ID:

dps_2269

 Coordinate:

Unknown_group_839:2710-2860 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.6 -22.4 -22.3

Flybase annnotation

CDS [Dpse\GA27759-cds]; exon [dpse_GLEANR_6881:1]; intron [Dpse\GA27759-in]

No Repeatable elements found

mature
  1. dps_2269  Unknown_group_839:2715-2740 +
  2. dps_2849  XL_group3a:1529898-1529923 -
  3. Unknown_singleton_2913:4176-4201 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GACTCCATGTGTGTTATGTCGACTCAACCCAATTCCGCTGAGCATATTAAGTAAGTAAGTAGCAAAAGTCCGAATTTGAAAGACGTTGCTGCTGCTTTGCACATTCTTACACAGAAGGTTGATAAGCTACAACACAACATCCCTAAAAAGCCCAAGGTTTCCCATGGCACGAACGTAGATGATAATGGCAACAAGGCATCCCTGTGTTACTACCACAGTACTTTTGGGGATCGCGCACGCAAGTAACGGCC
*******************************************************..((((((((..(((...........))).))))))))((((..((..((((.....))))...))..))))..........((((..........(((.((....)).)))..........))))********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 V112
male body		 SRR902012
CNS imaginal disc
 GSM343916
embryo
 M022
male body
.......................................................TAAGTAGCAAAAGTCCGAATTTGAAA.......................................................................................................................................................................... 26 0 3 10.00 30 28 1 0 1 0 0 0
....................................................................TCCGAATTTGAAAGACGTTGCTGC............................................................................................................................................................... 24 0 3 8.00 24 11 13 0 0 0 0 0
....CCATGTGTGTTATGTCGACTCAACC.............................................................................................................................................................................................................................. 25 0 4 4.75 19 16 2 1 0 0 0 0
....CCATGTGTGTTATGTCGACTCAACCCAA........................................................................................................................................................................................................................... 28 0 4 3.75 15 13 2 0 0 0 0 0
.....CATGTGTGTTATGTCGACTCAACCCAA........................................................................................................................................................................................................................... 27 0 6 3.00 18 15 2 1 0 0 0 0
...........................................................TAGCAAAAGTCCGAATTTGAAAGACGT..................................................................................................................................................................... 27 0 3 2.67 8 0 8 0 0 0 0 0
...........................................................TAGCAAAAGTCCGAATTTGAAAGACG...................................................................................................................................................................... 26 0 3 2.67 8 5 3 0 0 0 0 0
.....CATGTGTGTTATGTCGACTCAACC.............................................................................................................................................................................................................................. 24 0 6 2.67 16 16 0 0 0 0 0 0
.......................................................TAAGTAGCAAAAGTCCGAATTTGAA........................................................................................................................................................................... 25 0 3 2.33 7 7 0 0 0 0 0 0
....................................................................TCCGAATTTGAAAGACGTTGCTGCT.............................................................................................................................................................. 25 0 3 2.00 6 3 3 0 0 0 0 0
.............................................................................................................................................................TTTCCCATGGCACGAACGTAGATG...................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0
.....CATGTGTGTTATGTCGACTCAACCCAAT.......................................................................................................................................................................................................................... 28 0 6 1.83 11 11 0 0 0 0 0 0
.....CATGTGTGTTATGTCGACTCAACCC............................................................................................................................................................................................................................. 25 0 6 1.83 11 11 0 0 0 0 0 0
....CCATGTGTGTTATGTCGACTCAACCC............................................................................................................................................................................................................................. 26 0 4 1.75 7 7 0 0 0 0 0 0
.......................................................TAAGTAGCAAAAGTCCGAATTTGAAAA......................................................................................................................................................................... 27 1 3 1.67 5 1 3 0 1 0 0 0
.........TGTGTTATGTCGACTCAACCCAATTC........................................................................................................................................................................................................................ 26 0 6 1.50 9 4 4 1 0 0 0 0
....CCATGTGTGTTATGTCGACTCAAC............................................................................................................................................................................................................................... 24 0 4 1.50 6 6 0 0 0 0 0 0
...........................................................................TTGAAAGACGTTGCTGCTGCTTTG........................................................................................................................................................ 24 0 5 1.40 7 7 0 0 0 0 0 0
............................................................................TGAAAGACGTTGCTGCTGCTT.......................................................................................................................................................... 21 0 5 1.40 7 5 1 0 1 0 0 0
..............TATGTCGACTCAACCCAATTCCGC..................................................................................................................................................................................................................... 24 0 6 1.33 8 6 2 0 0 0 0 0
...................................................................GTCCGAGTTTGAAAGATG...................................................................................................................................................................... 18 2 3 1.33 4 4 0 0 0 0 0 0
...................................................................GTCCGAACTTGAAAGATG...................................................................................................................................................................... 18 2 3 1.33 4 4 0 0 0 0 0 0
....................................................................TCCGAATTTGAAAGACGTTGCTG................................................................................................................................................................ 23 0 3 1.33 4 4 0 0 0 0 0 0
.....CATGTGTGTTATGTCGACTCAACCCA............................................................................................................................................................................................................................ 26 0 6 1.33 8 8 0 0 0 0 0 0
.......................................................................................................................TGATAAGCTACAACACAACATCCC............................................................................................................ 24 0 4 1.25 5 4 0 0 0 0 1 0
....CCATGTGTGTTATGTCGACTCAACCCAAT.......................................................................................................................................................................................................................... 29 0 4 1.25 5 5 0 0 0 0 0 0
...........................................................................TTGAAAGACGTTGCTGCTGCTTT......................................................................................................................................................... 23 0 5 1.20 6 6 0 0 0 0 0 0
.....CATGTGTGTTATGTCGACTCAAC............................................................................................................................................................................................................................... 23 0 6 1.17 7 7 0 0 0 0 0 0
.......................................................TAAGTAGCAAAAGTCCGAATTTGA............................................................................................................................................................................ 24 0 3 1.00 3 3 0 0 0 0 0 0
...............................................TAAGTAAGTAAGTAGCAAAAGTCC.................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0
........................................................................................................................................................................ACGAACGTAGATGATAATGGC.............................................................. 21 0 2 1.00 2 0 0 0 0 2 0 0
..........................................................................................................................TAAGCTACAACACAACATCCCTAAA........................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................GCCCAAGGTTTCCCATGGCACGAACG............................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................TCCGAATTTGAAAGACGTTGCTGCTG............................................................................................................................................................. 26 0 3 1.00 3 3 0 0 0 0 0 0
............................................................................................TGCTTTGCACATTCTTACACAGAAGGT.................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................TAAGCTACAACACAACATCCCTAAAAAG..................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................ACTTTTGGGGATCGCGCACGC........... 21 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................TGAAAGACGTTGCTGCTGCTTTGCAC..................................................................................................................................................... 26 0 5 0.80 4 3 0 1 0 0 0 0
............................................................................TGAAAGACGTTGCTGCTGC............................................................................................................................................................ 19 0 5 0.80 4 4 0 0 0 0 0 0
....CCATGTGTGTTATGTCGACTCAACCCA............................................................................................................................................................................................................................ 27 0 4 0.75 3 2 1 0 0 0 0 0
.....................................................................CCGAATTTGAAAGACGTTGCTGC............................................................................................................................................................... 23 0 4 0.75 3 3 0 0 0 0 0 0
..........................................................................................................................TAAGCTACAACACAACATCCC............................................................................................................ 21 0 4 0.75 3 3 0 0 0 0 0 0
.......................................................TAAGTAGCAAAAGTCCGAATT............................................................................................................................................................................... 21 0 3 0.67 2 2 0 0 0 0 0 0
...........TGTTATGTCGACTCAACCCAATTCCGC..................................................................................................................................................................................................................... 27 0 6 0.67 4 1 3 0 0 0 0 0
.......................................................TAAGTAGCAAAAGTCCGAATTTGAAAGA........................................................................................................................................................................ 28 0 3 0.67 2 2 0 0 0 0 0 0
.......................................................TAAGTAGCAAAAGTCCGAATTTG............................................................................................................................................................................. 23 0 3 0.67 2 2 0 0 0 0 0 0
...............................................................AAAAGTCCGAATTTGAAAGACGT..................................................................................................................................................................... 23 0 3 0.67 2 2 0 0 0 0 0 0
.......................................................TAAGTAGCAAAAGTCCGAATTTGAAAG......................................................................................................................................................................... 27 0 3 0.67 2 2 0 0 0 0 0 0
...............................................................AAAAGTCCGAATTTGAAAGACGTTGC.................................................................................................................................................................. 26 0 3 0.67 2 2 0 0 0 0 0 0
.........................................................................................................................................................................CGAACGTAGATGATAATGGCAAC........................................................... 23 0 3 0.67 2 0 2 0 0 0 0 0
...........................................................................TTGAAAGACGTTGCTGCTGCTT.......................................................................................................................................................... 22 0 5 0.60 3 3 0 0 0 0 0 0
............................................................................TGAAAGACGTTGCTGCTGCT........................................................................................................................................................... 20 0 5 0.60 3 2 0 0 1 0 0 0
..............TATGTCGACTCAACCCAATTCCGCTG................................................................................................................................................................................................................... 26 0 5 0.60 3 3 0 0 0 0 0 0
..........................................................................TTTGAAAGACGTTGCTGCTG............................................................................................................................................................. 20 0 5 0.60 3 3 0 0 0 0 0 0
...........................................................................TTGAAAGACGTTGCTGCTGC............................................................................................................................................................ 20 0 5 0.60 3 2 0 0 0 0 1 0
.........TGTGTTATGTCGACTCAACCCAATTCCGC..................................................................................................................................................................................................................... 29 0 5 0.60 3 3 0 0 0 0 0 0
....CCATGTGTGTTATGTCGACTCA................................................................................................................................................................................................................................. 22 0 4 0.50 2 2 0 0 0 0 0 0
.......TGTGTGTTATGTCGACTCAACCCAAT.......................................................................................................................................................................................................................... 26 0 6 0.50 3 3 0 0 0 0 0 0
.....................................................................CCGAATTTGAAAGACGTTGCTGCTG............................................................................................................................................................. 25 0 4 0.50 2 2 0 0 0 0 0 0
.......................................................................................................................TGATAAGCTACAACACAACATCC............................................................................................................. 23 0 4 0.50 2 1 0 1 0 0 0 0
...................................................................GTCCGAACTTGAAAGATGG..................................................................................................................................................................... 19 3 18 0.44 8 8 0 0 0 0 0 0
...........................................................................TTGAAAGACGTTGCTGCTGCTTTGCAC..................................................................................................................................................... 27 0 5 0.40 2 2 0 0 0 0 0 0
..........................................................................TTTGAAAGACGTTGCTGCTGCTT.......................................................................................................................................................... 23 0 5 0.40 2 2 0 0 0 0 0 0
..................................................................GGTCCGAGTTTGAAAGATG...................................................................................................................................................................... 19 3 15 0.40 6 2 0 0 4 0 0 0
................TGTCGACTCAACCCAATTCCGCTGA.................................................................................................................................................................................................................. 25 0 5 0.40 2 1 1 0 0 0 0 0
................TGTCGACTCAACCCAATTCCGCT.................................................................................................................................................................................................................... 23 0 5 0.40 2 2 0 0 0 0 0 0
...................................................................GTCCGAGTTTGAAAGATGG..................................................................................................................................................................... 19 3 18 0.39 7 3 0 0 4 0 0 0
.......................................................TAAGTAGCAAAAGTCCGAATTT.............................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0
........................................................AAGTAGCAAAAGTCCGAATTTGAA........................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
...........................................................TAGCAAAAGTCCGAATTTGAAAGAC....................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
................................................................................................................AGAAGGTTGATAAGCTACAACACAACA................................................................................................................ 27 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................CTTAAGTAGCAAAAGTCCGAATTTGAAA.......................................................................................................................................................................... 28 2 3 0.33 1 1 0 0 0 0 0 0
.......TGTGTGTTATGTCGACTCAACC.............................................................................................................................................................................................................................. 22 0 6 0.33 2 2 0 0 0 0 0 0
.......................................................TAAGTAGCAAAAGTCCGAATTTGAAAGAC....................................................................................................................................................................... 29 0 3 0.33 1 0 0 1 0 0 0 0
.........TGTGTTATGTCGACTCAACCCAATTCC....................................................................................................................................................................................................................... 27 0 6 0.33 2 2 0 0 0 0 0 0
........................................................AAGTAGCAAAAGTCCGAATTTGAAAGA........................................................................................................................................................................ 27 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................TAATTAGCAAAAGTCCGAATTTG............................................................................................................................................................................. 23 1 3 0.33 1 1 0 0 0 0 0 0
..................................................................AGTCCGAATTTGAAAGACGTTGC.................................................................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0 0 0
.............TTATGTCGACTCAACCCAATTCCGC..................................................................................................................................................................................................................... 25 0 6 0.33 2 2 0 0 0 0 0 0
.........TGTGTTATGTCGACTCAACCCAATTCA....................................................................................................................................................................................................................... 27 1 6 0.33 2 2 0 0 0 0 0 0
........................................................AAGTAGCAAAAGTCCGAATTTGAAA.......................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
........................................................AAGTAGCAAAAGTCCGAATTTGA............................................................................................................................................................................ 23 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................AGTCCGAGTTTGAAAGATG...................................................................................................................................................................... 19 2 3 0.33 1 1 0 0 0 0 0 0
.......................................................TAAGTAGCAAAAGTCCGAA................................................................................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0 0 0
.......TGTGTGTTATGTCGACTCAACCCAA........................................................................................................................................................................................................................... 25 0 6 0.33 2 2 0 0 0 0 0 0
....................................................................TCCGAATTTGAAAGACGTTGCTGCTA............................................................................................................................................................. 26 1 3 0.33 1 1 0 0 0 0 0 0
...........................................................TAGCAAAAGTCCGAATTTGAAAGA........................................................................................................................................................................ 24 0 3 0.33 1 1 0 0 0 0 0 0
...............................................................................................................................................................................TAGATGATAATGGCAACAAGGCATCC.................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0
......................................................................................................................................................................................TAATGGCAACAAGGCATCCCTGTG............................................. 24 0 3 0.33 1 1 0 0 0 0 0 0
....................................................................TCCGAATTTGAAAGACGTTGCT................................................................................................................................................................. 22 0 3 0.33 1 0 0 1 0 0 0 0
.......................................................TAAGTAGCAAAAGCCCGAATTTAAAAGA........................................................................................................................................................................ 28 2 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................................CACAGAAGGTTGATAAGCTACAACA..................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................GTCCGAATTTGAAAGACGTTGCTGC............................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................................................................TGATAATGGCAACAAGGCATCCCT................................................ 24 0 3 0.33 1 1 0 0 0 0 0 0
................................................................AAAGTCCGAATTTGAAAGACGTTGCTG................................................................................................................................................................ 27 0 3 0.33 1 1 0 0 0 0 0 0
.........................................................AGTAGCAAAAGTCCGAATTTGAAA.......................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
....CCATGTGTGTTATGTCGACT................................................................................................................................................................................................................................... 20 0 4 0.25 1 1 0 0 0 0 0 0
....CCATGTGTGTTATGTCGACTCACCC.............................................................................................................................................................................................................................. 25 1 4 0.25 1 0 0 0 1 0 0 0
..........................................................................................................................TAAGCTACAACACAACATCCCAAAAAAGC.................................................................................................... 29 1 4 0.25 1 0 0 1 0 0 0 0
.....................................................................CCGAATTTGAAAGACGTTGCTGCTGCT........................................................................................................................................................... 27 0 4 0.25 1 0 0 0 0 0 0 1
...ACCATGTGTGTTATGTCGACTCAACCC............................................................................................................................................................................................................................. 27 1 4 0.25 1 1 0 0 0 0 0 0
....CGATGTGTGTTATGTCGACTCAACC.............................................................................................................................................................................................................................. 25 1 4 0.25 1 0 0 1 0 0 0 0
....CCATGTGTGTTATGTCGACTCAA................................................................................................................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0 0 0
..CTCCATGTGTGTTATGTCGACTCAACA.............................................................................................................................................................................................................................. 27 1 4 0.25 1 1 0 0 0 0 0 0
..........................................................................................................................TAAGCTACAACACAACATCCCAAAAA....................................................................................................... 26 1 4 0.25 1 0 0 1 0 0 0 0
...TCCATGTGTGTTATGTCGACTCAA................................................................................................................................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0 0 0
..........................................................................................................................TAAGCTACAACACAACATCC............................................................................................................. 20 0 4 0.25 1 0 0 1 0 0 0 0
....CAATGTGTGGTATGTCGACTCAACC.............................................................................................................................................................................................................................. 25 2 4 0.25 1 0 0 0 0 0 1 0
............................................................................TGAAAGACGTTGCTGCTGCTTC......................................................................................................................................................... 22 1 5 0.20 1 0 0 1 0 0 0 0
........................................................................AATTTGAAAGACGTTGCTGCT.............................................................................................................................................................. 21 0 5 0.20 1 1 0 0 0 0 0 0
..................................................................................ACGCTGCTCCTGCTTTGCAC..................................................................................................................................................... 20 2 5 0.20 1 1 0 0 0 0 0 0
............................................................................TGAAAGACGTTGCTGCTGCTC.......................................................................................................................................................... 21 1 5 0.20 1 0 0 1 0 0 0 0
...........................................................................TTGTAAGACGTTGCTGCTGCTT.......................................................................................................................................................... 22 1 5 0.20 1 0 0 1 0 0 0 0
............................................................................TGAAAGACGTTGCTGCTGCTTT......................................................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0 0
..................................................................................................................AAGGTTGATAAGCTACAACACAACA................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0 0 0
...........................................................................TTGAAAGACGTTGCTGCTGT............................................................................................................................................................ 20 1 5 0.20 1 0 0 0 1 0 0 0
...........................................................................TTGAAAGACTTTGCTGCTGCTT.......................................................................................................................................................... 22 1 5 0.20 1 1 0 0 0 0 0 0
............................................................................TGAAAGACGTTGCTGCTGCAA.......................................................................................................................................................... 21 2 5 0.20 1 1 0 0 0 0 0 0
............................................................................TGAAAGACGTTGCTGCTGCTTTGCA...................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0
...........................................................................TTCAAAGCAGTTGCTGCTGCTTTGCAC..................................................................................................................................................... 27 3 5 0.20 1 0 0 1 0 0 0 0
.......................................................................GAATTTGAAAGACGTTGCTGC............................................................................................................................................................... 21 0 5 0.20 1 0 0 1 0 0 0 0
............................................................................TGAAAGACGTTGCTGCTGT............................................................................................................................................................ 19 1 5 0.20 1 1 0 0 0 0 0 0
.............................................................................GAAAGACGTTGCTGCTGCTTTGCAC..................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0 0
..........................................................................TTTGAAAGACGTTGCTGCTACTT.......................................................................................................................................................... 23 1 5 0.20 1 1 0 0 0 0 0 0
..........................................................................TTTGAAAGACGTTGCTGCTGC............................................................................................................................................................ 21 0 5 0.20 1 1 0 0 0 0 0 0
...........................................................................TTGAAAGACGTTGCTGCTG............................................................................................................................................................. 19 0 5 0.20 1 0 1 0 0 0 0 0
..............................................................................AAAGACGTTGCTGCTGCT........................................................................................................................................................... 18 0 5 0.20 1 1 0 0 0 0 0 0
.......................................................................GAATTTGAAAGACGTTGCTGCTG............................................................................................................................................................. 23 0 5 0.20 1 1 0 0 0 0 0 0
...........................................................................TTGAAAGACGTTGCTGCTGCT........................................................................................................................................................... 21 0 5 0.20 1 1 0 0 0 0 0 0
...TGCTTGTGTGTTATGTCGACTCAACCCA............................................................................................................................................................................................................................ 28 2 6 0.17 1 0 0 1 0 0 0 0
......................................................................TCAGTTTGAAAGACGTTGCTGC............................................................................................................................................................... 22 3 6 0.17 1 0 1 0 0 0 0 0
.....CATGTGTGTTATGTCGACTCA................................................................................................................................................................................................................................. 21 0 6 0.17 1 1 0 0 0 0 0 0
............................................................................TGAAAGACGTTGCTGCTGA............................................................................................................................................................ 19 1 6 0.17 1 1 0 0 0 0 0 0
.....CATGTGTGTTATGTCAACTCAACCCAA........................................................................................................................................................................................................................... 27 1 6 0.17 1 1 0 0 0 0 0 0
.....CATGTGTGTTATGTCGACTCAA................................................................................................................................................................................................................................ 22 0 6 0.17 1 1 0 0 0 0 0 0
.....AATGTGTGTTATGTCGACTCAACCC............................................................................................................................................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0 0
.......TGTGTGTTATGTCGACTCAACCCA............................................................................................................................................................................................................................ 24 0 6 0.17 1 1 0 0 0 0 0 0
...TGCATGTGTGTTATGTCGACTCAACC.............................................................................................................................................................................................................................. 26 1 6 0.17 1 0 0 1 0 0 0 0
......ATGTGTGTTATGTCGACTCAAC............................................................................................................................................................................................................................... 22 0 6 0.17 1 1 0 0 0 0 0 0
......TCATGTGTTATGTCGACTCAACC.............................................................................................................................................................................................................................. 23 3 6 0.17 1 1 0 0 0 0 0 0
.........TTTGTTATGTCGACTCAACCCAATTC........................................................................................................................................................................................................................ 26 1 6 0.17 1 0 0 1 0 0 0 0
...............ATGTCGACTCAACCCAATTCCGC..................................................................................................................................................................................................................... 23 0 6 0.17 1 1 0 0 0 0 0 0
.......TGTGTGTTATGTCGACTCAACCCAATTC........................................................................................................................................................................................................................ 28 0 6 0.17 1 1 0 0 0 0 0 0
.........TTTGTTATGTCGACTCAACCCA............................................................................................................................................................................................................................ 22 1 6 0.17 1 0 0 1 0 0 0 0
.....CATGTGTGCTATGTCGACTCAACC.............................................................................................................................................................................................................................. 24 1 6 0.17 1 1 0 0 0 0 0 0
........GTGTGTTATGTCGACTCAACCCAA........................................................................................................................................................................................................................... 24 0 6 0.17 1 0 1 0 0 0 0 0
......TCATGTGTTATGTCGACTCAACCCA............................................................................................................................................................................................................................ 25 3 6 0.17 1 1 0 0 0 0 0 0
.........TGTGTTATGTCGACTCAACCCAAT.......................................................................................................................................................................................................................... 24 0 6 0.17 1 1 0 0 0 0 0 0
.....CATGTGTGTTATGTCGACTCAACCAA............................................................................................................................................................................................................................ 26 1 6 0.17 1 1 0 0 0 0 0 0
.........TGTGTTATGTCGACTCAACTCAAT.......................................................................................................................................................................................................................... 24 1 6 0.17 1 1 0 0 0 0 0 0
......ATGTGTGTTATGTCGACTCAACCCAA........................................................................................................................................................................................................................... 26 0 6 0.17 1 0 1 0 0 0 0 0
.....CATGTGTGTTATGTCGACTTAACC.............................................................................................................................................................................................................................. 24 1 6 0.17 1 0 0 1 0 0 0 0
........GTGTGTTATGTCGACTCAACC.............................................................................................................................................................................................................................. 21 0 6 0.17 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................TACCACAGTCTTTTTGGCGA..................... 20 3 6 0.17 1 0 0 0 0 0 1 0
......ATGTGTGTTATGTCGACTCAACCCA............................................................................................................................................................................................................................ 25 0 6 0.17 1 1 0 0 0 0 0 0
......CCATGTGTTATGTCGACTCAACC.............................................................................................................................................................................................................................. 23 3 6 0.17 1 1 0 0 0 0 0 0
..............TATGTCGACTCAACCCAAT.......................................................................................................................................................................................................................... 19 0 7 0.14 1 1 0 0 0 0 0 0
..................................................................GGTCCGAATTTGAAAGATGG..................................................................................................................................................................... 20 3 7 0.14 1 1 0 0 0 0 0 0
............GTTATGTCGACTCAACCCAA........................................................................................................................................................................................................................... 20 0 7 0.14 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................GGGGAGCCCGCACGCATGT....... 19 3 8 0.13 1 1 0 0 0 0 0 0
................................................................ATGGTCCGAACTTGAAAGA........................................................................................................................................................................ 19 3 20 0.10 2 1 0 0 0 0 0 1
..................................................................GGTCCGAACTTGAAAGATG...................................................................................................................................................................... 19 3 15 0.07 1 1 0 0 0 0 0 0

Anti-sense strand reads

CTGAGGTACACACAATACAGCTGAGTTGGGTTAAGGCGACTCGTATAATTCATTCATTCATCGTTTTCAGGCTTAAACTTTCTGCAACGACGACGAAACGTGTAAGAATGTGTCTTCCAACTATTCGATGTTGTGTTGTAGGGATTTTTCGGGTTCCAAAGGGTACCGTGCTTGCATCTACTATTACCGTTGTTCCGTAGGGACACAATGATGGTGTCATGAAAACCCCTAGCGCGTGCGTTCATTGCCGG
**********************************************************************..((((((((..(((...........))).))))))))((((..((..((((.....))))...))..))))..........((((..........(((.((....)).)))..........))))******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 GSM343916
embryo
 M059
embryo
 GSM444067
head
.............................................................................................................GTGTCTTCCAACTATTCGATGTT....................................................................................................................... 23 0 3 11.33 34 31 3 0 0 0 0
..............................................................................................................TGTCTTCCAACTATTCGATGTT....................................................................................................................... 22 0 3 9.00 27 19 8 0 0 0 0
..........................................................................................................AATGTGTCTTCCAACTATTCGATGTT....................................................................................................................... 26 0 1 2.00 2 0 0 2 0 0 0
.........................................CGTATAATTCATTCATTCATCGTT.......................................................................................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0 0
...................................................................................GCAACGACGACGAAACGTGTAAGAAT.............................................................................................................................................. 26 0 2 2.00 4 2 2 0 0 0 0
...............................................................................................................GTCTTCCAACTATTCGATGTT....................................................................................................................... 21 0 3 1.67 5 5 0 0 0 0 0
.............................................................................................................GTGTCTTCCAACTATTCGATGT........................................................................................................................ 22 0 3 1.00 3 3 0 0 0 0 0
...........................................................................................................ATGTGTCTTCCAACTATTCGATGTT....................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
...................................................ATTCATTCATCGTTTTCAGGCTTA................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
..............................TTAAGGCGACTCGTATAATTCATTCATT................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................TGTCTTCCAACTATTCGATGT........................................................................................................................ 21 0 3 0.67 2 2 0 0 0 0 0
....................................................................................CAACGACGACGAAACGTGTAAGAAT.............................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0
...............................................................................................................GTCTTCCAACTATTCGATGT........................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0
.............................................................................CTTTCTGCAACGACGACGAAACGTGT.................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0
................................................................................................................TCTTCCAACTATTCGATGTT....................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0
..........................................................................................CTACGAAACGTGCAAGAA............................................................................................................................................... 18 2 3 0.33 1 1 0 0 0 0 0
..............................................................................................................CGTCTTCCAACTATTCGATGTT....................................................................................................................... 22 1 4 0.25 1 0 0 0 0 1 0
..........................................................................................................................ATTCGATGTTGTGTTGTAGG............................................................................................................. 20 0 4 0.25 1 0 1 0 0 0 0
................................................................................................AAAGTGTAAGCATGTGTCT........................................................................................................................................ 19 2 4 0.25 1 1 0 0 0 0 0
...................................................................................................................................TGTCTTGTAGGGTTCTTTCGGGTT................................................................................................ 24 3 5 0.20 1 0 0 0 1 0 0
.........................................................................TAAACTTTCTGCAACGACGACGAAACGT...................................................................................................................................................... 28 0 5 0.20 1 1 0 0 0 0 0
.........................................................................TAAACTTTCTGCAACGACGACGAAAC........................................................................................................................................................ 26 0 5 0.20 1 1 0 0 0 0 0
........................................................................TTAAACTTTCTGCAACGACGACGAAA......................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
...............................................................................................................AACTTCCAACTATTCGATGTT....................................................................................................................... 21 2 5 0.20 1 1 0 0 0 0 0
...........................................................................AACTTTCTGCAACGACGACGAAACGT...................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
............................................................................ACTTTCTGCAACGACGACGAAAC........................................................................................................................................................ 23 0 5 0.20 1 1 0 0 0 0 0
........................GTCGGGATAAGGCGACTCG................................................................................................................................................................................................................ 19 2 6 0.17 1 1 0 0 0 0 0
.............AATACAGCTGAGTTGGGTT........................................................................................................................................................................................................................... 19 0 7 0.14 1 1 0 0 0 0 0
...........................GGGTTAAAGCGACTCGGCTA............................................................................................................................................................................................................ 20 3 9 0.11 1 1 0 0 0 0 0
.....................TGAGATAGGTTAACGCGAC................................................................................................................................................................................................................... 19 3 20 0.10 2 1 0 0 0 0 1
............................................ATAGTTCATTCATTC................................................................................................................................................................................................ 15 1 11 0.09 1 0 1 0 0 0 0
......................................................................................................................ATCTATTCGATGTTGTGGT.................................................................................................................. 19 2 13 0.08 1 0 0 0 1 0 0
.............................................................................................................................................................................GCATCTGCTATTACCATCG........................................................... 19 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_839:2660-2910 + dps_2269 GACTCCATGTGTGTTATGTCGA----CTCAAC--CCAATTCCGC------------------TGAGCATATTAAGTAA------GTAAGTAGCAA----AAGTCCGAATTTGAAAGACGTTGCTGCTGCTTTGCACATTCTTACACAGAAGGTTGATAAGCTACAACACAA----------------------------------------CATCCCTAAA--------------------------------------------------------AAGCCCAAGGTTTCCCATGGCAC-----GA-----------ACGTAGATGATAATGGCA------------------ACAAGGCATCCCTGTGTTACTACCACAGTACTTTTGGGGATCGCGCACGCAAGTAACGGCC
droPer2 scaffold_51:221218-221468 + GACTCCATGTGTGTTATGTCGA----CTCAAC--CCAATTCCGC------------------TGAGCATATTAAGTAA------GTAAGTAGCAA----AAGTCTGAATTTGAAAGACGTTGCTGCTGCTTTGCACATTCTTACACAGAAGGTTGATAAGCTACAACACAA----------------------------------------CATCCCTAAA--------------------------------------------------------AAGCCCAAGGTTTCCCATGGCAC-----GA-----------ACGTAGATGATAATGGCA------------------ACAAGGCATCCCTGTGTTACTACCACAGTACTTTTGGGGATCGCGCACGCAAGTAACGGCC
droWil2 scf2_1100000003659:1357-1619 - AATGCCATTTGCTCTGT-------------------------------------------------------------------------GACACCTAGCGATT---CAACTTCAGATGTTATAGAGAGTATACGTTTGCTTAACATAAAGTTCGAGAATCTTCAAAAGGAGCTA--AAACAGT---------TTCGATCAC----CTAAACATGATGCTCAGTCTCGCTCACGTAGCGCATCAAG------------------------------------------------TGACCGATCGC--CATGGAGCAACTC-----------ATCGCCTAAAAAAACGGAGGAACAACAATCCAAACTTTGTTTCTACCATCTTAAATTTGGGGATGATGCCAAAAAATATTGTTC
droVir3 scaffold_12954:375280-375526 - GAACCAACTTACGTAATGCCGA----CACAAA--CTGTAACTGC------------------TGAGCAAAAACAGCAGAATATTGTCAGTAACAA----TAGTCTGAGTTTAACTGATTTTGCGGCCACCTTACACGCGCTTTCGCAGAAAGTCGATAATCTACAAGCCGAATGT--G------------------------------------------G--------------------------------------------------------TAGCCCAAAACT----GTCATAC-----GC-----------ACGTAG--GATAGTGGCG------------------ATAAAAGATCGCTCTGCTGCTACCACAGCCAATTTGCTGATTGCTCCCGTAAATGTAAACC
droAna3 scaffold_13082:367119-367354 - GGCAACATAGCAAGTGTGGACG---------------------ATATTTCCCAGG---CAACTA--------AA--------------GGAGCTAATAGAGATC---CAATCTTAGATGTAACGCT----------------GGACTCAATAAAACAGCT--CCAAAGGGAAGTGAAAAGCATT---------ACGAATGACAA--CTCGACATCACGATC--------------------------------------------------------GCGTTTACAGTCGTCTTCAGCA---------------------------------------------ACTCAAAATGGCCAAGACGACTAGTGCTGGTATCATCAAAAGTTCGAGAATGCAGCCCGCAAATGTCAACC
droBip1 scf7180000392927:20352-20418 - CGAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATGAGAAGGACA------------------GCAAGGACACGCGATGCTATAATT---------------GCAATGCTCGAGGACATTGGGC
droFic1 scf7180000453815:1611-1882 - AGCACG------------------------AACACTTCGACTGCTGCTGATTCATCCATTTGCG--------CT--------------GCTTCTACCGAAGATC---CTTGGAAAAAAGTCAACGAGCAGCTGCGTTCGCTTTCACAAAAGTTTGATGATTTACAAAAGGATGTC--AAACGTC---------TCCAATTCCAAGGTC-------------------GCTCCCGCAGCCCATCGCG------------------------------------------------TAACCGACCAC--AAACGGGAAA--------------TGCTAATTACCAGTCCTCCGAGTCCCAAGAGAAGCTATGTTACTACCACGAGCGATTTGGAGAAAACGCCCACAAATGCCGTCC
droEle1 scf7180000491297:15201-15522 + GGATCTTCCAACACGTTCGCCATCTCTGCAGATGACGTAGCCGGAACCGCTTCGG---TGAATG--------CA--------------GTTGCTCGTCCGGAAT---CTATCGAGGACATCGCAGACTCTCTGCGTGCGCTGACAAAAAAGGTTGATACGATGCAAGCTGAATTC--AATCG-------AGTAATCGTTCCGCCAGTCAAAC-------------------TCGTGGATCATTTCA---CCGATCCGCTTCAGAACAACGCTCTTAATCGGCAACAGTTTCTGATGGTC----------------------------------CATTACAACAACCTGGCGATCCACAAGCTGAACTTTGCTATTATCATCGTCGTTTTGGAAATGATGCTCGCAAGTGCAAATC
droRho1 scf7180000773295:28729-28960 - AGCTCC---TTTGCGATCGA------CTCGAGCAACGTAACCGCTGGCACTAAGG---TGAATG--------CA--------------GTGACGCCGCCCGACG---CGTTTAAGAGTATTACCGAATCTTTACGTCAACTGGCCAAAAAGGTCGACACAATCCAAGGTGAGCAC--AAACGGCAATCCAGAGACCGTTCCATCAGCCAGAC-------------------ACACGCTTCGTCTCAGAACCGTTCTGGTTTTCAGTCACGCACTCAATCTCCGA-----------------------------------------------------------------------------------------------------------------------------ATGACT
droBia1 scf7180000302418:12603-12876 - AACGTCACTTTTGCGATCAAAA------CGAATACCATGACTAAAGCGAGTCCATCTATTTACG--------CA--------------ACTTCCACCGAAGATC---CCTGGAAAAAGATTACCGACAACTTGCGTTCGCTATCATATAAATTTGA-GTGTTGCAAAAGGATGTC--AAACATC---------TCCAATTCAAAGGAC-------------------GATCACTTAGTATAT-----------------------------------------------------------------AAACTGGAAA--------------TTTGAATCGTCCGGCATCTGGGCCTCAAGAGAAGCTATACTTTTACCTCGAACGATTTGGAGAAAACGCTCAAAAGTGACGCCC
droTak1 scf7180000411464:24024-24243 + GAATCTT----------------------------------------------------------------------------------------------------------------------------TATGTCAACTGGCCAAAAAGGTCGACACAATCCAAGGTGAGCTC--AAACGTCAAGCGAGAGACCGATCTGTCAGCCAGAC-------------------ACGCGGTTCGTCTCAGTACCGTTCTGGTTCTCAGCCACGCACTCAATCTCCGA-----------------------------ATGA--------------CACCCGTGCGCAG---TCAGATGACCAGCAAGAGCTTTGTTATTACCATCGTAGCTTTGGAAGTGGTGCACGCAAGTGCA----
droYak3 v2_chr2L_random_030:51174-51468 + AACGCCCCGTTTGCCATCGGCACATCTTCAACTGCAGTTCCTCCAGCAAATCCGGCTATCTGCG--------CA--------------GTTTCCCCTGCAGATC---CTTTGAAAGAACTTTCAGTCAATTTACGTTCGCTCATGCAAGATGTCACGGCATTGAAAAAGGATGTC--AAACGCA---------TCCAATCACGCAACC-------------------GATCACGCAGTTCATCTCG------------------------------------------------TGGCGCCAGAC--CAGCGGACAA--------------TTCCGGTCAACAGACTTCAGGAGCACAGGAAAATCTTTGTT-TTACCACAAGTGCTTTGGTGACAACGCAAATAAATGCCGACC
droEre2 scaffold_4784:25250984-25251279 + AACGTCTCGTTTGCCATCGGCACATCACCAACTTTTGTTCCTCCTGCAAATCCGGCTTTCTGTG--------CA--------------GTTTCCCCTGCAGATC---CTTTGAAAGAACTTTCCGACAACTTACGTTCGCTCATGCAAGATGTCACGGCATTGAAAAAGGATGTC--AAGCGCA---------ACCAATCACGCAACA-------------------GATCACGCTGTTCATCTTG------------------------------------------------TGGCGCCAGAC--CAGCGGACAA--------------TGCCGGTCAACAGACTTCCAGAGCACAGGAAAATCTTTGTTTCTACCACAAGCGCTTTGGTGACAACGCAAATAAATGCCGACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GACTCCATGTGTGTTATGTCGA----CTCAAC--CCAATTCCGC------------------TGAGCATATTAAGTAA------GTAAGTAGCAA----AAGTCCGAATTTGAAAGACGTTGCTGCTGCTTTGCACATTCTTACACAGAAGGTTGATAAGCTACAACACAA----------------------------------------CATCCCTAAA--------------------------------------------------------AAGCCCAAGGTTTCCCATGGCAC-----GA-----------ACGTAGATGATAATGGCA------------------ACAAGGCATCCCTGTGTTACTACCACAGTACTTTTGGGGATCGCGCACGCAAGTAACGGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................TAAGTAGCAA----AAGTCCGAATTTGAAA............................................................................................................................................................................................................................................................................................................26310.003002800001100
......................................................................................................TCCGAATTTGAAAGACGTTGCTGC.................................................................................................................................................................................................................................................................................................2438.0024011000001300
....CCATGTGTGTTATGTCGA----CTCAAC--C............................................................................................................................................................................................................................................................................................................................................................................................2544.751901610000200
....CCATGTGTGTTATGTCGA----CTCAAC--CCAA.........................................................................................................................................................................................................................................................................................................................................................................................2843.751501300000200
.....CATGTGTGTTATGTCGA----CTCAAC--CCAA.........................................................................................................................................................................................................................................................................................................................................................................................2763.001801510000200
.........................................................................................TAGCAA----AAGTCCGAATTTGAAAGACGT.......................................................................................................................................................................................................................................................................................................2732.6780000000800
.........................................................................................TAGCAA----AAGTCCGAATTTGAAAGACG........................................................................................................................................................................................................................................................................................................2632.6780500000300
.....CATGTGTGTTATGTCGA----CTCAAC--C............................................................................................................................................................................................................................................................................................................................................................................................2462.671601600000000
.....................................................................................TAAGTAGCAA----AAGTCCGAATTTGAA.............................................................................................................................................................................................................................................................................................................2532.3370700000000
......................................................................................................TCCGAATTTGAAAGACGTTGCTGCT................................................................................................................................................................................................................................................................................................2532.0060300000300
...............................................................................................................................................................................................................................................................................................TTTCCCATGGCAC-----GA-----------ACGTAGATG........................................................................................2412.0020200000000
.....CATGTGTGTTATGTCGA----CTCAAC--CCAAT........................................................................................................................................................................................................................................................................................................................................................................................2861.831101100000000
.....CATGTGTGTTATGTCGA----CTCAAC--CC...........................................................................................................................................................................................................................................................................................................................................................................................2561.831101100000000
....CCATGTGTGTTATGTCGA----CTCAAC--CC...........................................................................................................................................................................................................................................................................................................................................................................................2641.7570700000000
.....................................................................................TAAGTAGCAA----AAGTCCGAATTTGAAAA...........................................................................................................................................................................................................................................................................................................2731.6750100001300
.........TGTGTTATGTCGA----CTCAAC--CCAATTC......................................................................................................................................................................................................................................................................................................................................................................................2661.5090410000400
....CCATGTGTGTTATGTCGA----CTCAAC--.............................................................................................................................................................................................................................................................................................................................................................................................2441.5060600000000
.............................................................................................................TTGAAAGACGTTGCTGCTGCTTTG..........................................................................................................................................................................................................................................................................................2451.4070700000000
..............................................................................................................TGAAAGACGTTGCTGCTGCTT............................................................................................................................................................................................................................................................................................2151.4070500001100
..............TATGTCGA----CTCAAC--CCAATTCCGC------------------.................................................................................................................................................................................................................................................................................................................................................................2461.3380600000200
......................................................................................................TCCGAATTTGAAAGACGTTGCTG..................................................................................................................................................................................................................................................................................................2331.3340400000000
.....CATGTGTGTTATGTCGA----CTCAAC--CCA..........................................................................................................................................................................................................................................................................................................................................................................................2661.3380800000000
.........................................................................................................................................................TGATAAGCTACAACACAA----------------------------------------CATCCC......................................................................................................................................................................................................2441.2550400100000
....CCATGTGTGTTATGTCGA----CTCAAC--CCAAT........................................................................................................................................................................................................................................................................................................................................................................................2941.2550500000000
.............................................................................................................TTGAAAGACGTTGCTGCTGCTTT...........................................................................................................................................................................................................................................................................................2351.2060600000000
.....CATGTGTGTTATGTCGA----CTCAAC--.............................................................................................................................................................................................................................................................................................................................................................................................2361.1770700000000
.....................................................................................TAAGTAGCAA----AAGTCCGAATTTGA..............................................................................................................................................................................................................................................................................................................2431.0030300000000
.......................................................................TAAGTAA------GTAAGTAGCAA----AAGTCC......................................................................................................................................................................................................................................................................................................................2411.0010000001000
..........................................................................................................................................................................................................................................................................................................AC-----GA-----------ACGTAGATGATAATGGC................................................................................2121.0020000000002
............................................................................................................................................................TAAGCTACAACACAA----------------------------------------CATCCCTAAA--------------------------------------------------------..........................................................................................................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................................GCCCAAGGTTTCCCATGGCAC-----GA-----------ACG..............................................................................................2611.0010100000000
......................................................................................................TCCGAATTTGAAAGACGTTGCTGCTG...............................................................................................................................................................................................................................................................................................2631.0030300000000
..............................................................................................................................TGCTTTGCACATTCTTACACAGAAGGT......................................................................................................................................................................................................................................................................2711.0010100000000
............................................................................................................................................................TAAGCTACAACACAA----------------------------------------CATCCCTAAA--------------------------------------------------------AAG.......................................................................................................................................2811.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................ACTTTTGGGGATCGCGCACGC...........2111.0010100000000
..............................................................................................................TGAAAGACGTTGCTGCTGCTTTGCAC.......................................................................................................................................................................................................................................................................................2650.8040310000000
..............................................................................................................TGAAAGACGTTGCTGCTGC..............................................................................................................................................................................................................................................................................................1950.8040400000000
....CCATGTGTGTTATGTCGA----CTCAAC--CCA..........................................................................................................................................................................................................................................................................................................................................................................................2740.7530200000100
.......................................................................................................CCGAATTTGAAAGACGTTGCTGC.................................................................................................................................................................................................................................................................................................2340.7530300000000
............................................................................................................................................................TAAGCTACAACACAA----------------------------------------CATCCC......................................................................................................................................................................................................2140.7530300000000
.....................................................................................TAAGTAGCAA----AAGTCCGAATT.................................................................................................................................................................................................................................................................................................................2130.6720200000000
...........TGTTATGTCGA----CTCAAC--CCAATTCCGC------------------.................................................................................................................................................................................................................................................................................................................................................................2760.6740100000300
.....................................................................................TAAGTAGCAA----AAGTCCGAATTTGAAAGA..........................................................................................................................................................................................................................................................................................................2830.6720200000000
.....................................................................................TAAGTAGCAA----AAGTCCGAATTTG...............................................................................................................................................................................................................................................................................................................2330.6720200000000
.............................................................................................AA----AAGTCCGAATTTGAAAGACGT.......................................................................................................................................................................................................................................................................................................2330.6720200000000
.....................................................................................TAAGTAGCAA----AAGTCCGAATTTGAAAG...........................................................................................................................................................................................................................................................................................................2730.6720200000000
.............................................................................................AA----AAGTCCGAATTTGAAAGACGTTGC....................................................................................................................................................................................................................................................................................................2630.6720200000000
...........................................................................................................................................................................................................................................................................................................C-----GA-----------ACGTAGATGATAATGGCA------------------AC...........................................................2330.6720000000200
.............................................................................................................TTGAAAGACGTTGCTGCTGCTT............................................................................................................................................................................................................................................................................................2250.6030300000000
..............................................................................................................TGAAAGACGTTGCTGCTGCT.............................................................................................................................................................................................................................................................................................2050.6030200001000
..............TATGTCGA----CTCAAC--CCAATTCCGC------------------TG...............................................................................................................................................................................................................................................................................................................................................................2650.6030300000000
............................................................................................................TTTGAAAGACGTTGCTGCTG...............................................................................................................................................................................................................................................................................................2050.6030300000000
.............................................................................................................TTGAAAGACGTTGCTGCTGC..............................................................................................................................................................................................................................................................................................2050.6030200100000
.........TGTGTTATGTCGA----CTCAAC--CCAATTCCGC------------------.................................................................................................................................................................................................................................................................................................................................................................2950.6030300000000
....CCATGTGTGTTATGTCGA----CTCA.................................................................................................................................................................................................................................................................................................................................................................................................2240.5020200000000
.......TGTGTGTTATGTCGA----CTCAAC--CCAAT........................................................................................................................................................................................................................................................................................................................................................................................2660.5030300000000
.......................................................................................................CCGAATTTGAAAGACGTTGCTGCTG...............................................................................................................................................................................................................................................................................................2540.5020200000000
.........................................................................................................................................................TGATAAGCTACAACACAA----------------------------------------CATCC.......................................................................................................................................................................................................2340.5020110000000
.............................................................................................................TTGAAAGACGTTGCTGCTGCTTTGCAC.......................................................................................................................................................................................................................................................................................2750.4020200000000
............................................................................................................TTTGAAAGACGTTGCTGCTGCTT............................................................................................................................................................................................................................................................................................2350.4020200000000
................TGTCGA----CTCAAC--CCAATTCCGC------------------TGA..............................................................................................................................................................................................................................................................................................................................................................2550.4020100000100
................TGTCGA----CTCAAC--CCAATTCCGC------------------T................................................................................................................................................................................................................................................................................................................................................................2350.4020200000000
.....................................................................................TAAGTAGCAA----AAGTCCGAATTT................................................................................................................................................................................................................................................................................................................2230.3310100000000
......................................................................................AAGTAGCAA----AAGTCCGAATTTGAA.............................................................................................................................................................................................................................................................................................................2430.3310100000000
.........................................................................................TAGCAA----AAGTCCGAATTTGAAAGAC.........................................................................................................................................................................................................................................................................................................2530.3310100000000
..................................................................................................................................................AGAAGGTTGATAAGCTACAACACAA----------------------------------------CA..........................................................................................................................................................................................................2730.3310100000000
.......TGTGTGTTATGTCGA----CTCAAC--C............................................................................................................................................................................................................................................................................................................................................................................................2260.3320200000000
.....................................................................................TAAGTAGCAA----AAGTCCGAATTTGAAAGAC.........................................................................................................................................................................................................................................................................................................2930.3310010000000
.........TGTGTTATGTCGA----CTCAAC--CCAATTCC.....................................................................................................................................................................................................................................................................................................................................................................................2760.3320200000000
......................................................................................AAGTAGCAA----AAGTCCGAATTTGAAAGA..........................................................................................................................................................................................................................................................................................................2730.3310100000000
....................................................................................................AGTCCGAATTTGAAAGACGTTGC....................................................................................................................................................................................................................................................................................................2330.3310100000000
.............TTATGTCGA----CTCAAC--CCAATTCCGC------------------.................................................................................................................................................................................................................................................................................................................................................................2560.3320200000000
.........TGTGTTATGTCGA----CTCAAC--CCAATTCA.....................................................................................................................................................................................................................................................................................................................................................................................2760.3320200000000
......................................................................................AAGTAGCAA----AAGTCCGAATTTGAAA............................................................................................................................................................................................................................................................................................................2530.3310100000000
......................................................................................AAGTAGCAA----AAGTCCGAATTTGA..............................................................................................................................................................................................................................................................................................................2330.3310100000000
.....................................................................................TAAGTAGCAA----AAGTCCGAA...................................................................................................................................................................................................................................................................................................................1930.3310100000000
.......TGTGTGTTATGTCGA----CTCAAC--CCAA.........................................................................................................................................................................................................................................................................................................................................................................................2560.3320200000000
......................................................................................................TCCGAATTTGAAAGACGTTGCTGCTA...............................................................................................................................................................................................................................................................................................2630.3310100000000
.........................................................................................TAGCAA----AAGTCCGAATTTGAAAGA..........................................................................................................................................................................................................................................................................................................2430.3310100000000
.................................................................................................................................................................................................................................................................................................................................TAGATGATAATGGCA------------------ACAAGGCATCC..................................................2630.3310100000000
........................................................................................................................................................................................................................................................................................................................................TAATGGCA------------------ACAAGGCATCCCTGTG.............................................2430.3310100000000
......................................................................................................TCCGAATTTGAAAGACGTTGCT...................................................................................................................................................................................................................................................................................................2230.3310010000000
...............................................................................................................................................CACAGAAGGTTGATAAGCTACAACA.......................................................................................................................................................................................................................................................2530.3310100000000
.....................................................................................................GTCCGAATTTGAAAGACGTTGCTGC.................................................................................................................................................................................................................................................................................................2530.3310100000000
.....................................................................................................................................................................................................................................................................................................................................TGATAATGGCA------------------ACAAGGCATCCCT................................................2430.3310100000000
..............................................................................................A----AAGTCCGAATTTGAAAGACGTTGCTG..................................................................................................................................................................................................................................................................................................2730.3310100000000
.......................................................................................AGTAGCAA----AAGTCCGAATTTGAAA............................................................................................................................................................................................................................................................................................................2430.3310100000000
....CCATGTGTGTTATGTCGA----CT...................................................................................................................................................................................................................................................................................................................................................................................................2040.2510100000000
.......................................................................................................CCGAATTTGAAAGACGTTGCTGCTGCT.............................................................................................................................................................................................................................................................................................2740.2511000000000
....CCATGTGTGTTATGTCGA----CTCAA................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
..CTCCATGTGTGTTATGTCGA----CTCAAC--A............................................................................................................................................................................................................................................................................................................................................................................................2740.2510100000000
...TCCATGTGTGTTATGTCGA----CTCAA................................................................................................................................................................................................................................................................................................................................................................................................2440.2510100000000
............................................................................................................................................................TAAGCTACAACACAA----------------------------------------CATCC.......................................................................................................................................................................................................2040.2510010000000
..............................................................................................................TGAAAGACGTTGCTGCTGCTTC...........................................................................................................................................................................................................................................................................................2250.2010010000000
..........................................................................................................AATTTGAAAGACGTTGCTGCT................................................................................................................................................................................................................................................................................................2150.2010100000000
..............................................................................................................TGAAAGACGTTGCTGCTGCTC............................................................................................................................................................................................................................................................................................2150.2010010000000
..............................................................................................................TGAAAGACGTTGCTGCTGCTTT...........................................................................................................................................................................................................................................................................................2250.2010100000000
....................................................................................................................................................AAGGTTGATAAGCTACAACACAA----------------------------------------CA..........................................................................................................................................................................................................2550.2010100000000
.............................................................................................................TTGAAAGACGTTGCTGCTGT..............................................................................................................................................................................................................................................................................................2050.2010000001000
..............................................................................................................TGAAAGACGTTGCTGCTGCAA............................................................................................................................................................................................................................................................................................2150.2010100000000
..............................................................................................................TGAAAGACGTTGCTGCTGCTTTGCA........................................................................................................................................................................................................................................................................................2550.2010100000000
.........................................................................................................GAATTTGAAAGACGTTGCTGC.................................................................................................................................................................................................................................................................................................2150.2010010000000
..............................................................................................................TGAAAGACGTTGCTGCTGT..............................................................................................................................................................................................................................................................................................1950.2010100000000
...............................................................................................................GAAAGACGTTGCTGCTGCTTTGCAC.......................................................................................................................................................................................................................................................................................2550.2010100000000
............................................................................................................TTTGAAAGACGTTGCTGCTGC..............................................................................................................................................................................................................................................................................................2150.2010100000000
.............................................................................................................TTGAAAGACGTTGCTGCTG...............................................................................................................................................................................................................................................................................................1950.2010000000100
................................................................................................................AAAGACGTTGCTGCTGCT.............................................................................................................................................................................................................................................................................................1850.2010100000000
.........................................................................................................GAATTTGAAAGACGTTGCTGCTG...............................................................................................................................................................................................................................................................................................2350.2010100000000
.............................................................................................................TTGAAAGACGTTGCTGCTGCT.............................................................................................................................................................................................................................................................................................2150.2010100000000
.....CATGTGTGTTATGTCGA----CTCA.................................................................................................................................................................................................................................................................................................................................................................................................2160.1710100000000
..............................................................................................................TGAAAGACGTTGCTGCTGA..............................................................................................................................................................................................................................................................................................1960.1710100000000
.....CATGTGTGTTATGTCGA----CTCAA................................................................................................................................................................................................................................................................................................................................................................................................2260.1710100000000
.......TGTGTGTTATGTCGA----CTCAAC--CCA..........................................................................................................................................................................................................................................................................................................................................................................................2460.1710100000000
......ATGTGTGTTATGTCGA----CTCAAC--.............................................................................................................................................................................................................................................................................................................................................................................................2260.1710100000000
...............ATGTCGA----CTCAAC--CCAATTCCGC------------------.................................................................................................................................................................................................................................................................................................................................................................2360.1710100000000
.......TGTGTGTTATGTCGA----CTCAAC--CCAATTC......................................................................................................................................................................................................................................................................................................................................................................................2860.1710100000000
........GTGTGTTATGTCGA----CTCAAC--CCAA.........................................................................................................................................................................................................................................................................................................................................................................................2460.1710000000100
.........TGTGTTATGTCGA----CTCAAC--CCAAT........................................................................................................................................................................................................................................................................................................................................................................................2460.1710100000000
......ATGTGTGTTATGTCGA----CTCAAC--CCAA.........................................................................................................................................................................................................................................................................................................................................................................................2660.1710000000100
........GTGTGTTATGTCGA----CTCAAC--C............................................................................................................................................................................................................................................................................................................................................................................................2160.1710100000000
......ATGTGTGTTATGTCGA----CTCAAC--CCA..........................................................................................................................................................................................................................................................................................................................................................................................2560.1710100000000
..............TATGTCGA----CTCAAC--CCAAT........................................................................................................................................................................................................................................................................................................................................................................................1970.1410100000000
............GTTATGTCGA----CTCAAC--CCAA.........................................................................................................................................................................................................................................................................................................................................................................................2070.1410100000000
droPer2
GACTCCATGTGTGTTATGTCGA----CTCAAC--CCAATTCCGC------------------TGAGCATATTAAGTAA------GTAAGTAGCAA----AAGTCTGAATTTGAAAGACGTTGCTGCTGCTTTGCACATTCTTACACAGAAGGTTGATAAGCTACAACACAA----------------------------------------CATCCCTAAA--------------------------------------------------------AAGCCCAAGGTTTCCCATGGCAC-----GA-----------ACGTAGATGATAATGGCA------------------ACAAGGCATCCCTGTGTTACTACCACAGTACTTTTGGGGATCGCGCACGCAAGTAACGGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......TGTGTGTTATGTCGA----CTCAAC--CCAAT........................................................................................................................................................................................................................................................................................................................................................................................26921.4419311893000
.......TGTGTGTTATGTCGA----CTCAAC--CCAA.........................................................................................................................................................................................................................................................................................................................................................................................2596.00541512000
.......................................................................................................................................................................................................................................................................................GCCCAAGGTTTCCCATGGCAC-----GA-----------ACG..............................................................................................2625.50110110000
........................................................................................................................................................................................................................................................................................CCCAAGGTTTCCCATGGCAC-----GA-----------ACG..............................................................................................2522.505050000
........GTGTGTTATGTCGA----CTCAAC--CCAAT........................................................................................................................................................................................................................................................................................................................................................................................2592.44220220000
.......TGTGTGTTATGTCGA----CTCAAC--CCAATTC......................................................................................................................................................................................................................................................................................................................................................................................2891.78160160000
..........................................................................................................................................................................................................................................................................................CAAGGTTTCCCATGGCAC-----GA-----------ACGTAGA..........................................................................................2721.503030000
..............................................................................................................TGAAAGACGTTGCTGCTGCTTTGCAC.......................................................................................................................................................................................................................................................................................2641.255230000
..............................................................................................................TGAAAGACGTTGCTGCTGCTT............................................................................................................................................................................................................................................................................................2141.004220000
.......TGTGTGTTATGTCGA----CTCAAC--CCA..........................................................................................................................................................................................................................................................................................................................................................................................24100.909090000
............................................................................................................TTTGAAAGACGTTGCTGCTG...............................................................................................................................................................................................................................................................................................2040.753030000
.......TGTGTGTTATGTCGA----CTCAAC--CCAATT.......................................................................................................................................................................................................................................................................................................................................................................................2790.676060000
...........................................................................................................................................................................................................................................................................................AAGGTTTCCCATGGCAC-----GA-----------ACGTAGAA.........................................................................................2720.501010000
...............................................................................................................................................................................................................................................................................................TTTCCCATGGCAC-----GA-----------ACGTAGATGAA......................................................................................2620.501010000
......................................................................................................................................................................................................................................................................................AGCCCAAGGTTTCCCATGGCAC-----GA-----------ACG..............................................................................................2720.501010000
...............................................................................................................................................................................................................................................................................................TTTCCCATGGCAC-----GA-----------ACGTAGATGA.......................................................................................2520.501010000
........................................................................................................................................................................................................................................................................................CCCAAGGTTTCCCATGGCAC-----GA-----------ACGTA............................................................................................2720.501010000
......................................................................................................................................................................................................................................................................................AGCCCAAGGTTTCCCATGGCAC-----GA-----------A................................................................................................2520.501010000
..........................................................................................................................................................................................................................................................................................CAAGGTTTCCCATGGCAC-----GA-----------ACGTA............................................................................................2520.501010000
............................................................................................................................................................................................................................................................................................AGGTTTCCCATGGCAC-----GA-----------ACGTAGA..........................................................................................2520.501010000
...............................................................................................................GAAAGACGTTGCTGCTGCTA............................................................................................................................................................................................................................................................................................2040.502110000
.............................................................................................................TTGAAAGACGTTGCTGCTGCTTTGCAC.......................................................................................................................................................................................................................................................................................2740.502110000
.................................................................................................................................................................................................................................................................................................TCCCATGGCAC-----GA-----------ACGTAGATGAT......................................................................................2420.501010000
.........................................................................................................................................................TGATAAGCTACAACACAA----------------------------------------CATCCC......................................................................................................................................................................................................2440.502020000
........GTGTGTTATGTCGA----CTCAAC--CCAA.........................................................................................................................................................................................................................................................................................................................................................................................2490.333030000
.........TGTGTTATGTCGA----CTCAAC--CCAATTCC.....................................................................................................................................................................................................................................................................................................................................................................................2790.333030000
.......TGTGTGTTATGTCGA----CTCAAC--CCAATA.......................................................................................................................................................................................................................................................................................................................................................................................2790.333030000
...........TGTTATGTCGA----CTCAAC--CCAATTCCGC------------------.................................................................................................................................................................................................................................................................................................................................................................2790.333030000
.......TGTGTGTTATGTCGA----CTCAAC--CC...........................................................................................................................................................................................................................................................................................................................................................................................23100.303030000
...TCCATGTGTGTTATGTCGA----CTCAAC--C............................................................................................................................................................................................................................................................................................................................................................................................26110.273030000
..............................................................................................................TGAAAGACGTTGCTGCTGCTTT...........................................................................................................................................................................................................................................................................................2240.251010000
...............................................................................................................GAAAGACGTTGCTGCTGCTTTG..........................................................................................................................................................................................................................................................................................2240.251010000
..............................................................................................................TGAAAGACGTTGCTGCTGC..............................................................................................................................................................................................................................................................................................1940.251010000
.........................................................................................................................................................TGATAAGCTACAACACAA----------------------------------------CATCC.......................................................................................................................................................................................................2340.251010000
.............................................................................................................TTGAAAGACGTTGCTGCTGCTTT...........................................................................................................................................................................................................................................................................................2340.251010000
..............................................................................................................TGAAAGACGTTGCTGCTGCTTTG..........................................................................................................................................................................................................................................................................................2340.251010000
................................................................................................................AAAGACGTTGCTGCTGCTTTG..........................................................................................................................................................................................................................................................................................2140.251010000
............................................................................................................TTTGAAAGACGTTGCTGCTGCTT............................................................................................................................................................................................................................................................................................2340.251010000
....................................................................................................................................................AAGGTTGATAAGCTACAACACAA----------------------------------------CATC........................................................................................................................................................................................................2740.251010000
.............................................................................................................TTGAAAGACGTTGCTGCTGCC.............................................................................................................................................................................................................................................................................................2140.251100000
................................................................................................................AAAGACGTTGCTGCTGCTTTGC.........................................................................................................................................................................................................................................................................................2240.251010000
............................................................................................................TTTGAAAGACGTTGCTGCTGCTTTGCAC.......................................................................................................................................................................................................................................................................................2840.251010000
............................................................................................................TTTGAAAGACGTTGCTGCTGCTTT...........................................................................................................................................................................................................................................................................................2440.251010000
.......TGTGTGTTATGTCGA----CTCAAC--CCAAA........................................................................................................................................................................................................................................................................................................................................................................................2690.222020000
..............................................................................................................................................................................................................................................................................................................................................CA------------------ACAAGGCATCCCTGTGTTACTACC.....................................2650.201010000
....................................................................................................................................................AAGGTTGATAAGCTACAACA.......................................................................................................................................................................................................................................................2060.171010000
..............TATGTCGA----CTCAAC--CCAATTCCGC------------------TG...............................................................................................................................................................................................................................................................................................................................................................2670.141010000
..............TATGTCGA----CTCAAC--CCAATTCCGC------------------TGAT.............................................................................................................................................................................................................................................................................................................................................................2870.141100000
.......TGTGTGTTATGTCGA----CTCAAC--CCAAC........................................................................................................................................................................................................................................................................................................................................................................................2690.111010000
.........TGTGTTATGTCGA----CTCAAC--CCAATTC......................................................................................................................................................................................................................................................................................................................................................................................2690.111010000
........GTGTGTTATGTCGA----CTCAAC--CCAATA.......................................................................................................................................................................................................................................................................................................................................................................................2690.111010000
....CCATGTGTGTTATGTCGA----CTCAAC--CCAAT........................................................................................................................................................................................................................................................................................................................................................................................2990.111010000
....CCATGTGTGTTATGTCGA----CTCAAC--CCAA.........................................................................................................................................................................................................................................................................................................................................................................................2890.111010000
........GTGTGTTATGTCGA----CTCAAC--CCAATTC......................................................................................................................................................................................................................................................................................................................................................................................2790.111010000
.........TGTGTTATGTCGA----CTCAAC--CCAAT........................................................................................................................................................................................................................................................................................................................................................................................2490.111010000
............GTTATGTCGA----CTCAAC--CCAATTCC.....................................................................................................................................................................................................................................................................................................................................................................................24100.101010000
...TCCATGTGTGTTATGTCGA----CTCAAC--CC...........................................................................................................................................................................................................................................................................................................................................................................................27100.101100000
............GTTATGTCGA----CTCAAC--CCAAT........................................................................................................................................................................................................................................................................................................................................................................................21100.101010000
....CCATGTGTGTTATGTCGA----CTCAAC--C............................................................................................................................................................................................................................................................................................................................................................................................25110.091010000
..........GTGTTATGTCGA----CTCAAC--CC...........................................................................................................................................................................................................................................................................................................................................................................................20110.091010000
.......TGTGTGTTATGTCGA----CTCAAC--C............................................................................................................................................................................................................................................................................................................................................................................................22110.091010000
.......TGTGTGTTATGTCGA----CTCA.................................................................................................................................................................................................................................................................................................................................................................................................19110.091010000
......ATGTGTGTTATGTCGA----CTCAAC--.............................................................................................................................................................................................................................................................................................................................................................................................22110.091010000
droWil2
AATGCCATTTGCTCTGT-------------------------------------------------------------------------GACACCTAGCGATT---CAACTTCAGATGTTATAGAGAGTATACGTTTGCTTAACATAAAGTTCGAGAATCTTCAAAAGGAGCTA--AAACAGT---------TTCGATCAC----CTAAACATGATGCTCAGTCTCGCTCACGTAGCGCATCAAG------------------------------------------------TGACCGATCGC--CATGGAGCAACTC-----------ATCGCCTAAAAAAACGGAGGAACAACAATCCAAACTTTGTTTCTACCATCTTAAATTTGGGGATGATGCCAAAAAATATTGTTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................TCAGATGTTATAGAGAGTATACG........................................................................................................................................................................................................................................................................................2340.50201010
....................................................................................................................................................................................................................ATGATGCTCAGTCTCGCTCACGTAG..................................................................................................................................................................................25120.33404000
......................................................................................................................................................................................................TCAC----CTAAACATGATGCTCAGTCTCGC..........................................................................................................................................................................................2770.29200020
..............................................................................................................................................................................................................CTAAACATGATGCTCAGTCTCGC..........................................................................................................................................................................................2370.29201010
..TGCCATTTGCTCTGT-------------------------------------------------------------------------GACACCTAGCGA.........................................................................................................................................................................................................................................................................................................................2740.25101000
..TGCCATTTGCTCTGT-------------------------------------------------------------------------GACACCTAGCGAT........................................................................................................................................................................................................................................................................................................................2840.25101000
..........................................................................................GACACCTAGCGATT---CAACTTCAGATGT.......................................................................................................................................................................................................................................................................................................2740.25100010
..............TGT-------------------------------------------------------------------------GACACCTAGCGATT---CAACT...............................................................................................................................................................................................................................................................................................................2240.25100010
............................................................................................................................................................GAATCTTCAAAAGGAGCTA--AAACAGT---------..............................................................................................................................................................................................................................2640.25101000
.........TGCTCTGT-------------------------------------------------------------------------GACACCTAGCGATT---CAACT...............................................................................................................................................................................................................................................................................................................2740.25101000
.................................................................................................................CAGATGTTATAGAGAGTATACG........................................................................................................................................................................................................................................................................................2240.25101000
.............................................................................................................................................................................TA--AAACAGT---------TTCGATCAC----CT...............................................................................................................................................................................................................2050.20100010
............................................................................................................................................................................CTA--AAACAGT---------TTCGATCAC----CTAAACA..........................................................................................................................................................................................................2650.20101000
....CCATTTGCTCTGT-------------------------------------------------------------------------GACACCT..............................................................................................................................................................................................................................................................................................................................2050.20101000
........................................................................................................................................................................................................AC----CTAAACATGATGCTCAGTCTCGC..........................................................................................................................................................................................2570.14101000
...............................................................................................................................................................................................................TAAACATGATGCTCAGTCTCGCTCACG.....................................................................................................................................................................................2770.14100010
.......................................................................................................................................................................................................CAC----CTAAACATGATGCTCAGTCTCGCT.........................................................................................................................................................................................2770.14101000
...............................................................................................................................................................................................................TAAACATGATGCTCAGTCTCGCTCAC......................................................................................................................................................................................2670.14101000
...........................................................................................................................................................AGAATCTTCAAAAGGAGCTA--AAA...........................................................................................................................................................................................................................................2370.14100100
......................................................................................................................................................................................................TCAC----CTAAACATGATGCTCAGTCTCGCT.........................................................................................................................................................................................2870.14101000
............................................................................................................................................................GAATCTTCAAAAGGAGCTA--AAAA..........................................................................................................................................................................................................................................2370.14101000
......................................................................................................................................................................................................TCAC----CTAAACATGATGCTCAGTCT.............................................................................................................................................................................................2480.13101000
..............................................................................................................................................................................................................................................................................................................................................................................TTTGTTTCTACCATCTTAAATTTGGGGA.....................2890.11101000
..............................................................................................................................................................................................................................................................................................................................................................................TTTGTTTCTACCATCTTAAATTTG.........................24100.10101000
..............................................................................................................................................................................................................................................................................................................................................................................TTTGTTTCTACCATCTTAAATTTGGGG......................27100.10101000
....................................................................................................................................................................................................................................................................................................................................................................CAATCCAAACTTTGTTTCTACC.....................................22100.10101000
..................................................................................................................................................TAAAGTTCGAGAATCTTCAAAAGGAGC..................................................................................................................................................................................................................................................27120.08101000
....................................................................................................................................................................................................................ATGATGCTCAGTCTCGCTCACGT....................................................................................................................................................................................23150.07100010
................................................................................................................................................................................................................AAACATGATGCTCAGTCTCGCT.........................................................................................................................................................................................22160.06101000
..................................................................................................................................................................................................................ACATGATGCTCAGTCTCGCT.........................................................................................................................................................................................20170.06101000
.........................................................................................................................................................CGAGAATCTTCAAAAGGAGCT.................................................................................................................................................................................................................................................21170.06100100
..............................................................................................................CTTCAGATGTTATAGAGA...............................................................................................................................................................................................................................................................................................18180.06100010
droVir3
GAACCAACTTACGTAATGCCGA----CACAAA--CTGTAACTGC------------------TGAGCAAAAACAGCAGAATATTGTCAGTAACAA----TAGTCTGAGTTTAACTGATTTTGCGGCCACCTTACACGCGCTTTCGCAGAAAGTCGATAATCTACAAGCCGAATGT--G------------------------------------------G--------------------------------------------------------TAGCCCAAAACT----GTCATAC-----GC-----------ACGTAG--GATAGTGGCG------------------ATAAAAGATCGCTCTGCTGCTACCACAGCCAATTTGCTGATTGCTCCCGTAAATGTAAACCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................TTTGCGGCCACCTTACACGCGCTTTCGCC............................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AACT----GTCATAC-----GC-----------ACGTAG--GA.......................................................................................2111.001000010000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AACT----GTCATAC-----GC-----------ACGTAG--GATA.....................................................................................2311.001000010000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................AACT----GTCATAC-----GC-----------ACGTAG--GAT......................................................................................2211.001000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTACCA....................................2390.787002010000000000000000000000000000000004000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTAC......................................2190.676000020000000000000000000000000000000004000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTACCACAGCC...............................2880.635300000000000000000000000000000000000002000000000000000000000000
............................CAAA--CTGTAACTGC------------------TGAGCAAAAACA.....................................................................................................................................................................................................................................................................................................................................................2690.565000000000000000000000000000000000000005000000000000000000000000
......................................................................................................TCTGAGTTTAACTGATTTTGCGGC.................................................................................................................................................................................................................................................................................................2460.503000000000000000000000000000000000000003000000000000000000000000
.............................................................................................................................................................................................................................................................................................AACT----GTCATAC-----GC-----------ACGTAG--.........................................................................................1920.501000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTACC.....................................2290.444300000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTACCAC...................................2480.383000010100000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................ATAAAAGATCGCTCTGCTGC.........................................2070.292000000000000000000000000000000000000002000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAGCCAATTTGCTGATTGCTCCCG............2580.252000000000000000000000000000000000000000000000000000000000000002
...........................................................................................................GTTTAACTGATTTTGCGGCCACCT............................................................................................................................................................................................................................................................................................2440.251000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTACCACAG.................................2680.252100000100000000000000000000000000000000000000000000000000000000
.............................AAA--CTGTAACTGC------------------TGAGCAAA.........................................................................................................................................................................................................................................................................................................................................................2190.222000110000000000000000000000000000000000000000000000000000000000
............................CAAA--CTGTAACTGC------------------TGAGCAAA.........................................................................................................................................................................................................................................................................................................................................................2290.222000010000000000000000000000000000000001000000000000000000000000
............................CAAA--CTGTAACTGC------------------TGAGCAAAAAC......................................................................................................................................................................................................................................................................................................................................................2590.222000010000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCT........................................1990.222100000000000000000000000000000000000001000000000000000000000000
......................................................................................................TCTGAGTTTAACTGATTTTGCGGCC................................................................................................................................................................................................................................................................................................2560.171000000000000000000000000000000000000001000000000000000000000000
.......................................................................................................CTGAGTTTAACTGATTTTGCGGC.................................................................................................................................................................................................................................................................................................2360.171000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TAATCTACAAGCCGAATGT--G------------------------------------------G--------------------------------------------------------TAGCCC....................................................................................................................................2770.141001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAGTCGATAATCTACAAGCCG.....................................................................................................................................................................................................................................................2170.141000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................AAGTCGATAATCTACAAGCCGAATG.................................................................................................................................................................................................................................................2570.141000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................AAGTCGATAATCTACAAGCCGAATAG--..............................................................................................................................................................................................................................................2670.141000010000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................CTACAAGCCGAATGT--G------------------------------------------G--------------------------------------------------------TAGC......................................................................................................................................2170.141000000000000000000000001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTACCACAGCCA..............................2980.131100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AAAGTCGATAATCTACAAG........................................................................................................................................................................................................................................................1980.131000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AAGTCGATAATCTACAAGCC......................................................................................................................................................................................................................................................2080.131000000000000010000000000000000000000000000000000000000000000000
...........................ACAAA--CTGTAACTGC------------------TGAGCAAAAACA.....................................................................................................................................................................................................................................................................................................................................................2790.111001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTACCC....................................2390.111000000000000000000000000000000000000001000000000000000000000000
............................CAAA--CTGTAACTGC------------------TGAGCAAAAA.......................................................................................................................................................................................................................................................................................................................................................2490.111000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CAAGCCGAATGT--G------------------------------------------G--------------------------------------------------------TAGCCCA...................................................................................................................................2190.111000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTATG.....................................2290.111000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTATA.....................................2290.111000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCTA.......................................2090.111001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGCCT.......................................2090.111100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCTGATTGCTCCCGTAA.........2190.111000000100000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................AAGCCGAATGT--G------------------------------------------G--------------------------------------------------------TAGCCCAA..................................................................................................................................2190.111001000000000000000000000000000000000000000000000000000000000000
..................................CTGTAACTGC------------------TGAGCAAAAACA.....................................................................................................................................................................................................................................................................................................................................................22100.101000000000000000000000000000000000000001000000000000000000000000
..........................CACAAA--CTGTAACTGC------------------TGAGC............................................................................................................................................................................................................................................................................................................................................................21110.091001000000000000000000000000000000000000000000000000000000000000
...................................TGTAACTGC------------------TGAGCAAAAACA.....................................................................................................................................................................................................................................................................................................................................................21110.091000000000000000000000000000000000000001000000000000000000000000
............................CAAA--CTGTAACTGC------------------TGAGCAA..........................................................................................................................................................................................................................................................................................................................................................21110.091000010000000000000000000000000000000000000000000000000000000000
............................CAAA--CTGTAACTGC------------------TGAGC............................................................................................................................................................................................................................................................................................................................................................19110.091000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AAAAGATCGCTCTGCTGAAT.......................................20200.051000010000000000000000000000000000000000000000000000000000000000
droAna3
GGCAACATAGCAAGTGTGGACG---------------------ATATTTCCCAGG---CAACTA--------AA--------------GGAGCTAATAGAGATC---CAATCTTAGATGTAACGCT----------------GGACTCAATAAAACAGCT--CCAAAGGGAAGTGAAAAGCATT---------ACGAATGACAA--CTCGACATCACGATC--------------------------------------------------------GCGTTTACAGTCGTCTTCAGCA---------------------------------------------ACTCAAAATGGCCAAGACGACTAGTGCTGGTATCATCAAAAGTTCGAGAATGCAGCCCGCAAATGTCAACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................TC---CAATCTTAGATGTAACGCT----------------GGAC.............................................................................................................................................................................................................................................................................2511.001010000
.....................................................................................................................................................ATAAAACAGCT--CCAAAGGGAA...................................................................................................................................................................................................................................................2150.201000001
droBip1
CGAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATGAGAAGGACA------------------GCAAGGACACGCGATGCTATAATT---------------GCAATGCTCGAGGACATTGGGCSizeHit CountTotal NormTotal
No Reads
droFic1
AGCACG------------------------AACACTTCGACTGCTGCTGATTCATCCATTTGCG--------CT--------------GCTTCTACCGAAGATC---CTTGGAAAAAAGTCAACGAGCAGCTGCGTTCGCTTTCACAAAAGTTTGATGATTTACAAAAGGATGTC--AAACGTC---------TCCAATTCCAAGGTC-------------------GCTCCCGCAGCCCATCGCG------------------------------------------------TAACCGACCAC--AAACGGGAAA--------------TGCTAATTACCAGTCCTCCGAGTCCCAAGAGAAGCTATGTTACTACCACGAGCGATTTGGAGAAAACGCCCACAAATGCCGTCCSizeHit CountTotal NormTotal
No Reads
droEle1
GGATCTTCCAACACGTTCGCCATCTCTGCAGATGACGTAGCCGGAACCGCTTCGG---TGAATG--------CA--------------GTTGCTCGTCCGGAAT---CTATCGAGGACATCGCAGACTCTCTGCGTGCGCTGACAAAAAAGGTTGATACGATGCAAGCTGAATTC--AATCG-------AGTAATCGTTCCGCCAGTCAAAC-------------------TCGTGGATCATTTCA---CCGATCCGCTTCAGAACAACGCTCTTAATCGGCAACAGTTTCTGATGGTC----------------------------------CATTACAACAACCTGGCGATCCACAAGCTGAACTTTGCTATTATCATCGTCGTTTTGGAAATGATGCTCGCAAGTGCAAATCSizeHit CountTotal NormTotal
No Reads
droRho1
AGCTCC---TTTGCGATCGA------CTCGAGCAACGTAACCGCTGGCACTAAGG---TGAATG--------CA--------------GTGACGCCGCCCGACG---CGTTTAAGAGTATTACCGAATCTTTACGTCAACTGGCCAAAAAGGTCGACACAATCCAAGGTGAGCAC--AAACGGCAATCCAGAGACCGTTCCATCAGCCAGAC-------------------ACACGCTTCGTCTCAGAACCGTTCTGGTTTTCAGTCACGCACTCAATCTCCGA-----------------------------------------------------------------------------------------------------------------------------ATGACTSizeHit CountTotal NormTotal
No Reads
droBia1
AACGTCACTTTTGCGATCAAAA------CGAATACCATGACTAAAGCGAGTCCATCTATTTACG--------CA--------------ACTTCCACCGAAGATC---CCTGGAAAAAGATTACCGACAACTTGCGTTCGCTATCATATAAATTTGA-GTGTTGCAAAAGGATGTC--AAACATC---------TCCAATTCAAAGGAC-------------------GATCACTTAGTATAT-----------------------------------------------------------------AAACTGGAAA--------------TTTGAATCGTCCGGCATCTGGGCCTCAAGAGAAGCTATACTTTTACCTCGAACGATTTGGAGAAAACGCTCAAAAGTGACGCCCSizeHit CountTotal NormTotal
No Reads
droTak1
GAATCTT----------------------------------------------------------------------------------------------------------------------------TATGTCAACTGGCCAAAAAGGTCGACACAATCCAAGGTGAGCTC--AAACGTCAAGCGAGAGACCGATCTGTCAGCCAGAC-------------------ACGCGGTTCGTCTCAGTACCGTTCTGGTTCTCAGCCACGCACTCAATCTCCGA-----------------------------ATGA--------------CACCCGTGCGCAG---TCAGATGACCAGCAAGAGCTTTGTTATTACCATCGTAGCTTTGGAAGTGGTGCACGCAAGTGCA----SizeHit CountTotal NormTotal
No Reads
droYak3
AACGCCCCGTTTGCCATCGGCACATCTTCAACTGCAGTTCCTCCAGCAAATCCGGCTATCTGCG--------CA--------------GTTTCCCCTGCAGATC---CTTTGAAAGAACTTTCAGTCAATTTACGTTCGCTCATGCAAGATGTCACGGCATTGAAAAAGGATGTC--AAACGCA---------TCCAATCACGCAACC-------------------GATCACGCAGTTCATCTCG------------------------------------------------TGGCGCCAGAC--CAGCGGACAA--------------TTCCGGTCAACAGACTTCAGGAGCACAGGAAAATCTTTGTT-TTACCACAAGTGCTTTGGTGACAACGCAAATAAATGCCGACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................ACATCTTCAACTGCAGTTCCTCC...................................................................................................................................................................................................................................................................................................................................................................................2313.00303000000000
.....................ACATCTTCAACTGCAGTTCCTCCAGC................................................................................................................................................................................................................................................................................................................................................................................2613.00303000000000
.................................................................................................................................................CAAGATGTCACGGCATTGAAAAAGGA....................................................................................................................................................................................................................................................26111.6418000000000018
......................................................................................................................................................................................................................................................................................................................................................................................TACCACAAGTGCTTTGGTGACAACGC...............2611.00101000000000
.....................ACATCTTCAACTGCAGTTCCTCCAGCAAA.............................................................................................................................................................................................................................................................................................................................................................................2911.00101000000000
..CGCCCCGTTTGCCATCGGC..........................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.....................ACATCTTCAACTGCAGTTCCTCCAGCC...............................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
.....................ACATCTTCAACTGCAGTTCCTCCAG.................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
....................CACATCTTCAACTGCAGTTCCTCCAG.................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..........................................................................................TTCCCCTGCAGATC---CTTTGAAAGAACT.......................................................................................................................................................................................................................................................................................................2730.67202000000000
..................................................TCCGGCTATCTGCG--------CA--------------GTTTCCCCTG.............................................................................................................................................................................................................................................................................................................................2650.40202000000000
..................................................TCCGGCTATCTGCG--------CA--------------GTTTCCCC...............................................................................................................................................................................................................................................................................................................................2450.40202000000000
......................................................................................................................................................................................................TCACGCAACC-------------------GATCACGCAGTTCATCT...........................................................................................................................................................................2730.33101000000000
.................................................................................................................................................................................................................................................TCTCG------------------------------------------------TGGCGCCAGAC--CAGCGGAC....................................................................................................2430.33101000000000
....................................................................................................................................................................................................................................................................................................................................................ACAGACTTCAGGAGCACAGGAAA....................................................2330.33101000000000
.........TTTGCCATCGGCACATCTTCAACTGC............................................................................................................................................................................................................................................................................................................................................................................................2630.33100100000000
..........................................................................................TTCCCCTGCAGATC---CTTTGAAAGAAC........................................................................................................................................................................................................................................................................................................2630.33100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTGACAACGCAAATAAATGCCGAC.2840.25101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGACAACGCAAATAAATGCCGAC.2740.25101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................TGGTGACAACGCAAATAAATGCCGAC.2640.25101000000000
............................................................................................CCCCTGCAGATC---CTTTGAAAGAACT.......................................................................................................................................................................................................................................................................................................2580.25220000000000
.................................................................................................................................................................................................TCCAATCACGCAACC-------------------GATCACGC....................................................................................................................................................................................2340.25101000000000
.................................................................................................................................................................................................TCCAATCACGCAACC-------------------GATCACGCA...................................................................................................................................................................................2440.25101000000000
.....................................................................................................................................................................................................................................TCACGCAGTTCATCTCG------------------------------------------------TGGCGCC..................................................................................................................2440.25100100000000
....................................................................................................................................................................................................AATCACGCAACC-------------------GATCACGCAGTT................................................................................................................................................................................2440.25101000000000
..........................................................................................................................................................................................................................................................................................................GCCAGAC--CAGCGGACAA--------------TTCCGGT.............................................................................2440.25100100000000
.................................................................................................................................................................................................TCCAATCACGCAACC-------------------GATCACGCAGT.................................................................................................................................................................................2640.25101000000000
.............................................................................................................................................................................TC--AAACGCA---------TCCAATCACGCAACC-------------------GAT.........................................................................................................................................................................................2740.25100100000000
..............................................................................................................................................................................C--AAACGCA---------TCCAATCACGCAACC-------------------GA..........................................................................................................................................................................................2540.25101000000000
...........................................................................................................................................................................TGTC--AAACGCA---------TCCAATCACGCAACC-------------------GA..........................................................................................................................................................................................2840.25101000000000
..............................................................................................................................................................................................................................................TCATCTCG------------------------------------------------TGGCGCCAGAC--CAGCC.......................................................................................................2460.17101000000000
.........................................................................................................................................CGCTCATGCAAGATGTCACGGC................................................................................................................................................................................................................................................................22120.17202000000000
......................................................................................................................................................TGTCACGGCATTGAAAAAGGATGTC--..............................................................................................................................................................................................................................................25100.10101000000000
..................................................................................................................................................AAGATGTCACGGCATTGAAAAAGGATG..................................................................................................................................................................................................................................................27110.09101000000000
.........................................................................................................................................CGCTCATGCAAGATGTCACGGCA...............................................................................................................................................................................................................................................................23120.08101000000000
.........................................................................................................................................CGCTCATGCAAGATGTCACGGCAT..............................................................................................................................................................................................................................................................24120.08101000000000
.........................................................................................................................................CGCTCATGCAAGATGTCACGGCATT.............................................................................................................................................................................................................................................................25120.08101000000000
droEre2
AACGTCTCGTTTGCCATCGGCACATCACCAACTTTTGTTCCTCCTGCAAATCCGGCTTTCTGTG--------CA--------------GTTTCCCCTGCAGATC---CTTTGAAAGAACTTTCCGACAACTTACGTTCGCTCATGCAAGATGTCACGGCATTGAAAAAGGATGTC--AAGCGCA---------ACCAATCACGCAACA-------------------GATCACGCTGTTCATCTTG------------------------------------------------TGGCGCCAGAC--CAGCGGACAA--------------TGCCGGTCAACAGACTTCCAGAGCACAGGAAAATCTTTGTTTCTACCACAAGCGCTTTGGTGACAACGCAAATAAATGCCGACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 03:51 AM