCCCGGTCACACACT................................................................................................................................................................................................... 24 1 16 0.50 8 8 0 0 0 0 0 0 0 0
...........................................................................TCGTCTCCTAGACGATATGGGG.......................................................................................................................................................... 22 0 6 0.50 3 3 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................CTTATGTAACCTCTCTCAGCTTTT..................... 24 0 6 0.50 3 3 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTACCAGCTTTTTTAGATAACT........... 22 2 6 0.50 3 2 0 1 0 0 0 0 0 0
.........................................CCCCGGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 27 0 14 0.50 7 5 0 2 0 0 0 0 0 0
..........................................................................TTCGTCTCCTAGACGATATGGGGTT........................................................................................................................................................ 25 0 6 0.50 3 3 0 0 0 0 0 0 0 0
..............................TGGGTTGCTCCCCCCGGTCACACACT................................................................................................................................................................................................... 26 1 13 0.46 6 6 0 0 0 0 0 0 0 0
.............................................GGTCACACACTAGGAGGTTTA......................................................................................................................................................................................... 21 1 18 0.44 8 7 0 0 1 0 0 0 0 0
....................................................................TGTTTCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 25 1 7 0.43 3 3 0 0 0 0 0 0 0 0
...................................................................TTGTTTCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 26 1 7 0.43 3 3 0 0 0 0 0 0 0 0
...................................................................AAATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 26 3 7 0.43 3 3 0 0 0 0 0 0 0 0
.........................................................................CTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 20 0 7 0.43 3 3 0 0 0 0 0 0 0 0
.....................................................................GTTCCTTCCTCTCCTAGACGATA............................................................................................................................................................... 23 1 7 0.43 3 3 0 0 0 0 0 0 0 0
.....................................................................GTTCCTTCGTCTCCTAGACGATATG............................................................................................................................................................. 25 0 7 0.43 3 3 0 0 0 0 0 0 0 0
.................................................................AATTGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 28 1 7 0.43 3 1 2 0 0 0 0 0 0 0
.................................................................AAAAGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 28 3 7 0.43 3 3 0 0 0 0 0 0 0 0
.............................................................................GTCTCCTAGACGATATGGGGTTCA...................................................................................................................................................... 24 0 7 0.43 3 3 0 0 0 0 0 0 0 0
..................................................................TTTGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 27 0 7 0.43 3 2 0 1 0 0 0 0 0 0
...............................................TCACACACTAGGAGGTTTATT....................................................................................................................................................................................... 21 1 19 0.42 8 7 0 1 0 0 0 0 0 0
............................................CGGTCACACACTAGGAGGTTTAGT....................................................................................................................................................................................... 24 2 17 0.41 7 0 0 7 0 0 0 0 0 0
..........................................CCCGGTCACACACTAGGAGGTT........................................................................................................................................................................................... 22 1 17 0.41 7 5 0 2 0 0 0 0 0 0
...........................................CCGGTCACACACTAGGAGTTTTATT....................................................................................................................................................................................... 25 2 17 0.41 7 5 1 1 0 0 0 0 0 0
...........................................ACGGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 24 2 17 0.41 7 6 0 1 0 0 0 0 0 0
............................................CGGTCACACACTAGGAGGTT........................................................................................................................................................................................... 20 1 18 0.39 7 7 0 0 0 0 0 0 0 0
...............GTAACCATCGGGTGATGGGTTGCT.................................................................................................................................................................................................................... 24 0 13 0.38 5 5 0 0 0 0 0 0 0 0
..........................................CCCCGTTACACACTAGGAGGTTTA......................................................................................................................................................................................... 24 1 16 0.38 6 6 0 0 0 0 0 0 0 0
.............................................GGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 23 0 16 0.38 6 4 2 0 0 0 0 0 0 0
..........................................CCCGGTCACACACTAGGAGGTTTA......................................................................................................................................................................................... 24 1 16 0.38 6 3 0 3 0 0 0 0 0 0
.............................................GGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 22 0 16 0.38 6 4 0 0 2 0 0 0 0 0
.......................................CCCCCCGGTCACACACTAGGAGGTTT.......................................................................................................................................................................................... 26 1 14 0.36 5 5 0 0 0 0 0 0 0 0
...........................................CCGGTCACACACTAGGAGGTTTGT........................................................................................................................................................................................ 24 2 17 0.35 6 0 0 6 0 0 0 0 0 0
.......................................CCCCCCCGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 29 1 12 0.33 4 3 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TACCAGCTTTTTTAGATAACT........... 21 2 6 0.33 2 2 0 0 0 0 0 0 0 0
.........................................................................AAACGTCTCCTAGACGATATGGGGTT........................................................................................................................................................ 26 3 6 0.33 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CCCTACCAGCTTTTTTAGATAACT........... 24 3 6 0.33 2 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TTATGTAACCTCTCTCAGCTTTT..................... 23 0 6 0.33 2 2 0 0 0 0 0 0 0 0
............................................CGGTCACACACTAGGAGGTTTATTTGT.................................................................................................................................................................................... 27 1 15 0.33 5 3 0 0 1 0 1 0 0 0
................................................CACACACTAGGAGGTTTATTTGTT................................................................................................................................................................................... 24 1 16 0.31 5 2 2 1 0 0 0 0 0 0
..........................................CCCGGTCACACACTAGGAGGTTT.......................................................................................................................................................................................... 23 1 16 0.31 5 4 0 1 0 0 0 0 0 0
........................................CCCCCGGTCACACACTAGGAGGTTTATT....................................................................................................................................................................................... 28 1 16 0.31 5 3 0 0 2 0 0 0 0 0
.......................................CCCCCCCGTTACACACTAGGAGGTTTA......................................................................................................................................................................................... 27 1 13 0.31 4 4 0 0 0 0 0 0 0 0
.......................................................................TTCCTTGTCTCCTAGACGATAT.............................................................................................................................................................. 22 3 10 0.30 3 3 0 0 0 0 0 0 0 0
...........................................TCGGTCACACACTAGGAGGTTTATT....................................................................................................................................................................................... 25 2 17 0.29 5 2 1 0 2 0 0 0 0 0
..........................................TCCGGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 25 2 17 0.29 5 4 0 1 0 0 0 0 0 0
...........................................ACGGTCACACACTAGGAGGTTTATT....................................................................................................................................................................................... 25 2 17 0.29 5 4 0 0 0 1 0 0 0 0
.....................................................................GTTCCTACGTCTCCTAGACGATA............................................................................................................................................................... 23 1 7 0.29 2 2 0 0 0 0 0 0 0 0
............................................................................CGTCTCCTAGACGATATGGGGTTCA...................................................................................................................................................... 25 0 7 0.29 2 2 0 0 0 0 0 0 0 0
..................................................................ATTGTTCCTTCGTCTCCTAGACGATA............................................................................................................................................................... 26 1 7 0.29 2 2 0 0 0 0 0 0 0 0
.......................................CCCCCCCGTTACACACTAGGAGGTT........................................................................................................................................................................................... 25 1 14 0.29 4 3 0 1 0 0 0 0 0 0
..................................................................AATGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 27 2 7 0.29 2 2 0 0 0 0 0 0 0 0
.........................................................................CTTCCTCTCCTAGACGATAT.............................................................................................................................................................. 20 1 7 0.29 2 2 0 0 0 0 0 0 0 0
.....................................................................GTTCCTTCGTCTCCTAGTCGATAT.............................................................................................................................................................. 24 1 7 0.29 2 2 0 0 0 0 0 0 0 0
..................ACCATCGGGTGATGGGTTGCTCCCC................................................................................................................................................................................................................ 25 0 14 0.29 4 4 0 0 0 0 0 0 0 0
........................................CCCCCGGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 27 0 14 0.29 4 4 0 0 0 0 0 0 0 0
......................................................................TTCCTTCGTCTCCTAGACGAT................................................................................................................................................................ 21 0 7 0.29 2 2 0 0 0 0 0 0 0 0
.................AACCATCGGGTGATGGGTTGCTCC.................................................................................................................................................................................................................. 24 0 14 0.29 4 4 0 0 0 0 0 0 0 0
........................................CCCCCGGTCACACACTAGGAGGT............................................................................................................................................................................................ 23 1 18 0.28 5 4 0 1 0 0 0 0 0 0
.............................................CGTTACACACTAGGAGGTTT.......................................................................................................................................................................................... 20 1 18 0.28 5 4 0 0 0 1 0 0 0 0
.............GTGTAACCATCGGGTGATGGGTT....................................................................................................................................................................................................................... 23 0 11 0.27 3 3 0 0 0 0 0 0 0 0
...........................................CCGGTCACACACTAGGAGGTTTATTTGT.................................................................................................................................................................................... 28 1 15 0.27 4 2 0 1 0 0 1 0 0 0
...........................................ACCGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 24 2 16 0.25 4 4 0 0 0 0 0 0 0 0
................................GGTTGCTCCCCCCGGTTACACACT................................................................................................................................................................................................... 24 0 16 0.25 4 3 0 0 1 0 0 0 0 0
.............................................GGTCACACACTAGGAGGTTTATTTGT.................................................................................................................................................................................... 26 1 16 0.25 4 3 0 0 0 1 0 0 0 0
...................................TGCTCCCCCCGGTCACACACT................................................................................................................................................................................................... 21 1 17 0.24 4 4 0 0 0 0 0 0 0 0
..............................................GTTACACACTAGGAGGTTTA......................................................................................................................................................................................... 20 0 17 0.24 4 4 0 0 0 0 0 0 0 0
.....................................CTCCCCCCGGTCACACACTAGGAGGTT........................................................................................................................................................................................... 27 1 13 0.23 3 0 3 0 0 0 0 0 0 0
...............GTAACCATCGGGTGATGGGTTGCTCCC................................................................................................................................................................................................................. 27 0 13 0.23 3 3 0 0 0 0 0 0 0 0
...............GTAACCATCGGGTGATGGGTTGCTCCCC................................................................................................................................................................................................................ 28 0 13 0.23 3 3 0 0 0 0 0 0 0 0
....................................GCTCCCCCCGGTCACACACTAGGAG.............................................................................................................................................................................................. 25 1 13 0.23 3 3 0 0 0 0 0 0 0 0
............................GATGGGTTGCTCCCCCCGGTTACACACT................................................................................................................................................................................................... 28 0 13 0.23 3 3 0 0 0 0 0 0 0 0
............................GATGGGTTGCTCCCCCCGGTCACAC...................................................................................................................................................................................................... 25 1 13 0.23 3 0 2 1 0 0 0 0 0 0
............................................................................CGTCTCCTAGACGATATGGGT.......................................................................................................................................................... 21 1 9 0.22 2 0 2 0 0 0 0 0 0 0
...........................................CCCGTTACACACTAGGAGGT............................................................................................................................................................................................ 20 1 18 0.22 4 4 0 0 0 0 0 0 0 0
...........................................CCCGTTACACACTAGGAGGTT........................................................................................................................................................................................... 21 1 18 0.22 4 4 0 0 0 0 0 0 0 0
.............................................CGTTACACACTAGGAGGTTTA......................................................................................................................................................................................... 21 1 18 0.22 4 4 0 0 0 0 0 0 0 0
...........................................AACGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 25 3 18 0.22 4 4 0 0 0 0 0 0 0 0
.................AACCATCGGGTGATGGGTTGCTCCCC................................................................................................................................................................................................................ 26 0 14 0.21 3 3 0 0 0 0 0 0 0 0
.......................................CCCCCCGGTCACACACTAGGAGGTTTA......................................................................................................................................................................................... 27 1 14 0.21 3 3 0 0 0 0 0 0 0 0
.................AACCATCGGGTGATGGGTTGCTCCC................................................................................................................................................................................................................. 25 0 14 0.21 3 3 0 0 0 0 0 0 0 0
...............................................TCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 20 1 19 0.21 4 4 0 0 0 0 0 0 0 0
.........................GGTGATGGGTTGCTCCCCCCGGT........................................................................................................................................................................................................... 23 0 19 0.21 4 4 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCAGCTTTTTTAGATAACTTTTGCT..... 25 0 5 0.20 1 1 0 0 0 0 0 0 0 0
..........................................CCCGGTTACACACTAGGAGGTT........................................................................................................................................................................................... 22 0 15 0.20 3 2 0 1 0 0 0 0 0 0
.........................................CCCCCGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 27 1 15 0.20 3 2 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................TCAGCTTTTTTAGATAACTTTTGCTT.... 26 0 5 0.20 1 1 0 0 0 0 0 0 0 0
.............GTGTAACCATCGGGTGATGGGTTGCTC................................................................................................................................................................................................................... 27 0 10 0.20 2 0 2 0 0 0 0 0 0 0
........................................CCCCCCGTTACACACTAGGAGGTTTATT....................................................................................................................................................................................... 28 1 15 0.20 3 3 0 0 0 0 0 0 0 0
..........................................CCCGGTCACACACTAGGAGTTTTATT....................................................................................................................................................................................... 26 2 16 0.19 3 3 0 0 0 0 0 0 0 0
..........................................CCCGGTCACACACTAGGAGGTTTAGT....................................................................................................................................................................................... 26 2 16 0.19 3 0 0 3 0 0 0 0 0 0
..........................................CCCCGTTACACACTAGGAGGTTT.......................................................................................................................................................................................... 23 1 16 0.19 3 2 0 1 0 0 0 0 0 0
.................................GTTGCTCCCCCCGGTCACACACT................................................................................................................................................................................................... 23 1 16 0.19 3 3 0 0 0 0 0 0 0 0
........................................CCCCCCGTTACACACTAGGAGGTTTA......................................................................................................................................................................................... 26 1 16 0.19 3 1 2 0 0 0 0 0 0 0
.............GTGTAACCATCGGGTGATGGGT........................................................................................................................................................................................................................ 22 0 11 0.18 2 1 0 0 0 1 0 0 0 0
...................................TGCTCCCCCCGGTCACACACTAGGAG.............................................................................................................................................................................................. 26 1 11 0.18 2 2 0 0 0 0 0 0 0 0
................................................TACACACTAGGAGGTTTAT........................................................................................................................................................................................ 19 0 17 0.18 3 3 0 0 0 0 0 0 0 0
...........................................CCGGTCACACACTAGGAGTTTTAT........................................................................................................................................................................................ 24 2 17 0.18 3 2 0 1 0 0 0 0 0 0
................................................TACACACTAGGAGGTTTATT....................................................................................................................................................................................... 20 0 17 0.18 3 2 0 0 0 1 0 0 0 0
............................................CCGTTACACACTAGGAGGTTTA......................................................................................................................................................................................... 22 1 17 0.18 3 3 0 0 0 0 0 0 0 0
...........................................CCCGTTACACACTAGGAGGTTT.......................................................................................................................................................................................... 22 1 17 0.18 3 3 0 0 0 0 0 0 0 0
.........................................CCCCGGTCACACACTAGGAGGTT........................................................................................................................................................................................... 23 1 17 0.18 3 3 0 0 0 0 0 0 0 0
...........................................CCCGTTACACACTAGGAGGTTTAGT....................................................................................................................................................................................... 25 2 17 0.18 3 0 0 3 0 0 0 0 0 0
..........................................................................TTCGTCTCCTAGACGATATGGGG.......................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................................................TCGTCTCCTGGACGATATGGGG.......................................................................................................................................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.......................................CCCCCCGGTTACACACTAGGATGTTTAT........................................................................................................................................................................................ 28 1 12 0.17 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CCCTACCAGCTTTTTTAGATAACTTT......... 26 3 6 0.17 1 1 0 0 0 0 0 0 0 0
.....................................................................GTTCCTTCGTCTCCTAGACGATATCCGA.......................................................................................................................................................... 28 3 6 0.17 1 1 0 0 0 0 0 0 0 0
.......................................................................TCCTTCGTCTCCTAGACGATATGGGGTT........................................................................................................................................................ 28 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCTACCAGCTTTTTTAGATAAC............ 22 3 6 0.17 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TATGTAACCTCTCTCAGCTTTT..................... 22 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................CCTACCAGCTTTTTTAGATAACTTT......... 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AACTTATGTAACCTCTCTCAGCTTTT..................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTACCAGCTTTTTTAGATAACTTT......... 24 2 6 0.17 1 1 0 0 0 0 0 0 0 0
...........................................................................TCGTCTCCTAGACGATATGGGGTTG....................................................................................................................................................... 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AACCTCTCTCAGCTTTTTTAGATAACT........... 27 0 6 0.17 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CCCTACCAGCTTTTTTAGATAACTT.......... 25 3 6 0.17 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................ACTTGTGTAACCTCTCTCAGCTTTT..................... 25 1 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................................................TTCGTCTCCTAGACGATATGGGGT......................................................................................................................................................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................CCTCTCTCAGCTTTTTTAGATAACT........... 25 0 6 0.17 1 0 0 0 0 0 0 1 0 0
........AAAAAGTGTAACCATCGAGTGATGGGT........................................................................................................................................................................................................................ 27 3 6 0.17 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................CCCTACCAGCTTTTTTAGATAAC............ 23 3 6 0.17 1 0 0 1 0 0 0 0 0 0
.............................................CGTTACACACTAGGAGGTT........................................................................................................................................................................................... 19 1 19 0.16 3 2 0 0 0 1 0 0 0 0
............................................CGGTCACACACTAGGAGGT............................................................................................................................................................................................ 19 1 19 0.16 3 3 0 0 0 0 0 0 0 0
...........................................CCGGTCACACACTAGGAGGT............................................................................................................................................................................................ 20 1 19 0.16 3 2 0 1 0 0 0 0 0 0
.................................................ACACACTAGGAGGTTTATT....................................................................................................................................................................................... 19 0 19 0.16 3 3 0 0 0 0 0 0 0 0
.......................................CCCCCCGGTTACACATTAGGAGGTTTAT........................................................................................................................................................................................ 28 1 13 0.15 2 2 0 0 0 0 0 0 0 0
....................................GCTCCCCCCGGTCACACACTAGGAGGTT........................................................................................................................................................................................... 28 1 13 0.15 2 2 0 0 0 0 0 0 0 0
............................GATGGGTTGCTCCCCCCGGTCACACA..................................................................................................................................................................................................... 26 1 13 0.15 2 2 0 0 0 0 0 0 0 0
...............GTAACCATCGGGTGATGGGTTGCTCC.................................................................................................................................................................................................................. 26 0 13 0.15 2 2 0 0 0 0 0 0 0 0
.............................ATGGGTTGCTCCCCCCGGTCACACAC.................................................................................................................................................................................................... 26 1 13 0.15 2 2 0 0 0 0 0 0 0 0
...................................TGCTCCCCCCGGTTACACACTAGGAT.............................................................................................................................................................................................. 26 1 13 0.15 2 2 0 0 0 0 0 0 0 0
................................................CACACACTAGGAGGTTTATTTGTTCCT................................................................................................................................................................................ 27 1 13 0.15 2 1 0 0 0 1 0 0 0 0
.............................................GGTCACACACTAGGAGGT............................................................................................................................................................................................ 18 1 20 0.15 3 3 0 0 0 0 0 0 0 0
..................ACCATTGGGTGATGTGATG...................................................................................................................................................................................................................... 19 3 20 0.15 3 2 0 0 0 0 1 0 0 0
.........................GGTGATGGGTTGCTCCCCC............................................................................................................................................................................................................... 19 0 20 0.15 3 3 0 0 0 0 0 0 0 0
......................................................................TTCCTACGTCTCCTAGACGATAT.............................................................................................................................................................. 23 1 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................TGTTCCTTCGTCTCCTAGACGAT................................................................................................................................................................ 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...............................................................................CTCCTAGACGATATGGGGTTCA...................................................................................................................................................... 22 0 7 0.14 1 1 0 0 0 0 0 0 0 0
................................................................TCGTTATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 29 3 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................TTGTTCCTTCGTCTCCTAGACGATA............................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................TGTTCCTTCATCTCCTAGACGATA............................................................................................................................................................... 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................TTATTCCTTCGTCTCCTAGACGAT................................................................................................................................................................ 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................................................GTCTCCTAGACGATATGGGGTTCAA..................................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................TTGTTCCTTCGTCTCCTGGACGATAT.............................................................................................................................................................. 26 1 7 0.14 1 0 1 0 0 0 0 0 0 0
.................................................................................CCTAGACGATATGGGGTTCAA..................................................................................................................................................... 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................TGTTCGTTCGTCTCCTAGACGATGT.............................................................................................................................................................. 25 2 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................AAGTTCCTTCTTCTCCTAGACGATAT.............................................................................................................................................................. 26 3 7 0.14 1 1 0 0 0 0 0 0 0 0
.......................................CCCCCCCGTTACACACTAGGAGGT............................................................................................................................................................................................ 24 1 14 0.14 2 2 0 0 0 0 0 0 0 0
...............GTAACCATCGGGTGATGGGT........................................................................................................................................................................................................................ 20 0 14 0.14 2 2 0 0 0 0 0 0 0 0
.....................................................................GTTCCTTCGTCTCCTAGACGATATC............................................................................................................................................................. 25 1 7 0.14 1 0 0 1 0 0 0 0 0 0
.........................................CCCCGGTTACACACTAGGAGGTTTA......................................................................................................................................................................................... 25 0 14 0.14 2 2 0 0 0 0 0 0 0 0
..................................................................GAAGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 27 3 7 0.14 1 1 0 0 0 0 0 0 0 0
.........................................................................CTTCATCTCCTAGACGATAT.............................................................................................................................................................. 20 1 7 0.14 1 0 1 0 0 0 0 0 0 0
...................................................................TTGTTCCTTCATCTCCTAGACGATAA.............................................................................................................................................................. 26 2 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................TTATTCCTTCGTCTCCTAGACGATT............................................................................................................................................................... 25 2 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................TTGTTCCTACGTCTCCTAGACGATAT.............................................................................................................................................................. 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................TTGTTCGTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
......................................................................TTCCTTCGTCTCCTAGACGATATC............................................................................................................................................................. 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................TGTTCCTTCATCTCCTAGACGATATT............................................................................................................................................................. 26 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................................GTTTCTTCGTCTCCTAGGCGATA............................................................................................................................................................... 23 2 7 0.14 1 1 0 0 0 0 0 0 0 0
........................................................................CCTTCGTCTACTAGACGATAT.............................................................................................................................................................. 21 1 7 0.14 1 0 0 1 0 0 0 0 0 0
.....................................................................GTTCCTTCGTCTCCTAGACGATCGC............................................................................................................................................................. 25 3 7 0.14 1 0 0 1 0 0 0 0 0 0
....................................................................TGTTCATTCGTCTCCTAGACGATAT.............................................................................................................................................................. 25 1 7 0.14 1 0 1 0 0 0 0 0 0 0
...................................................................AGATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 26 3 7 0.14 1 1 0 0 0 0 0 0 0 0
.........................................CCCCGGTTACACACTAGGAGGTTTAT........................................................................................................................................................................................ 26 0 14 0.14 2 2 0 0 0 0 0 0 0 0
...................................................................CTATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 26 2 7 0.14 1 0 0 1 0 0 0 0 0 0
.....................................................................GTTCCTTCGTCTCATAGACGATAT.............................................................................................................................................................. 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...............GTAACCATCGGGTGATGGGTT....................................................................................................................................................................................................................... 21 0 14 0.14 2 2 0 0 0 0 0 0 0 0
.........................................................................CTTCTTCTCCTAGACGATAT.............................................................................................................................................................. 20 1 7 0.14 1 0 1 0 0 0 0 0 0 0
......................................................................TTCCTTCGTCTCCCAGACGATAT.............................................................................................................................................................. 23 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................................GTTCATTCGTCTCCTAGACGATAT.............................................................................................................................................................. 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.........................................CCCCGGTTACACACTAGGATGTTTATT....................................................................................................................................................................................... 27 1 14 0.14 2 0 0 0 2 0 0 0 0 0
....................................................................AATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 25 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................GGTTACACACTAGGAGGTTTATTTGT.................................................................................................................................................................................... 26 0 14 0.14 2 2 0 0 0 0 0 0 0 0
.................................................................AAATATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 28 3 7 0.14 1 1 0 0 0 0 0 0 0 0
......................................................................TTCCTTCGTCTTCTAGACGATAT.............................................................................................................................................................. 23 1 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................TGTTCCTACGTCTCCTAGACGATAT.............................................................................................................................................................. 25 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................CTGTTCCTTCCTCTCCTAGACGATAT.............................................................................................................................................................. 26 2 7 0.14 1 0 0 0 0 0 1 0 0 0
....................................................................GATTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 25 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.................AACCATCGGGTGATGGGTTGCTCCCCC............................................................................................................................................................................................................... 27 0 14 0.14 2 2 0 0 0 0 0 0 0 0
...................................................................TTATTCCTTCGTCTCCTAGACGATATTGA........................................................................................................................................................... 29 3 7 0.14 1 1 0 0 0 0 0 0 0 0
............................................................................CGTCTCCTAGACGATGTGGGGTTCA...................................................................................................................................................... 25 1 7 0.14 1 0 1 0 0 0 0 0 0 0
........................................................................CCTTCATCTCCTAGACGATAT.............................................................................................................................................................. 21 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................ATGTTCCTACGTCTCCTAGACGATAT.............................................................................................................................................................. 26 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................................GTTCCTTCATCTCCTAGACGATA............................................................................................................................................................... 23 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.............................................................................GTCTCCTAGACGATATGGGGTTC....................................................................................................................................................... 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................ATACCAGCTTTTTTAGATAACT........... 22 3 7 0.14 1 0 0 1 0 0 0 0 0 0
.....................................................................GTTCCTTCGTCTTCTAGACGATAT.............................................................................................................................................................. 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................TATTGCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 25 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.......................................................................CCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 22 1 7 0.14 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................TACCAGCTTTTTTAGATAACTC.......... 22 3 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................TTGTTCCTTCGCCTCCTAGACGATAT.............................................................................................................................................................. 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
..............................................................................TCTCCTAGACGATATGGGGTTCA...................................................................................................................................................... 23 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................TTATTCCTTCGTCTCCTAGACCATAT.............................................................................................................................................................. 26 2 7 0.14 1 1 0 0 0 0 0 0 0 0
.......................................................................TCCTTCGTCTCCTATACGATAT.............................................................................................................................................................. 22 1 7 0.14 1 1 0 0 0 0 0 0 0 0
................................................................AAAATGTTCCTTCGTCTCCTAGACGATAT.............................................................................................................................................................. 29 3 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................TGTTCCTTCATCTCCTAGACGAT................................................................................................................................................................ 23 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...................................................................TTGTTCCTTCATATCCTAGACGATAT.............................................................................................................................................................. 26 2 7 0.14 1 0 1 0 0 0 0 0 0 0
...................................................................TTGTTCCTTCGTCTTCTAGACGATAT.............................................................................................................................................................. 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................TGTTCCTTCGTCTCCTGGACGATAT.............................................................................................................................................................. 25 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.......................................................................TCCTTCCTCTCCTAGACGATA............................................................................................................................................................... 21 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...............................................................................CTCCTAGACGATATGGGGTT........................................................................................................................................................ 20 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................................ATTCCTTCGTCTCCTAGACGATA............................................................................................................................................................... 23 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................................GTTCCTTCGTCTCCTAGACGAT................................................................................................................................................................ 22 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..........................................CCCGGTTACACATTAGGAGGTTTAT........................................................................................................................................................................................ 25 1 15 0.13 2 2 0 0 0 0 0 0 0 0
........................................CCCCCCGTTACACACTAGGAGGTTT.......................................................................................................................................................................................... 25 1 16 0.13 2 2 0 0 0 0 0 0 0 0
................................................CACACACTAGGAGGTTTATTTGT.................................................................................................................................................................................... 23 1 16 0.13 2 2 0 0 0 0 0 0 0 0
.........................................CCCCGGTCACACACTAGGAGGTTTA......................................................................................................................................................................................... 25 1 16 0.13 2 2 0 0 0 0 0 0 0 0
..........................................CCCGGTCACACACTAGGAGGTTTGT........................................................................................................................................................................................ 25 2 16 0.13 2 0 0 2 0 0 0 0 0 0
...........................................CCCGTTACACACTAGGAGGTTTATTT...................................................................................................................................................................................... 26 1 16 0.13 2 1 0 1 0 0 0 0 0 0
..........................................CTCGGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 25 2 16 0.13 2 0 2 0 0 0 0 0 0 0
.........................................ACCCGGTCACACACTAGGAGGTTTAT........................................................................................................................................................................................ 26 2 16 0.13 2 2 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_99:20319-20569 - dps_2288 TTGGAGGATCCTTCACATTGGTAGCCCACTACCCAACGAGGGGGGCCAATGTGTG---ATCCTCCAAATAAACAAGGAAGCAGAGGATCTGCTATACCCCAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAATACATTGGAGAGAGTCGAAAAAATCTATTGAAAACGAACGCA
droPer2 scaffold_89:55139-55240 + TTGGAGGATCCTACACATTGGTAGCCCACTACCCAACGAGGGGGGCCAATGTGTG---ATCCTCCAAATAAACAAGGAAGCAGAGGATCTGCTATACCCCAAGTT-----------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004852:167636-167734 - CTGGAGGGTGCTACATATCGTCACCACGTTGCATGAGAGAGGAGAGTAGCCTCTGTACATCCTGCAGATCAATAAGGAGGCAGAGGACATGCTATATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:5335492-5335572 + CTGGCAAGTTGTTACTGT---------CAAGCCTGATAGCAAGGGCCAAAAGATG---GTGCTGAAGATCACCAAGGAGTCCAATGAGCTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000301657:35708-35808 + CTGGAAGGTTCTGCACGTTGCTGCCCCATCACCCAAGGAGGGGGGGCAAAGTGCA---GTCCTCCAAATAAACAAGGAGGCAGAGGACATCCTTTATCCCAGAT------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453355:1780-1828 - TTTGAATTGTTAGAATAAG---------------------T----------------------------------------------TTCGTTGAAATTGAGTTT------------------------------------------------------------------------------------------------------------------------------------------GATCGAGCGCA
droEle1 scf7180000488370:31423-31522 - TTGGAAAATACTGCACAACGCGAGCCCACGACCCAACGAGGATGGCCAGAGTGTA---GTTCTCCAAATAAA-AATGAGACAGAGGACCTTCCTTACCCCAGGT------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000300282:76827-76917 + TTGAAAGATTCTGCACATGGCCGGCCCACTACCAAACGAGGGGCGCCAAAGTGTG---GTTCTACAAAAAAACAAGAATGCAGAGGATCTGCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415759:17111-17212 + TTGGAAGATTCTGCACATGGTCAGCCCTCTACCCAACGAGGGGGGCCAAAGTGTG---GTTCTCCAAATCAACAAGGAGGCGGAGGATCTGCTGTACCCAAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chr2L_random_028:160834-160934 - CTGGAAGGTTCTGCACCTTGCGACCCCATTACCCAAGGAGGGGGGCCATAGTGCA---GTCCTCCAGATAAAAAAGGAGGCGGAGGACATCCTCTATCCGAGGT------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
TTGGAGGATCCTTCACATTGGTAGCCCACTACCCAACGAGGGGGGCCAATGTGTG---ATCCTCCAAATAAACAAGGAAGCAGAGGATCTGCTATACCCCAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGAATACATTGGAGAGAGTCGAAAAAATCTATTGAAAACGAACGCASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.............................................................CTCCAAATAAACAAGGAAGCAG...........................................................................................................................................................................2262.17130800000500
.............................................................CTCCAAATAAACAAGGAAGCAGAGG........................................................................................................................................................................2562.17130800000320
.............................................................CTCCAAATAAACAAGGAAGCAGAG.........................................................................................................................................................................2461.0060300000210
.............................................................CTCCAAATAAACAAGGAAGCAGAGA........................................................................................................................................................................2560.6740100000300
............................................................CCTCCAAATAAACAAGGAAGCAGAGG........................................................................................................................................................................2660.6740100000300
..............................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTCG.........................2360.6740400000000
...............................................................................................................................................................................................................................GAGTCGAAAAAATCTATTGAAAACG......2550.6030200001000
.............CACATTGGTAGCCCACTACCCA...........................................................................................................................................................................................................................22110.5560600000000
.............CACATTGGTAGCCCACTACCCAA..........................................................................................................................................................................................................................23110.5560600000000
............................................................CCTCCAAATAAACAAGGAAGCAGA..........................................................................................................................................................................2460.5030210000000
..................TGGTAGCCCACTACCCAACGAGGGG...................................................................................................................................................................................................................25140.5070700000000
.............................................................CTCCAAATAAACAAGGAAGCA............................................................................................................................................................................2160.5030300000000
.............CACATTGGTAGCCCACTACCC............................................................................................................................................................................................................................21110.3640400000000
.............................................................CTCCAAATAAACAAGGAAGCAGAGGATC.....................................................................................................................................................................2860.3320000000200
............................................................CCTCCAAATAAACAAGGAAGCAG...........................................................................................................................................................................2360.3320200000000
.................................................................AAATAAACAAGGAAGCAGAGG........................................................................................................................................................................2190.3330100000200
............................................................CCTCCAAATAAACAAGGAAGC.............................................................................................................................................................................2160.3320100000100
.............................................................CTCCAAATAAACAAGGAAGCAGA..........................................................................................................................................................................2360.3320200000000
.............CACATTGGTAGCCCACTACCCAACG........................................................................................................................................................................................................................25100.3030200000100
................................................................CAAATAAACAAGGAAGCAGAG.........................................................................................................................................................................2190.2220000000200
................................................................................................................................................................................................................................AGTCGAAAAAATCTATTGAAAACG......2450.2010100000000
..........................................................ATCCTCCAAATAAACAAGGAAGCAG...........................................................................................................................................................................2550.2010100000000
...........................................................TCCTCCAAATAAACAAGGAAGCA............................................................................................................................................................................2350.2010100000000
..............................................CAATGTGTG---ATCCTCCAAATAAAA.....................................................................................................................................................................................24170.1830000000300
..............................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTCGA........................2460.1710100000000
..............................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTT..........................2260.1710100000000
..............................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTCGAAA......................2660.1710100000000
..............................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTC..........................2260.1710000000100
..............................................................................................................................................................................................................TTTGAATACATTGGAGAGAGTCGAA.......................2560.1710100000000
............................................................CCTCCAAATAAACAAGGAAGCAGAGGA.......................................................................................................................................................................2760.1710000000010
.............................................................CTCCAAATAAACAAGGAAGCAGAGGA.......................................................................................................................................................................2660.1710100000000
.............................................................CTCCAAATAAACAAGGAAGCAGAGGAT......................................................................................................................................................................2760.1710100000000
.....................TAGCCCACTACCCAACGAGGGGGG.................................................................................................................................................................................................................24200.1530200000010
.............................................................CTCCAAATAAACAAGGAAGCAGAA.........................................................................................................................................................................2470.1410100000000
............................................................CCTCCAAATAAACAAGGAAGCAGAA.........................................................................................................................................................................2570.1410100000000
.................TTGGTAGCCCACTACCCAACGAGGGGG..................................................................................................................................................................................................................27140.1420110000000
..............ACATTGGTAGCCCACTACCC............................................................................................................................................................................................................................20140.1420200000000
..................TGGTAGCCCACTACCCAACGAGGG....................................................................................................................................................................................................................24140.1420200000000
..................TGGTAGCCCACTACCCAACGAGG.....................................................................................................................................................................................................................23140.1420100100000
..............................................................TCCAAATAAACAAGGAAGCAGA..........................................................................................................................................................................2290.1110100000000
..............................................................TCCAAATAAACAAGGAAGCAGAG.........................................................................................................................................................................2390.1110100000000
.......................................................................ACAAGGAAGCAGAGGATCTG...................................................................................................................................................................2090.1110000000010
.........................CCACTACCCAACGAGGGGGGCC...............................................................................................................................................................................................................22190.1120200000000
...................................................................ATAAACAAGGAAGCAGAGG........................................................................................................................................................................19100.1010000000010
.............CACATTGGTAGCCCACTACCCAACGAGG.....................................................................................................................................................................................................................28100.1010100000000
.............CACATTGGTAGCCCACTACCCAACGA.......................................................................................................................................................................................................................26100.1010100000000
.....................................................................AAACAAGGAAGCAGAGGATCT....................................................................................................................................................................21100.1010000001000
.....................TAGCCCACTACCCAACGAGGGG...................................................................................................................................................................................................................22200.1020200000000
....................................................................TAAACAAGGAAGCAGAGG........................................................................................................................................................................18100.1010100000000
..................TGGTAGCCCACTACCCAACGAGGGGGG.................................................................................................................................................................................................................27110.0910100000000
.................TTGGTAGCCCACTACCCAACGAGGGGGGC................................................................................................................................................................................................................29110.0910100000000
..................TGGTAGCCCACTACCCAACGAGGGGGGC................................................................................................................................................................................................................28110.0910100000000
.................TTGGTAGCCCACTACCCAACGAGGGGGG.................................................................................................................................................................................................................28110.0910100000000
.............CACATTGGTAGCCCACTAA..............................................................................................................................................................................................................................19120.0810100000000
.............CACATTGGTAGCCCACTAC..............................................................................................................................................................................................................................19120.0810000100000
.............CACATTGGTAGCCCACTACC.............................................................................................................................................................................................................................20120.0810100000000
..............ACATTGGTAGCCCACTACCCAACG........................................................................................................................................................................................................................24130.0810100000000
.................................................TGTGTG---ATCCTCCAAATAAACAAGGA................................................................................................................................................................................26130.0810000000100
.................TTGGTAGCCCACTACCCAACGAGGGGGC.................................................................................................................................................................................................................28140.0710100000000
..................TGGTAGCCCACTACCCAACGAGGGGG..................................................................................................................................................................................................................26140.0710100000000
.................TTGGTAGCCCACTACCCAACGAGGAA...................................................................................................................................................................................................................26140.0710100000000
.................TTGGTAGCCCACTACCCAACGAGG.....................................................................................................................................................................................................................24140.0710100000000
...............CATTGGTAGCCCACTACCC............................................................................................................................................................................................................................19140.0710100000000
...................GGTAGCCCACTACCCAACGAGGGGGG.................................................................................................................................................................................................................26170.0610100000000
..............................................CAATGTGTG---ATCCTCCAAATAAA......................................................................................................................................................................................23170.0610100000000
..............................................CAATGTGTG---ATCCTCCAAACT........................................................................................................................................................................................21170.0610100000000
.....................TAGCCCACTACCCAACGAGGGGGGCC...............................................................................................................................................................................................................26190.0510100000000
.........................CCACTACCCAACGAGGGGGGC................................................................................................................................................................................................................21190.0510100000000
.........................CCACTACCCAACGAGGGGGGT................................................................................................................................................................................................................21200.0510000100000
.........................CCACTACCCAACGAGGGGGG.................................................................................................................................................................................................................20200.0510100000000
.....................TAGCCCACTACCCAACGAGGGGGGT................................................................................................................................................................................................................25200.0510100000000
...........................ACTACCCAACGAGGGGGGCCA..............................................................................................................................................................................................................21200.0510100000000
.......................................GGGGGGCCAATGTGTG---AT..................................................................................................................................................................................................18200.0510100000000
droPer2
TTGGAGGATCCTACACATTGGTAGCCCACTACCCAACGAGGGGGGCCAATGTGTG---ATCCTCCAAATAAACAAGGAAGCAGAGGATCTGCTATACCCCAAGTT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
.............................................................CTCCAAATAAACAAGGAAGCAGAG.........................................................................................................................................................................24200.5010090001
.............................................................CTCCAAATAAACAAGGAAGCAG...........................................................................................................................................................................22200.255050000
.............CACATTGGTAGCCCACTACCCAAC.........................................................................................................................................................................................................................24200.153030000
.............CACATTGGTAGCCCACTACCCAACGAG......................................................................................................................................................................................................................27200.102020000
........TCCTACACATTGGTAGCCCACTACC.............................................................................................................................................................................................................................25200.051010000
.................TTGGTAGCCCACTACCCAACGAGGGGG..................................................................................................................................................................................................................27200.051010000
........................................GGGGGCCAATGTGTG---ATC.................................................................................................................................................................................................18200.051010000
.............CACATTGGTAGCCCACTACCCAACGA.......................................................................................................................................................................................................................26200.051010000
..................TGGTAGCCCACTACCCAACGAGG.....................................................................................................................................................................................................................23200.051010000
.................................................................AAATAAACAAGGAAGCAGAGGAT......................................................................................................................................................................23200.051010000
.............................TACCCAACGAGGGGGGCCA..............................................................................................................................................................................................................19200.051010000
...............................................................CCAAATAAACAAGGAAGCAGA..........................................................................................................................................................................21200.051010000
.............................................................CTCCAAATAAACAAGGAAGCAGAGGAT......................................................................................................................................................................27200.051010000
........TCCTACACATTGGTAGCCCACTACCCAA..........................................................................................................................................................................................................................28200.051010000
droWil2
CTGGAGGGTGCTACATATCGTCACCACGTTGCATGAGAGAGGAGAGTAGCCTCTGTACATCCTGCAGATCAATAAGGAGGCAGAGGACATGCTATATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
No Reads
droVir3
CTGGCAAGTTGTTACTGT---------CAAGCCTGATAGCAAGGGCCAAAAGATG---GTGCTGAAGATCACCAAGGAGTCCAATGAGCTGCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
.............................AGCCTGATAGCAAGGGCCAAAAG..........................................................................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
............TACTGT---------CAAGCCTGATAGCAAGGGCCAA.............................................................................................................................................................................................................2811.001000000000000000000000000000000010000000000000000000000000000000
....................................TAGCAAGGGCCAAAAGATG---GTGCT...............................................................................................................................................................................................2411.001000000000000000000000000000000000000000100000000000000000000000
droKik1
CTGGAAGGTTCTGCACGTTGCTGCCCCATCACCCAAGGAGGGGGGGCAAAGTGCA---GTCCTCCAAATAAACAAGGAGGCAGAGGACATCCTTTATCCCAGAT------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TTTGAATTGTTAGAATAAG---------------------T----------------------------------------------TTCGTTGAAATTGAGTTT------------------------------------------------------------------------------------------------------------------------------------------GATCGAGCGCASizeHit CountTotal NormTotal
No Reads
droEle1
TTGGAAAATACTGCACAACGCGAGCCCACGACCCAACGAGGATGGCCAGAGTGTA---GTTCTCCAAATAAA-AATGAGACAGAGGACCTTCCTTACCCCAGGT------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTGAAAGATTCTGCACATGGCCGGCCCACTACCAAACGAGGGGCGCCAAAGTGTG---GTTCTACAAAAAAACAAGAATGCAGAGGATCTGCTA----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTGGAAGATTCTGCACATGGTCAGCCCTCTACCCAACGAGGGGGGCCAAAGTGTG---GTTCTCCAAATCAACAAGGAGGCGGAGGATCTGCTGTACCCAAGATT-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
CTGGAAGGTTCTGCACCTTGCGACCCCATTACCCAAGGAGGGGGGCCATAGTGCA---GTCCTCCAGATAAAAAAGGAGGCGGAGGACATCCTCTATCCGAGGT------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
....................................................................TAAAAAAGGAGGCGGAGGACATCC..................................................................................................................................................................2411.00101000000000
.........TCTGCACCTTGCGACCCCATTACCCAAG.........................................................................................................................................................................................................................2811.00101000000000
..............................................................TCCAGATAAAAAAGGAGGCGGAGGA.......................................................................................................................................................................2511.00101000000000
.........TCTGCACCTTGCGACCCCATTACCC............................................................................................................................................................................................................................2511.00101000000000
..............................................................TCCAGATAAAAAAGGAGGCGG...........................................................................................................................................................................2111.00101000000000
.TGGAAGGTTCTGCACCTTGCGACCCCA..................................................................................................................................................................................................................................2750.20101000000000

Generated: 05/18/2015 at 03:56 AM