ID:

dps_2241

 Coordinate:

Unknown_group_779:9417-9567 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.8

Flybase annnotation

CDS [Dpse\GA28142-cds]; exon [dpse_GLEANR_7556:2]; intron [Dpse\GA28142-in]

No Repeatable elements found

mature
  1. XL_group1e:1189630-1189653 +
  2. Unknown_group_779:6496-6519 -
  3. dps_2241  Unknown_group_779:9427-9450 -
star
  1. dps_2621  XL_group1e:1189549-1189570 +
  2. dps_2240  Unknown_group_779:6579-6600 -
  3. dps_2241  Unknown_group_779:9510-9531 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATAACCAGCCGACTGGCTGCTCCACAATCATTGTCAACCAAAAGAATTGCGTAGGTAAAGCCTAGAGGAGCCCCAGAAGATTGCTTTAATACAGTGCAACGTCTCGTTTATAGCGACTGTTGGGCCACACCGAGGATGCCCTGACGGAGACCCTCAATCATTACTATTTTGTTGACGCGCACATCATCAGCGACAAGCCGCAGGGCAAATACAATGTCAAGGAGGAGCACTTTATGTCCCTGTGCTACGCC
**************************************************************************************.......((((..((((......((((.((..((((((.....((((((....)))..))).....))))))..)).))))......)))).)))).........************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 M059
embryo
 M062
head
 V112
male body		 SRR902010
ovaries
 GSM444067
head
 GSM343916
embryo
.......................................................................................................................................................................TTTGTTGACGCGCACATCATCAGC............................................................ 24 0 3 8.00 24 22 2 0 0 0 0 0
......................................................................................TAATACAGTGCAACGTCTCGTT............................................................................................................................................... 22 0 3 8.00 24 22 1 0 1 0 0 0
......................................................................................TAATACAGTGCAACGTCTCGTTT.............................................................................................................................................. 23 0 3 6.67 20 18 0 0 1 0 1 0
.................................TCAACCAAAAGAATTGCGTAGGTAAAGC.............................................................................................................................................................................................. 28 0 3 5.33 16 14 1 1 0 0 0 0
.................................TCAACCAAAAGAATTGCGTAGGTAAAG............................................................................................................................................................................................... 27 0 3 5.00 15 15 0 0 0 0 0 0
.................................TCAACCAAAAGAATTGCGTAGG.................................................................................................................................................................................................... 22 0 3 4.33 13 11 0 0 2 0 0 0
........................................................................................................................TGGGCCACACCGAGGATGCCCTGACGG........................................................................................................ 27 0 3 4.00 12 12 0 0 0 0 0 0
.................................TCAACCAAAAGAATTGCGTAGGTA.................................................................................................................................................................................................. 24 0 3 3.33 10 10 0 0 0 0 0 0
........................................................................................................................TGGGCCACACCGAGGATGCCCTGACG......................................................................................................... 26 0 3 3.00 9 9 0 0 0 0 0 0
......................................................................................TAATACAGTGCAACGTCTCGTTTA............................................................................................................................................. 24 0 3 3.00 9 9 0 0 0 0 0 0
..............................................................TAGAGGAGCCCCAGAAGATTG........................................................................................................................................................................ 21 0 3 3.00 9 9 0 0 0 0 0 0
......................................................................................TAATACAGTGCAACGTCTCGT................................................................................................................................................ 21 0 3 2.33 7 7 0 0 0 0 0 0
.................................TCAACCAAAAGAATTGCGTAGGT................................................................................................................................................................................................... 23 0 3 2.00 6 6 0 0 0 0 0 0
.......................................................................................................................................................................TTTGTTGACGCGCACATCATCAGCGA.......................................................... 26 0 3 2.00 6 6 0 0 0 0 0 0
.......................................................................................................................................................................TTTGTTGACGCGCACATCATCAG............................................................. 23 0 3 2.00 6 6 0 0 0 0 0 0
.................................................................................................................................................................................................................TACAATGTCAAGGAGGAGCACTT................... 23 0 3 1.67 5 5 0 0 0 0 0 0
............................................................................................................TATAGCGACTGTTGGGCCACACCGA...................................................................................................................... 25 0 3 1.67 5 5 0 0 0 0 0 0
........................................................................................................................TGGGCCACACCGAGGATGCCCTGAC.......................................................................................................... 25 0 3 1.67 5 5 0 0 0 0 0 0
.......................................................................................................................................................................TTTGTTGACGCGCACATCATCA.............................................................. 22 0 3 1.33 4 4 0 0 0 0 0 0
.......................................................................................................................TTGGGCCACACCGAGGATGCCCTGAC.......................................................................................................... 26 0 3 1.33 4 3 0 0 0 0 1 0
.......................................................................................................................TTGGGCCACACCGAGGATGCCCTGA........................................................................................................... 25 0 3 1.33 4 3 1 0 0 0 0 0
......................................................................................TAATACAGTGCAACGTCTCGTTTATAG.......................................................................................................................................... 27 0 3 1.33 4 4 0 0 0 0 0 0
.......................................................................................................................................................................TTTGTTGACGCGCACATCATCAGCG........................................................... 25 0 3 1.33 4 3 0 0 1 0 0 0
.......................................................................................AATACAGTGCAACGTCTCGTTT.............................................................................................................................................. 22 0 3 1.33 4 4 0 0 0 0 0 0
..............................................................................................................TAGCGACTGTTGGGCCACACCGAG..................................................................................................................... 24 0 3 1.00 3 3 0 0 0 0 0 0
........................................................................................................................................................................TTGTTGACGCGCACATCATCA.............................................................. 21 0 3 1.00 3 3 0 0 0 0 0 0
.........................................................................................TACAGTGCAACGTCTCGTTTATAG.......................................................................................................................................... 24 0 3 1.00 3 2 0 0 0 1 0 0
........................................................................................................................................................................................................CAGGGCAAATACAATGTCAAGGAGGAG........................ 27 0 2 1.00 2 2 0 0 0 0 0 0
..............................................................................................................TAGCGACTGTTGGGCCACACCGAGG.................................................................................................................... 25 0 3 1.00 3 3 0 0 0 0 0 0
..................................CAACCAAAAGAATTGCGTAGGTAAAGC.............................................................................................................................................................................................. 27 0 3 1.00 3 3 0 0 0 0 0 0
..............................................................................................................TAGCGACTGTTGGGCCACACCGAGGA................................................................................................................... 26 0 3 1.00 3 3 0 0 0 0 0 0
.................................................................................................................................................................TACTATTTTGTTGACGCGCACATCA................................................................. 25 0 3 1.00 3 3 0 0 0 0 0 0
........................................................................................................................................................................................................................TCAAGGAGGAGCACTTCATGTCCCTG......... 26 1 3 1.00 3 3 0 0 0 0 0 0
......................................................................................TAATACAGTGCAACGTCTCGTTTATA........................................................................................................................................... 26 0 3 1.00 3 3 0 0 0 0 0 0
.......................................................................................................................................................................TTTGTTGACGCGCACATCATCAGCGT.......................................................... 26 1 3 0.67 2 1 0 0 0 0 1 0
........................................................................................................................................................................TTGTTGACGCGCACATCATCAGCGACAA....................................................... 28 0 3 0.67 2 2 0 0 0 0 0 0
.................................TCAACCAAAAGAATTGCGTAGGTAAA................................................................................................................................................................................................ 26 0 3 0.67 2 2 0 0 0 0 0 0
........................................................................................................................................................................TTGTTGACGCGCACATCATCAGCG........................................................... 24 0 3 0.67 2 2 0 0 0 0 0 0
......................................................................................TAATACAGTGCAACGTCTCGTTTATAGC......................................................................................................................................... 28 0 3 0.67 2 1 1 0 0 0 0 0
........................................................................................................................TGGGCCACACCGAGGATGCCCTGACGGA....................................................................................................... 28 0 3 0.67 2 2 0 0 0 0 0 0
.......................................................................................................................TTGGGCCACACCGAGGATGCCC.............................................................................................................. 22 0 3 0.67 2 2 0 0 0 0 0 0
.......................................................................................................................TTGGGCCACACCGAGGATGCCCTGACGG........................................................................................................ 28 0 3 0.67 2 2 0 0 0 0 0 0
...................................................................................................................ACTGTTGGGCCACACCGAGGATGCCC.............................................................................................................. 26 0 3 0.67 2 1 0 1 0 0 0 0
..............................................................TAGAGGAGCCCCAGAAGA........................................................................................................................................................................... 18 0 3 0.67 2 2 0 0 0 0 0 0
...............................................................AGAGGAGCCCCAGAAGATTG........................................................................................................................................................................ 20 0 3 0.67 2 2 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTCAAGGAGGAGCACTTCATG............... 22 1 3 0.67 2 2 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTCAAGGAGGAGCACTTCATGTCCC........... 26 1 3 0.67 2 2 0 0 0 0 0 0
........................................................................................................................................................................TTGTTGACGCGCACATCATCAGCGA.......................................................... 25 0 3 0.67 2 2 0 0 0 0 0 0
..............................................................TAGAGGAGCCCCAGAAGATTGCTT..................................................................................................................................................................... 24 0 3 0.67 2 2 0 0 0 0 0 0
.....................................................................................................................TGTTGGGCCACACCGAGGATG................................................................................................................. 21 0 3 0.67 2 2 0 0 0 0 0 0
.................................TCAACCAAAAGAATTGCGTAGGTAAAGCC............................................................................................................................................................................................. 29 0 3 0.67 2 1 0 1 0 0 0 0
........................................................................................................................................TGCCCTGACGGAGACCCTCAATCAT.......................................................................................... 25 0 3 0.67 2 2 0 0 0 0 0 0
.........................................................................................................................................................................TGTTGACGCGCACATCATCAGCGACA........................................................ 26 0 3 0.67 2 2 0 0 0 0 0 0
.....................................................................................................................TGTTGGGCCACACCGAGGATGCCC.............................................................................................................. 24 0 3 0.67 2 2 0 0 0 0 0 0
.................................TCAACCAAAAGAATTGCGTAGGTAA................................................................................................................................................................................................. 25 0 3 0.67 2 2 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTCAAGGAGGAGCACTTTATGTCCCTG......... 28 0 3 0.67 2 2 0 0 0 0 0 0
..........................................................................................................................................................................................TCAGCGACAAGCCGCAGGGCAAAT......................................... 24 0 2 0.50 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................TCATCAGCGACAAGCCGCAGGGCAAA.......................................... 26 0 2 0.50 1 1 0 0 0 0 0 0
......................................................................................................................................................................................ATCATCAGCGACAAGCCGCAGGGC............................................. 24 0 2 0.50 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................CAAGCCGCAGGGCAAATACAATGTCAA............................... 27 0 2 0.50 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................GGCAAATACAATGTCAAGGAGGAGCA...................... 26 0 2 0.50 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................AAGCCGCAGGGCAAATACAATGTCAA............................... 26 0 2 0.50 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................CAAGCCGCAGGGCAAATACAAT.................................... 22 0 2 0.50 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................AGCCGCAGGGCAAATACAATGTCAA............................... 25 0 2 0.50 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TACAATGTCAAGGAGGAGCACTTCA................. 25 1 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................................................................................TGTTGACGCGCACATCATCAGCGAC......................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
.TAACCAGCCGACTGGCTGCTCC.................................................................................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0
..........................................................................................................................GGCCACACCGAGGATGCCCTGACGG........................................................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AATGTCAAGGAGGAGCACTTCATGT.............. 25 1 3 0.33 1 1 0 0 0 0 0 0
..............................................................................................................................ACACCGAGGATGCCCTGACGGAGACCC.................................................................................................. 27 0 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................GTGCAACGTCTCGTTTATAG.......................................................................................................................................... 20 0 3 0.33 1 0 0 0 0 1 0 0
....................................................................................................................CTGTTGGGCCACACCGAGGATGCCC.............................................................................................................. 25 0 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................................................................................TGTTGACGCGCACATCATCAGC............................................................ 22 0 3 0.33 1 1 0 0 0 0 0 0
..................................CAACCAAAAGAATTGCGTAGG.................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0
..............................................................TAGAGGAGCCCCAGAAGAT.......................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................................GGATGCCCTGACGGAGACC................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TACAATGTCAAGGAGGAGCACTTTA................. 25 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................................................................................................TTTGTTGACGCGCACATCATAG.............................................................. 22 2 3 0.33 1 1 0 0 0 0 0 0
..............................................................................................................................ACACCGAGGATGCCCTGACGGAG...................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................................................................................GCACATCATCAGCGACAAGCCGCAGGG.............................................. 27 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATGTCAAGGAGGAGCACTTCATG............... 23 1 3 0.33 1 1 0 0 0 0 0 0
.............................ATTGTCAACCAAAAGAATTGC......................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0
......................................................................................................................................................................................................................TGTCAAGGAGGAGCACTTTATGTCCC........... 26 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TACAATGTCAAGGAGGAGCACTTCATG............... 27 1 3 0.33 1 1 0 0 0 0 0 0
............................................................................................................................................................ATCATTACTATTTTGTTGACGCGCAC..................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TCAAGGAGGAGCACTTCATGTCCC........... 24 1 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................TGGGCCGCACCGAGGATGCCCTGACGG........................................................................................................ 27 1 3 0.33 1 1 0 0 0 0 0 0
............................................................................................................TATAGCGACTGTTGGGCCACACCGAG..................................................................................................................... 26 0 3 0.33 1 0 0 0 0 1 0 0
...............................................TGCGTAGGTAAAGCCTAGAGGAGCC................................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
..............................................................................................................................ACACCGAGGATGCCCTGACGGAGACC................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................................................TTGGGCCACACCGAGGATGC................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................GACTGTTGGGCCACACCGAGGAT.................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0 0 0
.................................TCAACCAAAAGAATTGCGTAGGCAAAGC.............................................................................................................................................................................................. 28 1 3 0.33 1 1 0 0 0 0 0 0
.........................................AAGAATTGCGTAGGTAAAGC.............................................................................................................................................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0
......................................CAAAAGAATTGCGTAGGTA.................................................................................................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................GACTGTTGGGCCACACCGAGG.................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................TACAGTGCAACGTCTCGTTTATAGCGA....................................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................................................TTGGGCCACACCGAGGATGCCCTGACG......................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................GACTGTTGGGCCACACCGAGGATGCCC.............................................................................................................. 27 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................................................................TACTATTTTGTTGACGCGCACAT................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................................GGGCCACACCGAGGATGCCCTGA........................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................TGTTGGGCCACACCGAGGATGCC............................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................TACAATGTCAAGGAGGAGC....................... 19 0 3 0.33 1 1 0 0 0 0 0 0
......................................................................................TAATACAGTGCAACGTCTCGTTTAT............................................................................................................................................ 25 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................TGTTGGGCCACACCGAGGAT.................................................................................................................. 20 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................................................................................................TTTGTTGACGCGCACATCATCAGCGAC......................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
............................................................................................................................CCACACCGAGGATGCCCTGACGG........................................................................................................ 23 0 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................................................................TTGTTGACGCGCACATCATCAG............................................................. 22 0 3 0.33 1 1 0 0 0 0 0 0
............................................................................................................TATAGCGACTGTTGGGCCACACCGAGGA................................................................................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0
...............................................................................................................AGCGACTGTTGGGCCACACCGAG..................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
.............................................ATTGCGTAGGTAAAGCCTAGAGG....................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................ACAATGTCAAGGAGGAGCACTTTA................. 24 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................................................................................CACATCATCAGCGACAAGCCGCAGGG.............................................. 26 0 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................................................................................TCATTACTATTTTGTTGACGCGCACATCA................................................................. 29 0 3 0.33 1 1 0 0 0 0 0 0
..............................................................TAGAGGAGCCCCAGAAGATTGCTTT.................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
.............................................................CTAGAGGAGCCCCAGAAGATTGCTT..................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................CGACTGTTGGGCCACACCGAGGATGC................................................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................................TGCCCTGACGGAGACCCTCAATCA........................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................CATCATCAGCGACAAGCCGCAGG............................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................TGTTGGGCCACACCGAGGATGCCCTGA........................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................TGGGCCACACCGAGGATGCCCTG............................................................................................................ 23 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................CTTTAATACAGTGCAACGTCTCGTT............................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
..............................................................TAGAGGAGCCCCAGAAGATT......................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TCAAGGAGGAGCACTTTATGTCCCTG......... 26 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATGTCAAGGAGGAGCACTTTATGT.............. 24 0 3 0.33 1 1 0 0 0 0 0 0
................................................................................................CAACGTCTCGTTTATAGCGACTGT................................................................................................................................... 24 0 3 0.33 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................CAAGGAGGAGCACTTTATGTCCCTG......... 25 0 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................................................................TGACGGAGACCCTCAATCAAA......................................................................................... 21 2 3 0.33 1 1 0 0 0 0 0 0
.................................................................................................................CGACTGTTGGGCCACACCGAGGATGCC............................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................................................................................................TTTGTTGACGCGCACATCATCAGCGACA........................................................ 28 0 3 0.33 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................AATGTCAAGGAGGAGCACT.................... 19 0 3 0.33 1 1 0 0 0 0 0 0
..............................................................................................................TAGCGACTGTTGGGCCACACCGAGGC................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0 0
..............................................................TAGAGGAGCCCCAGAAGATTGT....................................................................................................................................................................... 22 1 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................................................................................TCATTACTATTTTGTTGACGCGCA...................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
.............................................................CTAGAGGAGCCCCAGAAGATTG........................................................................................................................................................................ 22 0 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TCAAGGAGGAGCACTTTATGTCCC........... 24 0 3 0.33 1 1 0 0 0 0 0 0
............CTGGCTGCTCCACAATCATT........................................................................................................................................................................................................................... 20 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................................................TTGGGCCACACCGAGGATGCC............................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................................TTGCCGACTGTTGGGCCACACCG....................................................................................................................... 23 3 3 0.33 1 1 0 0 0 0 0 0
..............................................................................................TTCAACGTCTCGTTTATAGCGACTGTC.................................................................................................................................. 27 2 3 0.33 1 0 1 0 0 0 0 0
.......................................................................................................................................................................................TCATCAGCGACAAGCCGCAGGG.............................................. 22 0 3 0.33 1 1 0 0 0 0 0 0
..............................................................TAGAGGAGCCCCAGAAGATTGC....................................................................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATGTCAAGGAGGAGCACT.................... 18 0 3 0.33 1 0 0 1 0 0 0 0
...........................................................................................................TTATAGCGACTGTTGGGCCA............................................................................................................................ 20 0 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................................................................................TGTTGACGCGCACATCATCAGCGACAA....................................................... 27 0 3 0.33 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................ATGTCAAGGAGGAGCACTTCATGTCCC........... 27 1 3 0.33 1 0 0 1 0 0 0 0
.............................................................................................................................................TGACGGAGACCCTCAATCATTACT...................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................AATACAGTGCAACGTCTCGTT............................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................CAAGGAGGAGCACTTCATGTCCCTG......... 25 1 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................................................................TGACGGAGACCCTCAATCATTACTA..................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
................................................................................................................GCGACTGTTGGGCCACACCGAGGA................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0 0
......................................................................................................................................................................GTTTGTTGACGCGCACATCATCAG............................................................. 24 1 3 0.33 1 1 0 0 0 0 0 0
.......................................................................................................................TTGGGCCACACCGAGGATGCCCTGACA......................................................................................................... 27 1 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................................GGGCCACACCGAGGATGCCCTGACGG........................................................................................................ 26 0 3 0.33 1 1 0 0 0 0 0 0
...............................................TGCGTAGGTAAAGCCTAGAGGAGCCC.................................................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0 0
.................TGCTCCACAATCATTGTCAACCAAAAGA.............................................................................................................................................................................................................. 28 0 3 0.33 1 1 0 0 0 0 0 0
.............................................................................................................ATAGCGACTGTTGGGCCACACCGAGG.................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0
..............................................................TAGAGGAGCCCCAGAAGATTGCT...................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
..............................................................................................TGCAACGTCTCGTTTATAGCGACTG.................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................TACAGTGCAACGTCTCGTTTATAGCGAC...................................................................................................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................................................................................................................................TAAGTCCCTGTGCTACGCC 19 1 3 0.33 1 0 0 0 0 0 0 1
.....................................................................................................................TGTTGGGCCACACCGAGGAAA................................................................................................................. 21 2 3 0.33 1 0 0 0 0 0 0 1
..............................TTGTCAACCAAAAGAATTGCGTAGG.................................................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
.........................................................................................................................................................................TGTTGACGCGCACATCATCAGCG........................................................... 23 0 3 0.33 1 1 0 0 0 0 0 0
........................................................................................................................................................................................CATCAGCGACAAGCCGCAGG............................................... 20 0 3 0.33 1 1 0 0 0 0 0 0
............................................................................................................................................................................TGACGCGCACATCATCAGCGACAAGCCG................................................... 28 0 3 0.33 1 1 0 0 0 0 0 0
............................................................................................................................................................................TGACGCGCACATCATCAGCGACAAGC..................................................... 26 0 3 0.33 1 1 0 0 0 0 0 0
...................................................................................................................ACTGTTGGGCCACACCGAGGATG................................................................................................................. 23 0 3 0.33 1 1 0 0 0 0 0 0
...............................................................................................................................CACCGAGGATGCCCTGACGGAGACC................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0 0
.................................TCAACCAAAAGAATTGCAA....................................................................................................................................................................................................... 19 2 4 0.25 1 0 1 0 0 0 0 0
................................................................................................CAGCGTCTCGTTTACACCGA....................................................................................................................................... 20 3 6 0.17 1 1 0 0 0 0 0 0
..........................................................................................................TTAATAGGGACTGTCGGG............................................................................................................................... 18 3 20 0.10 2 1 0 0 0 1 0 0
..........................................................................................................................GGCCACACCGTGGACGCGC.............................................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

TATTGGTCGGCTGACCGACGAGGTGTTAGTAACAGTTGGTTTTCTTAACGCATCCATTTCGGATCTCCTCGGGGTCTTCTAACGAAATTATGTCACGTTGCAGAGCAAATATCGCTGACAACCCGGTGTGGCTCCTACGGGACTGCCTCTGGGAGTTAGTAATGATAAAACAACTGCGCGTGTAGTAGTCGCTGTTCGGCGTCCCGTTTATGTTACAGTTCCTCCTCGTGAAATACAGGGACACGATGCGG
************************************************************.......((((..((((......((((.((..((((((.....((((((....)))..))).....))))))..)).))))......)))).)))).........************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 V112
male body		 M059
embryo
 M062
head
 GSM343916
embryo
....................AGGTGTTAGTAACAGTTGGTTTT................................................................................................................................................................................................................ 23 0 3 13.67 41 26 14 1 0 0 0
...................GAGGTGTTAGTAACAGTTGGTTTT................................................................................................................................................................................................................ 24 0 3 12.33 37 23 12 1 0 0 1
..................CGAGGTGTTAGTAACAGTTGGTTTT................................................................................................................................................................................................................ 25 0 3 9.67 29 19 10 0 0 0 0
........................................................................GGTCTTCTAACGAAATTATGTCAC........................................................................................................................................................... 24 0 3 7.33 22 13 9 0 0 0 0
......................................................................GGGGTCTTCTAACGAAATTATGTCAC........................................................................................................................................................... 26 0 3 5.33 16 11 5 0 0 0 0
.......................................................................GGGTCTTCTAACGAAATTATGTCAC........................................................................................................................................................... 25 0 3 3.33 10 9 1 0 0 0 0
....................................................................................................................................................................................................CGGCGTCCCGTTTATGTTACAGT................................ 23 0 2 3.00 6 4 2 0 0 0 0
.........................................................................GTCTTCTAACGAAATTATGTCAC........................................................................................................................................................... 23 0 3 2.33 7 5 2 0 0 0 0
.....................GGTGTTAGTAACAGTTGGTTTT................................................................................................................................................................................................................ 22 0 3 2.33 7 3 4 0 0 0 0
........................................................................GGTCTTCTAACGAAATTATGTCA............................................................................................................................................................ 23 0 3 1.67 5 5 0 0 0 0 0
......................................................................................................................................................GGGAGTTAGTAATGATAAAACAACTGC.......................................................................... 27 0 3 1.67 5 5 0 0 0 0 0
.......................................................................................................................................................GGAGTTAGTAATGATAAAACAACTGC.......................................................................... 26 0 3 1.67 5 5 0 0 0 0 0
.....................................................................CGGGGTCTTCTAACGAAATTATGTCAC........................................................................................................................................................... 27 0 3 1.33 4 4 0 0 0 0 0
.................ACGAGGTGTTAGTAACAGTTGGTTTT................................................................................................................................................................................................................ 26 0 3 1.00 3 3 0 0 0 0 0
.....................................................................................................................................................................................GTAGTAGTCGCTGTTCGGCGTCCCGTT........................................... 27 0 2 1.00 2 2 0 0 0 0 0
.................................................................................................................................................................................................GTTCGGCGTCCCGTTTATGTTACAGT................................ 26 0 2 1.00 2 0 2 0 0 0 0
............................................................................................................................GGTGTGGCTCCTACGGGACT........................................................................................................... 20 0 3 0.67 2 2 0 0 0 0 0
........................................................................................................................................................GAGTTAGTAATGATAAAACAACTGC.......................................................................... 25 0 3 0.67 2 1 0 1 0 0 0
.........................................................................................................................................................AGTTAGTAATGATAAAACAACTGC.......................................................................... 24 0 3 0.67 2 2 0 0 0 0 0
...................GAGGTGTTAGTAACAGTTGGTTT................................................................................................................................................................................................................. 23 0 3 0.67 2 2 0 0 0 0 0
...................................................................................................................................................................................................................GTTACAGTTCCTCCTCGTGAAGTAC............... 25 1 3 0.67 2 2 0 0 0 0 0
....................AGGTGTTAGTAACAGTTGGTTT................................................................................................................................................................................................................. 22 0 3 0.67 2 2 0 0 0 0 0
...................................................................................................................................................................................................TCGGCGTCCCGTTTATGTTACAGTTCCTC........................... 29 0 2 0.50 1 1 0 0 0 0 0
...........................................................................................................................................................................................................CCGTTTATGTTACAGTTCCTCCT......................... 23 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................................AGTCGCTGTTCGGCGTCCCGTTTAT........................................ 25 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................................................................................................................GCTGTTCGGCGTCCCGTTTATGTTA.................................... 25 0 2 0.50 1 1 0 0 0 0 0
........................................................................................................................................................................................GTAGTCGCTGTTCGGCGTCCCGTT........................................... 24 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................................CGGCGTCCCGTTTATGTTACAG................................. 22 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................................CGGCGTCCCGTTTATGTTACAGTTCC............................. 26 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................TACAGTTCCTCCTCGTGAAGT................. 21 1 3 0.33 1 1 0 0 0 0 0
.................................................GCATCCATTTCGGATCTCCTCGG................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0
.................................................................................................................................GGCTCCTACGGGACTGCCTCT..................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0
....................................................................................................................GACAACCCGGTGTGGCTCCTACGGGAC............................................................................................................ 27 0 3 0.33 1 1 0 0 0 0 0
...........................................................................CTTCTAACGAAATTATGTCACGTT........................................................................................................................................................ 24 0 3 0.33 1 1 0 0 0 0 0
.....................GGTGTCAGTAACAGTTGGTTTT................................................................................................................................................................................................................ 22 1 3 0.33 1 1 0 0 0 0 0
................GACGAGGTGTTAGTAACAGTTGGTTTT................................................................................................................................................................................................................ 27 0 3 0.33 1 1 0 0 0 0 0
...........................................................................................GTCACGTTGCAGAGCAAATAT........................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0
...........................................................................................................................CGGTGTGGCTCCTACGGGACTGCCTC...................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0
..................................................................................................TGCAGAGCAAATATCGCTGACAAC................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................CCTCGTGAAGTACAGGGACACGAT.... 24 1 3 0.33 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................GTGAAGTACAGGGACACGAT.... 20 1 3 0.33 1 1 0 0 0 0 0
.......................................................................................................................................................GGAGTTAGTAATGATAAAACAACTG........................................................................... 25 0 3 0.33 1 1 0 0 0 0 0
.....................................................................................................................................................TGGGAGTTAGTAATGATAAAACAACTGC.......................................................................... 28 0 3 0.33 1 1 0 0 0 0 0
..........................................................................................................................CCGGTGTGGCTCCTACGGGACTGCCTCT..................................................................................................... 28 0 3 0.33 1 1 0 0 0 0 0
.......................................................................................................................................................AGAGTTAGTAATGATAAAACAACTG........................................................................... 25 1 3 0.33 1 1 0 0 0 0 0
...........................................................................................................................................................TTAGTAATGATAAAACAACTGC.......................................................................... 22 0 3 0.33 1 1 0 0 0 0 0
.......................................................................GGGTCTTCTAACGAAATTATGTCA............................................................................................................................................................ 24 0 3 0.33 1 1 0 0 0 0 0
................GACGAGGTGTTAGTAACAGTTGGTTT................................................................................................................................................................................................................. 26 0 3 0.33 1 1 0 0 0 0 0
......................GTGTTAGTAACAGTTGGTTTT................................................................................................................................................................................................................ 21 0 3 0.33 1 1 0 0 0 0 0
........................................................................GGTCTTCTAACGAAATTATGTC............................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0
.............ACCGACGAGGTGTTAGTAACAGT....................................................................................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0
.....................................................................CGGGGTCTTCTAACGAAAT................................................................................................................................................................... 19 0 3 0.33 1 1 0 0 0 0 0
..............................................................................................................ATCGCTGACAACCCGGTGTGGCTCCTAC................................................................................................................. 28 0 3 0.33 1 1 0 0 0 0 0
....GGTCGGCTGACCGACGAGGTGT................................................................................................................................................................................................................................. 22 0 3 0.33 1 1 0 0 0 0 0
....................................................................................................................................................................................................................................TGAAGTACAGGGACACGATC... 20 2 3 0.33 1 1 0 0 0 0 0
....................AGGTGTTAGTAACAGTTTGTTTT................................................................................................................................................................................................................ 23 1 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................TGATAAAACAACTGCGCGTG..................................................................... 20 0 3 0.33 1 1 0 0 0 0 0
..................CGAGGTGTTAGTAACAGTTGGTTT................................................................................................................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0
....................AGGTGTTAGTAACAGTTGGTTGT................................................................................................................................................................................................................ 23 1 3 0.33 1 0 0 0 0 1 0
..............................................................................................................................................CTGCCTCTGGGAGTTAGTAATGAT..................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0
..................................................................................................................CTGACAACCCGGTGTGGCTCCT................................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0
...............CGACGAGGTGTTAGTAACAGT....................................................................................................................................................................................................................... 21 0 3 0.33 1 1 0 0 0 0 0
...................GAGGTGTTAGTAACATTTGGTTTT................................................................................................................................................................................................................ 24 1 3 0.33 1 0 0 1 0 0 0
.............................................................................................................................................GCTGCCTCTGGGAGTTAGTAATG....................................................................................... 23 1 3 0.33 1 1 0 0 0 0 0
....................AGGTGTTAGTAACAGTTGGTT.................................................................................................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0 0
.......TGGCTGACCGACGAGGTGTTAGT............................................................................................................................................................................................................................. 23 1 3 0.33 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................TCCTCCTCGTGAAATACAGGGACACGAT.... 28 0 3 0.33 1 1 0 0 0 0 0
........GGCTGACCGACGAGGTGTTAGTAACAGT....................................................................................................................................................................................................................... 28 0 3 0.33 1 1 0 0 0 0 0
.................ACGAGGTGTTAGTAACAGCTGGTTTT................................................................................................................................................................................................................ 26 1 3 0.33 1 0 1 0 0 0 0
...............................................................................................................................GTGGCTCCTACGGGACTGCCTC...................................................................................................... 22 0 3 0.33 1 1 0 0 0 0 0
..................CGAGGTGTTAGTAACAGTTGGTTGT................................................................................................................................................................................................................ 25 1 3 0.33 1 0 0 0 1 0 0
........................................TTTCTTAACGCATCCATTTCGGAT........................................................................................................................................................................................... 24 0 3 0.33 1 1 0 0 0 0 0
.................................................................................................................................................CCTCTGGGAGTTAGTAAGG....................................................................................... 19 1 3 0.33 1 0 0 0 1 0 0
..........................................................................................................................................................GTTAGTAATGATAAAACAACTGC.......................................................................... 23 0 3 0.33 1 1 0 0 0 0 0
....................AGGTGTTAGTAACAGTTGATTTT................................................................................................................................................................................................................ 23 1 3 0.33 1 1 0 0 0 0 0
...........................................................................CTTCTAACGAAATTATGTCAC........................................................................................................................................................... 21 0 3 0.33 1 0 0 0 0 1 0
............................................TTAACGCATCCATTTCGGATCTCCT...................................................................................................................................................................................... 25 0 3 0.33 1 1 0 0 0 0 0
..................CGAGGTGTTGGTAACAGTTGGTTTT................................................................................................................................................................................................................ 25 1 3 0.33 1 1 0 0 0 0 0
.................................................................................................................................................................................GCGTGTAGTAGTCGCTGT........................................................ 18 0 3 0.33 1 1 0 0 0 0 0
.............ACCGACGAGGTGTTAGTAACAGTTGGTT.................................................................................................................................................................................................................. 28 0 3 0.33 1 1 0 0 0 0 0
.........................................................................................................................................................................ACAACTGCGCGTGTAGTAGTCGCTG......................................................... 25 0 3 0.33 1 1 0 0 0 0 0
..........................................................................................................................AATGTGTGGCTCCTACGGGACT........................................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0
..................AGAGGTGTTAGTAACAGTTGGTTTT................................................................................................................................................................................................................ 25 1 3 0.33 1 1 0 0 0 0 0
..............................................................................................................................................................................CGGGCGTGTAGTAGTCGC........................................................... 18 2 10 0.20 2 2 0 0 0 0 0
........................................................................................................................ACGCGGTGTCGCTCCTATGG............................................................................................................... 20 3 6 0.17 1 0 0 1 0 0 0
......TCGATTGCCCGACGAGGTG.................................................................................................................................................................................................................................. 19 3 20 0.10 2 2 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_779:9367-9617 - dps_2241 ATAACCAGCCGACTGGCTGCTCCACAATCATTGTCAACCAAAAGAATTGCGTAGGTAAAGC--CTAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTGCTTTAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAGCGACTGTTGGGCCACACCGAGGATGCCCTGACGGAGACCCTCAATCATTACTATTTTGTTGACGCGCACATCATCAGCGACAAGCCGCAGGGCAAATACAATGTCAAGGAGGAGCACTTTATGTCCCTGTGCTACGCC
droPer2 scaffold_12065:37-284 + ATAACCAGCCGACTGGCTGCTCCACAATCATTGTCAACCAAAAGAATTGCGTAGGTAAAGC--CTAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTGCTTTAATA---------------------CAG--TGC------------------------G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAGCGACTGTTGGGCCACACCGAGGATGCCCTGACGGAGACCCTCAATCATTACTATTTTGTTGACGCGCACATCATCAGCGACAAGCCGCAGGGCAAATACAATGTCAAGGAGGAGCACTTTATGTCCCTGTGCTACGCC
droWil2 scf2_1100000004909:7504474-7504735 + AGAATCAACCTACAGGCTGTTCCACCATCATAGTCAATCAGAAGGATTGTGTAAGTTCTTTTTCGATTCAAATGTCAAAGAAAATAATAAGAATTTGG----------------------------------------------------------------------------------------T-----------TTGGT----------------------------------------TTTT-TTT-----------------------------------------------------------------------------TTTGTT-G--GTTAAGCGTGTTTTGGGACATACCGAGGATGCCTTGACAGAGACATTGAATCATTATTATTTTGTGGTCGCTCACATTATCAGTGATAAGCCACAGGGTAAGTATAATGTGAAGGAGGAGCATTTCATGTCCCTGTGCTATGCT
droVir3 scaffold_12932:1853267-1853519 + AAAACCAACCCACCGGCTGCTCCTCGATTATTGTTAACCAAAAGCATTGCGTAAGTACC-----TAGAAATATGTTAATGGATATG---TTAACG----------------------------------------------------------------------------------------TAATCGG---------------AATATTG--------------------------------------TC-----------------------------------------------------------------------------CA-TTGG--CGCCAGCGTCTGCTGGGCCACACGGAGGACGCACTGACGGAGACGCTTAATCATTACTACTTTGTGGTTGCGCACATCATCAGCGACAAGCCGCAGGGCAAATACAATGTCAAGGAGGAGCATTTCATGTCGCTCTGCTATGCC
droMoj3 scaffold_6473:5414097-5414349 + AAATTCAACCCACGGGCTGCTCCACGATTATTGTTAATCATAAGCATTGTGTAAGTATAA------------------------------------------------------------------------------------------------TA---------------------GAC--TAT------------------AAT---GTTTATT-TGCACTGACTCTGCCACGATCG-AGT-TTTTAT--------------------------------------------------------------------------------------CCTCAGCGCCTGCTGGGCCACACCGAGGATGCTCTCACAGAGACGCTGAATCATTATTACTTTGTGGTCGCCCACATCATTAGTGACAAGCCGCAGGGCAAGTACAATGTGAAGGAGGAGCACTTTATGTCCCTCTGCTATGCC
droGri2 scaffold_15203:4042030-4042289 + AGAATCAACCCACCGGCTGCTCCTCAATCATTGTCAATCAGAAGCATTGTGTAAGTGTTCCAATCATTTATATATTTATACACACATGGCGAACC----------------------------------------------------------------------------------------TAAT-----------CT---------------------------------------CG-GGTTT-TTTT-----------------------------------------------------------------------------TT-TT----GGCTAGCGTCTGCTGGGCCACACAGAGGATGCTCTCACGGAGACGCTGAATCATTACTACTTTGTGGTGGCGCACATTATTAGTGACAAGCCGCAGGGCAAGTATAATGTGAAGGAAGAGCATTTTATGTCCCTATGCTATGCT
droAna3 scaffold_13047:977991-978236 - AGAACCAGCCCACTGGCTGCTCCACCATCATAGTGAACCAAAAGAACTGCGTAAGCTT-------ACAGAGCTCTTGATGGAC-----------------------------------------------------------------------------------------------------TATCCTGATCTAACTTAAGTGAAT-------------------------------------------------G-----------------------------------------------------------------------------T--TTCCAGCGTCTTTTGGGCCACACGGAGGACGCCCTGACGGAGACCCTCAACCACTACTACTTCGTGGTGGCCCACATCGTCAGCGACAAGCCTCAGGGCAAGTACAACGTCAAGGAGGAGCACTTCATGTCGCTCTGCTACGCA
droBip1 scf7180000396431:752254-752499 - AGAACCAGCCCACTGGCTGCTCCACCATCATAGTGAACCAGAAGAATTGCGTAAGCTTG-------TAGAACTCTTATTGGAC-----------------------------------------------------------------------------------------------------AATCGGGATCTAACTTAGG----------------------------------------TTAT--T-------A-----------------------------------------------------------------------------T--TTCCAGCGACTTTTGGGCCACACAGAGGACGCCCTAACGGAGACCCTTAACCATTACTACTTCGTGGTGGCCCACATCATCAGCGACAAGCCGCAGGGCAAATACAATGTCAAGGAGGAGCACTTCATGTCCCTCTGCTACGCA
droKik1 scf7180000302344:1489308-1489574 - AGAACCAACCAACCGGCTGCTCCACGATCATTGTCAACCACAAAAATTGCGTGAGTTAAA-------------------TAAAATTAAACAAATCTACTCTGATTAATAATATTCT------------AATTTTTTTATGTTTGTTTTTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT----CGTCAGCGCCTGCTGGGCCACACCGAAGATGCCCTGACAGAGACTCTTAACCATTACTACTTTGTGGATGCCCACATTATCAGCGACAAGCCGCAGGGCAAGTACAACGTGAAGGAGGAGCACTTTATGTCCCTGTGCTATGCC
droFic1 scf7180000453829:229861-230136 - AAAATCAACCCACTGGTTGCTCCACAATCATAGTTAATCAGAAGAATTGCGTGAGTGAC-----------------------------------------------------------------------------------TAAGCT--------------------------------------------------------------------------------------ATA--------------TTTTAGA----------ATGTTTAACTATTCAAATATTAATATTAATAACTAATTAATATAATTAATATATA---------T--T--TTATAGCGACTGTTGGGACACACGGAGGATGCCCTGACGGAGACCCTTAATCACTACTACTTTGTGGTGGCTCACATCATCAGTGACAAGCCTCAGGGCAAATACAACGTGAAGGAGGAGCACTTCATGTCCTTGTGCTACGCA
droEle1 scf7180000491018:165597-165737 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCGCCTGCTGGGCCACACGGAGGATGCCCTGACGGAGACCCTCAACCATTACTACTTCGTGGTGGCCCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTGAAGGAGGAGCACTTCATGTCCCTGTGCTACGCA
droRho1 scf7180000779966:4967-5229 - AGAACCAACCCACTGGATGCTCCACGATTGTCGTCAACCAGAAGAATTGCGTGAGTAAAAC--C---------CT--------------------TGG----------------------------------------------------------------------------------------C-----------TTGGG-----------------------------------------------------------------A--------TATTTATAAATTAATTTTAATATTCAATTAT-------------TTGTGGACTTGC-GG--CGATAGCGCCTGTTGGGCCACACGGAGGATGCCCTGACGGAGACCCTCAACCATTACTACTTCGTGGTGGCCCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTGAAGGAGGAGCACTTCATGTCCTTGTGCTACGCA
droBia1 scf7180000301760:5080839-5081101 - AGAACCAGCCCACCGGCTGCTCCACGATCATTGTGAACCAGAAGAACTGCGTGAGTGTC-----------------------------------------------------------------------------------TGGGCTGCTAG---TAGTTTCCATACATTTTGAGCCAGACGTAAT-----------------GAAT----------------------------A--------------TTTCGGA----------AT---------------------------------------------------TC---------T--C--CGACAGCGCCTGCTGGGCCACACCGAGGACGCCCTGACGGAGACCCTGAACCACTACTACTTCGTGGTGGCCCACATCCTCAGCGACAAGCCGCAGGGCAAGTACAACGTGAAGGAGGAGCACTTCATGTCCCTCTGCTACGCC
droTak1 scf7180000415696:62246-62507 - AAAACCAACCCACCGGCTGCTCCACGATCATTGTCAACCAGAAGAATTGCGTGAGTAGATTTTGAATTTTTA-------TAATATTTA------------TAATTAGTAATATTTTTTAATTTAATTTAATA-------------TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--T--TAATAGCGTCTCTTGGGCCACACCGAGGATGCCCTCACGGAGACCCTCAACCACTACTACTTCGTGGTGGCCCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTGAAGGAGGAGCACTTCATGTCCCTCTGCTACGCC
droEug1 scf7180000409032:850459-850704 + AGAACCAACCCACCGGCTGTTCCACGATCATTGTCAACCAGAAGAATTGCGTAAGTTTTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTTAAACTATA--------TATATATATATTT--------ATTTAACTAT-------------TC---------TT----GGTTAGCGCCTGCTGGGCCACACCGAGGATGCTCTGACGGAGACTCTCAACCATTACTATTTCGTGGTTGCCCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTCAAGGAGGAGCACTTTATGTCCTTGTGCTACGCC
dm3 chrX:9113083-9113335 - AAAACCAACCAACCGGCTGCTCCACCATCATTGTTAACCAAAAGAATTGCGTGAGTGAA-----------------------------------------------------------------------------------TGGAATGGCTT------------------------------------------------------------TAATCTTGAATTGGTCAT-TAAATAACGTATC-TTATATC--T----------------------------------------------------------------------------------CAATAGCGCCTTTTGGGCCACACGGAGGATGCACTGACGGAGACCCTGAATCACTACTACTTCGTGGTGGCACACATCATCAGTGACAAGCCGCAGGGCAAGTACAACGTTAAGGAGGAGCACTTCATGTCCCTCTGCTACGCT
droSim2 x:8658705-8658957 - AAAACCAACCCACCGGCTGTTCCACCATCATTGTTAACCAAAAGAATTGCGTGAGTGGA-----------------------------------------------------------------------------------TGGGATGGCAT------------------------------------------------------------TAATC-TGAATTGGTCAT-TAAATATCGCATC-TTATATC--TCA---------------------------------------------------------------------------------TTTAGCGCCTTTTGGGCCACACGGAGGATGCGCTGACGGAGACCCTGAATCACTACTACTTCGTGGTGGCGCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTCAAGGAGGAGCACTTCATGTCCCTCTGCTACGCC
droSec2 scaffold_68:1575-1827 - AAAACCAACCCACCGGCTGCTCCACCATCATTGTTAACCAAAAGAATTGCGTAAGTGAA-----------------------------------------------------------------------------------TGTAATGGCAT------------------------------------------------------------TAATC-TGAATTGGTCAT-TAAATATCGTATC-TTATATC--TCA---------------------------------------------------------------------------------TTTAGCGCCTTTTGGGCCACACGGAGGATGCGCTGACGGAGACCCTGAATCACTACTACTTCGTGGTGGCGCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTCAAGGAGGAGCACTTCATGTCCCTCTGTTACGCC
droYak3 X:17709634-17709879 - AAAACCAACCCACCGGCTGTTCCACCATCATTGTCAACCAGAAGAATTGCGTGAGTGAT-----------------------------------------------------------------------------------TGCGTTTTGAT------------------------------------------------------------TGATT-GGAATCAGTTAT-TAAATAT------------------A-----------------------------TTT--------A------------------------------------TCTCGATAGCGCCTTTTGGGGCACACGGAGGATGCGCTGACGGAGACCCTGAATCACTACTACTTCGTGGTGGCCCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTCAAGGAGGAGCACTTCATGTCCCTCTGCTACGCC
droEre2 scaffold_4690:6003147-6003390 + AAAACCAACCCACCGGCTGCTCCACCATCATTGTCAACCAGAGGAATTGCGTGAGTGGA-----------------------------------------------------------------------------------TGCGATTTGAT------------------------------------------------------------CAATC-TGAATTGACTAT-TAAATG---------TACAAC--T----------------------------------------------------------------------------------CAATAGCGACTGTTGGGCCACACGGAGGATGCGCTCACGGAGACCCTGAACCACTACTACTTCGTGGTGGCCCACATCATCAGCGATAAGCCGCAGGGCAAGTACAACGTCAAGGAGGAGCACTTCATGTCCCTCTGCTACGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
ATAACCAGCCGACTGGCTGCTCCACAATCATTGTCAACCAAAAGAATTGCGTAGGTAAAGC--CTAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTGCTTTAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAGCGACTGTTGGGCCACACCGAGGATGCCCTGACGGAGACCCTCAATCATTACTATTTTGTTGACGCGCACATCATCAGCGACAAGCCGCAGGGCAAATACAATGTCAAGGAGGAGCACTTTATGTCCCTGTGCTACGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGACGCGCACATCATCAGC............................................................2438.002402220000000
.........................................................................................................................................................TAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--T...............................................................................................................................................2238.002402210001000
.........................................................................................................................................................TAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TT..............................................................................................................................................2336.672001800011000
.................................TCAACCAAAAGAATTGCGTAGGTAAAGC--...................................................................................................................................................................................................................................................................................................................................................................................................................................2835.331601411000000
.................................TCAACCAAAAGAATTGCGTAGGTAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................2735.001501500000000
.................................TCAACCAAAAGAATTGCGTAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2234.331301100002000
...............................................................................................................................................................................................................................................................................................................................................................TGGGCCACACCGAGGATGCCCTGACGG........................................................................................................2734.001201200000000
.................................TCAACCAAAAGAATTGCGTAGGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2433.331001000000000
...............................................................................................................................................................................................................................................................................................................................................................TGGGCCACACCGAGGATGCCCTGACG.........................................................................................................2633.0090900000000
.........................................................................................................................................................TAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTA.............................................................................................................................................2433.0090900000000
................................................................TAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTG............................................................................................................................................................................................................................................................................................................................................2133.0090900000000
.........................................................................................................................................................TAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--................................................................................................................................................2132.3370700000000
.................................TCAACCAAAAGAATTGCGTAGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2332.0060600000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGACGCGCACATCATCAGCGA..........................................................2632.0060600000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGACGCGCACATCATCAG.............................................................2332.0060600000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGTCAAGGAGGAGCACTT...................2331.6750500000000
...................................................................................................................................................................................................................................................................................................................................................TATAGCGACTGTTGGGCCACACCGA......................................................................................................................2531.6750500000000
...............................................................................................................................................................................................................................................................................................................................................................TGGGCCACACCGAGGATGCCCTGAC..........................................................................................................2531.6750500000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGACGCGCACATCATCA..............................................................2231.3340400000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACCGAGGATGCCCTGAC..........................................................................................................2631.3340300010000
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACCGAGGATGCCCTGA...........................................................................................................2531.3340310000000
.........................................................................................................................................................TAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAG..........................................................................................................................................2731.3340400000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGACGCGCACATCATCAGCG...........................................................2531.3340300001000
..........................................................................................................................................................AATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TT..............................................................................................................................................2231.3340400000000
.....................................................................................................................................................................................................................................................................................................................................................TAGCGACTGTTGGGCCACACCGAG.....................................................................................................................2431.0030300000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGACGCGCACATCATCA..............................................................2131.0030300000000
............................................................................................................................................................TA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAG..........................................................................................................................................2431.0030200000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGCAAATACAATGTCAAGGAGGAG........................2721.0020200000000
.....................................................................................................................................................................................................................................................................................................................................................TAGCGACTGTTGGGCCACACCGAGG....................................................................................................................2531.0030300000000
..................................CAACCAAAAGAATTGCGTAGGTAAAGC--...................................................................................................................................................................................................................................................................................................................................................................................................................................2731.0030300000000
.....................................................................................................................................................................................................................................................................................................................................................TAGCGACTGTTGGGCCACACCGAGGA...................................................................................................................2631.0030300000000
........................................................................................................................................................................................................................................................................................................................................................................................................TACTATTTTGTTGACGCGCACATCA.................................................................2531.0030300000000
.........................................................................................................................................................TAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATA...........................................................................................................................................2631.0030300000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGACGCGCACATCATCAGCGT..........................................................2630.6720100010000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGACGCGCACATCATCAGCGACAA.......................................................2830.6720200000000
.................................TCAACCAAAAGAATTGCGTAGGTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2630.6720200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGACGCGCACATCATCAGCG...........................................................2430.6720200000000
.........................................................................................................................................................TAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAGC.........................................................................................................................................2830.6720110000000
...............................................................................................................................................................................................................................................................................................................................................................TGGGCCACACCGAGGATGCCCTGACGGA.......................................................................................................2830.6720200000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACCGAGGATGCCC..............................................................................................................2230.6720200000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACCGAGGATGCCCTGACGG........................................................................................................2830.6720200000000
..........................................................................................................................................................................................................................................................................................................................................................ACTGTTGGGCCACACCGAGGATGCCC..............................................................................................................2630.6720101000000
................................................................TAGAG----------GAGCCCCAGAAGA-------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................1830.6720200000000
.................................................................AGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTG............................................................................................................................................................................................................................................................................................................................................2030.6720200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGACGCGCACATCATCAGCGA..........................................................2530.6720200000000
................................................................TAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTGCTT.........................................................................................................................................................................................................................................................................................................................................2430.6720200000000
............................................................................................................................................................................................................................................................................................................................................................TGTTGGGCCACACCGAGGATG.................................................................................................................2130.6720200000000
.................................TCAACCAAAAGAATTGCGTAGGTAAAGC--C..................................................................................................................................................................................................................................................................................................................................................................................................................................2930.6720101000000
...............................................................................................................................................................................................................................................................................................................................................................................TGCCCTGACGGAGACCCTCAATCAT..........................................................................................2530.6720200000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGACGCGCACATCATCAGCGACA........................................................2630.6720200000000
............................................................................................................................................................................................................................................................................................................................................................TGTTGGGCCACACCGAGGATGCCC..............................................................................................................2430.6720200000000
.................................TCAACCAAAAGAATTGCGTAGGTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................2530.6720200000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAAGGAGGAGCACTTTATGTCCCTG.........2830.6720200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCGACAAGCCGCAGGGCAAAT.........................................2420.5010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAGCGACAAGCCGCAGGGCAAA..........................................2620.5010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAGCGACAAGCCGCAGGGC.............................................2420.5010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCCGCAGGGCAAATACAATGTCAA...............................2720.5010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAATACAATGTCAAGGAGGAGCA......................2620.5010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCGCAGGGCAAATACAATGTCAA...............................2620.5010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCCGCAGGGCAAATACAAT....................................2220.5010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGCAGGGCAAATACAATGTCAA...............................2520.5010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGACGCGCACATCATCAGCGAC.........................................................2530.3310100000000
.TAACCAGCCGACTGGCTGCTCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310100000000
.................................................................................................................................................................................................................................................................................................................................................................GGCCACACCGAGGATGCCCTGACGG........................................................................................................2530.3310100000000
.....................................................................................................................................................................................................................................................................................................................................................................ACACCGAGGATGCCCTGACGGAGACCC..................................................................................................2730.3310100000000
.....................................................................................................................................................................................G--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAG..........................................................................................................................................2030.3310000000100
...........................................................................................................................................................................................................................................................................................................................................................CTGTTGGGCCACACCGAGGATGCCC..............................................................................................................2530.3310100000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGACGCGCACATCATCAGC............................................................2230.3310100000000
..................................CAACCAAAAGAATTGCGTAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310100000000
................................................................TAGAG----------GAGCCCCAGAAGA-------------------------------------------------------T..............................................................................................................................................................................................................................................................................................................................................1930.3310100000000
............................................................................................................................................................................................................................................................................................................................................................................GGATGCCCTGACGGAGACC...................................................................................................1930.3310100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGTCAAGGAGGAGCACTTTA.................2530.3310100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGACGCGCACATCATAG..............................................................2230.3310100000000
.....................................................................................................................................................................................................................................................................................................................................................................ACACCGAGGATGCCCTGACGGAG......................................................................................................2330.3310100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GCACATCATCAGCGACAAGCCGCAGGG..............................................2730.3310100000000
.............................ATTGTCAACCAAAAGAATTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAAGGAGGAGCACTTTATGTCCC...........2630.3310100000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATCATTACTATTTTGTTGACGCGCAC.....................................................................2630.3310100000000
...................................................................................................................................................................................................................................................................................................................................................TATAGCGACTGTTGGGCCACACCGAG.....................................................................................................................2630.3310000000100
...............................................TGCGTAGGTAAAGC--CTAGAG----------GAGCC..............................................................................................................................................................................................................................................................................................................................................................................................................2530.3310100000000
.....................................................................................................................................................................................................................................................................................................................................................................ACACCGAGGATGCCCTGACGGAGACC...................................................................................................2630.3310100000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACCGAGGATGC................................................................................................................2030.3310100000000
.........................................................................................................................................................................................................................................................................................................................................................GACTGTTGGGCCACACCGAGGAT..................................................................................................................2330.3310100000000
.........................................AAGAATTGCGTAGGTAAAGC--...................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310100000000
......................................CAAAAGAATTGCGTAGGTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310100000000
.........................................................................................................................................................................................................................................................................................................................................................GACTGTTGGGCCACACCGAGG....................................................................................................................2130.3310100000000
............................................................................................................................................................TA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAGCGA.......................................................................................................................................2730.3310100000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACCGAGGATGCCCTGACG.........................................................................................................2730.3310100000000
.........................................................................................................................................................................................................................................................................................................................................................GACTGTTGGGCCACACCGAGGATGCCC..............................................................................................................2730.3310100000000
........................................................................................................................................................................................................................................................................................................................................................................................................TACTATTTTGTTGACGCGCACAT...................................................................2330.3310100000000
................................................................................................................................................................................................................................................................................................................................................................GGGCCACACCGAGGATGCCCTGA...........................................................................................................2330.3310100000000
............................................................................................................................................................................................................................................................................................................................................................TGTTGGGCCACACCGAGGATGCC...............................................................................................................2330.3310100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATGTCAAGGAGGAGC.......................1930.3310100000000
.........................................................................................................................................................TAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTAT............................................................................................................................................2530.3310100000000
............................................................................................................................................................................................................................................................................................................................................................TGTTGGGCCACACCGAGGAT..................................................................................................................2030.3310100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGACGCGCACATCATCAGCGAC.........................................................2730.3310100000000
...................................................................................................................................................................................................................................................................................................................................................................CCACACCGAGGATGCCCTGACGG........................................................................................................2330.3310100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGACGCGCACATCATCAG.............................................................2230.3310100000000
...................................................................................................................................................................................................................................................................................................................................................TATAGCGACTGTTGGGCCACACCGAGGA...................................................................................................................2830.3310100000000
......................................................................................................................................................................................................................................................................................................................................................AGCGACTGTTGGGCCACACCGAG.....................................................................................................................2330.3310100000000
.............................................ATTGCGTAGGTAAAGC--CTAGAG----------G..................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATGTCAAGGAGGAGCACTTTA.................2430.3310100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CACATCATCAGCGACAAGCCGCAGGG..............................................2630.3310100000000
....................................................................................................................................................................................................................................................................................................................................................................................................TCATTACTATTTTGTTGACGCGCACATCA.................................................................2930.3310100000000
................................................................TAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTGCTTT........................................................................................................................................................................................................................................................................................................................................2530.3310100000000
...............................................................CTAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTGCTT.........................................................................................................................................................................................................................................................................................................................................2530.3310100000000
........................................................................................................................................................................................................................................................................................................................................................CGACTGTTGGGCCACACCGAGGATGC................................................................................................................2630.3310100000000
...............................................................................................................................................................................................................................................................................................................................................................................TGCCCTGACGGAGACCCTCAATCA...........................................................................................2430.3310100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCAGCGACAAGCCGCAGG...............................................2330.3310100000000
............................................................................................................................................................................................................................................................................................................................................................TGTTGGGCCACACCGAGGATGCCCTGA...........................................................................................................2730.3310100000000
...............................................................................................................................................................................................................................................................................................................................................................TGGGCCACACCGAGGATGCCCTG............................................................................................................2330.3310100000000
......................................................................................................................................................CTTTAATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--T...............................................................................................................................................2530.3310100000000
................................................................TAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TT.............................................................................................................................................................................................................................................................................................................................................2030.3310100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGGAGGAGCACTTTATGTCCCTG.........2630.3310100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAAGGAGGAGCACTTTATGT..............2430.3310100000000
..........................................................................................................................................................................................C------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAGCGACTGT...................................................................................................................................2430.3310010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGGAGGAGCACTTTATGTCCCTG.........2530.3310100000000
....................................................................................................................................................................................................................................................................................................................................................................................TGACGGAGACCCTCAATCAAA.........................................................................................2130.3310100000000
........................................................................................................................................................................................................................................................................................................................................................CGACTGTTGGGCCACACCGAGGATGCC...............................................................................................................2730.3310100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTGACGCGCACATCATCAGCGACA........................................................2830.3310100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTCAAGGAGGAGCACT....................1930.3310100000000
.....................................................................................................................................................................................................................................................................................................................................................TAGCGACTGTTGGGCCACACCGAGGC...................................................................................................................2630.3310100000000
................................................................TAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTGT...........................................................................................................................................................................................................................................................................................................................................2230.3310100000000
....................................................................................................................................................................................................................................................................................................................................................................................................TCATTACTATTTTGTTGACGCGCA......................................................................2430.3310100000000
...............................................................CTAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTG............................................................................................................................................................................................................................................................................................................................................2230.3310100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGGAGGAGCACTTTATGTCCC...........2430.3310100000000
............CTGGCTGCTCCACAATCATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310100000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACCGAGGATGCC...............................................................................................................2130.3310100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAGCGACAAGCCGCAGGG..............................................2230.3310100000000
................................................................TAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTGC...........................................................................................................................................................................................................................................................................................................................................2230.3310100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAAGGAGGAGCACT....................1830.3310001000000
..................................................................................................................................................................................................................................................................................................................................................TTATAGCGACTGTTGGGCCA............................................................................................................................2030.3310100000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGACGCGCACATCATCAGCGACAA.......................................................2730.3310100000000
....................................................................................................................................................................................................................................................................................................................................................................................TGACGGAGACCCTCAATCATTACT......................................................................................2430.3310100000000
..........................................................................................................................................................AATA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--T...............................................................................................................................................2130.3310100000000
....................................................................................................................................................................................................................................................................................................................................................................................TGACGGAGACCCTCAATCATTACTA.....................................................................................2530.3310100000000
.......................................................................................................................................................................................................................................................................................................................................................GCGACTGTTGGGCCACACCGAGGA...................................................................................................................2430.3310100000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACCGAGGATGCCCTGACA.........................................................................................................2730.3310100000000
................................................................................................................................................................................................................................................................................................................................................................GGGCCACACCGAGGATGCCCTGACGG........................................................................................................2630.3310100000000
...............................................TGCGTAGGTAAAGC--CTAGAG----------GAGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................2630.3310100000000
.................TGCTCCACAATCATTGTCAACCAAAAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2830.3310100000000
....................................................................................................................................................................................................................................................................................................................................................ATAGCGACTGTTGGGCCACACCGAGG....................................................................................................................2630.3310100000000
................................................................TAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTGCT..........................................................................................................................................................................................................................................................................................................................................2330.3310100000000
........................................................................................................................................................................................TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAGCGACTG....................................................................................................................................2530.3310100000000
............................................................................................................................................................TA---------------------CAG--TGC------------------AAC---G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAGCGAC......................................................................................................................................2830.3310100000000
............................................................................................................................................................................................................................................................................................................................................................TGTTGGGCCACACCGAGGAAA.................................................................................................................2130.3310000100000
..............................TTGTCAACCAAAAGAATTGCGTAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2530.3310100000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGACGCGCACATCATCAGCG...........................................................2330.3310100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCGACAAGCCGCAGG...............................................2030.3310100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCGCACATCATCAGCGACAAGCCG...................................................2830.3310100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCGCACATCATCAGCGACAAGC.....................................................2630.3310100000000
..........................................................................................................................................................................................................................................................................................................................................................ACTGTTGGGCCACACCGAGGATG.................................................................................................................2330.3310100000000
......................................................................................................................................................................................................................................................................................................................................................................CACCGAGGATGCCCTGACGGAGACC...................................................................................................2530.3310100000000
.................................TCAACCAAAAGAATTGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510010000000
droPer2
ATAACCAGCCGACTGGCTGCTCCACAATCATTGTCAACCAAAAGAATTGCGTAGGTAAAGC--CTAGAG----------GAGCCCCAGAAGA-------------------------------------------------------TTGCTTTAATA---------------------CAG--TGC------------------------G---------------------------------------TC--TCG-----------------------------------------------------------------------------T--TTATAGCGACTGTTGGGCCACACCGAGGATGCCCTGACGGAGACCCTCAATCATTACTATTTTGTTGACGCGCACATCATCAGCGACAAGCCGCAGGGCAAATACAATGTCAAGGAGGAGCACTTTATGTCCCTGTGCTACGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................TGCTCCACAATCATTGTCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAAGCCGCAGGGCAAATACAATGT..................................2711.001010000
..........GACTGGCTGCTCCACAATCATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAATGTCAAGGAGGAGCACT....................2320.501000100
............................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCAGCGACAAGCCGCAG................................................2220.501001000
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGACGCGCACATCATCAGC............................................................2320.501010000
droWil2
AGAATCAACCTACAGGCTGTTCCACCATCATAGTCAATCAGAAGGATTGTGTAAGTTCTTTTTCGATTCAAATGTCAAAGAAAATAATAAGAATTTGG----------------------------------------------------------------------------------------T-----------TTGGT----------------------------------------TTTT-TTT-----------------------------------------------------------------------------TTTGTT-G--GTTAAGCGTGTTTTGGGACATACCGAGGATGCCTTGACAGAGACATTGAATCATTATTATTTTGTGGTCGCTCACATTATCAGTGATAAGCCACAGGGTAAGTATAATGTGAAGGAGGAGCATTTCATGTCCCTGTGCTATGCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................CCATCATAGTCAATCAGAAGGATTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200002
......................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAGCCACAGGGTAAGTAT.......................................2111.00100001
............................................................................................................................................................................................................................................................................................................................................................................................................................CATTATCAGTGATAAGCCACAG................................................2211.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................TTATTATTTTGTGGTCGCT........................................................................1911.00110000
............................CATAGTCAATCAGAAGGATTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
..................................................................................................................................................................................................................................................................................................................................................................................................AATCATTATTATTTTGTGGTCGCC........................................................................2411.00110000
...........................TCATAGTCAATCAGAAGGATTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001
droVir3
AAAACCAACCCACCGGCTGCTCCTCGATTATTGTTAACCAAAAGCATTGCGTAAGTACC-----TAGAAATATGTTAATGGATATG---TTAACG----------------------------------------------------------------------------------------TAATCGG---------------AATATTG--------------------------------------TC-----------------------------------------------------------------------------CA-TTGG--CGCCAGCGTCTGCTGGGCCACACGGAGGACGCACTGACGGAGACGCTTAATCATTACTACTTTGTGGTTGCGCACATCATCAGCGACAAGCCGCAGGGCAAATACAATGTCAAGGAGGAGCATTTCATGTCGCTCTGCTATGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....CAACCCACCGGCTGCTCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004000000000000000000000000000000000000000000000000000000000000004
...........................................................................................................................................................................................................................................................................................................................................................................................................................ACATCATCAGCGACAAGCCGC..................................................2111.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCGACAAGCCGCAGGGCAA...........................................2311.001000000000000000001000000000000000000000000000000000000000000000
..............GGCTGCTCCTCGATTATTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................GCCACACGGAGGACGCACT.............................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................ACTGACGGAGACGCTTAATC............................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
AAATTCAACCCACGGGCTGCTCCACGATTATTGTTAATCATAAGCATTGTGTAAGTATAA------------------------------------------------------------------------------------------------TA---------------------GAC--TAT------------------AAT---GTTTATT-TGCACTGACTCTGCCACGATCG-AGT-TTTTAT--------------------------------------------------------------------------------------CCTCAGCGCCTGCTGGGCCACACCGAGGATGCTCTCACAGAGACGCTGAATCATTATTACTTTGTGGTCGCCCACATCATTAGTGACAAGCCGCAGGGCAAGTACAATGTGAAGGAGGAGCACTTTATGTCCCTCTGCTATGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................CGCCTGCTGGGCCACACCGAGGATG.................................................................................................................2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACTTTATGTCCCTCTGCTATGCC2611.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAAGCCGCAGGGCAAG..........................................2011.001000001
..ATTCAACCCACGGGCTGCTCCACGATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............................................................................................................................................................................................................................................................................................................................................................TGCTGGGCCACACCGAGGATG.................................................................................................................2111.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................CATTATTACTTTGTGGTCGCCCAC.....................................................................2411.001100000
droGri2
AGAATCAACCCACCGGCTGCTCCTCAATCATTGTCAATCAGAAGCATTGTGTAAGTGTTCCAATCATTTATATATTTATACACACATGGCGAACC----------------------------------------------------------------------------------------TAAT-----------CT---------------------------------------CG-GGTTT-TTTT-----------------------------------------------------------------------------TT-TT----GGCTAGCGTCTGCTGGGCCACACAGAGGATGCTCTCACGGAGACGCTGAATCATTACTACTTTGTGGTGGCGCACATTATTAGTGACAAGCCGCAGGGCAAGTATAATGTGAAGGAAGAGCATTTTATGTCCCTATGCTATGCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........CCCACCGGCTGCTCCTCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
...................................................................................................................................................................................................................................................................................................................................................................................CTCACGGAGACGCTGAATCA...........................................................................................2011.00110
............................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGTGGTGGCGCACATTATTAGTG...........................................................2711.00110
droAna3
AGAACCAGCCCACTGGCTGCTCCACCATCATAGTGAACCAAAAGAACTGCGTAAGCTT-------ACAGAGCTCTTGATGGAC-----------------------------------------------------------------------------------------------------TATCCTGATCTAACTTAAGTGAAT-------------------------------------------------G-----------------------------------------------------------------------------T--TTCCAGCGTCTTTTGGGCCACACGGAGGACGCCCTGACGGAGACCCTCAACCACTACTACTTCGTGGTGGCCCACATCGTCAGCGACAAGCCTCAGGGCAAGTACAACGTCAAGGAGGAGCACTTCATGTCGCTCTGCTACGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................GCCACACGGAGGACGCCCTGA...........................................................................................................2111.001000010
.....................................................................................................................................................................................................................................................................................................................................................................ACACGGAGGACGCCCTGACGGAGACCC..................................................................................................2711.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................CGTCAGCGACAAGCCTCAGGGCAAG..........................................2511.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................TACTACTTCGTGGTGGCCCACA....................................................................2211.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCAAGGAGGAGCACTTCA.................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGTACAACGTCAAGGAGGA.........................2211.001000001
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACGGAGGACGCCCC.............................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGCAAGTACAACGTCAAGG.............................2211.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAACGTCAAGGAGGA.........................1811.001100000
............................................................................................................................................................................................................................................................................................................................................................................GGACGCCCTGACGGAGACCC..................................................................................................2011.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGACAAGCCTCAGGGCAAG..........................................2411.001000001
droBip1
AGAACCAGCCCACTGGCTGCTCCACCATCATAGTGAACCAGAAGAATTGCGTAAGCTTG-------TAGAACTCTTATTGGAC-----------------------------------------------------------------------------------------------------AATCGGGATCTAACTTAGG----------------------------------------TTAT--T-------A-----------------------------------------------------------------------------T--TTCCAGCGACTTTTGGGCCACACAGAGGACGCCCTAACGGAGACCCTTAACCATTACTACTTCGTGGTGGCCCACATCATCAGCGACAAGCCGCAGGGCAAATACAATGTCAAGGAGGAGCACTTCATGTCCCTCTGCTACGCASizeHit CountTotal NormTotal
No Reads
droKik1
AGAACCAACCAACCGGCTGCTCCACGATCATTGTCAACCACAAAAATTGCGTGAGTTAAA-------------------TAAAATTAAACAAATCTACTCTGATTAATAATATTCT------------AATTTTTTTATGTTTGTTTTTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT----CGTCAGCGCCTGCTGGGCCACACCGAAGATGCCCTGACAGAGACTCTTAACCATTACTACTTTGTGGATGCCCACATTATCAGCGACAAGCCGCAGGGCAAGTACAACGTGAAGGAGGAGCACTTTATGTCCCTGTGCTATGCCSizeHit CountTotal NormTotal
No Reads
droFic1
AAAATCAACCCACTGGTTGCTCCACAATCATAGTTAATCAGAAGAATTGCGTGAGTGAC-----------------------------------------------------------------------------------TAAGCT--------------------------------------------------------------------------------------ATA--------------TTTTAGA----------ATGTTTAACTATTCAAATATTAATATTAATAACTAATTAATATAATTAATATATA---------T--T--TTATAGCGACTGTTGGGACACACGGAGGATGCCCTGACGGAGACCCTTAATCACTACTACTTTGTGGTGGCTCACATCATCAGTGACAAGCCTCAGGGCAAATACAACGTGAAGGAGGAGCACTTCATGTCCTTGTGCTACGCASizeHit CountTotal NormTotal
No Reads
droEle1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCGCCTGCTGGGCCACACGGAGGATGCCCTGACGGAGACCCTCAACCATTACTACTTCGTGGTGGCCCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTGAAGGAGGAGCACTTCATGTCCCTGTGCTACGCASizeHit CountTotal NormTotal
No Reads
droRho1
AGAACCAACCCACTGGATGCTCCACGATTGTCGTCAACCAGAAGAATTGCGTGAGTAAAAC--C---------CT--------------------TGG----------------------------------------------------------------------------------------C-----------TTGGG-----------------------------------------------------------------A--------TATTTATAAATTAATTTTAATATTCAATTAT-------------TTGTGGACTTGC-GG--CGATAGCGCCTGTTGGGCCACACGGAGGATGCCCTGACGGAGACCCTCAACCATTACTACTTCGTGGTGGCCCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTGAAGGAGGAGCACTTCATGTCCTTGTGCTACGCASizeHit CountTotal NormTotal
No Reads
droBia1
AGAACCAGCCCACCGGCTGCTCCACGATCATTGTGAACCAGAAGAACTGCGTGAGTGTC-----------------------------------------------------------------------------------TGGGCTGCTAG---TAGTTTCCATACATTTTGAGCCAGACGTAAT-----------------GAAT----------------------------A--------------TTTCGGA----------AT---------------------------------------------------TC---------T--C--CGACAGCGCCTGCTGGGCCACACCGAGGACGCCCTGACGGAGACCCTGAACCACTACTACTTCGTGGTGGCCCACATCCTCAGCGACAAGCCGCAGGGCAAGTACAACGTGAAGGAGGAGCACTTCATGTCCCTCTGCTACGCCSizeHit CountTotal NormTotal
No Reads
droTak1
AAAACCAACCCACCGGCTGCTCCACGATCATTGTCAACCAGAAGAATTGCGTGAGTAGATTTTGAATTTTTA-------TAATATTTA------------TAATTAGTAATATTTTTTAATTTAATTTAATA-------------TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--T--TAATAGCGTCTCTTGGGCCACACCGAGGATGCCCTCACGGAGACCCTCAACCACTACTACTTCGTGGTGGCCCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTGAAGGAGGAGCACTTCATGTCCCTCTGCTACGCCSizeHit CountTotal NormTotal
No Reads
droEug1
AGAACCAACCCACCGGCTGTTCCACGATCATTGTCAACCAGAAGAATTGCGTAAGTTTTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATTTAAACTATA--------TATATATATATTT--------ATTTAACTAT-------------TC---------TT----GGTTAGCGCCTGCTGGGCCACACCGAGGATGCTCTGACGGAGACTCTCAACCATTACTATTTCGTGGTTGCCCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTCAAGGAGGAGCACTTTATGTCCTTGTGCTACGCCSizeHit CountTotal NormTotal
No Reads
dm3
AAAACCAACCAACCGGCTGCTCCACCATCATTGTTAACCAAAAGAATTGCGTGAGTGAA-----------------------------------------------------------------------------------TGGAATGGCTT------------------------------------------------------------TAATCTTGAATTGGTCAT-TAAATAACGTATC-TTATATC--T----------------------------------------------------------------------------------CAATAGCGCCTTTTGGGCCACACGGAGGATGCACTGACGGAGACCCTGAATCACTACTACTTCGTGGTGGCACACATCATCAGTGACAAGCCGCAGGGCAAGTACAACGTTAAGGAGGAGCACTTCATGTCCCTCTGCTACGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................GGCACACATCATCAGTGACA........................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................GTATC-TTATATC--T----------------------------------------------------------------------------------CAATAGCGC.......................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTACAACGTTAAGGAGGAGC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GGAGGATGCACTGACGGAGACCCATC...............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAACGTTAAGGAGGAGCACTTCA.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ACACGGAGGATGCACTGAC..........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................CCACACGGAGGATGCACTGACGGA.......................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................TATC-TTATATC--T----------------------------------------------------------------------------------CAATAGCGCCTTTTGG................................................................................................................................2811.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGGAGGAGCACTTCA.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAACGTTAAGGAGGA.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTGACAAGCCGCAGGG..............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTGACAAGCCGCAGGGCA............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GGCACACATCATCAGTGATG........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CTGACGGAGACCCTGAATCACTACT......................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGCAGGGCAAGTACA......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACTTCATGTCCCTCTGCTACGCT2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGCCGCAGGGCAAGT.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAACGTTAAGGAGGAGCAC.....................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
..................................................GTGAGTGAA-----------------------------------------------------------------------------------TGGAATGGCTT------------------------------------------------------------.............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................GACCCTGAATCACTACTACTTCG................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................T-TAAATAACGTATC-TTATATC--T----------------------------------------------------------------------------------CA..............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACGGAGGATGC................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAAGCCGCAGGGCG............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGAGTGAA-----------------------------------------------------------------------------------TGGAATGGCTT------------------------------------------------------------TAATCTT......................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................GATGCACTGACGGAGACCCTGAAG.............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GAATTGGTCAT-TAAATAACGTC...............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CACGGAGGATGCACTGACGGA.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ACACGGAGGATGCACTGACGGAGAC....................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTGGGCCACACGGAGGATGCC...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CGGAGGATGCACTGACGGAGAC....................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAAACCAACCCACCGGCTGTTCCACCATCATTGTTAACCAAAAGAATTGCGTGAGTGGA-----------------------------------------------------------------------------------TGGGATGGCAT------------------------------------------------------------TAATC-TGAATTGGTCAT-TAAATATCGCATC-TTATATC--TCA---------------------------------------------------------------------------------TTTAGCGCCTTTTGGGCCACACGGAGGATGCGCTGACGGAGACCCTGAATCACTACTACTTCGTGGTGGCGCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTCAAGGAGGAGCACTTCATGTCCCTCTGCTACGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................GTTCCACCATCATTGTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200000200000000000
............................................................................................................................................................................................................................................................................................................................................................................GGATGCGCTGACGGAGACCCTGAATCAC..........................................................................................2811.00100000000000001000
droSec2
AAAACCAACCCACCGGCTGCTCCACCATCATTGTTAACCAAAAGAATTGCGTAAGTGAA-----------------------------------------------------------------------------------TGTAATGGCAT------------------------------------------------------------TAATC-TGAATTGGTCAT-TAAATATCGTATC-TTATATC--TCA---------------------------------------------------------------------------------TTTAGCGCCTTTTGGGCCACACGGAGGATGCGCTGACGGAGACCCTGAATCACTACTACTTCGTGGTGGCGCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTCAAGGAGGAGCACTTCATGTCCCTCTGTTACGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTACAACGTCAAGGAGGA.........................2111.0010100
droYak3
AAAACCAACCCACCGGCTGTTCCACCATCATTGTCAACCAGAAGAATTGCGTGAGTGAT-----------------------------------------------------------------------------------TGCGTTTTGAT------------------------------------------------------------TGATT-GGAATCAGTTAT-TAAATAT------------------A-----------------------------TTT--------A------------------------------------TCTCGATAGCGCCTTTTGGGGCACACGGAGGATGCGCTGACGGAGACCCTGAATCACTACTACTTCGTGGTGGCCCACATCATCAGCGACAAGCCGCAGGGCAAGTACAACGTCAAGGAGGAGCACTTCATGTCCCTCTGCTACGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................GCACACGGAGGATGCGCTGACGGA.......................................................................................................2411.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGGGCAAGTACAACGTCAAGGAGG..........................2711.00101000000000
.........................CATCATTGTCAACCAGAAGAATTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTACAACGTCAAGGAGGA.........................1911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGACAAGCCGCAGGGCAAGT.........................................2211.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACGTCAAGGAGGAGCACTT...................2211.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................ATGCGCTGACGGAGACCCTGAA..............................................................................................2211.00100000010000
droEre2
AAAACCAACCCACCGGCTGCTCCACCATCATTGTCAACCAGAGGAATTGCGTGAGTGGA-----------------------------------------------------------------------------------TGCGATTTGAT------------------------------------------------------------CAATC-TGAATTGACTAT-TAAATG---------TACAAC--T----------------------------------------------------------------------------------CAATAGCGACTGTTGGGCCACACGGAGGATGCGCTCACGGAGACCCTGAACCACTACTACTTCGTGGTGGCCCACATCATCAGCGATAAGCCGCAGGGCAAGTACAACGTCAAGGAGGAGCACTTCATGTCCCTCTGCTACGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................TAAATG---------TACAAC--T----------------------------------------------------------------------------------CAATAG..........................................................................................................................................1911.0010000010
........................................................................................................................................................................................................................................................................................................................................................CGACTGTTGGGCCACACGGA......................................................................................................................2011.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGCACTTCATGTCCCTC.........2111.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAGCGATAAGCCGCAGGGCAAGTA........................................2811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................GAGGATGCGCTCACGGAGACCCT.................................................................................................2311.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTACAACGTCAAGGAGGA.........................2011.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................ACACGGAGGATGCGCTCACGGA.......................................................................................................2211.0010000100

Generated: 05/18/2015 at 03:46 AM