ID:

dps_227

 Coordinate:

Unknown_group_148:4870-4939 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.9 -28.7 -28.7

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
DMCR1ALINECR1+
mature
  1. Unknown_group_40:30358-30382 +
  2. dps_227  Unknown_group_148:4915-4939 -
  3. Unknown_group_135:8041-8065 +
star
  1. Unknown_group_58:41499-41518 -
  2. Unknown_group_40:30406-30425 +
  3. dps_227  Unknown_group_148:4871-4890 -
  4. Unknown_group_274:2584-2603 -
  5. Unknown_group_51:18273-18292 +

Sense Strand Reads

AGCAGGACGATTTGTAAGTGTTATGGGGGGCCTAATTTTCTTTTTAGCCTTGAACTCCTTCACCACCAAATGCTCTGGCCAAAAATTTGGCAGAGAAAATGGTGTCAAAGTGAGTTGGGGAGACACTTATCTTGAACGAAGATATCTCCCTGGCATAAGAAAAATTAAAC
***********************************............((((.((((((((...(((((....(((((.((((....)))))))))....)))))...))).)))))))))..............************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 SRR902011
testis
 V112
male body		 M062
head
 SRR902010
ovaries
 GSM343916
embryo
..................................................TGAACTCCTTCACCACCAAATGCTC............................................................................................... 25 0 3 10.67 32 19 12 0 0 0 1 0
..................................................TGAACTCCTTCACCACCAAATGCT................................................................................................ 24 0 3 1.33 4 1 2 1 0 0 0 0
.................................................................................................................................TCTTGAACGAAGATATCTCCC.................... 21 0 3 1.00 3 3 0 0 0 0 0 0
..................................................TGAACTCCTTCACCACCAAATGCTCCGG............................................................................................ 28 1 20 0.75 15 0 15 0 0 0 0 0
.....................................................................................................................................GAACGAAGATATCTCCCTGGC................ 21 0 3 0.67 2 2 0 0 0 0 0 0
.....................................................................................................................................GAACGAAGATATCTCCCTGGCA............... 22 0 3 0.67 2 2 0 0 0 0 0 0
..................................................TGAACTCCTTCACCACCAAATGC................................................................................................. 23 0 3 0.67 2 1 1 0 0 0 0 0
.................................................................................................................................TCTTGAACGAAGATATCTCCCTGG................. 24 0 3 0.67 2 2 0 0 0 0 0 0
................................................................................................................AGTTGGGGAGACACTTATCTT..................................... 21 0 3 0.67 2 2 0 0 0 0 0 0
...................................................................................................TGGTGTCAAAGTGAGTTGGG................................................... 20 0 5 0.40 2 0 0 2 0 0 0 0
.................................................................................................................................TCTTGAACGAAGATATCTCCCTGGC................ 25 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................................GAACGAAGATATCTCCCTGGT................ 21 1 3 0.33 1 0 0 0 0 1 0 0
.................................................................................................................................TCTTGAACGAAGATATCTCCCTGGCA............... 26 0 3 0.33 1 1 0 0 0 0 0 0
..................................................TGAACTCCTTCACCACCAAATGTTC............................................................................................... 25 1 6 0.33 2 2 0 0 0 0 0 0
..................................................................................................................................CTTGAACGAAGATATCTCCCTGG................. 23 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................GTTGGGGAGACACTTATCTTG.................................... 21 0 3 0.33 1 0 0 0 1 0 0 0
...................................................................................................................................TTGAACGAAGATATCTCCCTGGCATA............. 26 0 3 0.33 1 0 0 1 0 0 0 0
...................................................................................................................................TTGAACGAAGATATCTCCCTGGA................ 23 1 3 0.33 1 0 0 1 0 0 0 0
....................................................................................................................................TGAACGAAGATATCTCCCTGGCATA............. 25 0 3 0.33 1 0 0 1 0 0 0 0
...............................................CCTTGAACTCCTTCACCACCAAATGCTC............................................................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................................TCTTGAACGAAGATATCTCCCTGGA................ 25 1 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................TGGGGAGACACTTATCTTGAACGAAGA............................ 27 0 3 0.33 1 0 0 1 0 0 0 0
..................................................TGAACTCCTTCACCACCAAATGCTCA.............................................................................................. 26 1 3 0.33 1 1 0 0 0 0 0 0
...................................................GAACTCCTTCACCACCAAATGCTC............................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................................AAAGTGAGTTGGGGAGACACTT.......................................... 22 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................TTGGGGAGACACTTATCTTGAACGAAGTT........................... 29 1 3 0.33 1 0 0 0 1 0 0 0
.......................................................................................................................................ACGAAGATATCTCCCTGGTA............... 20 1 4 0.25 1 1 0 0 0 0 0 0
..................................................TGAACTCCTTCACCACCAAATGCC................................................................................................ 24 1 4 0.25 1 0 1 0 0 0 0 0
...............................................CCTTGAACTCCTTCACCACCAAATG.................................................................................................. 25 0 5 0.20 1 1 0 0 0 0 0 0
..................................................TGAACTCCTTCACCACCAAATG.................................................................................................. 22 0 5 0.20 1 0 1 0 0 0 0 0
...............................................CCTTGAACTCCTTCACCACC....................................................................................................... 20 0 6 0.17 1 1 0 0 0 0 0 0
......................................................................................................TGTCAAAGTGAGTTGGGGAGA............................................... 21 0 6 0.17 1 1 0 0 0 0 0 0
..........................................ATTAGCCTTGAACTCCTTCAG........................................................................................................... 21 2 6 0.17 1 1 0 0 0 0 0 0
..................................................TGAACTCCTTCACCATCAAATGC................................................................................................. 23 1 7 0.14 1 0 1 0 0 0 0 0
...............GAGTGTTATTGTGGGCCTAA....................................................................................................................................... 20 3 15 0.13 2 0 0 1 0 0 0 1
...........................................................................................AGAGACAATGGGGTCAAAATGAG........................................................ 23 3 8 0.13 1 0 0 0 0 0 0 1
....................................................AACTCCTTCACCACAAAATGCTC............................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0 0
..................................................TGAACTCCTTCACCACCAAATGCTCCGAC........................................................................................... 29 2 20 0.05 1 0 1 0 0 0 0 0
..................................................TGAACTCCTTAACCACCAAATGCTCCGG............................................................................................ 28 2 20 0.05 1 0 1 0 0 0 0 0
..................................................TGAACTCCTTCACCACCAGATGCTCC.............................................................................................. 26 2 20 0.05 1 0 1 0 0 0 0 0

Anti-sense strand reads

TCGTCCTGCTAAACATTCACAATACCCCCCGGATTAAAAGAAAAATCGGAACTTGAGGAAGTGGTGGTTTACGAGACCGGTTTTTAAACCGTCTCTTTTACCACAGTTTCACTCAACCCCTCTGTGAATAGAACTTGCTTCTATAGAGGGACCGTATTCTTTTTAATTTG
************************************............((((.((((((((...(((((....(((((.((((....)))))))))....)))))...))).)))))))))..............*********************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M062
head
 M022
male body		 SRR902011
testis
 GSM343916
embryo
...................................AAAAGAAAAATCGGAACTTGAGGAA.............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................CCCTCTGTGAATAGAACTTGC................................ 21 0 3 0.67 2 2 0 0 0 0 0
................................................................CGGTTTACGAGACCGGTTTTT..................................................................................... 21 1 2 0.50 1 0 0 1 0 0 0
......................................................................................................................................TTGCTTCTATAGAGGGACCGT............... 21 0 4 0.50 2 2 0 0 0 0 0
.................................................................................................TTACCACAGTTTCACTCAACCCCTCT............................................... 26 0 5 0.40 2 2 0 0 0 0 0
..........................................................................................................................................TTCTATAGAGGGACCGTATT............ 20 0 3 0.33 1 0 1 0 0 0 0
.....................................................................................................................................CTTGCTTCTATAGAGGGACCA................ 21 1 3 0.33 1 0 1 0 0 0 0
.........................................................................................................................CTGTGAATAGAACTTGCTTCT............................ 21 0 3 0.33 1 0 0 0 1 0 0
.....................................................................................................................CCCTCTGTGAATAGAACTTG................................. 20 0 3 0.33 1 0 1 0 0 0 0
.................................................................................................................CAACACCTCTGTGAATAGAACTTGCT............................... 26 1 3 0.33 1 1 0 0 0 0 0
..................................................................................................................AACCCCTCTGTGAATAGAACTTGC................................ 24 0 3 0.33 1 1 0 0 0 0 0
....................................................................................................................CCCCTCTGTGGATAGAACTTG................................. 21 1 3 0.33 1 1 0 0 0 0 0
.........................................................................................CGTCTCTTTTACCACAGTTT............................................................. 20 0 3 0.33 1 1 0 0 0 0 0
................................................................................................................TCAACCCCTCTGTGAATAG....................................... 19 0 3 0.33 1 1 0 0 0 0 0
..............................................................................................................ACTCAACCCCTCTGTGAATAG....................................... 21 0 3 0.33 1 1 0 0 0 0 0
................................................................................................................TCAACCCCTCTGTGAATAGGAC.................................... 22 1 3 0.33 1 0 1 0 0 0 0
......................................................................................................................CCTCTGTGAATAGGACTTGC................................ 20 1 3 0.33 1 1 0 0 0 0 0
............................................................................................................................................CTATAGAGGGACCGTATTCT.......... 20 0 3 0.33 1 0 1 0 0 0 0
....................................AAAGAATAATCGGAATTTGAGGAA.............................................................................................................. 24 2 20 0.30 6 6 0 0 0 0 0
.........................................................................................................................................CTTCTATAGAGGGACCGTAT............. 20 0 4 0.25 1 1 0 0 0 0 0
........................................................GGAAGTGGTGGTTTACGAGA.............................................................................................. 20 0 8 0.25 2 1 1 0 0 0 0
........................................................................................................................................GCTTCTATAGAGGGACCGTG.............. 20 1 4 0.25 1 0 1 0 0 0 0
................................................................................................................................................AGAGGGACCGTATTCTTTT....... 19 0 5 0.20 1 1 0 0 0 0 0
.......................................................AGGAAGTGGTGGTTTACGA................................................................................................ 19 0 20 0.20 4 2 0 0 0 0 2
...............................................................................................................................................TAGAGGGACCGTATTCTTTT....... 20 0 5 0.20 1 1 0 0 0 0 0
...........................................AATCGGAACTTGAGGAAGTGGTGGTT..................................................................................................... 26 0 5 0.20 1 0 1 0 0 0 0
...................................................................................................ACCACAGTTTCACTCAACCCCT................................................. 22 0 5 0.20 1 1 0 0 0 0 0
..................................................ACTTGAGGAAGTGGTGGTT..................................................................................................... 19 0 6 0.17 1 1 0 0 0 0 0
...............................................GGAACTTGAGGAAGTGGTG........................................................................................................ 19 0 6 0.17 1 1 0 0 0 0 0
...........................................AATCGGAACTTGAGGAAGTCATGTTT..................................................................................................... 26 3 6 0.17 1 0 0 0 0 1 0
.............................................ACGGAACTTGAGGAAGTGGTGGT...................................................................................................... 23 1 7 0.14 1 0 1 0 0 0 0
....................................................................................................................CCCGTCAGTGAATAGGACTT.................................. 20 3 8 0.13 1 1 0 0 0 0 0
.........................................................GAAGTGGTGGTTTACGAGACC............................................................................................ 21 0 8 0.13 1 1 0 0 0 0 0
.........................................................GAAGTGGTGGTTTACGAGACCGGTT........................................................................................ 25 0 8 0.13 1 1 0 0 0 0 0
........................................................GGAAGTGGTGGTTTACGAGAC............................................................................................. 21 0 8 0.13 1 1 0 0 0 0 0
..................................................CCCTGAGGAAGTGGTGGTT..................................................................................................... 19 2 9 0.11 1 0 1 0 0 0 0
...........................................................AGTGGTGGTTTACGAGACCGGT......................................................................................... 22 0 9 0.11 1 0 1 0 0 0 0
...............................................GGAACTTGAGGAAGTCATG........................................................................................................ 19 2 9 0.11 1 1 0 0 0 0 0
........................................................GGAAGTGGTGGTTTACGAG............................................................................................... 19 0 20 0.10 2 2 0 0 0 0 0
..........................................................CAGTGGTGGTTTACGAGACC............................................................................................ 20 1 11 0.09 1 0 1 0 0 0 0
........................................................TGAAGTGGTGGTTTACGAG............................................................................................... 19 1 20 0.05 1 1 0 0 0 0 0
.....................................................TGAGGAAGTGGTGGTTTACG................................................................................................. 20 0 20 0.05 1 1 0 0 0 0 0
....................................................TTGAGGAAGTGGTGGTTTACGA................................................................................................ 22 0 20 0.05 1 0 1 0 0 0 0
......................................................GAGGAAGTGGTGGTTTAC.................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0
........................................................GGAAGTGGTGGTTTACGA................................................................................................ 18 0 20 0.05 1 1 0 0 0 0 0
......................................................AAGGAAGTGGTGGTTTACGAG............................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0
.....................................................AAAGGAAGTGGTGGTTTACGA................................................................................................ 21 2 20 0.05 1 1 0 0 0 0 0
......................................................GAGGAAGTGGTGGTTTACG................................................................................................. 19 0 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_148:4820-4989 - dps_227 AGC--AGGACGATTTGTA---------------------------AGTGTTATGGGG-----G------GC-------CTAAT------TTTCTTTTTAGCCTTGAACTCCTTCACCACCAAATGCTCTGGCCAAAAATTTGGCAGAGAAAATGGTGTCAAAGTGAGTTGGGGAGACACTTATCTTGAACGAAGATATCTCCCTGGCATAAGAAAAATTAAAC
droPer2 scaffold_165:19820-19989 - AGC--AGGACGATTTGTA---------------------------AGTGTTATGGGG-----G------GC-------CTAAT------TTTCTTTTTAGCCTTGAACTCCTTCACCACCAAATGCTCTGGCCAAAAATTTGGCAGAGAAAATGGTGTCAAAGTGAGTTGGGGAGACACTTATCTTGAACGAAGATATCTCCCTGGCATAAGAAAAATTAAAC
droWil2 scf2_1100000004958:1500098-1500265 - TGT--GGCAGGAA----------------------------TAGTATTAGTATCGGT-----T------GC-------CGATT------TTTCTTTTTTACAGTATATTCCTTAACTATTATATGTTTGGGCCAAAAATT-TTCTCGACATATAGTGTCGAAGATATTGGCAGAAACACTAATTTTAAAGGACGAAATGTCCCGAGAATAAGAAAATTTAAAC
droVir3 scaffold_12855:10124855-10125014 - AGG--GACT------GGA---------------------------AGGGTGACAGGC-----TGG----------------TT------ACGCTTTTTAGGCTTGAACTCATGAACAATCATGTGTGGTGGCCAAAATTT-GGGATCACAAATGATTGGGAACATATCATGTGAAACATTTATTTTGAATGATGATATTTCACGTGGGGTGGAGAAATTAAAT
droMoj3 scaffold_6500:31993273-31993443 + ACCGAAGGTA------------------------------AATTTACTGAAATAGGA-----GTCGA---T-------CTGTT------ACGATTTTTAGGTTTGAACTCATGAACAACTACATGAGGTGGCCAGACATT-AGGATCACATAAAGTTTTAAAATAATCTACCGGCACACTAATATTGAATGAAGCAATTTCTCGAGGAGTTGCAAAACTAAAC
droAna3 scaffold_13250:2139042-2139212 + AGA--TGAG----GTGGA---------------------------AGGTTGGTCAGT-----A------GCCGTTTTT---TTTTT---CGCCGTACTTGGCTGATGTTCTTGGACGAAAATATTCTCTGGCCAAAAGCT-GGCGGAACAAATCGTCTTGAACATCTGTAAGGGCACGCGTATTTTGAAAGATGACGTGTGCCTGGTGTAT-AAATATTAAAA
droBip1 scf7180000395020:2280-2482 + AGG--TGGAAGGTTGGTC--AGTGGTTCCGATATGGGGAAGTCTTACTTCCACTGGT-----TTTATA-------ACT---TTTATCTTTACGGAACTAGGCTGATGTTCTTGGACGAAAATATTCTCTGGCCAAAAACT-GGAAGAACAAATCGTCTTGAACATGAGCGCGGGCACACGAATCTTGAAAGAAGACGTGCGCCGTGTATAATTATATTTAAAT
droKik1 scf7180000301906:12475-12640 - AGT--AGGAAG------------------------------AGTAATTCCTACAGGC-----CGCTTT-------------TT------CTTTTCCTTATCTTCGAACTCTTTGACAACCACATGCTGTGGCCAGGTTTG-GGCAGAGCATAGAGTGCCAAAGATTTCGTTAGGGACATTTATCTTGAAAGACGAAATGTTCCAAGGATACGAAAATTTAAAT
droFic1 scf7180000453168:19570-19749 - AGCTAAGGACGAAGC-------------------------AGTTTGTTGGTCTAGGCTGGGGA------GT-------TTTAT---TC-TTTTATTTTTGCTACGAACTCCTAAACCACCATTTTTGCGGGCCAAAAATC-GCTCGAGCATAGGGTGTTAAAAAGTTCGTCGGGAACACTTATCTTGAAAGATGAGATGTTCCTAGCATATGAGAAGTTAAAT
droEle1 scf7180000491238:1081851-1082031 + AGA--AGAGT----C---------GGGCCTCGACTGGGAAGACTGTCTCTGACGGGC-----CTTTTC-------------TT------TTTTGTCTT-CCTTCGAACCCTTTTACCACCATATGTTGCGGACAAAAGTC-GGCAGGGCATTTGGTTTCAAAGAATTCGTTTGGGACAGTGATTTTGAA-GATAAAATATCCCTAGCACAAGAAAAGTTGACT
droRho1 scf7180000780203:299-464 + ACT--AGGAA------------------------------GTTTTACTCCTACGGGT-----CCCTTC-------------TT------CTTTATCTTAGCCTCGAACTCTTTTACAACCATATTATCCGGCCAAAAGTC-GCCCGAGCATATGGCTTCAAAAAGCTCGTTAGGGACAGTTATCTTGAAAGATGAAATGTCTCTAGCATAAGAAAACTTAAAC
droBia1 scf7180000301321:32614-32794 - AGA--TGAATG--------------GCCTTTTAAAGGGATTTCCAACTTCCTTTGAA-----AGAATT-------------TT------ATTTTTTCAAGCCTCGTACTCTTA-AAAAAAATGCCTGCAGGTCAAAAGTT-GGCTGAGCACAGCGTAGCAAAATGAGCTCAGGGAACACCGATCTTAAATGATGATACTTCCCTAGCATATGAAAAATTAAAT
droTak1 scf7180000410631:17235-17417 - GAT--ATGGAT-------------GGCTCTTTAAAAGGATTTCCAACTTCCTTTGAA-----CGAATT-------------TT------CTTTTTTCTAGCTTCGTACTCTTTAACAAAAATGCCTGCAGGCCAAAAATT-GGCTGATCACATCGTTGCAAAATGAGCATAGGGAACACCGATCTTAAATGATGATACTTCCCTAGCATATGGAAAATTAAAT
droEug1 scf7180000408096:14570-14752 + AGC--GTTTACTTGTGGA---------------------AGCTTTACTCCTAAAGGG-----CGACT--------TCT---TTCTTCTTTTTATTTTTAAGCTGATGTTCTTGAACGAAAATATGTTGCGGCCAGAAATT-GGTCGAACAGATATCGTCAAAAGCCATCGGAGGAACACGAATCTTGAAAGATGTCACGTTCCTAGCGTAGGAATATTTATAC
dm3 chrUextra:14140923-14141090 - GGA--AG----------------------------------TTCAATTCCCACGGGC-----CCCTTTTTC-------CTATT------TTTGGTCTTAGCTTCGAACTCTTTTACCACCATACTATCCGGCCAAAAATC-ACCAGAACATATGGTCGAAAAAAGCTCGTTTGGGACAGTTATCTTGAAAGATGATATGTCCCTAGCGTAAGAGAAGATAAAT
droSim2 node_38189:25997-26145 + ATG-----------------------------------------------------C-----CCCTTTTTC-------CTATT------TTTGATCTTAGCTTTGAATTCTTTTACCACCATACTATCCGGCCAAAAATC-ACCCGAACATATGGTCGAAAAGAGCTTGTTTGGGACAGTTATCTTGAAAGATGA--TGTCCCTAGCGTAAGAGAAGTTAAAT
droSec2 scaffold_2000:4167-4329 + AAG--ATGAAGAGGCGGA---------------------------TG-----------------GTTTTTC-------TTATT------TTTGATCTTAGCTTCAAACTCTTTTACCACCATACTATCCGGCCAAAAATC-ACCCGAACATATGGTCGAAAAGAGCTCGTTTGGGACAGTTATCTTAAAAGATAATATGTCCCTAGCATAAGAGAAGTTAAAT
droYak3 chr2h:42322-42492 + ATC--AGGCC-------------------ACGTGCGGGA-AGTTTATTCCCACGGGC-----CCTTTTTTT-------CTATC------TTTAATCTTAGCTTCGAACTCTTTCACCACCAAACTATTTGGCCAAAAAT------------AAGGTCGAGAATAGCTCATAAGGGACAGTTATCTTGAAGGATGAGATGTCCTAAGCGTAAAAAGAATTAAAT
droEre2 scaffold_4770:310173-310355 - AAG--AGGAGGTA---GTGGTC--TGGCCACGTGATGTAAGTTTAATTCCCACTGGC-----CCTGTTTTC-------CC--------------------ATTCGAACTCTTTCGCTACCTTACTATCTGGCCAAAAATC-AGCAGAACATATAGTCGAAAACAGCTTATTAGGTACAGTTGTCTTGAAAGATGAAATGTCCCTAGCGTAAGAAAAATTAAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
AGC--AGGACGATTTGTA---------------------------AGTGTTATGGGG-----G------GC-------CTAAT------TTTCTTTTTAGCCTTGAACTCCTTCACCACCAAATGCTCTGGCCAAAAATTTGGCAGAGAAAATGGTGTCAAAGTGAGTTGGGGAGACACTTATCTTGAACGAAGATATCTCCCTGGCATAAGAAAAATTAAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................TGAACTCCTTCACCACCAAATGCTC...............................................................................................25310.6732019120000100
.......................................................................................................TGAACTCCTTCACCACCAAATGCT................................................................................................2431.3340120000010
......................................................................................................................................................................................TCTTGAACGAAGATATCTCCC....................2131.0030300000000
..........................................................................................................................................................................................GAACGAAGATATCTCCCTGGC................2130.6720200000000
..........................................................................................................................................................................................GAACGAAGATATCTCCCTGGCA...............2230.6720200000000
.......................................................................................................TGAACTCCTTCACCACCAAATGC.................................................................................................2330.6720110000000
......................................................................................................................................................................................TCTTGAACGAAGATATCTCCCTGG.................2430.6720200000000
.....................................................................................................................................................................AGTTGGGGAGACACTTATCTT.....................................2130.6720200000000
........................................................................................................................................................TGGTGTCAAAGTGAGTTGGG...................................................2050.4020000000020
......................................................................................................................................................................................TCTTGAACGAAGATATCTCCCTGGC................2530.3310100000000
..........................................................................................................................................................................................GAACGAAGATATCTCCCTGGT................2130.3310001000000
......................................................................................................................................................................................TCTTGAACGAAGATATCTCCCTGGCA...............2630.3310100000000
.......................................................................................................................................................................................CTTGAACGAAGATATCTCCCTGG.................2330.3310100000000
......................................................................................................................................................................GTTGGGGAGACACTTATCTTG....................................2130.3310000001000
........................................................................................................................................................................................TTGAACGAAGATATCTCCCTGGCATA.............2630.3310000000010
........................................................................................................................................................................................TTGAACGAAGATATCTCCCTGGA................2330.3310000000010
.........................................................................................................................................................................................TGAACGAAGATATCTCCCTGGCATA.............2530.3310000000010
....................................................................................................CCTTGAACTCCTTCACCACCAAATGCTC...............................................................................................2830.3310100000000
......................................................................................................................................................................................TCTTGAACGAAGATATCTCCCTGGA................2530.3310100000000
........................................................................................................................................................................TGGGGAGACACTTATCTTGAACGAAGA............................2730.3310000000010
.......................................................................................................TGAACTCCTTCACCACCAAATGCTCA..............................................................................................2630.3310100000000
........................................................................................................GAACTCCTTCACCACCAAATGCTC...............................................................................................2430.3310100000000
...............................................................................................................................................................AAAGTGAGTTGGGGAGACACTT..........................................2230.3310100000000
.......................................................................................................TGAACTCCTTCACCACCAAATGCC................................................................................................2440.2510010000000
....................................................................................................CCTTGAACTCCTTCACCACCAAATG..................................................................................................2550.2010100000000
.......................................................................................................TGAACTCCTTCACCACCAAATG..................................................................................................2250.2010010000000
....................................................................................................CCTTGAACTCCTTCACCACC.......................................................................................................2060.1710100000000
...........................................................................................................................................................TGTCAAAGTGAGTTGGGGAGA...............................................2160.1710100000000
droPer2
AGC--AGGACGATTTGTA---------------------------AGTGTTATGGGG-----G------GC-------CTAAT------TTTCTTTTTAGCCTTGAACTCCTTCACCACCAAATGCTCTGGCCAAAAATTTGGCAGAGAAAATGGTGTCAAAGTGAGTTGGGGAGACACTTATCTTGAACGAAGATATCTCCCTGGCATAAGAAAAATTAAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................GTCAAAGTGAGTTGGGGA.................................................1880.252001001
...............................................................................................................................................................AAAGTGAGTTGGGGAGACA.............................................1970.141100000
.......................................................................................................TGAACTCCTTCACCACCAAATGC.................................................................................................2380.131010000
droWil2
TGT--GGCAGGAA----------------------------TAGTATTAGTATCGGT-----T------GC-------CGATT------TTTCTTTTTTACAGTATATTCCTTAACTATTATATGTTTGGGCCAAAAATT-TTCTCGACATATAGTGTCGAAGATATTGGCAGAAACACTAATTTTAAAGGACGAAATGTCCCGAGAATAAGAAAATTTAAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............A----------------------------TAGTATTAGTATCGGT-----T------GC-------C................................................................................................................................................2121.00200011
.............................................................................................................................................................TCGAAGATATTGGCAGAAACACTAATTT......................................28200.8517017000
...........AA----------------------------TAGTATTAGTATCGGT-----T------GC-------C................................................................................................................................................2220.50100010
...........................................................................................................................TGTTTGGGCCAAAAATT-TTCT..............................................................................2120.50101000
...........AA----------------------------TAGTATTAGTATCGGT-----T------GC-------.................................................................................................................................................2120.50100010
.............................................ATTAGTATCGGT-----T------GC-------CGAT.............................................................................................................................................1920.50100010
.........................................................................................................................................................................................TAAAGGACGAAATGTCCCGAGAATAA............26200.35707000
........................................................................................................................................AATT-TTCTCGACATATAGTGT.................................................................2160.33200011
TGT--GGCAGGAA----------------------------TAGTATTAGTA...........................................................................................................................................................................2230.33100001
................................................................................................................TAACTATTATATGTTTGGGCC..........................................................................................2140.25110000
...............................................................................................................TTAACTATTATATGTTTGGGC...........................................................................................2140.25101000
.........................................................................................................................................................................................TAAAGGACGAAATGTCCCGAGAATAAGA..........28200.25503020
.........................................................................................................................................ATT-TTCTCGACATATAGT...................................................................1870.14100010
...............................................................................................................................................................GAAGATATTGGCAGAAACACTAATT.......................................25200.10200020
.....................................................................................................................................................................................................TGTCCCGAGAATAAGAAAATTTAAAC26200.05100010
.................................................................................................TTACAGTATATTCCTTAACTATTA......................................................................................................24200.05100010
....................................................................................................................................................................TATTGGCAGAAACACTAATTTTAAAGGA...............................28200.05100010
................................................................................................................................................................AAGATATTGGCAGAAACACTA..........................................21200.05100100
.............................................................................................TTTTTTACAGTATATTCCTTAAC...........................................................................................................23200.05101000
................................................................................................................................................................................CACTAATTTTAAAGGACGAAATGTCC.....................26200.05100010
....................................................................................................CAGTATATTCCTTAACTATTA......................................................................................................21200.05101000
......................................................................................................................................................................TTGGCAGAAACACTAATTTTA....................................21200.05100010
....................................................................................................................................................................TATTGGCAGAAACACTAATTT......................................21200.05100001
droVir3
AGG--GACT------GGA---------------------------AGGGTGACAGGC-----TGG----------------TT------ACGCTTTTTAGGCTTGAACTCATGAACAATCATGTGTGGTGGCCAAAATTT-GGGATCACAAATGATTGGGAACATATCATGTGAAACATTTATTTTGAATGATGATATTTCACGTGGGGTGGAGAAATTAAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................TGACAGGC-----TGG----------------TT------ACGCTTTTTAGGCT........................................................................................................................27203.807600000000000000000000000020000000000488000000000000000000000000000
........................................................................................................GAACTCATGAACAATCATGTGTGGT..............................................................................................25203.356700220000000000000000000000450000000000000000000000000000000000000
........................................................................................................GAACTCATGAACAATCATGTGTGGTGG............................................................................................27202.955900000000000000000000000002500000000000340000000000000000000000000
.............................................................................................................................................................................................TGATGATATTTCACGTGGGGTGGAGA........2612.002000000000000000000000000000000100001000000000000000000000000000
.........................................................................................................................................................................................TGAATGATGATATTTCACGTGGGGTGG...........2712.002000000000000000000000000000000001001000000000000000000000000000
........................................................................................................................................................TGATTGGGAACATATCATGTGAAACA.............................................26201.80360000000000000000000000003600000000000000000000000000000000000000
....................................................................................................................................................................TATCATGTGAAACATTTATTTTGAAT.................................26201.50300000000000000000000000000300000000000000000000000000000000000000
.........................................................................................................................................................................................TGAATGATGATATTTCACGTGGGGTG............2611.001000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................................................TGATGATATTTCACGTGGGGTGGAG.........2511.001000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................TGAATGATGATATTTCACGTGGGG..............2421.002000000000000000000000000000000001001000000000000000000000000000
........................................................................................................................................................TGATTGGGAACATATCATGTGA.................................................22200.70140000000000000000000000001400000000000000000000000000000000000000
.................................................TGACAGGC-----TGG----------------TT------ACGCTTTTTAG...........................................................................................................................24200.459000000000000000000000000000000000000009000000000000000000000000
........................................................................................................................................................TGATTGGGAACATATCATGTGAAAC..............................................25200.408000000800000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGGGAACATATCATGTGAAACATTT..........................................25200.357000000000000000000000000000700000000000000000000000000000000000
.......................................................................................................TGAACTCATGAACAATCATGTGT.................................................................................................23200.357000000000000000000000000000020100004000000000000000000000000000
.................................................TGACAGGC-----TGG----------------TT------ACGCTTTTTAGGCTA.......................................................................................................................28200.306000000000000000000000000000000002000040000000000000000000000000
........................................................................................................GAACTCATGAACAATCATGTG..................................................................................................21200.255000000000000000000000000000500000000000000000000000000000000000
........................................................................................................................................................TGATTGGGAACATATCATGT...................................................20200.204000000000000000000000004000000000000000000000000000000000000000
.................................................................................................................................................TCACAAATGATTGGGAACATATCAT.....................................................25200.153000000000000000000000000000000030000000000000000000000000000000
........................................................................................................................................................TGATTGGGAACATATCATGTG..................................................21200.153000000000000000000001000000000020000000000000000000000000000000
...............................................GGTGACAGGC-----TGG----------------TT------ACG...................................................................................................................................18200.153000000000000000000000000000000000000000000000000000000000000003
.........................................................................................................................................................................................TGAATGATGATATTTCACGTGGT...............2390.111000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................................TGAAACATTTATTTTGAATGATGATA..........................26200.102002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TGATTGGGAACATATCATGTGAAACAT............................................27200.102000000000010000100000000000000000000000000000000000000000000000
..................................................................................................................ACAATCATGTGTGGTGGCCAAAATT....................................................................................25200.102000000000000000000000000000100000000100000000000000000000000000
...............................................................................................................TGAACAATCATGTGTGGTGGCCAAA.......................................................................................25200.102002000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TGAACAATCATGTGTGGTGGC...........................................................................................21200.102000000000000000000000000000002000000000000000000000000000000000
.................................................................................................................AACAATCATGTGTGGTGG............................................................................................18200.102000000000000000000000000000200000000000000000000000000000000000
........................................................................................................................ATGTGTGGTGGCCAAAATTT-GGGATCA...........................................................................27200.102000000000100000000000000000000000000001000000000000000000000000
...............................................................................................................................................................GAACATATCATGTGAAACATTTATTT......................................26200.102000000000000000000000000002000000000000000000000000000000000000
........................................................................................................GAACTCATGAACAATCATGTGTGG...............................................................................................24200.102000000000000000000000000000020000000000000000000000000000000000
.................................................TGACAGGC-----TGG----------------TT------ACGCTA................................................................................................................................19200.102000000000000000000000000000000000020000000000000000000000000000
...................................................................................................................................................ACAAATGATTGGGAACATATCATGTGA.................................................27200.102000000000000000000000000000000002000000000000000000000000000000
.................................................TGACAGGC-----TGG----------------TT------ACGCTTTTTAGGA.........................................................................................................................26200.102000000000000000000000000002000000000000000000000000000000000000
........................................................................................................................................................................ATGTGAAACATTTATTTTGAATG................................23200.102000000000000000000000000020000000000000000000000000000000000000
........................................................................................................GAACTCATGAACAATCATGTGTGGTG.............................................................................................26200.102000000000000000000000000000010100000000000000000000000000000000
..................................................................................................AGGCTTGAACTCATGAACAATCATGTGT.................................................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................AACTCATGAACAATCATGTGTGGTGGC...........................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
........................................................C-----TGG----------------TT------ACGCTTTTTAGGCTT.......................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
................................................................G----------------TT------ACGCTTTTTAGGCTT.......................................................................................................................18200.051000010000000000000000000000000000000000000000000000000000000000
...............................................................................................................................GTGGCCAAAATTT-GGGATCACAAT.......................................................................24200.051000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................T-GGGATCACAAATGATTGGGAACATAT........................................................27200.051000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................CTTGAACTCATGAACAATCATGTGTGG...............................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................TCATGTGAAACATTTATTTTGAATGATG.............................28200.051000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................AAAATTT-GGGATCACAAATGATTGGG...............................................................26200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................................................TCATGAACAATCATGTGTGGTGG............................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TTTTGAATGATGATATTTCAC....................21200.051000000000000000000000000000000000000000000000000000001000000000
..................................................................................T------ACGCTTTTTAGGCTTGAACTCATGAAC...........................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TGTGAAACATTTATTTTGAATGATGA............................26200.051000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................ATCACAAATGATTGGGAACATA.........................................................22200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................TGAACAATCATGTGTGGTGG............................................................................................20200.051000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................TGATTGGGAACATATCATGTGAAAA..............................................25200.051000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................TGATTGGGAACATATCAT.....................................................18200.051000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................TGAACAATCATGTGTGGTGGCCAAAAA.....................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................TGAACAATCATGTGTGGTGGCC..........................................................................................22200.051000000000000000000000000000001000000000000000000000000000000000
.................................................TGACAGGC-----TGG----------------TT------ACGCTTTTTC............................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................TGAACTCATGAACAATCATGTGTGGTGGCC..........................................................................................30200.051000000000000000000000000000000000000000000000010000000000000000
..................................................................................................................................GCCAAAATTT-GGGATCACAAATGAT...................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................TTT-GGGATCACAAATGATTGGG...............................................................22200.051000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................TT-GGGATCACAAATGATTGGGAACC...........................................................25200.051000000000000000000000000000000000000000100000000000000000000000
............................................................................................................TCATGAACAATCATGTGTGGTGGCCAAA.......................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTGAACTCATGAACAATCATGTGTGGTG.............................................................................................28200.051000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................ATGTGAAACATTTATTTTGAATGATGA............................27200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................TGTGTGGTGGCCAAAATTT-GG................................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
.GG--GACT------GGA---------------------------AGGGTGACAGGC-----T................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................ACAAATGATTGGGAACATATCAT.....................................................23200.051000000100000000000000000000000000000000000000000000000000000000
...................................................................................................................................................ACAAATGATTGGGAACATATCATGT...................................................25200.051000000000000000000000000000000000000010000000000000000000000000
....................................................CAGGC-----TGG----------------TT------ACGCTTTTTAGG..........................................................................................................................22200.051000000000000000000000000000000001000000000000000000000000000000
....................................................................................................................................................................TATCATGTGAAACATTTATTTTGAATGA...............................28200.051000000000000000000000000000000000000000100000000000000000000000
.................................................TGACAGGC-----TGG----------------TT------ACGCTTTT..............................................................................................................................21200.051000010000000000000000000000000000000000000000000000000000000000
............................................................................................................TCATGAACAATCATGTGTGGTGGCT..........................................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................ACAATCATGTGTGGTGGCCAAAATTT-G.................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................TGAACTCATGAACAATCATGTGTGGT..............................................................................................26200.051000000100000000000000000000000000000000000000000000000000000000
.................................................TGACAGGC-----TGG----------------TT------ACGCTT................................................................................................................................19200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................CATATCATGTGAAACATTTATTTTGAA..................................27200.051000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................AACTCATGAACAATCATGTGTGGTGG............................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................AATCATGTGTGGTGGCCAAAATTT-G.................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................TGGGAACATATCATGTGAA................................................19200.051000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................TGAACTCATGAACAATCATGTG..................................................................................................22200.051000000000000000000000000000000000000000000100000000000000000000
.....................................................................................................................................................................ATCATGTGAAACATTTATTTTGAATGA...............................27200.051000000000000000000000000000100000000000000000000000000000000000
.................................................................................................TAGGCTTGAACTCATGAACAATCATGTG..................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TGTGAAACATTTATTTTGAATGATGATA..........................28200.051000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................T-GGGATCACAAATGATTGG................................................................19200.051000000000000000000000000000000000000001000000000000000000000000
.................................................TGACAGGC-----TGG----------------TT------ACGCTTTTTAGGC.........................................................................................................................26200.051000000000000000000000000000100000000000000000000000000000000000
........................................................................................................GAACTCATGAACAATCATGTGTGGTGGA...........................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................TTT-GGGATCACAAATGATTGGGAACAT..........................................................27200.051000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................ACATATCATGTGAAACATTTA.........................................21200.051000000000000000000000000100000000000000000000000000000000000000
................................................................................................................GAACAATCATGTGTGGTGGCCAAAA......................................................................................25200.051000000000000000000000000000000000000010000000000000000000000000
.................................................TGACAGGC-----TGG----------------TT------ACGCTTTTTAGGCTG.......................................................................................................................28200.051000000000000000000000000001000000000000000000000000000000000000
..................................................GACAGGC-----TGG----------------TT------ACGCTTTTTAG...........................................................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
droMoj3
ACCGAAGGTA------------------------------AATTTACTGAAATAGGA-----GTCGA---T-------CTGTT------ACGATTTTTAGGTTTGAACTCATGAACAACTACATGAGGTGGCCAGACATT-AGGATCACATAAAGTTTTAAAATAATCTACCGGCACACTAATATTGAATGAAGCAATTTCTCGAGGAGTTGCAAAACTAAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................TACATGAGGTGGCCAGACATT-AGGAT.............................................................................2611.001100000
..............................................................................................................................................................................CACACTAATATTGAATGAAGCAAT.........................2411.001100000
.......................................................................................................................TACATGAGGTGGCCAGACATT-ACT...............................................................................2411.001010000
.........................................................................................................................................................................................TGAATGAAGCAATTTCTCGAGGAGTTG...........2711.001000001
.......................................................................................................................TACATGAGGTGGCCAGACATT-AGG...............................................................................2411.001100000
..........................................TTTACTGAAATAGGA-----GTCGA---T-------CTGT.............................................................................................................................................25170.82141000022
.........................................ATTTACTGAAATAGGA-----GTCGA---T-------CTG..............................................................................................................................................25170.71121200000
.........................................ATTTACTGAAATAGGA-----GTCGA---T-------CT...............................................................................................................................................24170.417500011
..........................................TTTACTGAAATAGGA-----GTCGA---T-------CTGTT------......................................................................................................................................26160.386600000
..........................................TTTACTGAAATAGGA-----GTCGA---T-------CTG..............................................................................................................................................24170.356600000
.........................................ATTTACTGAAATAGGA-----GTCGA---T-------CTGT.............................................................................................................................................26170.295400001
...............................................TGAAATAGGA-----GTCGA---T-------CTGTT------ACGATT................................................................................................................................27140.294300010
.........................................ATTTACTGAAATAGGA-----GTCGA---T-------CTGTT------......................................................................................................................................27160.193300000
.........................................ATTTACTGAAATAGGA-----GTCGA---T-------C................................................................................................................................................23170.122110000
...............................................................................................................TGAACAACTACATGAGGTGGC...........................................................................................21200.102200000
..........................................TTTACTGAAATAGGA-----GTCGA---T-------CTGTT------ACG...................................................................................................................................29130.081000010
..........................................TTTACTGAAATAGGA-----GTCGA---T-------CTGTT------A.....................................................................................................................................27140.071100000
...............................................TGAAATAGGA-----GTCGA---T-------CTGTT------ACGA..................................................................................................................................25140.071100000
...............................................TGAAATAGGA-----GTCGA---T-------CTGTT------ACGAT.................................................................................................................................26140.071000010
............................................TACTGAAATAGGA-----GTCGA---T-------CTGTT------AC....................................................................................................................................26140.071100000
..........................................TTTACTGAAATAGGA-----GTCGA---.........................................................................................................................................................20170.061100000
........TA------------------------------AATTTACTGAAATAGGA-----GTCGA---T-------.................................................................................................................................................25170.061000010
..........................................TTTACTGAAATAGGA-----GTCGA---T-------.................................................................................................................................................21170.061010000
........TA------------------------------AATTTACTGAAATAGGA-----GTCGA---T-------C................................................................................................................................................26170.061100000
...........................................TTACTGAAATAGGA-----GTCGA---T-------CTGT.............................................................................................................................................24170.061100000
..........................................TTTACTGAAATAGGA-----GTCGA---T-------CT...............................................................................................................................................23170.061100000
............................................TACTGAAATAGGA-----GTCGA---.........................................................................................................................................................18180.061100000
............................................TACTGAAATAGGA-----GTCGA---T-------CTGT.............................................................................................................................................23180.061100000
droAna3
AGA--TGAG----GTGGA---------------------------AGGTTGGTCAGT-----A------GCCGTTTTT---TTTTT---CGCCGTACTTGGCTGATGTTCTTGGACGAAAATATTCTCTGGCCAAAAGCT-GGCGGAACAAATCGTCTTGAACATCTGTAAGGGCACGCGTATTTTGAAAGATGACGTGTGCCTGGTGTAT-AAATATTAAAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................TGTTCTTGGACGAAAATATTCTCTGGCC..........................................................................................282018.0536103610000
.........................................................................................................TGTTCTTGGACGAAAATATTCTCTGGC...........................................................................................272012.9025802580000
........................................................................................................................................................................................TTGAAAGATGACGTGTGCCTGGTG...............24201.95390390000
.........................................................................................................................................................................................TGAAAGATGACGTGTGCCTGGTG...............23201.90380370010
........................................................................................................ATGTTCTTGGACGAAAATATTCTCTGG............................................................................................27201.853719180000
..............................................................................................TACTTGGCTGATGTTCTTGGACGAA........................................................................................................25201.30262600000
..........................................................................................................GTTCTTGGACGAAAATATTCTCTGGC...........................................................................................26201.30260260000
.........................................................................TTTTT---TTTTT---CGCCGTACTTGGC.........................................................................................................................2311.001010000
........................................................................................................................................................TCGTCTTGAACATCTGTAAGGGCACGCG...........................................2811.001100000
..............................................................................................TACTTGGCTGATGTTCTTGGACGAAA.......................................................................................................26200.65131300000
..........................................................................................................GTTCTTGGACGAAAATATTCTCTGGCC..........................................................................................27200.55111100000
................................................................................................................................................................................CGCGTATTTTGAAAGATGACGTGTGCC....................27100.505050000
.........................................................................................CGCCGTACTTGGCTGATGTTCTTGGAC...........................................................................................................2750.402020000
....................................................................................................................................................................................TATTTTGAAAGATGACGTGTGCCT...................24200.357007000
..................................................................................................................................................AACAAATCGTCTTGAACATCTGTAAGGG.................................................2830.331100000
.........................................................................................CGCCGTACTTGGCTGATGTTCTTGG.............................................................................................................2550.201010000
.........................................................................................................................................................................................TGAAAGATGACGTGTGCCTGGTGT..............24200.204004000
.....................................................................................................CTGATGTTCTTGGACGAAAATATTCTC...............................................................................................27200.204004000
..........................................................................................GCCGTACTTGGCTGATGTTCTTGGAC...........................................................................................................2650.201010000
........................................................................................................................................AGCT-GGCGGAACAAATCGTCTTGAACA...........................................................27200.204400000
.........................................................................................CGCCGTACTTGGCTGATGTTCTTGGA............................................................................................................2650.201010000
....................................................................................TT---CGCCGTACTTGGCTGATGTTCTTGT.............................................................................................................2750.201001000
.........................................................................................................................................................................................TGAAAGATGACGTGTGCCTGG.................21200.204400000
..........................................................................................................GTTCTTGGACGAAAATATTCTCTGGCCAA........................................................................................29200.204400000
...........................................................................................................................................................................................AAAGATGACGTGTGCCTGGTG...............21200.153003000
...........................................................................................................TTCTTGGACGAAAATATTCTCTGG............................................................................................24200.153300000
........................................................................................................................................................................................TTGAAAGATGACGTGTGCCTGGTGTAT-A..........2880.131010000
...........................................................................................................................................................................................AAAGATGACGTGTGCCTGGTGTAT-A..........2590.111010000
.........................................................................................................TGTTCTTGGACGAAAATATTCTCT..............................................................................................24200.102200000
.................................................................................................................GACGAAAATATTCTCTGGCCAAAAGC....................................................................................26200.102020000
.....................................................................................................CTGATGTTCTTGGACGAAAATATTCTCT..............................................................................................28200.102020000
.......................................................................................................GATGTTCTTGGACGAAAATATTCTC...............................................................................................25200.102200000
..........................................................................................................................................................................................GAAAGATGACGTGTGCCTGGTGTAT-...........25200.102200000
.................................................................................................................................................................................GCGTATTTTGAAAGATGACGTGTGC.....................25120.081001000
........................................................................................................ATGTTCTTGGACGAAAATATTCTCTG.............................................................................................26200.051010000
.......................................................................................................................................AAGCT-GGCGGAACAAATCGTCTTG...............................................................24200.051100000
.......................................................................................................................................AAGCT-GGCGGAACAAATCGTCTTGAAC............................................................27200.051010000
...........................................................................................................TTCTTGGACGAAAATATTCTCTGGCCAA........................................................................................28200.051100000
........................................................................................................................................................................................TTGAAAGATGACGTGTGCCT...................20200.051010000
.........................................................................................................................................GCT-GGCGGAACAAATCGTCTTGAAC............................................................25200.051100000
..........................................................................................................................................CT-GGCGGAACAAATCGTCTTG...............................................................21200.051100000
..........................................................................................................................................................................................GAAAGATGACGTGTGCCTGGTG...............22200.051100000
...........................................................................................................................................T-GGCGGAACAAATCGTCTTGAACA...........................................................24200.051100000
........................................................................................................ATGTTCTTGGACGAAAATATTCT................................................................................................23200.051010000
........................................................................................................................................................................................TTGAAAGATGACGTGTGC.....................18200.051001000
.....................................................................................................................AAAATATTCTCTGGCCAAAAGCT-..................................................................................23200.051100000
..........................................................................................................................................................................................GAAAGATGACGTGTGCCTGGTGTA.............24200.051100000
......................................................................................................TGATGTTCTTGGACGAAAATATTCC................................................................................................25200.051010000
droBip1
AGG--TGGAAGGTTGGTC--AGTGGTTCCGATATGGGGAAGTCTTACTTCCACTGGT-----TTTATA-------ACT---TTTATCTTTACGGAACTAGGCTGATGTTCTTGGACGAAAATATTCTCTGGCCAAAAACT-GGAAGAACAAATCGTCTTGAACATGAGCGCGGGCACACGAATCTTGAAAGAAGACGTGCGCCGTGTATAATTATATTTAAATSizeHit CountTotal NormTotal
No Reads
droKik1
AGT--AGGAAG------------------------------AGTAATTCCTACAGGC-----CGCTTT-------------TT------CTTTTCCTTATCTTCGAACTCTTTGACAACCACATGCTGTGGCCAGGTTTG-GGCAGAGCATAGAGTGCCAAAGATTTCGTTAGGGACATTTATCTTGAAAGACGAAATGTTCCAAGGATACGAAAATTTAAATSizeHit CountTotal NormTotal
No Reads
droFic1
AGCTAAGGACGAAGC-------------------------AGTTTGTTGGTCTAGGCTGGGGA------GT-------TTTAT---TC-TTTTATTTTTGCTACGAACTCCTAAACCACCATTTTTGCGGGCCAAAAATC-GCTCGAGCATAGGGTGTTAAAAAGTTCGTCGGGAACACTTATCTTGAAAGATGAGATGTTCCTAGCATATGAGAAGTTAAATSizeHit CountTotal NormTotal
No Reads
droEle1
AGA--AGAGT----C---------GGGCCTCGACTGGGAAGACTGTCTCTGACGGGC-----CTTTTC-------------TT------TTTTGTCTT-CCTTCGAACCCTTTTACCACCATATGTTGCGGACAAAAGTC-GGCAGGGCATTTGGTTTCAAAGAATTCGTTTGGGACAGTGATTTTGAA-GATAAAATATCCCTAGCACAAGAAAAGTTGACTSizeHit CountTotal NormTotal
No Reads
droRho1
ACT--AGGAA------------------------------GTTTTACTCCTACGGGT-----CCCTTC-------------TT------CTTTATCTTAGCCTCGAACTCTTTTACAACCATATTATCCGGCCAAAAGTC-GCCCGAGCATATGGCTTCAAAAAGCTCGTTAGGGACAGTTATCTTGAAAGATGAAATGTCTCTAGCATAAGAAAACTTAAACSizeHit CountTotal NormTotal
No Reads
droBia1
AGA--TGAATG--------------GCCTTTTAAAGGGATTTCCAACTTCCTTTGAA-----AGAATT-------------TT------ATTTTTTCAAGCCTCGTACTCTTA-AAAAAAATGCCTGCAGGTCAAAAGTT-GGCTGAGCACAGCGTAGCAAAATGAGCTCAGGGAACACCGATCTTAAATGATGATACTTCCCTAGCATATGAAAAATTAAATSizeHit CountTotal NormTotal
No Reads
droTak1
GAT--ATGGAT-------------GGCTCTTTAAAAGGATTTCCAACTTCCTTTGAA-----CGAATT-------------TT------CTTTTTTCTAGCTTCGTACTCTTTAACAAAAATGCCTGCAGGCCAAAAATT-GGCTGATCACATCGTTGCAAAATGAGCATAGGGAACACCGATCTTAAATGATGATACTTCCCTAGCATATGGAAAATTAAATSizeHit CountTotal NormTotal
No Reads
droEug1
AGC--GTTTACTTGTGGA---------------------AGCTTTACTCCTAAAGGG-----CGACT--------TCT---TTCTTCTTTTTATTTTTAAGCTGATGTTCTTGAACGAAAATATGTTGCGGCCAGAAATT-GGTCGAACAGATATCGTCAAAAGCCATCGGAGGAACACGAATCTTGAAAGATGTCACGTTCCTAGCGTAGGAATATTTATACSizeHit CountTotal NormTotal
No Reads
dm3
GGA--AG----------------------------------TTCAATTCCCACGGGC-----CCCTTTTTC-------CTATT------TTTGGTCTTAGCTTCGAACTCTTTTACCACCATACTATCCGGCCAAAAATC-ACCAGAACATATGGTCGAAAAAAGCTCGTTTGGGACAGTTATCTTGAAAGATGATATGTCCCTAGCGTAAGAGAAGATAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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....................................................................................................................................................................................TATCTTGAAAGATGATATGTCCCT...................24201.953900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000072000000000000000000000000260000002000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
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...................................................................................................................................................ACATATGGTCGAAAAAAGCTCGT.....................................................23201.302600000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140060000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................................................TCCGGCCAAAAATC-ACCAGAACATA.......................................................................2571.2990000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000020301010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................AAAAGCTCGTTTGGGACAGTTATC.......................................24201.25250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000400600000000000000000321700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................TTTGGTCTTAGCTTCGAACTC.................................................................................................................2180.8870000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000100000000000000000000000000000000000000000000000000000000001000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...........................................................................................TGGTCTTAGCTTCGAACTCTTTTACC..........................................................................................................2640.7530000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TGGTCTTAGCTTCGAACT..................................................................................................................1880.7560000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................GGGACAGTTATCTTGAAAGA...............................20200.601200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................ACCATACTATCCGGCCAAAAATC-ACCA..............................................................................2750.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AAAAGCTCGTTTGGGACAGTTATCTT.....................................26200.60120000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
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...............................................................................................................................................................................................ATGATATGTCCCTAGCGTAAGAGAAGA.....2770.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................................................................TC-ACCAGAACATATGGTCGAAAAAAGC.........................................................2770.5740000000000000000000000000000000000000000000000001001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................................................................................................TATCTTGAAAGATGATATGTCCCTA..................25200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TTGGTCTTAGCTTCGAACTCTTTTAC...........................................................................................................2680.5040000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TTGGTCTTAGCTTCGAACTC.................................................................................................................2080.5040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TCGTTTGGGACAGTTATCTTGAAAGAT..............................27200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000050000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000
......................................................................C-------CTATT------TTTGGTCTTAGCTTCGAAC...................................................................................................................2580.5040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
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................................................................................................................................................................AAAAGCTCGTTTGGGACAGT...........................................20200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000150400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AAAGATGATATGTCCCTAGCGTAAGAGAA.......29200.50100000000000000000000000000000000000000000000000000000000000540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TT------TTTGGTCTTAGCTTCGAACT..................................................................................................................2280.5040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................TCTTAGCTTCGAACTCTTTTA............................................................................................................21200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000302000000000000000000000000000000000000010000000000020000000000000000000000000000000000000000000000000000
..............................................................................................................................TCCGGCCAAAAATC-ACCAGAACATATGG....................................................................2840.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................TTGGGACAGTTATCTTGAAAGATG.............................24200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TT------TTTGGTCTTAGCTTCGAAC...................................................................................................................2180.5040000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................AAAAAGCTCGTTTGGGACAGTTATC.......................................25200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000600000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CGAAAAAAGCTCGTTTGGG................................................19200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................AAAGCTCGTTTGGGACAGTTATCTTGA...................................27200.4590000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000201100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000
....................................................................................................................................................CATATGGTCGAAAAAAGCTCGTT....................................................23200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100410000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
......................................................................................................................................................TATGGTCGAAAAAAGCTCGTTTGGGACAG............................................29200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................GAACATATGGTCGAAAAAAGC.........................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000001000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................................................TGATATGTCCCTAGCGTAAGAGAAGATA...2870.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
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..........................................................................................................................ACTATCCGGCCAAAAATC-ACCAGAAC..........................................................................2670.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...............................................................................TATT------TTTGGTCTTAGCTTCGA.....................................................................................................................2180.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................TTC-------CTATT------TTTGGTCTTAGC..........................................................................................................................2080.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................TTC-------CTATT------TTTGGTCTTAGCTTCGAA....................................................................................................................2680.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..............................................................................................TCTTAGCTTCGAACTCTTTTACCACCATAC...................................................................................................30200.3570000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.........................................................................................TTTGGTCTTAGCTTCGAACTCTTTTTT...........................................................................................................2790.3330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................................................................AACATATGGTCGAAAAAAGCTCGTTTG..................................................27200.2550000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
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droSim2
ATG-----------------------------------------------------C-----CCCTTTTTC-------CTATT------TTTGATCTTAGCTTTGAATTCTTTTACCACCATACTATCCGGCCAAAAATC-ACCCGAACATATGGTCGAAAAGAGCTTGTTTGGGACAGTTATCTTGAAAGATGA--TGTCCCTAGCGTAAGAGAAGTTAAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................AAAGATGA--TGTCCCTAGCGTAAGAGA........261230.002300000008010661225010000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGAAAAGA...........................................................281966.5312640000003695871052030000000
...........................................................................................................................................................................................AAAGATGA--TGTCCCTAGCGTAAGA..........24154.00540000002218257000000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGAAAAG............................................................272047.859570000003203191171970040000
...........................................................................................................................................................................................AAAGATGA--TGTCCCTAGCGTAAGAG.........25123.0023000000000023000000
........................................................................................................................................................TGGTCGAAAAGAGCTTGTTTGGGACAGT...........................................28122.0022000000105340000000
.................................................................................................TAGCTTTGAATTCTTTTACCACCA......................................................................................................24114.001400000026330000000
......................................................................................................................................................TATGGTCGAAAAGAGCTTGTTTGGGA...............................................26112.001200010021026000000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGAAAA.............................................................262010.1520300000066810560000000
......................................................................................................................................................TATGGTCGAAAAGAGCTTGTTTGGG................................................2519.00900000010008000000
...........................................................................................................................................................................................AAAGATGA--TGTCCCTAGCGTAAGAGAA.......2719.00900000016002000000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGAAAAGAGC.........................................................30197.1613600000051483430000000
......................................................................................................................................................TATGGTCGAAAAGAGCTTGTTTGG.................................................2416.00600010000004100000
......................................................................................................................................................TATGGTCGAAAAGAGCTTGTTTGGGAC..............................................2716.00600000012102000000
.................................................................................................TAGCTTTGAATTCTTTTACCACCATAC...................................................................................................2715.00500000004010000000
.........................................................................................................................TACTATCCGGCCAAAAATC-..................................................................................19204.1082000082000000000000
....................................................................TTC-------CTATT------TTTGATCTTAGCTTTGAA....................................................................................................................2614.00400000001120000000
............................................................................................................................................................................................AAGATGA--TGTCCCTAGCGTAAGAGA........2514.00400000012001000000
.................................................................................................................TACCACCATACTATCCGGCCAAAAA.....................................................................................25203.8076000068022310000000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCC..............................................................................23203.7575000407100000000000
...........................................................................................................................CTATCCGGCCAAAAATC-ACCC..............................................................................21203.6072000072000000000000
..........................................................................................................................................TC-ACCCGAACATATGGTCGAAAAGAGC.........................................................27203.6072002000103181326000000
.....................................................................................................................ACCATACTATCCGGCCAAAAATC-ACC...............................................................................26203.4569000006900000000000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCGAA...........................................................................26203.306600132400281090000000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGAAA..............................................................25203.15630000000020380050000
.........................................................................................................................................................................................TGAAAGATGA--TGTCCCTAGCGTAAGA..........2613.00300000012000000000
......................................................................................................................................................TATGGTCGAAAAGAGCTTGTTTG..................................................2313.00300000000003000000
..................................................................................................................................................AACATATGGTCGAAAAGAG..........................................................19203.0060000060000000000000
...........................................................................................TGATCTTAGCTTTGAATTCTTTTACC..........................................................................................................2613.00300020000000010000
...............................................................................................................................................................................................ATGA--TGTCCCTAGCGTAAGAG.........2113.00300000000003000000
...........................................................................................................................................................TCGAAAAGAGCTTGTTTGGGACAGT...........................................2513.00300000000000030000
............................................................................................................................TATCCGGCCAAAAATC-ACCCGAACATA.......................................................................27202.35470000001350290000000
.......................................................................................................................................................ATGGTCGAAAAGAGCTTGTTTGGGACAGT...........................................2912.00200000011000000000
....................................................................TTC-------CTATT------TTTGATCTTAGCTTTGAAT...................................................................................................................2712.00200000020000000000
.................................................................................................TAGCTTTGAATTCTTTTACCACCATACTA.................................................................................................2912.00200000011000000000
....................................................................................................................................................................GCTTGTTTGGGACAGTTATCTTGAAAGA...............................2812.00200000001100000000
...........................................................................................................................................................................................AAAGATGA--TGTCCCTAGCGTAA............2212.00200000000002000000
...........................................................................................................................................................TCGAAAAGAGCTTGTTTGGGACAGTT..........................................2612.00200000001001000000
.......................................................................................................................................................................TGTTTGGGACAGTTATCTTGAAAGAT..............................2612.00200000011000000000
................................................................................................TTAGCTTTGAATTCTTTTACCACCATAC...................................................................................................2812.00200000000200000000
........................................................................................................................................................................................TTGAAAGATGA--TGTCCCTAGCGTAAGA..........2712.00200000010010000000
.....................................................................TC-------CTATT------TTTGATCTTAGCTTTGAA....................................................................................................................2512.00200000010010000000
......................................................................................................................................................TATGGTCGAAAAGAGCTTGTTTGGGACAGT...........................................3012.00200000020000000000
....................................................................................................................................................................................TATCTTGAAAGATGA--TGTCCCTAGCGTA.............2812.00200000000002000000
...................................................................................................................................................................AGCTTGTTTGGGACAGTTATCTTGAA..................................2612.00200000020000000000
........................................................................................................................................................TGGTCGAAAAGAGCTTGTTTGGGACAG............................................2712.00200000002000000000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGAAAAGAG..........................................................29192.0038000000723440000000
...........................................................................................................................................................................................AAAGATGA--TGTCCCTAGCGTAAGAGT........2612.00200000011000000000
...........................................................................................................................................................................................AAAGATGA--TGTCCCTAGCGTAAG...........2312.00200010000001000000
...........................................................................................TGATCTTAGCTTTGAATTCTTTTACCACCA......................................................................................................3012.00200000002000000000
...........................................................................................................................................................................TGGGACAGTTATCTTGAAAGATGA--TG........................2612.00200000001100000000
......................................................................................................................................................................TTGTTTGGGACAGTTATCTTGAAAGA...............................2612.00200000010010000000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCGAACA.........................................................................28201.85370000000140220010000
.............................................................................................................................................ACCCGAACATATGGTCGAAAAGAGC.........................................................25201.8537002000415421000000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGA................................................................23201.7535000000135890000000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCGA............................................................................25201.352700080047052100000
......................................................................................................................................................TATGGTCGAAAAGAGC.........................................................16201.3026000000001025000000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGAA...............................................................24201.252500000009960010000
.....................................................................................................................................................................................................TGTCCCTAGCGTAAGAGAAGTTAAAT26201.2024000000138102000000
.........................................................................................................................................................................................TGAAAGATGA--TGTCCCTAGCGTAAGAGA........2811.00100000010000000000
...........................................................................................TGATCTTAGCTTTGAATTCTTTTAA...........................................................................................................2511.00100000000000010000
..................................................................................T------TTTGATCTTAGCTTTGAATTCTTT..............................................................................................................2511.00100000010000000000
................................................................................................................................................................................................TGA--TGTCCCTAGCGTAAGAGAAGTT....2511.00100000001000000000
.TG-----------------------------------------------------C-----CCCTTTTTC-------CTATT------TTTGATC...............................................................................................................................2411.00100000010000000000
......................................................................................................................................................TATGGTCGAAAAGAGCTTGT.....................................................2011.00100000000001000000
.........................................................................................TTTGATCTTAGCTTTGAATTCTTTCT............................................................................................................2611.00100000000100000000
....................................................................................................................................................CATATGGTCGAAAAGAGCTTGTTTGGGAC..............................................2911.00100000000010000000
.....................................................................................................TTTGAATTCTTTTACCACCATACTATCCGGC...........................................................................................3111.00100000001000000000
....................................................................TTC-------CTATT------TTTGATCTTAGCTTTGA.....................................................................................................................2511.00100000010000000000
......................................................................................................................................................TATGGTCGAAAAGAGCTTGTTTGGGACA.............................................2811.00100000001000000000
....................................................................................................................................................CATATGGTCGAAAAGAGCTTGTTTGGG................................................2711.00100000000010000000
.................................................................................................................................................................................................GA--TGTCCCTAGCGTAAGAGAAGTTAAAT2811.00100000001000000000
...........................................................................................................................................................TCGAAAAGAGCTTGTTTGGGACAGTTAA........................................2811.00100000010000000000
...........................................................................................TGATCTTAGCTTTGAATTCT................................................................................................................2011.00100000000001000000
.................................................................................................................................................................................................GA--TGTCCCTAGCGTAAGAG.........1911.00100000000001000000
.................................................................................................TAGCTTTGAATTCTTTTACCACCATA....................................................................................................2611.00100000001000000000
...........................................................................................................................................................TCGAAAAGAGCTTGTTTGGGACA.............................................2311.00100000000001000000
...................................................................................................................................................................AGCTTGTTTGGGACAGTTATCTTGAAAGA...............................2911.00100000010000000000
....................................................................................................................................................................................TATCTTGAAAGATGA--TGTCCCTAGC................2511.00100010000000000000
........................................................................................................................................................TGGTCGAAAAGAGCTTGTTTGGG................................................2311.00100000000000100000
...........................................................................................TGATCTTAGCTTTGAA....................................................................................................................1611.00100000000001000000
......................................................................................................................................................................TTGTTTGGGACAGTTATCTTGAAAGAT..............................2711.00100000010000000000
..........................................................................................................................................................GTCGAAAAGAGCTTGTTTGGGACAGTTA.........................................2811.00100010000000000000
.................................................................................................................................................................................................GA--TGTCCCTAGCGTAAGAGA........2011.00100000001000000000
.........................................................................................TTTGATCTTAGCTTTGAATTCTTT..............................................................................................................2411.00100000000100000000
...........................................................................................................................................................TCGAAAAGAGCTTGTTTGGGACAGTTATC.......................................2911.00100000010000000000
....................................................................................................................................................................................TATCTTGAAAGATGA--TGTCCCTAGCG...............2611.00100000000001000000
.......................................................................................................................................................ATGGTCGAAAAGAGCTTGTTTGGGA...............................................2511.00100010000000000000
...........................................................................................................................................................................................AAAGATGA--TGTCCCTAGCGTA.............2111.00100000000001000000
.......................................................................................................................................................................TGTTTGGGACAGTTATCTTGAAAGA...............................2511.00100000001000000000
........................................................................................................................................................TGGTCGAAAAGAGCTTGTTTGGGACAA............................................2721.00200000000020000000
................................................................................................................................................................................................TGA--TGTCCCTAGCGTAAGAG.........2011.00100000000001000000
...........................................................................................................................................................................................AAAGATGA--TGTCCCTAGCGTAAGAGAAG......2811.00100000010000000000
.........................................................................................................................................................GGTCGAAAAGAGCTTGTTTG..................................................2011.00100000000001000000
...........................................................................................................................................................TCGAAAAGAGCTTGTTTGGGAC..............................................2211.00100000000001000000
...............................................................................................................................................................AAAGAGCTTGTTTGGGACAGTTATC.......................................2511.00100000000100000000
.........................................................................................TTTGATCTTAGCTTTGAATTCTTTT.............................................................................................................2511.00100000010000000000
........................................................................................................................................................................................TTGAAAGATGA--TGTCCCTAGCGTAAG...........2611.00100000000001000000
.......................................................................................................................................................................TGTTTGGGACAGTTATCTTGAAAGAA..............................2611.00100000001000000000
....................................................................................................................................................................GCTTGTTTGGGACAGTTATCTTGAA..................................2511.00100000001000000000
...........................................................................................TGATCTTAGCTTTGAATTCTTTTACCATT.......................................................................................................2911.00100010000000000000
......................................................................................................................................................................................TCTTGAAAGATGA--TGTCCCTAGCGTAAGA..........2911.00100000000010000000
.................................................................................................TAGCTTTGAATTCTTTTACCACC.......................................................................................................2311.00100000000010000000
...............................................................................................................................................................................................ATGA--TGTCCCTAGCGTAAGA..........2011.00100000000001000000
..................................................................TTTTC-------CTATT------TTTGATCTTAGCTTTGAA....................................................................................................................2811.00100000001000000000
....................................................................................................................................................................................TATCTTGAAAGATGA--TGTCCCTA..................2311.00100001000000000000
....................................................................................................................................................................................TATCTTGAAAGATGA--TGTCCCTAGCGT..............2711.00100000000001000000
................................................................................................................................................................................................TGA--TGTCCCTAGCGTAAGA..........1911.00100000000001000000
........................................................................................................................................................TGGTCGAAAAGAGCTTGTTTGGGAC..............................................2511.00100000010000000000
.....................................................................................................TTTGAATTCTTTTACCACCATACTATC...............................................................................................2711.00100000000010000000
..........................................................................................................................................................................................GAAAGATGA--TGTCCCTAGCGTAAGAGA........2711.00100000001000000000
.................................................................................................................................................................AGAGCTTGTTTGGGACAGTTATCTTGAA..................................2811.00100000001000000000
.TG-----------------------------------------------------C-----CCCTTTTTC-------CTATT------TTTGATCTTAGC..........................................................................................................................2911.00100000000010000000
.........................................................................................TTTGATCTTAGCTTTGAATTCTT...............................................................................................................2311.00100000010000000000
....................................................................................................................................................................GCTTGTTTGGGACAGTTATCTTGAT..................................2511.00100000001000000000
...........................................................................................................................................................................................AAAGATGA--TGTCCCTAGCGT..............2011.00100000000001000000
......................................................................................................................................................................TTGTTTGGGACAGTTATCTTGAAAGATG.............................2811.00100000001000000000
............................................................................................................................TATCCGGCCAAAAATC-ACCCGAACA.........................................................................25200.9519000200402110000000
.....................................................................................................................................................................................................TGTCCCTAGCGTAAGAGAAGTTAAA.25200.9519000000315100000000
..............................................................................................................................TCCGGCCAAAAATC-ACCCGAACATATGG....................................................................28200.901800000090540000000
................................................................................................................................CGGCCAAAAATC-ACCCGAACATATGGT...................................................................27200.9018000000261000000000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCGAAC..........................................................................27200.851700690000011000000
..............................................................................................................................TCCGGCCAAAAATC-ACCCGAACATATGGT...................................................................29200.701400000055400000000
...............................................................................................................................CCGGCCAAAAATC-ACCCGAACATATGGT...................................................................28200.651300000036130000000
...........................................................................................................................................................................TGGGACAGTTATCTTG....................................16200.601200000030009000000
....................................................................................................................CACCATACTATCCGGCCAAAAATC-ACC...............................................................................27200.551100050000002040000
.......................................................................................................................................................................TGTTTGGGACAGTTATCTTGAAATT...............................2520.50100000001000000000
......................................................................................................................................................TATGGTCGAAAAGAGCTTGTTTGGTT...............................................2620.50100000000001000000
......................................................................................................................................................................TTGTTTGGGACAGTTATCTTGTGT.................................2420.50100000000100000000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCG.............................................................................24200.45900060000003000000
..............................................................................................................................TCCGGCCAAAAATC-ACCCGAACATATG.....................................................................27200.40800000011060000000
................................................................................................................................CGGCCAAAAATC-ACCCGAACATATGG....................................................................26200.40800000043100000000
...........................................................................................................................................................................TGGGACAGTTATCTTGAAAGATGA--T.........................25200.35700000021121000000
..........................................................................................................................................TC-ACCCGAACATATGGTCGAAAAGAGCT........................................................28200.35700000061000000000
...........................................................................................................................................................................TGGGACAGTTATCTTGAAAGATGA--..........................24200.35700000000103030000
..........................................................................................................................ACTATCCGGCCAAAAATC-ACCCGAACA.........................................................................27200.35700060000010000000
................................................................CTTTTTC-------CTATT------TTTGATCTTAGCTT........................................................................................................................2630.33100000000010000000
.....................................................................TC-------CTATT------TTTGATCTTAGCTT........................................................................................................................2160.33200000000200000000
.........................................................................................................................................ATC-ACCCGAACATATGGTCGAAAAGAGC.........................................................28200.30600100021002000000
...........................................................................................................................................C-ACCCGAACATATGGTCGAAAAGAGC.........................................................26200.30600000002202000000
..........................................................................................................................................TC-ACCCGAACATATGGTCGAAAAGAG..........................................................26200.30600000002031000000
........................................................................................................................................AATC-ACCCGAACATATGGTCGAAAAGA...........................................................27190.26500000000140000000
......................................................................................................................................AAAATC-ACCCGAACATATGGTCGAAAAGA...........................................................29190.26500000003200000000
.....................................................................................................................................................ATATGGTCGAAAAGAGC.........................................................17200.25500000001004000000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCGAACATA.......................................................................30200.25500000050000000000
...........................................................................................................................................C-ACCCGAACATATGGTCGAAAAGA...........................................................24200.25500000020300000000
.................................................................................................................................................................................AGTTATCTTGAAAGA...............................15200.25500000021110000000
......................................................................................................................................................TATGGTCGAAAAGAG..........................................................15200.25500000000104000000
..........................................................................................................................................TC-ACCCGAACATATGGTCGAAAAGA...........................................................25200.25500000031100000000
..........................................................................................................................ACTATCCGGCCAAAAATC-ACCCGAAC..........................................................................26200.20400040000000000000
................................................................................................................................CGGCCAAAAATC-ACCCGAACATATG.....................................................................25200.20400000003010000000
...................................................................................................................................................................................TTATCTTGAAAGATGA--..........................16200.20400000003100000000
....................................................................................................................................................................................TATCTTGAAAGATGA--..........................15200.20400000000004000000
.........................................................................................................................................................................TTTGGGACAGTTATCTTGAAAGATGA--..........................26200.20400000000012010000
............................................................................................................TCTTTTACCACCATACTATCCGGC...........................................................................................24200.20400000022000000000
..............................................................................................................................................CCCGAACATATGGTCGAAAAGAGC.........................................................24200.20400000001003000000
.......................................................................................................................CATACTATCCGGCCAAAAATC-ACCCGAA...........................................................................28200.20400000022000000000
....................................................................................................................CACCATACTATCCGGCCAAAAATC-ACCC..............................................................................28200.20400110000000020000
...................................................................TTTC-------CTATT------TTTGATCTTAGCTT........................................................................................................................2360.17100000001000000000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGAAAAGAGCT........................................................31190.16300000030000000000
............................................................................................................................TATCCGGCCAAAAATC-ACCCGAACATATG.....................................................................29200.15300000011010000000
..........................................................................................................................................................................TTGGGACAGTTATCTTG....................................17200.15300000000003000000
......................................................................................................................................................................................................GTCCCTAGCGTAAGAG.........16200.15300000000003000000
...................................................................................................................................CCAAAAATC-ACCCGAACATATGGTC..................................................................25200.15300000000000012000
........................................................................................................................................................................GTTTGGGACAGTTATCTTGAAAGA...............................24200.15300000001101000000
..........................................................................................................................................TC-ACCCGAACATATGGTCGAAAAG............................................................24200.15300010002000000000
...........................................................................................................................................................................TGGGACAGTTATCTTGAAAG................................20200.15300000012000000000
......................................................................................................................................AAAATC-ACCCGAACATATGGTCGAAAA.............................................................27200.15300000020000010000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGAAAAGAA..........................................................29200.15300000021000000000
..................................................................................................................................................................................................A--TGTCCCTAGCGTAAGA..........17200.15300000001002000000
.................................................................................................................................................GAACATATGGTCGAAAAGAGC.........................................................21200.15300000000003000000
..............................................................................................................................TCCGGCCAAAAATC-ACCCGAACATATGGTC..................................................................30200.15300000003000000000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCGAACAT........................................................................29200.15300030000000000000
.................................................................................................................TACCACCATACTATCCGGCCAA........................................................................................22200.10200000000000020000
...........................................................................................................................CTATCCGGCCAAAAATC-ACCCGAACA.........................................................................26200.10200000010010000000
........................................................................................................................................................................................................CCCTAGCGTAAGAGA........15200.10200000000011000000
...........................................................................................................................................C-ACCCGAACATATGGTCGAAAAGAGCT........................................................27200.10200010010000000000
.......................................................................................................................CATACTATCCGGCCAAAAATC-ACCCGA............................................................................27200.10200000002000000000
....................................................................................................................................................CATATGGTCGAAAAG............................................................15200.10200000000110000000
.................................................................................................................TACCACCATACTATCCGGCCA.........................................................................................21200.10200000000000020000
.......................................................................................................................................AAATC-ACCCGAACATATGGTCGAAAT.............................................................26200.10200000011000000000
....................................................................................................................CACCATACTATCCGGCCAAAAATC-ACCCGA............................................................................30200.10200000010100000000
....................................................................................................................CACCATACTATCCGGCCAA........................................................................................19200.10200000000000020000
............................................................................................................TCTTTTACCACCATACTATCCGG............................................................................................23200.10200000011000000000
..................................................................................................................................................AACATATGGTCGAAAAGA...........................................................18200.10200000002000000000
..................................................................................................................................................AACATATGGTCGAAAAGAGC.........................................................20200.10200000000011000000
.........................................................................................................................................................................TTTGGGACAGTTATCTTGAAAGA...............................23200.10200000000101000000
......................................................................................................................CCATACTATCCGGCCAAAAAT....................................................................................21200.10200010001000000000
.......................................................................................................................CATACTATCCGGCCAA........................................................................................16200.10200000002000000000
............................................................................................................................TATCCGGCCAAAAATC-ACCCGAACAT........................................................................26200.10200000000200000000
..........................................................................................................................................................................TTGGGACAGTTATCTTGAAAGATGA--..........................25200.10200000000002000000
...............................................................................................................TTTACCACCATACTATCCGGC...........................................................................................21200.10200000010100000000
..................................................................................................................................................AACATATGGTCGAAAAG............................................................17200.10200000001100000000
............................................................................................................................TATCCGGCCAAAAATC-ACC...............................................................................19200.10200000000020000000
...................................................................................................................................CCAAAAATC-ACCCGAACATATGGTCGA................................................................27200.10200000000000002000
..............................................................................................................TTTTACCACCATACTATCCGGC...........................................................................................22200.10200000011000000000
....................................................................................................................CACCATACTATCCGGCCAAAAATC-AC................................................................................26200.10200000000000020000
............................................................................................................................TATCCGGCCAAAAATC-ACCCGAA...........................................................................23200.10200000000020000000
.....................................................................................................................................................................................................TGTCCCTAGCGTAAG...........15200.10200000000002000000
...................................................................................................................................................ACATATGGTCGAAAAGAGC.........................................................19200.10200000000002000000
droSec2
AAG--ATGAAGAGGCGGA---------------------------TG-----------------GTTTTTC-------TTATT------TTTGATCTTAGCTTCAAACTCTTTTACCACCATACTATCCGGCCAAAAATC-ACCCGAACATATGGTCGAAAAGAGCTCGTTTGGGACAGTTATCTTAAAAGATAATATGTCCCTAGCATAAGAGAAGTTAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................TGATCTTAGCTTCAAACTCTTTTAC...........................................................................................................25207.55151151000
......................................................................................................................................................TATGGTCGAAAAGAGCTCGTTTGG.................................................24207.051413101100
...........................................................................................TGATCTTAGCTTCAAACTCTTTTACC..........................................................................................................26202.605200520
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCGAA...........................................................................26202.004040000
...........................................................................................TGATCTTAGCTTCAAACTCTTTTACCA.........................................................................................................27200.801616000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCG.............................................................................24200.601200120
...........................................................................................TGATCTTAGCTTCAAACTCTTTTACCACC.......................................................................................................29200.551111000
......................................................................................................................................................TATGGTCGAAAAGAGCTCGTTTGGG................................................25200.551100011
......................................................................................................................................................TATGGTCGAAAAGAGCTCGTTTG..................................................23200.50109001
............................................................................................GATCTTAGCTTCAAACTCTTTTAC...........................................................................................................24200.4598010
....................................................................................................................CACCATACTATCCGGCCAAAAATC-ACC...............................................................................27200.3577000
.............................................................................................ATCTTAGCTTCAAACTCTTTTACCACCA......................................................................................................28200.3570070
......................................................................................................................................................TATGGTCGAAAAGAGCTCGTTTGGGA...............................................26200.3060600
......................................................................................................................................................TATGGTCGAAAAGAGCTCGTTTGGGAC..............................................27200.3060006
........................................................................................................................................................TGGTCGAAAAGAGCTCGTTTGG.................................................22200.2555000
............................................................................................................................TATCCGGCCAAAAATC-ACCCGAACATA.......................................................................27200.2555000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCGAACAT........................................................................29200.2044000
........................................................................................................................................................TGGTCGAAAAGAGCTCGTTTGGGACAGT...........................................28200.2044000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCGAACA.........................................................................28200.2040040
......................................................................................................................................................TATGGTCGAAAAGAGCTCGTTTGGGACA.............................................28200.1533000
....................................................................................................................................................CATATGGTCGAAAAGAGCTCGTTTGGG................................................27200.1530030
.........................................................................................................................................ATC-ACCCGAACATATGGTCGAAAAGAGC.........................................................28200.1530030
...............................................................................................CTTAGCTTCAAACTCTTTTAC...........................................................................................................21200.1532010
..........................................................................................................................ACTATCCGGCCAAAAATC-ACCCGAACA.........................................................................27200.1533000
..........................................................................................................................ACTATCCGGCCAAAAATC-ACCCG.............................................................................23200.1533000
............................................................................................................................TATCCGGCCAAAAATC-ACCCGAACA.........................................................................25200.1533000
......................................................................................................................................................TATGGTCGAAAAGAGCTCGTTTGGGT...............................................26200.1020002
........................................................................................................................................................TGGTCGAAAAGAGCTCGTTTGGA................................................23200.1022000
.............................................................................................ATCTTAGCTTCAAACTCTTTTA............................................................................................................22200.1021010
.....................................................................................................................................................ATATGGTCGAAAAGAGCTCGTTTGGG................................................26200.1021010
.......................................................................................................................................................ATGGTCGAAAAGAGCTCGTTTGGGA...............................................25200.1022000
..............................................................................................TCTTAGCTTCAAACTCTTTTACCA.........................................................................................................24200.1022000
....................................................................................................................................................CATATGGTCGAAAAGAGCTCGTTT...................................................24200.1020011
...............................................................................................CTTAGCTTCAAACTCTTTTACCACCA......................................................................................................26200.1022000
..........................................................................................TTGATCTTAGCTTCAAACTCTTTTA............................................................................................................25200.0511000
.........................................................................................................................................................GGTCGAAAAGAGCTCGTTTGGG................................................22200.0511000
...........................................................................................................................................................TCGAAAAGAGCTCGTTTGGGACT.............................................23200.0510010
...................................................................................................................................................ACATATGGTCGAAAAGAGCTCGTTTTT.................................................27200.0510100
...........................................................................................TGATCTTAGCTTCAAACTCTTT..............................................................................................................22200.0511000
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCCGA............................................................................25200.0510001
.........................................................................................................................TACTATCCGGCCAAAAATC-ACCC..............................................................................23200.0510010
...................................................................................................................................................ACATATGGTCGAAAAGAGCTCGTTTGG.................................................27200.0511000
....................................................................................................................CACCATACTATCCGGCCAAAAATC-ACCC..............................................................................28200.0511000
....................................................................................................................................................CATATGGTCGAAAAGAGCTCGTTTGG.................................................26200.0510001
..........................................................................................................................ACTATCCGGCCAAAAATC-ACCCGAACAT........................................................................28200.0511000
.........................................................................................TTTGATCTTAGCTTCAAACTCTTTTAC...........................................................................................................27200.0510010
.......................................................................................................................................................ATGGTCGAAAAGAGCTCGTTTGGGG...............................................25200.0511000
..........................................................................................................................ACTATCCGGCCAAAAATC-ACCCGAAC..........................................................................26200.0511000
........................................................................................................................................................TGGTCGAAAAGAGCTCGTTTGGGAC..............................................25200.0511000
...........................................................................................TGATCTTAGCTTCAAACTCTTTTATT..........................................................................................................26200.0511000
.......................................................................................................................................................ATGGTCGAAAAGAGCTCGTT....................................................20200.0511000
......................................................................................................................CCATACTATCCGGCCAAAAATC-ACC...............................................................................25200.0511000
...........................................................................................TGATCTTAGCTTCAAACTCTTTT.............................................................................................................23200.0510001
.....................................................................................................................ACCATACTATCCGGCCAAAAATC-ACCCGA............................................................................29200.0511000
...................................................................................................................................................ACATATGGTCGAAAAGAGCTCGTT....................................................24200.0510010
...........................................................................................................................................................TCGAAAAGAGCTCGTTTGGT................................................20200.0511000
...................................................................................................................................................ACATATGGTCGAAAAGAGCTCGTTTGGG................................................28200.0511000
...............................................................................TATT------TTTGATCTTAGCTTCAAACTC.................................................................................................................25200.0510010
droYak3
ATC--AGGCC-------------------ACGTGCGGGA-AGTTTATTCCCACGGGC-----CCTTTTTTT-------CTATC------TTTAATCTTAGCTTCGAACTCTTTCACCACCAAACTATTTGGCCAAAAAT------------AAGGTCGAGAATAGCTCATAAGGGACAGTTATCTTGAAGGATGAGATGTCCTAAGCGTAAAAAGAATTAAATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................T------------AAGGTCGAGAATAGCTCATAAGGGA...............................................2611.00101000000000
..............................................................................................TCTTAGCTTCGAACTCTTTCACCAC........................................................................................................2530.33101000000000
droEre2
AAG--AGGAGGTA---GTGGTC--TGGCCACGTGATGTAAGTTTAATTCCCACTGGC-----CCTGTTTTC-------CC--------------------ATTCGAACTCTTTCGCTACCTTACTATCTGGCCAAAAATC-AGCAGAACATATAGTCGAAAACAGCTTATTAGGTACAGTTGTCTTGAAAGATGAAATGTCCCTAGCGTAAGAAAAATTAAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/15/2015 at 03:14 PM