ID:

dps_2242

 Coordinate:

Unknown_group_78:7981-8131 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.1 -12.6 -12.5 -12.1

Flybase annnotation

exon [dpse_GLEANR_7200:10]; CDS [Dpse\GA13024-cds]; intron [Dpse\GA13024-in]

No Repeatable elements found

mature
  1. Unknown_group_199:18359-18383 +
  2. Unknown_group_139:5970-5994 +
  3. dps_2242  Unknown_group_78:8008-8032 -
  4. XL_group1e:2083362-2083386 +
  5. Unknown_group_88:637-661 +
  6. Unknown_group_16:20903-20927 -
  7. Unknown_group_779:1215-1239 +
  8. Unknown_group_628:5127-5151 +
  9. Unknown_group_48:21867-21891 +
  10. Unknown_group_125:5546-5570 +
  11. 3:2548068-2548092 -
  12. 2:871435-871459 +
  13. Unknown_group_180:35138-35162 +
  14. Unknown_group_243:16580-16604 -
  15. Unknown_group_243:17153-17177 +
  16. 4_group2:1057797-1057821 -
  17. Unknown_singleton_1599:3998-4022 +
  18. Unknown_singleton_1974:483-507 +
  19. Unknown_singleton_2692:738-762 -
  20. Unknown_singleton_2633:295-319 +
  21. Unknown_group_23:55473-55497 -
  22. 3:17723697-17723721 -
  23. Unknown_group_316:1106-1130 -
  24. XL_group1a:447488-447512 -
  25. Unknown_singleton_1599:3295-3319 -
star
  1. Unknown_group_493:2129-2152 +
  2. Unknown_group_199:18267-18290 +
  3. Unknown_group_381:5801-5824 +
  4. Unknown_group_380:3870-3893 +
  5. Unknown_group_88:545-568 +
  6. Unknown_group_301:23775-23798 +
  7. Unknown_group_7:115564-115587 +
  8. Unknown_singleton_412:1271-1294 +
  9. 2:871343-871366 +
  10. Unknown_group_513:3866-3889 +
  11. Unknown_group_166:18288-18311 +
  12. 4_group1:3713771-3713794 +
  13. Unknown_group_445:9375-9398 +
  14. XR_group6:1005641-1005664 +
  15. Unknown_group_625:4521-4544 +
  16. Unknown_singleton_1335:245-268 +
  17. Unknown_group_463:4510-4533 +
  18. Unknown_singleton_2692:1208-1231 +
  19. Unknown_singleton_65:3535-3558 +
  20. Unknown_singleton_2028:576-599 +
  21. Unknown_group_2:49348-49371 -
  22. Unknown_group_429:12399-12422 -
  23. Unknown_group_139:8952-8975 -
  24. dps_2242  Unknown_group_78:8101-8124 -
  25. Unknown_group_257:13248-13271 -
  26. Unknown_group_147:14746-14769 -
  27. Unknown_group_534:5106-5129 -
  28. Unknown_group_564:2712-2735 -
  29. Unknown_group_48:21233-21256 -
  30. Unknown_group_125:5074-5097 -
  31. Unknown_group_59:52073-52096 -
  32. Unknown_group_154:34597-34620 -
  33. Unknown_group_704:7792-7815 -
  34. Unknown_group_243:16673-16696 -
  35. Unknown_singleton_1624:3494-3517 -
  36. Unknown_singleton_587:1259-1282 -
  37. Unknown_singleton_3117:2314-2337 -
  38. Unknown_singleton_3806:560-583 -
  39. Unknown_singleton_1660:1620-1643 -
  40. Unknown_group_596:12928-12951 -
  41. Unknown_group_100:7373-7396 +
  42. Unknown_group_43:10114-10137 -
  43. Unknown_group_24:109685-109708 -
  44. Unknown_group_75:21160-21183 -
  45. Unknown_group_316:1199-1222 -
  46. XL_group1a:447581-447604 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------####################------------------------------
CACCGACTCGACGCTGACCGAGGCATTGACGAAGCCGAGTAGCATTTCGGAAGCGAAGGTAGCGTAAAAGAGAATTGAAGTAATAGCCCCGCGCGCCCTTACCATGAAGCGTCAAAAGAAAATTGAAAAAGAATTTGTTCCTCATGCAACATCTTGGTATTGTATAGTCTTTGATAATACTCTCTTCTTTCTTTCTTTTAGACGGGGTAGGTCCATACTAGTATCGTCTTGATCTGCTATTTCAGAAAATC
*********************************************************.................((.(((..........((.......(((((.((.((((.......(((((.......))))).......))))....)).))))).......))))).))***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 SRR902011
testis
 V112
male body		 M059
embryo
 GSM343916
embryo
 M022
male body		 GSM444067
head
 M062
head
 SRR902012
CNS imaginal disc
.....................................................................................................................................................CATCTTGGTATTGTATAGTCTTTGA............................................................................. 25 0 20 6.40 128 0 117 0 0 0 7 3 1 0 0
.......................................................................................................................................................TCTTGGTATTGTATAGTCTTTGATA........................................................................... 25 0 13 3.15 41 5 19 17 0 0 0 0 0 0 0
.......................................................................................................................................................TCTTGGTATTGTATAGTCTTTGA............................................................................. 23 0 20 2.30 46 26 20 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................TCTTTCTTTTAGACGGGGTAGGT....................................... 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGAGAATTGAAGT.......................................................................................................................................................................... 24 0 20 1.90 38 0 24 0 9 5 0 0 0 0 0
.......................................................................................................................................................TCTTGGTATTGTATAGTCTTTGATAA.......................................................................... 26 0 5 1.80 9 3 5 1 0 0 0 0 0 0 0
..........................................................................................................................................TCCTCATGCAACATCTTGGTATTG......................................................................................... 24 0 20 1.20 24 24 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTCTTTGATA........................................................................... 27 0 12 1.08 13 7 3 3 0 0 0 0 0 0 0
....................................................................................................................................................................................TCTCTTCTTTCTTTCTTTTAGACGG.............................................. 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTC.................................................................................. 20 0 20 0.95 19 19 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................TTGGTATTGTATAGTCTTTG.............................................................................. 20 0 20 0.95 19 12 6 1 0 0 0 0 0 0 0
..........................................................................................................................................................TGGTATTGTATAGTCTTTGATAACAC....................................................................... 26 1 4 0.75 3 3 0 0 0 0 0 0 0 0 0
..........................................................................................................................................TCCTCATGCAACATCTTGGTATTGT........................................................................................ 25 0 20 0.70 14 14 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGGTATTGTATAGTCTTTGAT............................................................................ 21 0 20 0.65 13 10 0 1 1 1 0 0 0 0 0
...........................................................................................................................................CCTCATGCAACATCTTGGTATTGTA....................................................................................... 25 0 20 0.65 13 13 0 0 0 0 0 0 0 0 0
........CGACGCTGACCGAGGCATTGACGA........................................................................................................................................................................................................................... 24 0 20 0.60 12 12 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTCTTTGATAA.......................................................................... 28 0 4 0.50 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................TACCATGGAGCGTTAAAAGAAAA................................................................................................................................. 23 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0
......................................................................................CCGCGCGCGGCCTTACCAT.................................................................................................................................................. 19 2 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TTCCTCATGCAACATCTTGGTA............................................................................................ 22 0 20 0.45 9 9 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTCTAT............................................................................... 23 1 20 0.45 9 9 0 0 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGAGAATTGAAGTAA........................................................................................................................................................................ 26 0 20 0.40 8 0 2 5 1 0 0 0 0 0 0
..........................................................................................................................................................TGGTATTGTATAGTCTTTGATAACACA...................................................................... 27 2 10 0.40 4 4 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTCTTTGAT............................................................................ 26 0 20 0.40 8 4 0 4 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGAGAATTGAAG........................................................................................................................................................................... 23 0 20 0.40 8 0 0 0 7 0 1 0 0 0 0
................................................................................................................................................TGCAACATCTTGGTATTGTATAGTCT................................................................................. 26 0 20 0.40 8 0 8 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGGTATTGTATAGTCTTTGATAATA........................................................................ 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
........CGACGCTGACCGAGGCATTGACGAAGC........................................................................................................................................................................................................................ 27 0 20 0.30 6 0 6 0 0 0 0 0 0 0 0
.......................................................................................................................................TGTTCCTCATGCAACATCTTGG.............................................................................................. 22 0 20 0.30 6 6 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTCTATGA............................................................................. 25 1 20 0.25 5 3 0 0 0 2 0 0 0 0 0
..........................................................................................................................................................TGCTATTGTATAGTCTTTGATAACAC....................................................................... 26 2 4 0.25 1 0 0 0 0 1 0 0 0 0 0
........CGACTCTGACCGAGGCATTGACGA........................................................................................................................................................................................................................... 24 1 20 0.25 5 0 5 0 0 0 0 0 0 0 0
.....................................................................................................................................................CGTCTTGGTATTGTATAGTCTTTGA............................................................................. 25 1 20 0.25 5 0 5 0 0 0 0 0 0 0 0
...........................................................................................................................................................GGTATTGTATAGTCTTTGATAACAC....................................................................... 25 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGGTATTGTATAGTCTTTGATAA.......................................................................... 23 0 5 0.20 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AACATCTTGGTATTGTATAGTT.................................................................................. 22 1 20 0.20 4 0 0 4 0 0 0 0 0 0 0
.........................................................................................................................................TTCCTCATGCAACATCTTGGT............................................................................................. 21 0 20 0.20 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTTGGTATTGTATAGT................................................................................... 17 0 20 0.20 4 0 0 4 0 0 0 0 0 0 0
........................................................................................................................................................CTTGGTATTGTATAGTCTTTGATA........................................................................... 24 0 13 0.15 2 2 0 0 0 0 0 0 0 0 0
...........................................................TAGCGTAAAAGAGAATTGAAGTAA........................................................................................................................................................................ 24 0 20 0.15 3 0 0 3 0 0 0 0 0 0 0
...........................................................................TGAAGTAATAGCCCCGCGCGCC.......................................................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CGTCTTGGTGTTGTATAGTCTTTGA............................................................................. 25 2 20 0.15 3 0 3 0 0 0 0 0 0 0 0
..............TGACCGAGGCATTGACGAAGC........................................................................................................................................................................................................................ 21 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0
.......TCGACGCTGACCGAGGCATTGA.............................................................................................................................................................................................................................. 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0
........CAACGCTGACCGAGTCATTGAC............................................................................................................................................................................................................................. 22 2 20 0.15 3 3 0 0 0 0 0 0 0 0 0
.............CTGACCGAGGCATTGACGAAGCCGAG.................................................................................................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0
................................................................................................................................................TGCAACATCTTGGTATTGTATAGTCTT................................................................................ 27 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0
..............TGACCGAGGCATTGACGAAGCC....................................................................................................................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGAGAATTGAAAA.......................................................................................................................................................................... 24 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTTGGTATTGTATAGTCTT................................................................................ 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
...................................................................................................................................................AACATCTTGGTATTGTATAG.................................................................................... 20 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0
......................................................................................................................................TTGTTCCTCATGTAACTTCTTGGTA............................................................................................ 25 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTCTTC............................................................................... 23 1 20 0.10 2 0 0 0 0 2 0 0 0 0 0
.......TCAACGCTGACCGAGTCATTGACGA........................................................................................................................................................................................................................... 25 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.......................CATTGACGAAGCCGAGTAGCA............................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................TTTGTTCCTCATGTAACTTCTTGG.............................................................................................. 24 2 20 0.10 2 0 2 0 0 0 0 0 0 0 0
...........................................................TAGCGTAAAAGAGAATTGAAGTAAA....................................................................................................................................................................... 25 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................GGTATTGTATAGTCTTTGATAACACA...................................................................... 26 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
........CAACGCTGACCGAGTCATTGACGAAG......................................................................................................................................................................................................................... 26 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0
........CGACGCTGACCGAGGCATTGACGAAG......................................................................................................................................................................................................................... 26 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0
....................................................................................................................................................ACATCTTGGTATTGTATAGTCTTTG.............................................................................. 25 0 20 0.10 2 0 0 2 0 0 0 0 0 0 0
......................................................................................................................................TTGTTCCTCATGTAACTTCTTGG.............................................................................................. 23 2 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTTGGTATTGTATAGTCTTGTA............................................................................. 23 2 20 0.10 2 0 0 2 0 0 0 0 0 0 0
.....................................................................................................................................................CTTCTTGGTATTGTATAGTCTTT............................................................................... 23 1 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGAGAATTGAAGTA......................................................................................................................................................................... 25 0 20 0.10 2 0 0 0 2 0 0 0 0 0 0
..........................................................................................................................................................TGGTATTGTATATTCTTTGATAACACA...................................................................... 27 3 10 0.10 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................ATCTTGGTATTGTATAGTCTTTGATA........................................................................... 26 0 13 0.08 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTCTTTGATCA.......................................................................... 28 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................ATCTTGGTATTGAATAGTCTTTGATA........................................................................... 26 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTTGGTATTGAATAGTCTTTGATA........................................................................... 25 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGGTATTGTATAGTCTTTGATA........................................................................... 22 0 16 0.06 1 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................GGTATTGTATAGTCTTTGATA........................................................................... 21 0 17 0.06 1 1 0 0 0 0 0 0 0 0 0
......................................................TAAGGAAGCGTAAAAGAGAATTGAA............................................................................................................................................................................ 25 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTCTATAGTCTATG.............................................................................. 24 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0
...............GACCGAGGCATTGACGAAGCCGA..................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TGAAGTAATAGCCCCGCGCGCCC......................................................................................................................................................... 23 0 20 0.05 1 0 0 0 0 0 0 0 0 1 0
.........GGCGCTGACCGAGGCATTGACGAAG......................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTTTTTG.............................................................................. 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
............GCTGACCGAGGCATTGACGAAGCC....................................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGCATAGTCTTTGA............................................................................. 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................CCATCTTGGTATTGTATAGTCTTTGA............................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................TTGACGAAGCCGAGTAGCATTTC........................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................................ATTGAAGTAATAGCCCCGCGCGCC.......................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAGGAGAATTGAAGT.......................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CGTCTTGGTATTGTATGGTCTTTGA............................................................................. 25 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0
...........CGCTGACCGAGGCATTGACGAAGC........................................................................................................................................................................................................................ 24 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
.......................................................................................................................................TGTTCCTCATGTAACTTCTTGGT............................................................................................. 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGAGAATTGAAA........................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGACAATTGAAGTAA........................................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................GGCAGCGTAAAAGAGAATTGAAGT.......................................................................................................................................................................... 24 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
...........................................................TAGCGTAAAAGAGAATTGAAGTAAT....................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGAGAATTGAAGAAA........................................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................TTGTTCCTCATGCAACATCTTGGTAC........................................................................................... 26 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
............TCTGACCGAGGCATTGACGAAGC........................................................................................................................................................................................................................ 23 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGAGAATTGAA............................................................................................................................................................................ 22 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................GTTCCTCATGCAACATCTTGGT............................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
............TCTGACCGAGGCATTGACGAAGCCGA..................................................................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................TTGAAAAAGAATTTGTTCCTCA........................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGAGAGTTGAAG........................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......TCGACGCTGACCGAGGCATTGACGAAG......................................................................................................................................................................................................................... 27 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTCTTTG.............................................................................. 24 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1
...............................................................GTAAAAGAGAATTGAAGT.......................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................TAGCGTAAAAGAGAATTGAAGTAATAGC.................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................TAGCGTAAAAGAGAATTGAAGT.......................................................................................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0
................................................................TAAAAGAGAATTGAAGTAATAGCC................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........CGCTGACCGAGGCATTCACGAAGC........................................................................................................................................................................................................................ 24 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0
.........................................................GGTAGCGTAAAAGAGAATTGAAGTAAT....................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
......................................................GATGGTAGCGTAAAAGAGAATT............................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 1 0 0 0 0 0 0
..........................................................GTAGCGTAAAAGAGAATTGAAGTAA........................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGTATAGTCTTTTA............................................................................. 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.........................................................GATAGCGTAAAAGAGAATTGAAG........................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
............GCTGACCGAGGCATTGACGAAGCCGA..................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................TGCAGCATCTTGGTATTGTATAGTC.................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
........................................................................AATTGAAGTAATAGCCCCGCGCG............................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................................TGAAGTAATAGCCCCGCGTGCCC......................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTTGGTATTGTATAGTCGGC............................................................................... 21 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................ATCTTGGTATTGTATGGTCTTTGA............................................................................. 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TCTTGGTATTGTATAGTCTTTGAT............................................................................ 24 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................TCCTCATTCAACATCTTGGTATTGTA....................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCCTGGTATTGTATAGTCTTTGA............................................................................. 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
........................................................TGGTAGCGTAAAAGAGAATTGAA............................................................................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................TGGTATTGTATAGTCTTTGA............................................................................. 20 0 20 0.05 1 0 0 0 0 0 0 0 1 0 0
.........................................................GGTAGCGTAAAACAGAATTGAAGT.......................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................AGAATTTGTTCCTCATGCAACAT................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................TGCAACATCTTGGTATTGTATAGTCC................................................................................. 26 1 20 0.05 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................TCATGCAACATCTTGGTATTGTAT...................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CCTCATGCAACATCTTGGTAT........................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTGTTGTATGGTCTTTGA............................................................................. 25 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
........CGACGCTGACCGAGGCATTGAA............................................................................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATGTTGGTATTGTATAGTCTTTGA............................................................................. 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
........................................................CGGTAGCGTAAAAGAGAATTGAAGT.......................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CATCTTGGTATTGCATAGTCA................................................................................. 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..............TGACCGAGGCATTGGCGAAGC........................................................................................................................................................................................................................ 21 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................GTATTGTATAGTCTTTGATAA.......................................................................... 21 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.....................................................................GAGAATTGAAGTAATAGCCCCGCGC............................................................................................................................................................. 25 0 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

GTGGCTGAGCTGCGACTGGCTCCGTAACTGCTTCGGCTCATCGTAAAGCCTTCGCTTCCATCGCATTTTCTCTTAACTTCATTATCGGGGCGCGCGGGAATGGTACTTCGCAGTTTTCTTTTAACTTTTTCTTAAACAAGGAGTACGTTGTAGAACCATAACATATCAGAAACTATTATGAGAGAAGAAAGAAAGAAAATCTGCCCCATCCAGGTATGATCATAGCAGAACTAGACGATAAAGTCTTTTAG
*****************************************************************************.................((.(((..........((.......(((((.((.((((.......(((((.......))))).......))))....)).))))).......))))).))********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902011
testis
 V112
male body		 M059
embryo
 SRR902010
ovaries
 GSM343916
embryo
 M062
head
 GSM444067
head
 M022
male body
........................................................................................................................................CAAGGAGTACGTTGTAGAACCAT............................................................................................ 23 0 20 19.65 393 300 44 23 21 0 4 0 1 0
.......................................................................................................................................ACAAGGAGTACGTTGTAGAACCAT............................................................................................ 24 0 20 16.80 336 284 0 33 18 0 0 1 0 0
......................................................................................................................................AACAAGGAGTACGTTGTAGAACCAT............................................................................................ 25 0 20 12.85 257 202 27 28 0 0 0 0 0 0
.........................................................................................................................................AAGGAGTACGTTGTAGAACCAT............................................................................................ 22 0 20 7.30 146 96 26 14 7 3 0 0 0 0
....................................................................................................................................TAAACAAGGAGTACGTTGTAGAACCAT............................................................................................ 27 0 20 6.10 122 0 0 77 32 12 0 0 0 1
..........................................................................................................................................AGGAGTACGTTGTAGAACCATAACAT....................................................................................... 26 0 20 4.25 85 84 0 0 0 0 1 0 0 0
.....................................................................................................................................AAACAAGGAGTACATTGAAGAACCAT............................................................................................ 26 2 20 3.90 78 77 0 1 0 0 0 0 0 0
..........................................................................................................................................AGGAGTACGTTGTAGAACCAT............................................................................................ 21 0 20 3.85 77 65 0 11 0 1 0 0 0 0
.....................................................................................................................................AAACAAGGAGTACGTTGTAGAACCAT............................................................................................ 26 0 20 3.35 67 0 63 0 0 0 4 0 0 0
.................GGCTCCGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 27 0 20 3.30 66 49 13 0 0 4 0 0 0 0
.................GGCTCCGTAACTGCTTCGGCTCAT.................................................................................................................................................................................................................. 24 0 20 3.20 64 45 17 2 0 0 0 0 0 0
..............................................................................................CGGGAATGGTACTTCGCAGTT........................................................................................................................................ 21 0 2 3.00 6 5 0 1 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCAT............................................................................................ 20 0 20 2.60 52 49 0 0 0 0 3 0 0 0
.........................................................................................................................................AAGGAGTACGTTGTAGAACCATAACAT....................................................................................... 27 0 20 2.40 48 47 0 1 0 0 0 0 0 0
.................................................................................................AAATGGTACTTCGCAGTT........................................................................................................................................ 18 1 3 2.00 6 6 0 0 0 0 0 0 0 0
....................TCCGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 24 0 20 2.00 40 36 0 0 0 0 4 0 0 0
..........................................................................................................................................AGGAGTACGTTGTAGAACCATA........................................................................................... 22 0 20 1.65 33 30 0 3 0 0 0 0 0 0
........................................................................................................................................CAAGGAGTACGTTGTAGAACCATAA.......................................................................................... 25 0 20 1.55 31 27 2 0 0 2 0 0 0 0
............................................................................................................................................GAGTACGTTGTAGAACCATAACAT....................................................................................... 24 0 20 1.50 30 27 1 0 0 2 0 0 0 0
.......AGCTGCGACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 26 0 20 1.15 23 10 1 10 0 0 2 0 0 0
....................................................................................................................................TAAACAAGGAGTACGTTGTAGAACCA............................................................................................. 26 0 20 1.10 22 22 0 0 0 0 0 0 0 0
......................................................................................................................................AACAAGGAGTACGTTGTAGAACCATAA.......................................................................................... 27 0 20 1.10 22 17 0 0 0 5 0 0 0 0
.....................CCGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 23 0 20 1.10 22 20 0 2 0 0 0 0 0 0
......................................................................................................................................AACAAGGAGTACATTGAAGAACCAT............................................................................................ 25 2 20 1.05 21 20 0 0 1 0 0 0 0 0
.........................AACTGCTTCGGCTCATCGTAAAGCCT........................................................................................................................................................................................................ 26 0 20 1.05 21 4 17 0 0 0 0 0 0 0
............................................................................................................................................................................................................................CATAGCAGAACTAGACGATAAAGTCT..... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................AAAGCCTTCGCTTCCATCGCATT........................................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCATAACAT....................................................................................... 25 0 20 0.95 19 0 0 0 12 0 7 0 0 0
......................CGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 22 0 20 0.85 17 14 0 0 0 1 2 0 0 0
..........TGCGACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 23 0 20 0.85 17 15 0 2 0 0 0 0 0 0
............................................................................................................................................GAGTACGTTGTAGAACCATA........................................................................................... 20 0 20 0.80 16 16 0 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACATTGAAGAACCATAACAT....................................................................................... 25 2 20 0.80 16 14 0 0 2 0 0 0 0 0
.........CTGCGACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 23 0 20 0.75 15 14 0 1 0 0 0 0 0 0
........................................................................................................................................CAAGGAGTACATTGAAGAACCATAA.......................................................................................... 25 2 20 0.75 15 13 0 0 0 2 0 0 0 0
.......................................................................................................................................CCAAGGAGTACGTTGTAGAACCAT............................................................................................ 24 1 20 0.70 14 3 3 8 0 0 0 0 0 0
GTGGCTGAGCTGCGACTGGCTCCGT.................................................................................................................................................................................................................................. 25 0 20 0.65 13 10 1 0 0 2 0 0 0 0
.............................................................CGCATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 24 0 20 0.60 12 9 0 0 3 0 0 0 0 0
..................GCTCCGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 26 0 20 0.55 11 11 0 0 0 0 0 0 0 0
.....................CCGTAACTGCTTCGGCTCATCGTAAA............................................................................................................................................................................................................ 26 0 20 0.55 11 11 0 0 0 0 0 0 0 0
.......AGCTGCGACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 25 0 20 0.55 11 11 0 0 0 0 0 0 0 0
.........CTGCGACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 24 0 20 0.55 11 8 0 2 1 0 0 0 0 0
..............................................................................................CGGGAATGGTACTTCGCAGT......................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
............................................................................................CGCGGGATTGGTACGTCGCAGTT........................................................................................................................................ 23 2 2 0.50 1 0 0 0 0 0 1 0 0 0
................................................................................................GGAATGGTACTTCGCAGT......................................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0 0 0 0 0
..............................................................................................TGGGAATGGTACTTCGCAGTT........................................................................................................................................ 21 1 2 0.50 1 0 0 1 0 0 0 0 0 0
...............CTGGCTCCGTAACTGCTTCGGCT..................................................................................................................................................................................................................... 23 0 20 0.50 10 10 0 0 0 0 0 0 0 0
.......................................................................................................TACTTCGCAGTTTTCTTTTAA............................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0
...............................................................................................GGGAATGGTACTTCGCAGTT........................................................................................................................................ 20 0 2 0.50 1 1 0 0 0 0 0 0 0 0
......GAGCTGCGACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 27 0 20 0.50 10 8 2 0 0 0 0 0 0 0
...........................................................................................GCGCGGGAATGGTACTTCGCAGTT........................................................................................................................................ 24 0 2 0.50 1 1 0 0 0 0 0 0 0 0
.....TGAGCTGCGACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 27 0 20 0.50 10 9 0 1 0 0 0 0 0 0
...............................................................................................TGGAATGGTACTTCGCAGTT........................................................................................................................................ 20 1 2 0.50 1 1 0 0 0 0 0 0 0 0
..........TGCGACTGGCTCCGTAACTGCTTCGGCT..................................................................................................................................................................................................................... 28 0 20 0.45 9 8 0 0 1 0 0 0 0 0
........................................................................................................................................AAAGGAGTACGTTGTAGAACCAT............................................................................................ 23 1 20 0.40 8 8 0 0 0 0 0 0 0 0
............CGACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 21 0 20 0.40 8 7 0 1 0 0 0 0 0 0
.........................................................................................................................................AAGGAGTACGTTGTAGAACCATAACA........................................................................................ 26 0 20 0.40 8 8 0 0 0 0 0 0 0 0
......GAGCTGCGACTGGCTCCGTAACT.............................................................................................................................................................................................................................. 23 0 20 0.40 8 4 3 0 0 1 0 0 0 0
.......................GTAACTGCTTCGGCTCATCGTAAA............................................................................................................................................................................................................ 24 0 20 0.40 8 8 0 0 0 0 0 0 0 0
...........GCGACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 22 0 20 0.35 7 6 1 0 0 0 0 0 0 0
......................................................................................................................................AACAAGGAGTACATTGAAGAACCATAA.......................................................................................... 27 2 20 0.35 7 7 0 0 0 0 0 0 0 0
............CGACTGGCTCCGTAACTGCTTCGGCT..................................................................................................................................................................................................................... 26 0 20 0.35 7 4 1 0 0 2 0 0 0 0
........................................................................................................................................CAAGGAGTACGTTGTAGAACCATA........................................................................................... 24 0 20 0.35 7 4 0 0 1 2 0 0 0 0
..............................................................................................CGGGAATGGTACTTCGCAGTTGA...................................................................................................................................... 23 2 3 0.33 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................GAGTACGTTGTAGAACCAT............................................................................................ 19 0 20 0.30 6 0 4 2 0 0 0 0 0 0
.......................GTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 21 0 20 0.30 6 5 1 0 0 0 0 0 0 0
...................CTCCGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 25 0 20 0.30 6 0 2 3 0 0 1 0 0 0
.........................................................CCATCGCATTTTCTCTTAACTTCAT......................................................................................................................................................................... 25 0 20 0.30 6 4 0 0 0 2 0 0 0 0
.....................................................................................................................................AAACAAGGAGTACGTTGTAGAACCGT............................................................................................ 26 1 20 0.30 6 6 0 0 0 0 0 0 0 0
.....TGAGCTGCGACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 28 0 20 0.30 6 3 0 3 0 0 0 0 0 0
....................................................................................................................................AAAACAAGGAGTACATTGAAGAACCAT............................................................................................ 27 3 20 0.30 6 6 0 0 0 0 0 0 0 0
............................................................................................................................................GAGTACGTTGTAGAACCATAA.......................................................................................... 21 0 20 0.30 6 0 4 0 0 0 2 0 0 0
...............................................................................................................................................TACGTTGTAGAACCATAACAT....................................................................................... 21 0 20 0.25 5 4 0 1 0 0 0 0 0 0
.........................................................................................................................................AAGGAGTACGTTGTAGAACCATAA.......................................................................................... 24 0 20 0.25 5 0 4 1 0 0 0 0 0 0
...........................................................................................................................................GGAGTACATTGAAGAACCATAACA........................................................................................ 24 2 20 0.25 5 5 0 0 0 0 0 0 0 0
........................................................................................................................................AAAGGAGTACGTTGTAGAACCATAA.......................................................................................... 25 1 20 0.25 5 5 0 0 0 0 0 0 0 0
................................................................................................................................................ACGTTGTAGAACCGTAACATA...................................................................................... 21 1 20 0.25 5 5 0 0 0 0 0 0 0 0
.....TGAGCTGCGACTGGCTCCGTAACT.............................................................................................................................................................................................................................. 24 0 20 0.25 5 5 0 0 0 0 0 0 0 0
.............GACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 20 0 20 0.25 5 5 0 0 0 0 0 0 0 0
...........GCGACTGGCTCCGTAACTGCTTCGGCT..................................................................................................................................................................................................................... 27 0 20 0.25 5 5 0 0 0 0 0 0 0 0
.......AGCTGCGACTGGCTCCGTAACT.............................................................................................................................................................................................................................. 22 0 20 0.25 5 0 0 3 0 2 0 0 0 0
....................................................................................................................................TAAACAAGGAGTACGTTGTAGAACAAT............................................................................................ 27 1 20 0.20 4 0 0 0 4 0 0 0 0 0
........................................................TCCATCGCATTTTCTCTTAACTTCATT........................................................................................................................................................................ 27 0 20 0.20 4 0 3 0 0 1 0 0 0 0
......GAGCTGCGACTGGCTCCGTAAC............................................................................................................................................................................................................................... 22 0 20 0.20 4 2 2 0 0 0 0 0 0 0
........................................................TCCATCGCATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 29 0 20 0.20 4 0 1 0 3 0 0 0 0 0
...........................................................................................................................................GGAGTACATTGAAGAACCATAA.......................................................................................... 22 2 20 0.20 4 4 0 0 0 0 0 0 0 0
..........................................................................................................................................AGGAGTACGTTGTAGAACCATAA.......................................................................................... 23 0 20 0.20 4 0 2 0 2 0 0 0 0 0
........................................................................................................................................AAAGGAGTACGTTGTAGAACCATAACAT....................................................................................... 28 1 20 0.20 4 4 0 0 0 0 0 0 0 0
.................GGCTCCGTAACTGCTTCGGCTCA................................................................................................................................................................................................................... 23 0 20 0.20 4 4 0 0 0 0 0 0 0 0
....................................................................................................................................AAAACAAGGAGTACGTTGTAGAACCAT............................................................................................ 27 1 20 0.20 4 0 2 0 2 0 0 0 0 0
......................................................................................................................................AACAAGGAGTACATTGAAGAACCA............................................................................................. 24 2 20 0.20 4 4 0 0 0 0 0 0 0 0
..........TGCGACTGGCTCCGTAACTGC............................................................................................................................................................................................................................ 21 0 20 0.20 4 3 0 0 0 0 0 0 1 0
...............CTGGCTCCGTAACTGCTTCGGCTC.................................................................................................................................................................................................................... 24 0 20 0.20 4 3 1 0 0 0 0 0 0 0
.....................................................................................................................................AAACAAGGAGTACATTGAAGAACCA............................................................................................. 25 2 20 0.20 4 4 0 0 0 0 0 0 0 0
............................................................................................................................................GAGTACGTTGTAGAACCATAACA........................................................................................ 23 0 20 0.20 4 4 0 0 0 0 0 0 0 0
........................................................TCCATCGCATTTTCTCTTAACTTCAT......................................................................................................................................................................... 26 0 20 0.20 4 0 4 0 0 0 0 0 0 0
..........................................................CATCGCATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 27 0 20 0.15 3 0 1 0 0 2 0 0 0 0
.................GGCTCAGTAACTGCTTCGGCTCAT.................................................................................................................................................................................................................. 24 1 20 0.15 3 3 0 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCATAA.......................................................................................... 22 0 20 0.15 3 0 0 0 0 2 1 0 0 0
....CTGAGCTGCGACTGGCTCCGTAACT.............................................................................................................................................................................................................................. 25 0 20 0.15 3 3 0 0 0 0 0 0 0 0
....................TCCGTAACTGCTTCGGCTCATCGTAAA............................................................................................................................................................................................................ 27 0 20 0.15 3 3 0 0 0 0 0 0 0 0
........................................................................................................................................CAAGGAGTACATTGAAGAACCATAACAT....................................................................................... 28 2 20 0.15 3 3 0 0 0 0 0 0 0 0
.......................GTAACTGCTTCGGCTCATCGTAAAGCC......................................................................................................................................................................................................... 27 0 20 0.15 3 2 1 0 0 0 0 0 0 0
...............................................................CATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0
............................................................................................................................................GAGTACGTTGTAGAACCATAAC......................................................................................... 22 0 20 0.15 3 3 0 0 0 0 0 0 0 0
......................................................................................................................................AACAAGGAGTACGTTGTAGAACCGT............................................................................................ 25 1 20 0.15 3 3 0 0 0 0 0 0 0 0
......................................................................................................................................AACAAGGAGTACGTTGTAGAACCATA........................................................................................... 26 0 20 0.15 3 3 0 0 0 0 0 0 0 0
..............................................................GCATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 23 0 20 0.15 3 0 0 0 0 3 0 0 0 0
.....................................................................................................................................AAACAAGGAGTACGTTGTAGAACCATAA.......................................................................................... 28 0 20 0.15 3 0 3 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCGTAA.......................................................................................... 22 1 20 0.15 3 3 0 0 0 0 0 0 0 0
..............ACTGGCTCCGTAACTGCTTCGGCTCAT.................................................................................................................................................................................................................. 27 0 20 0.15 3 3 0 0 0 0 0 0 0 0
...................................................................................................................................TTAAACAAGGAGTACGTTGTAGAACCAT............................................................................................ 28 0 20 0.15 3 0 0 2 1 0 0 0 0 0
.........................................................................................................................................................AACCATAACATATCAGAAAC.............................................................................. 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
....................CCCGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 24 1 20 0.10 2 0 0 0 2 0 0 0 0 0
..........................................................................................................................................AGGAGTACATTGTAGAACCATAA.......................................................................................... 23 1 20 0.10 2 0 1 1 0 0 0 0 0 0
.......AGCTGAGACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 26 1 20 0.10 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................................AAGGAGTACATTGAAGAACCATAACAT....................................................................................... 27 2 20 0.10 2 0 0 0 0 2 0 0 0 0
...........GAGACTGGCTCCGTAACTGCTTCGGCT..................................................................................................................................................................................................................... 27 1 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................................TCGCATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 25 0 20 0.10 2 0 1 0 1 0 0 0 0 0
.......AGCTGCGACTGGCTCCGTAACTGCTTC......................................................................................................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...............CTGGCTCCGTAACTGCTTCGGCTCAT.................................................................................................................................................................................................................. 26 0 20 0.10 2 0 0 1 0 0 0 0 0 1
...............CTGGCTCCGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 29 0 20 0.10 2 0 0 1 0 0 0 1 0 0
........................................................................................................................................CAAGGAGTACGTTGTAGAAC............................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..GGCTGAGCTGCGACTGGCTC..................................................................................................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................ACAAGGAGTACGTTGTAGAAC............................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................TAACTGCTTCGGCTCATCGTAAA............................................................................................................................................................................................................ 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
GTGGCTGAGTTGCGACTGGCT...................................................................................................................................................................................................................................... 21 1 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCATAACATA...................................................................................... 26 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................................AAGGAGTACGTTGTAGAACC.............................................................................................. 20 0 20 0.10 2 0 0 0 0 0 2 0 0 0
..........TGCGACTGGCTCCGTAACT.............................................................................................................................................................................................................................. 19 0 20 0.10 2 2 0 0 0 0 0 0 0 0
GTGGCTGAGCTGCGACTGGCTCCG................................................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.....................CAGTAACTGCTTCGGCTCA................................................................................................................................................................................................................... 19 1 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................................CGCATTTTCTCTTAACTTCATTATC..................................................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0 0 0 0 0
......................................................................................................................................TCCAAGGAGTACGTTGTAGAACCAT............................................................................................ 25 2 20 0.10 2 0 0 2 0 0 0 0 0 0
...................................................................................................................................ATAAACAAGGAGTACGTTGTAGAACCA............................................................................................. 27 1 20 0.10 2 2 0 0 0 0 0 0 0 0
.............................................AAGCCTTCGCTTCCTACGGA.......................................................................................................................................................................................... 20 3 10 0.10 1 1 0 0 0 0 0 0 0 0
.....................CCGTAACTGCTTCGGCTCATC................................................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...GCTGAGCTGCGACTGGCTCCG................................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCATAAC......................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......AGCTGCGACTGGCTCCGTAACTGC............................................................................................................................................................................................................................ 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................AAAAACAAGGAGTACGTTGTAGAACCAT............................................................................................ 28 2 20 0.10 2 2 0 0 0 0 0 0 0 0
.........................................................................................................................................AAGGAGTACGTTGTAGAACCATA........................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.........................................................CCATCGCATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 28 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.......................................................................................................................................ACAAGGAGTACGTTGTAGAACCGT............................................................................................ 24 1 20 0.10 2 0 0 0 2 0 0 0 0 0
..........................................................................................................................................AGGAGTACGTTGTAGAACCGTA........................................................................................... 22 1 20 0.10 2 2 0 0 0 0 0 0 0 0
.TGGCTGAGCTGCGACTGGCTCCGT.................................................................................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0 0 0 0 0
.TGGCTGAGCTGCGACTGGCTCCG................................................................................................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
......GAGCTGCGACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 26 0 20 0.10 2 0 0 2 0 0 0 0 0 0
............CGACTGGCTCCGTAACTGCTTCG........................................................................................................................................................................................................................ 23 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................CAAGGAGTACGTTGTAGAACC.............................................................................................. 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
........................................................TCCATCGCATTTTCTCTTAACTTCA.......................................................................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..GGCTGAGCTGCGACTGGCTCCGT.................................................................................................................................................................................................................................. 23 0 20 0.10 2 0 2 0 0 0 0 0 0 0
GTGGCTGAGCTGCGACTGGCT...................................................................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0 0 0 0 0 0 0
..........TGAGACTGGCTCCGTAACTGCTTCGGCT..................................................................................................................................................................................................................... 28 1 20 0.10 2 2 0 0 0 0 0 0 0 0
............................................................................................TGGGGGAATGGTACTTCGA............................................................................................................................................ 19 3 16 0.06 1 1 0 0 0 0 0 0 0 0
................................................................ATTTTCTCTTAACTTCATTATCGGGG................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................CTCGCATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0
......................CGTAACTGCTTCGGCTCAT.................................................................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 0 1
...............................................................................................................................................TACGTTGTAGGACCGTAACAT....................................................................................... 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................ATCGCATTTTCTCTTAACGTCATT........................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..GGCTGAGCTGCGACTGGCT...................................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................GTACGTTGTAGAACCATAA.......................................................................................... 19 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.........CTGCGACTGGCTCCGTAAC............................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCATAACATATC.................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........GCGACTGGCTCCGTAACTGCTTCGG....................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................GAAGAAAGAAAGAAAATA.................................................. 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........CTGCGACTGGCTCCGTAACTGC............................................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
................CGGCTCCGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................TAAGGAGTACGTTGTAGAACCAT............................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................CGCTTCCATCGCATTTTCTCTTAAC.............................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................TCCGTAACTGCTTCGGCTCATC................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................ACGTTGTAGAACCATAACATA...................................................................................... 21 0 20 0.05 1 0 0 0 0 1 0 0 0 0
.......................................................................................................................................ACAAGGGGTACGTTGTAGAACCGT............................................................................................ 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.............................................................CGCATTTTCTCTTAACGTCATTAT...................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................ACAAGGAGTACATTGAAGAACCATAAC......................................................................................... 27 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...................CTCCGTAACTGCTTCGGCTCATCG................................................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0
......GAGCTGAGACTGGCTCCGTAACTGCTG.......................................................................................................................................................................................................................... 27 2 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................AACAAGGAGTACGTTGTAGAACGAT............................................................................................ 25 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................AAGGGGTACGTTGTAGAACCGTAA.......................................................................................... 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................CAGTAACTGCTTCGGCTCATC................................................................................................................................................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................TTCTCTTAACGTCATTATCGGG.................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....................AAAGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 24 3 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................ACAAGGAGTACGTTGTAG.................................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................CTATCGCATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCATACG......................................................................................... 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................AAACAAGGAGTACATTGAAGAACCATA........................................................................................... 27 2 20 0.05 1 1 0 0 0 0 0 0 0 0
......CAGCTGCGACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................GTAACTGCTTCGGCTCATCGTAAAGC.......................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................CAAGGAGTACGTAGTAGAACCAT............................................................................................ 23 1 20 0.05 1 0 0 0 0 0 0 1 0 0
.........................................................ACATCGCATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................AAACAAGTAGTACATTGAAGAACCAT............................................................................................ 26 3 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................AGGAGTACATTGAAGAACCATAACA........................................................................................ 25 2 20 0.05 1 1 0 0 0 0 0 0 0 0
............CGACTGGCTCAGTAACTGCTTCGGC...................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................TGAACCATAACATATCAGAAAC.............................................................................. 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................GAACCATAACATATCAGAAACT............................................................................. 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
GAGGCTGAGCTGCGACTGGCT...................................................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................TGGAGTACATTGAAGAACCATAACA........................................................................................ 25 3 20 0.05 1 0 0 0 1 0 0 0 0 0
.....................TCGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 23 1 20 0.05 1 0 0 0 0 0 1 0 0 0
............................................................................................................................................GAGTACATTGAAGAACCATAACAT....................................................................................... 24 2 20 0.05 1 0 0 0 1 0 0 0 0 0
................TGGCTCAGTAACTGCTTCGGCTCAT.................................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................AGGAGTACGTTGTAGAACCATT........................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........GCTGCGACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................GTACGTTGTAGAACCATAACAT....................................................................................... 22 0 20 0.05 1 0 0 0 0 0 1 0 0 0
........................................................................................................................................CAAGGAGTACGTTGTAGAACCATAAC......................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................ACAAGGAGTACGTTGTAGAACCTTAA.......................................................................................... 26 1 20 0.05 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................AAAACAAGGAGTACGTTGTAGAACCGT............................................................................................ 27 2 20 0.05 1 1 0 0 0 0 0 0 0 0
..............TCTGGCTCCGTAACTGCTTCGGCTCAT.................................................................................................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................TAAACAAGGAGTACGTTGTAGAACCATA........................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGCTGTAGAACCAT............................................................................................ 20 1 20 0.05 1 0 0 1 0 0 0 0 0 0
........................AAACTGCTTCGGCTCATCGTAAAGCCT........................................................................................................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................GAACCATAACATATCAGAAA............................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................ACAAGCAGTACGTTGTAGAACCAT............................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGTCGTAGAACCATAA.......................................................................................... 22 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................CGTTGTAGAACCATAACATATC.................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................CATCGCATTTTCTCTTAACTTCAT......................................................................................................................................................................... 24 0 20 0.05 1 0 0 0 1 0 0 0 0 0
.....AAAGCTGCGACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 27 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCATAACA........................................................................................ 24 0 20 0.05 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................CAGGAGTACGTTGTAGAACCATAA.......................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................ACAAGGAGTACGTTGTAGAACCATAA.......................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................GAGTACGTTGTAGAACCA............................................................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............CGACTGGCTCCGTAACTGCTTCGGC...................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................AAAAGGAGTACGTTGTAGAACCATAACAT....................................................................................... 29 1 20 0.05 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................TAAACAAGGAGTACGTTGTAGAACC.............................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................CGCTTCCATCGCATTTTCTCT.................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..................TCTCCGTAACTGCTTCGGCTCATCG................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................................AAGGAGTACATTGAAGAACCATAACA........................................................................................ 26 2 20 0.05 1 1 0 0 0 0 0 0 0 0
..............ACTGGCTCCGTAACTGCTTCGGC...................................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
...GCTGAGCTGCGACTGGCTCCGTAACT.............................................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................AAACAAGGAGTACATTGTAGAACCAT............................................................................................ 26 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.......AGCTGCGACCGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................ACCTAAACAAGGAGTACGTTGTAGAACCAT............................................................................................ 30 2 20 0.05 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................GTAGAACCGTAACATATCAGA................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
................................................................ATTTTCTCTTAACTTCATTATCGGG.................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................TCCATCGCATTTTCTCTTAAC.............................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.........ATGCGACTGGCTCCGTAACTGCTTCGGC...................................................................................................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................CAAACAAGGAGTACGTTGTAGAACCAT............................................................................................ 27 1 20 0.05 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................AACAAGGAGTACGTTGTAGAA................................................................................................ 21 0 20 0.05 1 0 0 1 0 0 0 0 0 0
...............................................................................................GGGGATGGTACTTCGCAGTT........................................................................................................................................ 20 1 20 0.05 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................TGGAGTACGTTGTAGAACCATA........................................................................................... 22 1 20 0.05 1 0 0 0 0 0 0 0 1 0
.....TGAGTTGCGACTGGCTCAGTAACT.............................................................................................................................................................................................................................. 24 2 20 0.05 1 0 0 0 1 0 0 0 0 0
........................................................TCCATCGCATTTTCTGTTAACTTCAT......................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......CGTTGCGACTGGCTCCGTAACTGC............................................................................................................................................................................................................................ 24 2 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................AAAACAAGGAGTACGTTGTAGAACCA............................................................................................. 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...............CTGGCTCAGTAACTGCTTCGGCTCAT.................................................................................................................................................................................................................. 26 1 20 0.05 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................ACGAGTACGTTGTAGAACCATAA.......................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................CTCCGTAACTGCTTCGGCTCATCGTAAA............................................................................................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................GGCTCCGTAACTGCTTCGGCTCATC................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........ACTGCGACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0 0 0 0
.........................................................................................................................................TAGGAGTACGTTGTAGAACCATAACAT....................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................GAGTACGTTGTAGAACCATAACC........................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................ACAAGGATTACGTTGTAGAACCAT............................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........CTGCGACTGGCTCCGTAACTG............................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.................GGCTCTAAAACTGCTTCGGCTCA................................................................................................................................................................................................................... 23 3 20 0.05 1 1 0 0 0 0 0 0 0 0
TTGGCTGAGCTGCGACTG......................................................................................................................................................................................................................................... 18 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......AGCTGAGACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
....CTGAGCTGCGACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.....AGAGCTGCGACTGGCTCCGT.................................................................................................................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCATA........................................................................................... 21 0 20 0.05 1 0 0 0 0 0 0 0 1 0
....................................................................................................................................TAAACAAGGAGCACGTTGTAGAACCAT............................................................................................ 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0
.....TGAGCTGAGACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................CCATAACATATCAGAAACTA............................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................TGTAGAACCATAACATATCAGAAACTA............................................................................ 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................ACAAGGAGTACATTGAAGAACCATAC.......................................................................................... 26 3 20 0.05 1 0 0 0 1 0 0 0 0 0
................................................................ATTTTCTCTTAACTTCATTA....................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................AGGAGTACATTGAAGAACCATGA.......................................................................................... 23 3 20 0.05 1 1 0 0 0 0 0 0 0 0
......................AGTAACTGCTTCGGCTCAT.................................................................................................................................................................................................................. 19 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................ACAAGGAGTACGTTGTAGAACCTT............................................................................................ 24 1 20 0.05 1 0 0 0 1 0 0 0 0 0
.....................................................................................................................................AAACAAGGAGTACGTTGTAGAA................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................TGGAGTACGTTGTAGAACCGTA........................................................................................... 22 2 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................GTACGTTGTAGAACCATAACATATC.................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................ACTGCTTCGGCTCATCGTAAAGCC......................................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................TCAAGGAGTACGTTGTAGAACCAT............................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................GTACGTTGTAGGACCGTAACA........................................................................................ 21 2 20 0.05 1 1 0 0 0 0 0 0 0 0
.........TTGCGACTGGCTCCGTAACTGCTT.......................................................................................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................CTATCGCATTTTCTCTTAACTTCATT........................................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.........................................................CCATCGCATTTTCTCTTAACTT............................................................................................................................................................................ 22 0 20 0.05 1 0 0 0 1 0 0 0 0 0
.........................................................................................................................................AAGGAGTACGTTGTAGACCCAT............................................................................................ 22 1 20 0.05 1 0 0 1 0 0 0 0 0 0
...........GCGACTGGCTCCGTAACTGC............................................................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0 0 0 0
............CGACTGGCTCCGTAACTACTTCGGC...................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 1 0 0 0 0 0 0
..................GCTCCGTAACTGCTTCGGCTCAT.................................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 1 0 0 0 0 0 0
...........................................................ATCGCATTTTCTCTTAACTTCATTAT...................................................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0 0 0 0
...............CTGGCTCCGTAACTGCTTCGACT..................................................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...........................................................ATCGCATTTTCTCTTAACGTCATTAT...................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................TTAACTTTTTCTTAAACAAGGAGT........................................................................................................... 24 0 20 0.05 1 0 0 0 0 0 0 1 0 0
.....AAAGCTGCGACTGGCTCCGTAAC............................................................................................................................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................GAGTACGTTGTAGGTCCATAA.......................................................................................... 21 2 20 0.05 1 0 0 0 0 0 1 0 0 0
.........................................................................................................................................AAGGAGTACGTTGTAGAACCC............................................................................................. 21 1 20 0.05 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................TTAAACAAGGAGTACGTTGTAGAACCA............................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0 0 0 0
.............GACTGGCTCCGTAACTGCT........................................................................................................................................................................................................................... 19 0 20 0.05 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................TAAACAAGGAGAACGTTGTAGAACCAT............................................................................................ 27 1 20 0.05 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................AACAAGGAGTACATTGAAGAACCGT............................................................................................ 25 3 20 0.05 1 0 0 0 0 0 1 0 0 0
...................CTCCGTAACTGCTTCGGCTCA................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................TCCATCGCATTTTCTCTTAACTT............................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................CAAGGAGTACGTTGTAGAACAAT............................................................................................ 23 1 20 0.05 1 0 0 0 0 0 1 0 0 0
......................................................................................................................................AACAAGGAGTGCGTTGTAGAACCAT............................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................AGGAGTACATTGAAGAACCATAAAAT....................................................................................... 26 3 20 0.05 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................GGAGTACGTTGTAGAACCGTAACAT....................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
.............AACTGGCTCCGTAACTGCTTCGGCT..................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0 0 0 0
................TGGCTCCGTAACTGCTTCGGCTCATCGT............................................................................................................................................................................................................... 28 0 20 0.05 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................AAACAAGGAGCACGTTGTAGAACCAT............................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................AGGAGTACGTTGTAGAACCATAACGT....................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0 0 0 0
......................................................CTTCCATCGCATTTTCTCTTAACT............................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_78:7931-8181 - dps_2242 CACCGACTC----GA-CGC----TGACCGAGGCATTGACGAAGCCGAGTAGCATTTCGGAAGCGAAGGTAGCGTAAAAGAGAATTGAAGTAATAGCCCCGCGCGCCCTTACCATGAAGCGTCAAAAGAAAATTGAAAAAGAATTTGTTCCTCATGCAACATCTTGGTATTGTATAGTCTTTGATAATACTCTCTTCTTTCTTTCTTTTA---GACGGGGTA-GGTCCATACTAGTATCGTCTTGATCTGCTATTTCAGAAAATC
droPer2 scaffold_42:338330-338571 - CACCGACTC----GA-CGC----TGACCGAGGCATTGACGAAGCCGAGTAGCATTTCGGAGGCGAAGGTAGCGTAAAAGAGAATTGAAGTAATAGCCCCGCGCGCCCTTACCATGAAGCGTCAAAAGAAAATTGAAAAAGAATTTGTTCCTCATGCAACATCTTGGTATTGTATAGTCTTTGATAATACTCTCTTCTTTCTTTCTTTTA---GACGGGGTA----------TAGTATCGTTTTGATCTGCTATTTCAGAAAATC
droWil2 scf2_1100000004637:13087-13144 + ATTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTCTTGAATAATTTTTTATCTTTTCTTACTTTAA---TACAGGGGTAGGCAC------------------------------------A
droVir3 scaffold_13045:1617439-1617490 + TTGAAGA-------------AC--------------------------------------------------------------------------------------------------------------------CAAATTTTTTTTTCATACAACATCTTAATATTGACCGATCTTT-----------------------------------------------------------------------------------
droMoj3 scaffold_3878:2928-2979 + AA----------------------------------------------------------------------------------------------------------------------------------------AAAGTTTGTTCTACATGTCTAATCTCTGTGTTCTCTAGTCAGTGATAATA----------------------------------------------------------------------------
droGri2 scaffold_15126:4385304-4385382 + GCCAAACAC----CA-TGT----CGAATG--------------------------------------TCAGCGCAAAAGAGAAATGAGCAAGCAGCGCAGCGCGCATGCACC-------------------------------------------------------ATAGCAGAGCC----------------------------AA-------------------------------------------------------A
droAna3 scaffold_341:1147-1190 + CCCAC--------------CAGG--AA------------------------------------------------------------------------------------------ATTTTACAAAAAAGTGAAAAAAAAATTTGTTCC------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396740:507372-507461 - CCTTGT-------------AATG--AA------------------------------------------------------------------------------------------ATTATAAACGAAAATTAAAAAATAAATG-------GTTCTTCTTCTTGTTAACCCCGATTCTTTGAGATTTTT---------TTTGTTTTTA---A--------------------------------------------------A
droKik1 scf7180000302466:311724-311783 + AGAGA---------------------------------------------------------------------------------------------------------------------------AAATTAAGCAAGAATTTATTCTTTAAGGATCAGCTGGGCTTTTTGTGTTTGTTA---------------------------------------------------------------------------------A
droFic1 scf7180000454048:677130-677252 - CCCCGACCGACCGCAT---CATG--AA------------------------------------------------------------------------------------------GCTCGAAAC-AGAAACGAAAAATTTTTTGTATGGGATGCAACATCTTGATATTCTATAGTCTTTGGTACAACTTTCTTAATTAATTTTATTATAATAGA---TA------------------------------------------G
droEle1 scf7180000491350:2315-2382 - ACC---------------------------------------------------------------------------------------------------------------------------------------------TGTATCTTCTGTTGCACCTTGGTAATCCACAGTTTTTGGCAACTCTATCTCCCTCTTGTCCATT-------------------------------------------------------A
droRho1 scf7180000779456:26440-26538 - CATGCAA------CA-TAA----TAATCG------------------------------------------------------------------------------------------------------------------------------------------------------TCAATACAATATTTAATTTTCTTACATTTG---TAAAATCTA-AATTCCAAATGATATTGTATTGATATTGTATTTTGAAAAATC
droBia1 scf7180000302126:1390898-1390960 + AATAT-----------------------------------------------------------------------------------------------------------------------------------------TTTAG----------------TAAGATTATAAAATCTTATATACTATTTTATTTACTTTTTCTTTAA---GCCGGG---------------------------------------------G
droTak1 scf7180000414081:297-357 + AATGA----------------------------------------------------------------------------------------------------------------------------AATTAAAAAAGAAATAGTACATTGTAAGGCATTTGGATATAGCATAACCTCTGATA-------------------------------------------------------------------------------
droEug1 scf7180000408963:12676-12736 + CTCCCGC------------------------------------------------------------------------------------------------GCTCTTGCTAATATGTATAGCAAGCAAATGCAAAAAGAACTTGTATCCCCCGCA-----------------------------------------------------------------------------------------------------------
dm3 chrUextra:4187853-4187902 + CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTGGTCAGACACTCTTCCTTCCTCTTTTT--------------------------------------------------------
droSim2 x:20196596-20196653 - AAA-----------------------------------------------------------------------------------------------------------------------------------------AAATTGTTTGGTGTTACGCATCTTGTTATTCTAGTGTCTTTGATAATACCGTATT---------------------------------------------------------------------
droSec2 scaffold_5:138702-138756 - AA-----------------------------------------------------------------------------------------------------------------------------------------AAATTTGTATGGCGTTACGCATCTTGTTATTCTAGTGTCTTTGGTAGTACTCT------------------------------------------------------------------------
droYak3 chr2h:251272-251359 + CACCAC-------------GAAAAAATCG--------------------------------------T--G----------------------------------------------------C--------G--CAAAAAAATCGTATGGCGTAACGCATCTTGTTATTCTAATGTCTTTGGTAACACACTCTGCTTCACTT-------------------------------------------------------------
droEre2 scaffold_4784:23584192-23584276 + CACAAAAAA----------------ATCG--------------------------------------T--G----------------------------------------------------T--------T--CAAAAAAATCGTATGGCGTTACGCATCTTATTATTCTAGTGTCTTTGGTAGTACCCTCCTTATTGTCT-------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
CACCGACTC----GA-CGC----TGACCGAGGCATTGACGAAGCCGAGTAGCATTTCGGAAGCGAAGGTAGCGTAAAAGAGAATTGAAGTAATAGCCCCGCGCGCCCTTACCATGAAGCGTCAAAAGAAAATTGAAAAAGAATTTGTTCCTCATGCAACATCTTGGTATTGTATAGTCTTTGATAATACTCTCTTCTTTCTTTCTTTTA---GACGGGGTA-GGTCCATACTAGTATCGTCTTGATCTGCTATTTCAGAAAATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................CATCTTGGTATTGTATAGTCTTTGA.................................................................................25206.40128300071011700
................................................................................................................................................................TCTTGGTATTGTATAGTCTTTGATA...............................................................................25133.1541050000019170
................................................................................................................................................................TCTTGGTATTGTATAGTCTTTGA.................................................................................23202.3046026000002000
......................................................................................................................................................................................................TCTTTCTTTTA---GACGGGGTA-GGT.......................................2312.0020000000020
..................................................................GGTAGCGTAAAAGAGAATTGAAGT..............................................................................................................................................................................24201.903800500092400
................................................................................................................................................................TCTTGGTATTGTATAGTCTTTGATAA..............................................................................2651.8090300000510
...................................................................................................................................................TCCTCATGCAACATCTTGGTATTG.............................................................................................24201.202402400000000
..............................................................................................................................................................CATCTTGGTATTGTATAGTCTTTGATA...............................................................................27121.08130700000330
.............................................................................................................................................................................................TCTCTTCTTTCTTTCTTTTA---GACGG...............................................2511.0010000000010
..............................................................................................................................................................CATCTTGGTATTGTATAGTC......................................................................................20200.951901900000000
..................................................................................................................................................................TTGGTATTGTATAGTCTTTG..................................................................................20200.951901200000610
...................................................................................................................................................TCCTCATGCAACATCTTGGTATTGT............................................................................................25200.701401400000000
...................................................................................................................................................................TGGTATTGTATAGTCTTTGAT................................................................................21200.651301010001010
....................................................................................................................................................CCTCATGCAACATCTTGGTATTGTA...........................................................................................25200.651301300000000
........C----GA-CGC----TGACCGAGGCATTGACGA...............................................................................................................................................................................................................................24200.601201200000000
..............................................................................................................................................................CATCTTGGTATTGTATAGTCTTTGATAA..............................................................................2840.5020200000000
..................................................................................................................................................TTCCTCATGCAACATCTTGGTA................................................................................................22200.4590900000000
..................................................................GGTAGCGTAAAAGAGAATTGAAGTAA............................................................................................................................................................................26200.4080000001250
..............................................................................................................................................................CATCTTGGTATTGTATAGTCTTTGAT................................................................................26200.4080400000040
..................................................................GGTAGCGTAAAAGAGAATTGAAG...............................................................................................................................................................................23200.4080000107000
.........................................................................................................................................................TGCAACATCTTGGTATTGTATAGTCT.....................................................................................26200.4080000000800
...................................................................................................................................................................TGGTATTGTATAGTCTTTGATAATA............................................................................2530.3310000000100
........C----GA-CGC----TGACCGAGGCATTGACGAAGC............................................................................................................................................................................................................................27200.3060000000600
................................................................................................................................................TGTTCCTCATGCAACATCTTGG..................................................................................................22200.3060600000000
...................................................................................................................................................................TGGTATTGTATAGTCTTTGATAA..............................................................................2350.2010100000000
............................................................................................................................................................AACATCTTGGTATTGTATAGTT......................................................................................22200.2040000000040
..................................................................................................................................................TTCCTCATGCAACATCTTGGT.................................................................................................21200.2040400000000
................................................................................................................................................................TCTTGGTATTGTATAGT.......................................................................................17200.2040000000040
.................................................................................................................................................................CTTGGTATTGTATAGTCTTTGATA...............................................................................24130.1520200000000
....................................................................TAGCGTAAAAGAGAATTGAAGTAA............................................................................................................................................................................24200.1530000000030
....................................................................................TGAAGTAATAGCCCCGCGCGCC..............................................................................................................................................................22200.1530300000000
.......................TGACCGAGGCATTGACGAAGC............................................................................................................................................................................................................................21200.1530300000000
.......TC----GA-CGC----TGACCGAGGCATTGA..................................................................................................................................................................................................................................22200.1530300000000
..................C----TGACCGAGGCATTGACGAAGCCGAG........................................................................................................................................................................................................................26200.1530300000000
.........................................................................................................................................................TGCAACATCTTGGTATTGTATAGTCTT....................................................................................27200.1530300000000
.......................TGACCGAGGCATTGACGAAGCC...........................................................................................................................................................................................................................22200.1530300000000
..................................................................GGTAGCGTAAAAGAGAATTGAAAA..............................................................................................................................................................................24200.1020200000000
................................................................................................................................................................TCTTGGTATTGTATAGTCTT....................................................................................20200.1020200000000
............................................................................................................................................................AACATCTTGGTATTGTATAG........................................................................................20200.1020000000020
..............................................................................................................................................................CATCTTGGTATTGTATAGTCTTC...................................................................................23200.1020020000000
................................CATTGACGAAGCCGAGTAGCA...................................................................................................................................................................................................................21200.1020200000000
....................................................................TAGCGTAAAAGAGAATTGAAGTAAA...........................................................................................................................................................................25200.1020200000000
........C----GA-CGC----TGACCGAGGCATTGACGAAG.............................................................................................................................................................................................................................26200.1020000000200
.............................................................................................................................................................ACATCTTGGTATTGTATAGTCTTTG..................................................................................25200.1020000000020
..................................................................GGTAGCGTAAAAGAGAATTGAAGTA.............................................................................................................................................................................25200.1020000002000
...............................................................................................................................................................ATCTTGGTATTGTATAGTCTTTGATA...............................................................................26130.0810100000000
...................................................................................................................................................................TGGTATTGTATAGTCTTTGATA...............................................................................22160.0610010000000
....................................................................................................................................................................GGTATTGTATAGTCTTTGATA...............................................................................21170.0610100000000
........................GACCGAGGCATTGACGAAGCCGA.........................................................................................................................................................................................................................23200.0510100000000
....................................................................................TGAAGTAATAGCCCCGCGCGCCC.............................................................................................................................................................23200.0510001000000
.................GC----TGACCGAGGCATTGACGAAGCC...........................................................................................................................................................................................................................24200.0510100000000
..................................TTGACGAAGCCGAGTAGCATTTC...............................................................................................................................................................................................................23200.0510100000000
..................................................................................ATTGAAGTAATAGCCCCGCGCGCC..............................................................................................................................................................24200.0510100000000
................CGC----TGACCGAGGCATTGACGAAGC............................................................................................................................................................................................................................24200.0510000100000
..................................................................GGTAGCGTAAAAGAGAATTGAAA...............................................................................................................................................................................23200.0510100000000
....................................................................TAGCGTAAAAGAGAATTGAAGTAAT...........................................................................................................................................................................25200.0510100000000
...............................................................................................................................................TTGTTCCTCATGCAACATCTTGGTAC...............................................................................................26200.0510010000000
..................................................................GGTAGCGTAAAAGAGAATTGAA................................................................................................................................................................................22200.0510000000010
.................................................................................................................................................GTTCCTCATGCAACATCTTGGT.................................................................................................22200.0510100000000
...................................................................................................................................TTGAAAAAGAATTTGTTCCTCA...............................................................................................................22200.0510100000000
.......TC----GA-CGC----TGACCGAGGCATTGACGAAG.............................................................................................................................................................................................................................27200.0510000000010
..............................................................................................................................................................CATCTTGGTATTGTATAGTCTTTG..................................................................................24200.0510000000001
........................................................................GTAAAAGAGAATTGAAGT..............................................................................................................................................................................18200.0510100000000
....................................................................TAGCGTAAAAGAGAATTGAAGTAATAGC........................................................................................................................................................................28200.0510100000000
....................................................................TAGCGTAAAAGAGAATTGAAGT..............................................................................................................................................................................22200.0510000100000
.........................................................................TAAAAGAGAATTGAAGTAATAGCC.......................................................................................................................................................................24200.0510100000000
..................................................................GGTAGCGTAAAAGAGAATTGAAGTAAT...........................................................................................................................................................................27200.0510100000000
...................................................................GTAGCGTAAAAGAGAATTGAAGTAA............................................................................................................................................................................25200.0510100000000
.................GC----TGACCGAGGCATTGACGAAGCCGA.........................................................................................................................................................................................................................26200.0510100000000
.................................................................................AATTGAAGTAATAGCCCCGCGCG................................................................................................................................................................23200.0510100000000
................................................................................................................................................................TCTTGGTATTGTATAGTCGGC...................................................................................21200.0510000000010
................................................................................................................................................................TCTTGGTATTGTATAGTCTTTGAT................................................................................24200.0510000000010
...................................................................................................................................................................TGGTATTGTATAGTCTTTGA.................................................................................20200.0510000010000
..........................................................................................................................................AGAATTTGTTCCTCATGCAACAT.......................................................................................................23200.0510100000000
.........................................................................................................................................................TGCAACATCTTGGTATTGTATAGTCC.....................................................................................26200.0510010000000
......................................................................................................................................................TCATGCAACATCTTGGTATTGTAT..........................................................................................24200.0510100000000
....................................................................................................................................................CCTCATGCAACATCTTGGTAT...............................................................................................21200.0510100000000
........C----GA-CGC----TGACCGAGGCATTGAA.................................................................................................................................................................................................................................22200.0510100000000
.....................................................................................................................................................................GTATTGTATAGTCTTTGATAA..............................................................................21200.0510000000010
..............................................................................GAGAATTGAAGTAATAGCCCCGCGC.................................................................................................................................................................25200.0510000001000
droPer2
CACCGACTC----GA-CGC----TGACCGAGGCATTGACGAAGCCGAGTAGCATTTCGGAGGCGAAGGTAGCGTAAAAGAGAATTGAAGTAATAGCCCCGCGCGCCCTTACCATGAAGCGTCAAAAGAAAATTGAAAAAGAATTTGTTCCTCATGCAACATCTTGGTATTGTATAGTCTTTGATAATACTCTCTTCTTTCTTTCTTTTA---GACGGGGTA----------TAGTATCGTTTTGATCTGCTATTTCAGAAAATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................GCATTGACGAAGCCGAGTAGCATTTC...............................................................................................................................................................................................................26202.00400400000
.................................................................................................................TGAAGCGTCAAAAGAAAATTGA.................................................................................................................................2230.331000001
........C----GA-CGC----TGACCGAGGCATTGACGAAA.............................................................................................................................................................................................................................26200.153300000
.............GA-CGC----TGACCGAGGCATTG...................................................................................................................................................................................................................................19200.102000002
.ACCGACTC----GA-CGC----TGACCGAG.........................................................................................................................................................................................................................................21200.102020000
.......................TGACCGAGGCATTGACGAAGCCGAGT.......................................................................................................................................................................................................................26200.102000002
.............................AGGCATTGACGAAGCCGAGTAGCAT..................................................................................................................................................................................................................25200.102020000
..................................................................................ATTGAAGTAATAGCCCCGCG..................................................................................................................................................................20200.051010000
..........................................................................AAAAGAGAATTGAAGTAATAG.........................................................................................................................................................................21200.051000001
...........................CGAGGCATTGACGAAGCCGAGTAGCA...................................................................................................................................................................................................................26200.051010000
...............................GCATTGACGAAGCCGAGTAGCATTTCGA.............................................................................................................................................................................................................28200.051010000
....................................................................................................................................TGAAAAAGAATTTGTTCCTCA...............................................................................................................21200.051010000
..........................................................................................................................................................GCAACATCTTGGTATTGTATAGTCTT....................................................................................26200.051010000
.............GA-CGC----TGACCGAGGCATTGACGAAG.............................................................................................................................................................................................................................25200.051010000
........C----GA-CGC----TGACCGAGGCATTGACGA...............................................................................................................................................................................................................................24200.051010000
................................................TAGCATTTCGGAGGCGAAGGTA..................................................................................................................................................................................................22200.051000001
..................................TTGACGAAGCCGAGTAGCATT.................................................................................................................................................................................................................21200.051000001
...CGACTC----GA-CGC----TGACCGAAA........................................................................................................................................................................................................................................20200.051010000
...............................................................................................................................................................ATCTTGGTATTGTATAGTCA.....................................................................................20200.051010000
droWil2
ATTGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTCTTGAATAATTTTTTATCTTTTCTTACTTTAA---TACAGGGGTAGGCAC------------------------------------ASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TTGAAGA-------------AC--------------------------------------------------------------------------------------------------------------------CAAATTTTTTTTTCATACAACATCTTAATATTGACCGATCTTT-----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AA----------------------------------------------------------------------------------------------------------------------------------------AAAGTTTGTTCTACATGTCTAATCTCTGTGTTCTCTAGTCAGTGATAATA----------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................GTCTAATCTCTGTGTTCTCTAGTC......................................................................................2411.001100000
droGri2
GCCAAACAC----CA-TGT----CGAATG--------------------------------------TCAGCGCAAAAGAGAAATGAGCAAGCAGCGCAGCGCGCATGCACC-------------------------------------------------------ATAGCAGAGCC----------------------------AA-------------------------------------------------------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
CCCAC--------------CAGG--AA------------------------------------------------------------------------------------------ATTTTACAAAAAAGTGAAAAAAAAATTTGTTCC------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................AAGTGAAAAAAAAATTTGTCG...................................................................................................................2160.171000010
droBip1
CCTTGT-------------AATG--AA------------------------------------------------------------------------------------------ATTATAAACGAAAATTAAAAAATAAATG-------GTTCTTCTTCTTGTTAACCCCGATTCTTTGAGATTTTT---------TTTGTTTTTA---A--------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droKik1
AGAGA---------------------------------------------------------------------------------------------------------------------------AAATTAAGCAAGAATTTATTCTTTAAGGATCAGCTGGGCTTTTTGTGTTTGTTA---------------------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
CCCCGACCGACCGCAT---CATG--AA------------------------------------------------------------------------------------------GCTCGAAAC-AGAAACGAAAAATTTTTTGTATGGGATGCAACATCTTGATATTCTATAGTCTTTGGTACAACTTTCTTAATTAATTTTATTATAATAGA---TA------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droEle1
ACC---------------------------------------------------------------------------------------------------------------------------------------------TGTATCTTCTGTTGCACCTTGGTAATCCACAGTTTTTGGCAACTCTATCTCCCTCTTGTCCATT-------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droRho1
CATGCAA------CA-TAA----TAATCG------------------------------------------------------------------------------------------------------------------------------------------------------TCAATACAATATTTAATTTTCTTACATTTG---TAAAATCTA-AATTCCAAATGATATTGTATTGATATTGTATTTTGAAAAATCSizeHit CountTotal NormTotal
No Reads
droBia1
AATAT-----------------------------------------------------------------------------------------------------------------------------------------TTTAG----------------TAAGATTATAAAATCTTATATACTATTTTATTTACTTTTTCTTTAA---GCCGGG---------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droTak1
AATGA----------------------------------------------------------------------------------------------------------------------------AATTAAAAAAGAAATAGTACATTGTAAGGCATTTGGATATAGCATAACCTCTGATA-------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTCCCGC------------------------------------------------------------------------------------------------GCTCTTGCTAATATGTATAGCAAGCAAATGCAAAAAGAACTTGTATCCCCCGCA-----------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTGGTCAGACACTCTTCCTTCCTCTTTTT--------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTGGT................................................................................2620135.102702000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000100000000000000000000003600000130413050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTGGTC...............................................................................27207.951590002002000000000000000000000000000000000000000000000000000000000000000000000000000000035000000014000000000001000060100000000000000000000000003000004040000000000000000000000000020000050000009013000000000000000000000000000007000000000000000001000001000000000000000000000000000000000000000000000001000800000001200000000000000000300000016
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTG..................................................................................24204.7595000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000655000000000000000000000000000000000000032000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTT....................................................................................22203.857700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000006800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTT...................................................................................23202.2044000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGT.......................................................................................19201.4028000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTGTTATTCTAGTGTCTTTGGT................................................................................22201.352700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500070000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000140
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTC......................................................................................20201.202400000000000000000000000000000000000000000000000000000000020000000000000000000000001000000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGTTATTCTAGTGTCTTTGGTCAGA............................................................................2581.0080000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTGGTCA..............................................................................28200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000001000000000000000000000000000000000000000011080000111000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTGG.................................................................................25200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700030000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TCTTGTTATTCTAGTGTCTTTGGTC...............................................................................25200.75150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000016300000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
CA--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCT.....................................................................................21200.70140000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000002000000000000000000000000000000000000000
................................................................................................................................................................TCTTGTTATTCTAGTGTCTTTGGT................................................................................24200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000
...................................................................................................................................................................TGTTATTCTAGTGTCTTTGG.................................................................................20200.4590000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGTTATTCTAGTGTCTTTGGT................................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000
.A--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTGGTC...............................................................................26200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TCAGACACTCTTCCTTCCTCTTTTT--------------------------------------------------------2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TAGTGTCTTTGGTCAGACACTCTT.....................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TCTTGTTATTCTAGTGTCTTTG..................................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
..................................................................................................................................................................TTGTTATTCTAGTGTCTTTGG.................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
....................................................................................................................................................................GTTATTCTAGTGTCTTTGGTC...............................................................................21200.2550000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTATTCTAGTGTCTTTGGTCAGAC...........................................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CTTGTTATTCTAGTGTCTTTGG.................................................................................22200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TCTTGTTATTCTAGTGTCTTTGGTCA..............................................................................26200.2040000000000000000000000000000000000000000000000000000000000010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGTTATTCTAGTGTCTTTGGTCAG.............................................................................24120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.A--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCT.....................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGTTATTCTAGTGTCTTTGGTCA..............................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................TATTCTAGTGTCTTTGGT................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGTTATTCTAGTGTCTTTGGTCAGT............................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................ATTCTAGTGTCTTTGGTC...............................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.A--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTG..................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000
.A--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTT...................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..................................................................................................................................................................TTGTTATTCTAGTGTCTTTGGTC...............................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.A--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTGG.................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................TTATTCTAGTGTCTTTGGTCA..............................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.A--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTGGT................................................................................25200.1020000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TGTTATTCTAGTGTCTTTGGTC...............................................................................22200.1020010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TCTTGTTATTCTAGTGTCTTTGG.................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................TTATTCTAGTGTCTTTGG.................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000
....................................................................................................................................................................GTTATTCTAGTGTCTTTGGT................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................TTATTCTAGTGTCTTTGGT................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
....................................................................................................................................................................GTTATTCTAGTGTCTTTG..................................................................................18200.0510000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TATTCTAGTGTCTTTGGTC...............................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.A--------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTGTTATTCTAGTGTCTTTGGTCA..............................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTGTTATTCTAGTGTCTTTG..................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTGTTATTCTAGTGTCTTTGGTCA..............................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CTTGTTATTCTAGTGTCTTTGGTC...............................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAA-----------------------------------------------------------------------------------------------------------------------------------------AAATTGTTTGGTGTTACGCATCTTGTTATTCTAGTGTCTTTGATAATACCGTATT---------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................CTTGTTATTCTAGTGTCTTTGATAA..............................................................................2535.671700000061532000000
..............................................................................................................................................................CATCTTGTTATTCTAGTGTCTTTGATA...............................................................................27112.09230000001111100000000
..............................................................................................................................................................CATCTTGTTATTCTAGTGTCTTTG..................................................................................24200.5010000000000010000000
................................................................................................................................................................TCTTGTTATTCTAGTGTCTTTGATAATA............................................................................2820.50100000010000000000
...............................................................................................................................................................................GTCTTTGATAATACCGTA.......................................................................1820.50100000100000000000
.................................................................................................................................................................CTTGTTATTCTAGTGTCTTC...................................................................................20200.5010000010000000000000
.................................................................................................................................................................CTTGTTATTCTAGTGTCTTTGATAATA............................................................................2720.50100000010000000000
.................................................................................................................................................................CTTGTTATTCTAGTGTCTTTGATA...............................................................................24110.27300010000110000000
..............................................................................................................................................................CATCTTGTTATTCTAGTGTCTTTGAT................................................................................26200.20400000030100000000
.................................................................................................................................................................CTTGTTATTCTAGTGTCTTTGAT................................................................................23200.20400000003100000000
.............................................................................................................................................................GCATCTTGTTATTCTAGTGTCTTTGA.................................................................................26200.15300000000003000000
.......................................................................................................................................................................ATTCTAGTGTCTTTGATAA..............................................................................1970.14100000000001000000
..............................................................................................................................................................CATCTTGTTATTCTAGTGTCTTT...................................................................................23200.10200020000000000000
..............................................................................................................................................................CATCTTGTTATTCTAGTGTCT.....................................................................................21200.10200000000002000000
................................................................................................................................................................TCTTGTTATTCTAGTGTCTTTGATA...............................................................................25110.09100000000100000000
..................................................................................................................................................................TTGTTATTCTAGTGTCTTTG..................................................................................20200.05100000000001000000
..............................................................................................................................................................CATCTTGTTATTCTAGTGTCTTTGA.................................................................................25200.05100000000100000000
................................................................................................................................................................TCTTGTTATTCTAGTGTC......................................................................................18200.05100000000001000000
droSec2
AA-----------------------------------------------------------------------------------------------------------------------------------------AAATTTGTATGGCGTTACGCATCTTGTTATTCTAGTGTCTTTGGTAGTACTCT------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................CGTTACGCATCTTGTTATTCT............................................................................................21200.1022000
.............................................................................................................................................................GCATCTTGTTATTCTAGTGTCTTTGG.................................................................................26200.0510010
...................................................................................................................................................................TGTTATTCTAGTGTCTTTGG.................................................................................20200.0510010
droYak3
CACCAC-------------GAAAAAATCG--------------------------------------T--G----------------------------------------------------C--------G--CAAAAAAATCGTATGGCGTAACGCATCTTGTTATTCTAATGTCTTTGGTAACACACTCTGCTTCACTT-------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................TGTTATTCTAATGTCTTTGGTAA..............................................................................2380.13101000000000
..............................................................................................................................................................CATCTTGTTATTCTAATGTCTTTGGTA...............................................................................27200.10202000000000
..............................................................................................................................................................CATCTTGTTATTCTAATGTCTTTG..................................................................................24200.05101000000000
................................................................................................................................................................TCTTGTTATTCTAATGTCTTTG..................................................................................22200.05101000000000
droEre2
CACAAAAAA----------------ATCG--------------------------------------T--G----------------------------------------------------T--------T--CAAAAAAATCGTATGGCGTTACGCATCTTATTATTCTAGTGTCTTTGGTAGTACCCTCCTTATTGTCT-------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................CATCTTATTATTCTAGTGTCTTTGGT................................................................................26201.452900000029

Generated: 05/18/2015 at 03:47 AM