ID:

dps_2234

 Coordinate:

Unknown_group_764:24301-24451 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.8

Flybase annnotation

CDS [Dpse\GA23253-cds]; exon [dpse_GLEANR_11848:2]; intron [Dpse\GA23253-in]

Repeatable elements

NameClassFamilyStrand
SPOCK_DMiLINEJockey+
mature
  1. Unknown_group_429:5507-5532 -
  2. Unknown_singleton_2745:5110-5135 -
  3. Unknown_group_555:935-960 +
  4. dps_2234  Unknown_group_764:24382-24407 +
  5. Unknown_group_747:853-878 +
  6. Unknown_group_103:17763-17788 -
  7. Unknown_singleton_2748:1765-1790 +
  8. Unknown_singleton_775:1828-1853 +
star
  1. Unknown_singleton_2745:5146-5171 -
  2. Unknown_group_555:899-924 +
  3. dps_2234  Unknown_group_764:24346-24371 +
  4. Unknown_group_747:817-842 +
  5. Unknown_singleton_2748:1729-1754 +
  6. Unknown_singleton_2729:303-328 -
  7. Unknown_singleton_775:1787-1812 +
  8. Unknown_singleton_1729:15-40 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACGACCCGGAACCCCTGGAACTGGAAGAATTCCTGGCCTTCCTAAAAACCAGGAAAGCTACCAAGTGGGAAAAAACAATACATTTTTGAAATTATAAATAAAGTATGGCTGAGTGGCGTCATCCCTGAAGTCTGGCGCAGGATAAAAGTGGTACCCATCCCCAAGAAGAATGCAGACCCTAGTTCCTTCCAAAACCATAGGCCGATTTGTTTGATCAACACGCTGTTCAAATCCATAGAGGGGTTGATAA
***********************************************************************************************........((((.(((.....((((((...........))))))........))).))))..********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 SRR902010
ovaries
 M059
embryo
 SRR902011
testis
 V112
male body		 GSM343916
embryo
 GSM444067
head
...................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACCC.............................................................................................. 26 0 8 2.25 18 3 13 0 2 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACCCA............................................................................................. 27 0 8 2.13 17 3 10 1 1 2 0 0
..CGACCCGGAACCCCTGGAACTGG.................................................................................................................................................................................................................................. 23 0 13 1.92 25 24 1 0 0 0 0 0
.......................................................................................................................TCATCCCTGAAGTCTGGCGCAGGA............................................................................................................ 24 0 9 1.22 11 10 0 1 0 0 0 0
..CGACCCGGAACCCCTGGAACTG................................................................................................................................................................................................................................... 22 0 13 1.08 14 14 0 0 0 0 0 0
..CGACCCGGAACCCCTGGAACTGGA................................................................................................................................................................................................................................. 24 0 13 1.08 14 14 0 0 0 0 0 0
...............................................................................................TAAATAAAGTATGGCTGAGTGGCGTC.................................................................................................................................. 26 0 8 0.88 7 3 2 2 0 0 0 0
.....................................................................................................................................................TGGTACCCATCCCCAAGAAGAATGCA............................................................................ 26 0 7 0.86 6 4 2 0 0 0 0 0
........................................................................................................................CATCCCTGAAGTCTGGCGCAGG............................................................................................................. 22 0 9 0.78 7 7 0 0 0 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACC............................................................................................... 25 0 8 0.75 6 0 6 0 0 0 0 0
................................................................................................................................................AAAAGTGGTACCCATCCCCAAGAA................................................................................... 24 0 8 0.75 6 0 4 0 2 0 0 0
................................................................................................................................................AAAAGTGGTACCCATCCCCAAGAAGAA................................................................................ 27 0 7 0.71 5 0 5 0 0 0 0 0
.....................................................................................................................................................TGGTACCCATCCCCAAGAAGAATGC............................................................................. 25 0 7 0.71 5 2 1 0 2 0 0 0
...............................................................................................TAAATAAAGTATGGCTGAGTGGCGTCA................................................................................................................................. 27 0 7 0.71 5 3 1 0 1 0 0 0
...........................................................................................................................CCCTGAAGTCTGGCGCAGGATA.......................................................................................................... 22 0 10 0.70 7 7 0 0 0 0 0 0
...........................................................................................................................CCCTGAAGTCTGGCGCAGGATAA......................................................................................................... 23 0 10 0.70 7 7 0 0 0 0 0 0
........................................................................................................................CATCCCTGAAGTCTGGCGCAG.............................................................................................................. 21 0 9 0.67 6 6 0 0 0 0 0 0
........................................................................................................................CATCCCTGAAGTCTGGCGCAGGA............................................................................................................ 23 0 9 0.67 6 5 0 1 0 0 0 0
..CGACCCGGAACCCCTGGAACTGGAAG............................................................................................................................................................................................................................... 26 0 11 0.64 7 7 0 0 0 0 0 0
..........................................................................................................................................CAGGATAAAAGTGGTACCCATCCCC........................................................................................ 25 0 8 0.63 5 4 0 0 0 1 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGTGGTAC................................................................................................ 24 0 8 0.63 5 0 5 0 0 0 0 0
...........................................................................................................................CCCTGAAGTCTGGCGCAGGAT........................................................................................................... 21 0 10 0.60 6 6 0 0 0 0 0 0
.......................................................................................................................................................................................TTCCTTCCAAAACCATAGGCCGATT........................................... 25 0 5 0.60 3 3 0 0 0 0 0 0
................................................................................................................................................AAAAGTGGTACCCATCCCCAAGAAG.................................................................................. 25 0 7 0.57 4 0 4 0 0 0 0 0
..........................................................................................................................................CAGGATAAAAGTGGTACCCATCCC......................................................................................... 24 0 8 0.50 4 3 0 1 0 0 0 0
..CGACCCGGAACCCCTGGAACTGGAA................................................................................................................................................................................................................................ 25 0 12 0.50 6 4 2 0 0 0 0 0
..........................................................................................................................................CAGGATAAAAGTGGTACCCATC........................................................................................... 22 0 8 0.50 4 3 0 1 0 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGTGG................................................................................................... 21 0 10 0.50 5 0 5 0 0 0 0 0
........................................................................................................................................CGCAGGATAAAAGTGGTACC............................................................................................... 20 0 8 0.50 4 4 0 0 0 0 0 0
..................................................................................................................TGGCGTCATCCCTGAAGTCTGGCGC................................................................................................................ 25 0 8 0.50 4 3 0 1 0 0 0 0
.....................................................................................TTTGAAATTATAAATAAAGTATGGC............................................................................................................................................. 25 0 10 0.50 5 3 0 2 0 0 0 0
.ACGACCCGGAACCCCTGGAACTG................................................................................................................................................................................................................................... 23 0 13 0.46 6 6 0 0 0 0 0 0
.......................................................................................................................TCATCCCTGAAGTCTGGCGCAG.............................................................................................................. 22 0 9 0.44 4 3 0 0 0 1 0 0
.......................................................................................................................TCATCCCTGAAGTCTGGCGCAGG............................................................................................................. 23 0 9 0.44 4 4 0 0 0 0 0 0
.....................................................................................................................................................TGGTACCCATCCCCAAGAAGAATGCAG........................................................................... 27 0 7 0.43 3 1 2 0 0 0 0 0
..............................................................................................................................TGAAGTCTGGCGCAGGATAAAA....................................................................................................... 22 0 10 0.40 4 0 4 0 0 0 0 0
............................................................................................................................................................................................TCCAAAACCATAGGCCGATTTGTT....................................... 24 0 5 0.40 2 2 0 0 0 0 0 0
............................................................................................................................................................................................TCCAAAACCATAGGCCGATTTGTTTGAT................................... 28 0 5 0.40 2 1 0 0 0 1 0 0
............................................................................................................................................................................................TCCAAAACCATAGGCCGATTTGT........................................ 23 0 5 0.40 2 2 0 0 0 0 0 0
........................................................................................................................................................................................TCCTTCCAAAACCATAGGCCGATT........................................... 24 0 5 0.40 2 2 0 0 0 0 0 0
.............................................................................................TATAAATAAAGTATGGCTGAGTGGCGTC.................................................................................................................................. 28 0 8 0.38 3 1 0 2 0 0 0 0
................................................................................................................AGTGGCGTCATCCCTGAAGTCTGG................................................................................................................... 24 0 8 0.38 3 2 0 0 1 0 0 0
..............................................................................................................TGAGTGGCGTCATCCCTGAAGTCTG.................................................................................................................... 25 0 8 0.38 3 1 1 0 0 0 1 0
..........................................................................................................................................CAGGATAAAAGTGGTACCCATCCCCA....................................................................................... 26 0 8 0.38 3 3 0 0 0 0 0 0
...........................................................................................................................CCCTGAAGTCTGGCGCAGGATAAAAG...................................................................................................... 26 0 9 0.33 3 3 0 0 0 0 0 0
............................................................................................................................CCTGAAGTCTGGCGCAGGATAAAAG...................................................................................................... 25 0 9 0.33 3 3 0 0 0 0 0 0
................................................................................................................................................................................................................TGTTTGATCAACACGCTGTTCAAA................... 24 0 6 0.33 2 0 0 0 2 0 0 0
.......................................................................................................................................................................................TTCCTTCCAAAACCATAGGCC............................................... 21 0 6 0.33 2 2 0 0 0 0 0 0
...........................................................................................................................CCCTGAAGTCTGGCGCAGGA............................................................................................................ 20 0 10 0.30 3 3 0 0 0 0 0 0
............................................................................................................................CCTGAAGTCTGGCGCAGGATAA......................................................................................................... 22 0 10 0.30 3 3 0 0 0 0 0 0
..............................................................................................................................TGAAGTCTGGCGCAGGATAAAAG...................................................................................................... 23 0 10 0.30 3 3 0 0 0 0 0 0
....................................................................................................................................................GTGGTACCCATCCCCAAGAAGAATGC............................................................................. 26 0 7 0.29 2 1 0 0 0 1 0 0
.....................................................................................................................................................TGGTACCCATCCCCAAGAAGAATGCAGAC......................................................................... 29 0 7 0.29 2 2 0 0 0 0 0 0
............CCCCTGGAACTGGAAGAATTCCTGG...................................................................................................................................................................................................................... 25 0 14 0.29 4 4 0 0 0 0 0 0
..........................................................................................................................................CAGGATAAAAGTGGTACCCATCC.......................................................................................... 23 0 8 0.25 2 1 0 1 0 0 0 0
..................................................................................................................TGGCGTCATCCCTGAAGTCTGG................................................................................................................... 22 0 8 0.25 2 2 0 0 0 0 0 0
.......................................................................................................................................GCGCAGGATAAAAGTGGTACCC.............................................................................................. 22 0 8 0.25 2 2 0 0 0 0 0 0
.....................................................................................................................................TGGCGCAGGATAAAAGTGGTACCCA............................................................................................. 25 0 8 0.25 2 2 0 0 0 0 0 0
..........................................................................................................................................CAGGATAAAAGTGGTACCCAT............................................................................................ 21 0 8 0.25 2 2 0 0 0 0 0 0
...............................................................................................................................................TAAAAGTGGTACCCATCCCCAAGAA................................................................................... 25 0 8 0.25 2 0 2 0 0 0 0 0
..CGACCCGGAACCCCTGGAACT.................................................................................................................................................................................................................................... 21 0 13 0.23 3 3 0 0 0 0 0 0
.ACGACCCGGAACCCCTGGAACTGG.................................................................................................................................................................................................................................. 24 0 13 0.23 3 3 0 0 0 0 0 0
.....................................................................................TTTGAAATTATAAATAAAGTATGGCT............................................................................................................................................ 26 0 9 0.22 2 2 0 0 0 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGTGGTA................................................................................................. 23 0 9 0.22 2 1 1 0 0 0 0 0
.......................................................................................................................TCATCCCTGAAGTCTGGCGCA............................................................................................................... 21 0 9 0.22 2 2 0 0 0 0 0 0
..............................................................................................................TGAGTGGCGTCATCCCTG........................................................................................................................... 18 0 9 0.22 2 0 2 0 0 0 0 0
................TGGAACTGGAAGAATTCCTGGAAA................................................................................................................................................................................................................... 24 3 14 0.21 3 0 3 0 0 0 0 0
...................AACTGGAAGAATTCCTGGCCTT.................................................................................................................................................................................................................. 22 0 14 0.21 3 3 0 0 0 0 0 0
...............................................................................................................................GAAGTCTGGCGCAGGATAAAAGTGG................................................................................................... 25 0 10 0.20 2 2 0 0 0 0 0 0
........................................................................................................................................................................................TCCTTCCAAAACCATAGGCCGATTTG......................................... 26 0 5 0.20 1 1 0 0 0 0 0 0
.......................................................................................................................................................................................TTCCTTCCAAAACCATAGGCCGATTTGTT....................................... 29 0 5 0.20 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................CCTTCCAAAACCATAGGCCGATT........................................... 23 0 5 0.20 1 1 0 0 0 0 0 0
............................................................................................................................................................................................TCCAAAACCATAGGCCGATTTGTTTGAA................................... 28 1 5 0.20 1 1 0 0 0 0 0 0
............................................................................................................................................................................................TCCAAAACCATAGGCCGATTTG......................................... 22 0 5 0.20 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................CCTTCCAAAACCATAGGCCGATTTG......................................... 25 0 5 0.20 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGTTTGATCAACACGCTGTTCA..................... 23 0 5 0.20 1 0 0 0 1 0 0 0
............................................................................................................................................................................................TCCAAAACCATAGGCCGATTTGTTTG..................................... 26 0 5 0.20 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................CCAAAACCATAGGCCGATTTGTTTGA.................................... 26 0 5 0.20 1 1 0 0 0 0 0 0
...............................................................................................TAAATAAAGTATGGCTGAG......................................................................................................................................... 19 0 11 0.18 2 0 2 0 0 0 0 0
...............................................................................................TAAATAAAGTATGGCTGAGTGG...................................................................................................................................... 22 0 11 0.18 2 1 0 0 0 1 0 0
.............................................................................................TATAAATAAAGTATGGCTGAGTGG...................................................................................................................................... 24 0 11 0.18 2 2 0 0 0 0 0 0
..CGACCCGGAACCCCTGGAACTGGAAGAA............................................................................................................................................................................................................................. 28 0 11 0.18 2 2 0 0 0 0 0 0
.ACGACCCGGAACCCCTGGAACTGGAA................................................................................................................................................................................................................................ 26 0 12 0.17 2 2 0 0 0 0 0 0
.................................................................................................................................................................................................AACCATAGGCCGATTTGTTTGAT................................... 23 0 6 0.17 1 1 0 0 0 0 0 0
..............................................................................................................................................................................................CAAAACCATAGGCCGATTTGTTTG..................................... 24 0 6 0.17 1 1 0 0 0 0 0 0
..CGACCCGGAACCCCTGGAAC..................................................................................................................................................................................................................................... 20 0 13 0.15 2 1 0 1 0 0 0 0
...GACCCGGAACCCCTGGAACT.................................................................................................................................................................................................................................... 20 0 13 0.15 2 2 0 0 0 0 0 0
................................................................................................................................................AAAAGTGGTACCCATCCCCACGAAGAA................................................................................ 27 1 7 0.14 1 0 1 0 0 0 0 0
........................................................................................................................................................TACCCATCCTCAAGAAGAATGCAGACCC....................................................................... 28 1 7 0.14 1 1 0 0 0 0 0 0
....................................................................................................................................................GTGGTACCCATCCCCAAGAAGAA................................................................................ 23 0 7 0.14 1 0 1 0 0 0 0 0
........................................................................................................................................................TACCCATCCCCAAGAAGAATGCAGAC......................................................................... 26 0 7 0.14 1 1 0 0 0 0 0 0
...............................................................................................TAAATAAAGTATGGCTGAGGGGCGTCA................................................................................................................................. 27 1 7 0.14 1 0 1 0 0 0 0 0
..........AACCCCTGGAACTGGAAGAATTC.......................................................................................................................................................................................................................... 23 0 14 0.14 2 2 0 0 0 0 0 0
..............................................................................................................TGAGTGGCGTCATCTCTGAAGTCTGGC.................................................................................................................. 27 1 7 0.14 1 0 0 0 1 0 0 0
.................GGAACTGGAAGAATTCCTGGCCTTC................................................................................................................................................................................................................. 25 0 14 0.14 2 2 0 0 0 0 0 0
.........................................................................................................................................................ACCCATCCCCAAGAAGAATGCAGAC......................................................................... 25 0 7 0.14 1 1 0 0 0 0 0 0
.............CCCTGGAACTGGAAGAATTCCTGG...................................................................................................................................................................................................................... 24 0 14 0.14 2 2 0 0 0 0 0 0
................TGGAACTGGAAGAATTCCTGGCC.................................................................................................................................................................................................................... 23 0 14 0.14 2 1 1 0 0 0 0 0
.........................................................................................................................................................ACCCATCCCCAAGAAGAATGCAGACCC....................................................................... 27 0 7 0.14 1 1 0 0 0 0 0 0
........................................................................................................................................................TACCCATCCCCAAGAAGAATGCAGACCC....................................................................... 28 0 7 0.14 1 0 0 0 0 1 0 0
....................................................................................................................................................GTGGTACCCATCCCCAAGAAGAATGCA............................................................................ 27 0 7 0.14 1 1 0 0 0 0 0 0
.....................................................................................................................................................TGGTACCCATCCCCAAGAAGAATGCAGA.......................................................................... 28 0 7 0.14 1 1 0 0 0 0 0 0
.......................................................................................................................................................GTACCCATCCCCAAGAAGAATGCAGACCC....................................................................... 29 0 7 0.14 1 1 0 0 0 0 0 0
................TGGAACTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................... 24 0 14 0.14 2 1 0 1 0 0 0 0
.........................................................................................................ATGGCTGAGTGGCGTCATCCCTGAAG........................................................................................................................ 26 0 7 0.14 1 1 0 0 0 0 0 0
.......CGGAACCCCTGGAACTGGAAGAATTC.......................................................................................................................................................................................................................... 26 0 14 0.14 2 1 0 0 0 1 0 0
........................................................................................................TATGGCTGAGTGGCGTCATCTCTGA.......................................................................................................................... 25 1 7 0.14 1 0 0 0 1 0 0 0
................TGGAACTGGAAGAATTCCTGGC..................................................................................................................................................................................................................... 22 0 14 0.14 2 2 0 0 0 0 0 0
......................................................................................................................................................GGTACCCATCCCCAAGAAGAATGC............................................................................. 24 0 7 0.14 1 1 0 0 0 0 0 0
.....................CTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................... 19 0 14 0.14 2 2 0 0 0 0 0 0
...........................................................................................................................................................CCATCCCCAAGAAGAATGCAGACC........................................................................ 24 0 8 0.13 1 0 0 0 0 0 1 0
..............................................................................................................TGAGTGGCGTCATCCCTGAAGTCT..................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0
..................................................................................................................................GTCTGGCGCAGGATAAAAGTGGTAC................................................................................................ 25 0 8 0.13 1 1 0 0 0 0 0 0
....................................................................................................................................CTGGCGCAGGATAAAAGTGGTACC............................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0 0
.............................................................................................TATAAATAAAGTATGGCTGAGGGGCGT................................................................................................................................... 27 1 8 0.13 1 0 1 0 0 0 0 0
..................................................................................................................TGGCGTCATCCCTGAAGTCTGGC.................................................................................................................. 23 0 8 0.13 1 1 0 0 0 0 0 0
..................................................................................................................TGGCGTCATCCCCGAAGTCTGGC.................................................................................................................. 23 1 8 0.13 1 0 0 0 0 1 0 0
..................................................................................................................TGGCGTCATCCCTGAAGTCTGGCG................................................................................................................. 24 0 8 0.13 1 1 0 0 0 0 0 0
................................................................................................................................................................CCCAAGAAGAATGCAGACCCTAAAA.................................................................. 25 3 8 0.13 1 1 0 0 0 0 0 0
.......................................................................................................................................GCGCAGGATAAGAGTGGTAC................................................................................................ 20 1 8 0.13 1 0 0 0 0 0 1 0
..............................................................................................................................................................TCCCCAAGAAGAATGCAGACCCT...................................................................... 23 0 8 0.13 1 0 0 1 0 0 0 0
..............................................................................................................TGAGTGGCGTCATCCCTGAAGTCAA.................................................................................................................... 25 2 8 0.13 1 1 0 0 0 0 0 0
..........................................................................................................................................CAGGATAAAAGTGGTACCCATA........................................................................................... 22 1 8 0.13 1 1 0 0 0 0 0 0
..............................................................................................................TGAGTGGCGTCATCCCTGAAGTC...................................................................................................................... 23 0 8 0.13 1 0 0 1 0 0 0 0
........................................................................................................................................CGCAGGATAAAAGTGGTACCCATCCCCA....................................................................................... 28 0 8 0.13 1 1 0 0 0 0 0 0
............................................................................................................................................................CATCCCCAAGAAGAATGC............................................................................. 18 0 8 0.13 1 1 0 0 0 0 0 0
..........................................................................................................................................................CCCATCCCCAAGAAGAATGCAGACCC....................................................................... 26 0 8 0.13 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................CACGCTGTTCAAATCCATAGAG.......... 22 0 8 0.13 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TTATTTGATCAACGCACTGTT....................... 21 3 8 0.13 1 0 0 1 0 0 0 0
..................................................................................................................TGGCGTCATCCCTGAAGTCTGGCGCAGG............................................................................................................. 28 0 8 0.13 1 0 0 0 0 1 0 0
.....................................................................................................................................TGGCGCAGGATAAAAGTGGTACC............................................................................................... 23 0 8 0.13 1 0 0 0 0 1 0 0
..................................................................................................................TTGTGTCATCCCTGAAGTCTGGCGCAGG............................................................................................................. 28 2 8 0.13 1 0 0 1 0 0 0 0
..............................................................................................................TGAGTGGCGTCATCCCTGAAGT....................................................................................................................... 22 0 8 0.13 1 1 0 0 0 0 0 0
.....................................................................................................................................TTGCGCAGGATAAAAGTGGTACCA.............................................................................................. 24 2 8 0.13 1 0 0 1 0 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACCCGAG........................................................................................... 29 3 8 0.13 1 0 1 0 0 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGAGGTACCCA............................................................................................. 27 1 8 0.13 1 0 0 0 1 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACCCAT............................................................................................ 28 0 8 0.13 1 0 1 0 0 0 0 0
..............................................................................................................TTAGTGGCGTCATCCCTGAAGTC...................................................................................................................... 23 1 8 0.13 1 0 0 1 0 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGGGGTAC................................................................................................ 24 1 8 0.13 1 0 0 0 1 0 0 0
...................................................................................................................................CCTGGCGCAGGATAAAAGTGGTACCCA............................................................................................. 27 1 8 0.13 1 1 0 0 0 0 0 0
...........................................................................................................................................AGGATAAAAGTGGTACCCATC........................................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0
..................................................................................................................TGGCGTCATCCCTGAGGTCTGGC.................................................................................................................. 23 1 8 0.13 1 1 0 0 0 0 0 0
.........................................................................................................................................GCAGGATAAAAGTGGTACCCATCCC......................................................................................... 25 0 8 0.13 1 1 0 0 0 0 0 0
...............................................................................................................................................TAAAAGTGGTACCCATTCCCAAGAA................................................................................... 25 1 8 0.13 1 0 1 0 0 0 0 0
..............................................................................................................................................................TCCCCAAGAAGAATGCAGACCC....................................................................... 22 0 8 0.13 1 1 0 0 0 0 0 0
...........................................................................................................................................................CCATCCCCAAGAAGAATGCAGACCCT...................................................................... 26 0 8 0.13 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................AACACGCTGTTCAAATCCATA............. 21 0 8 0.13 1 0 1 0 0 0 0 0
...............................................AACGAGGAAAGCTAGCAATTGGG..................................................................................................................................................................................... 23 3 8 0.13 1 0 0 0 0 0 1 0
...............................................................................................................................................TAAAAGTGGTACCCATCCCCAAGAAA.................................................................................. 26 1 8 0.13 1 0 0 1 0 0 0 0
....................................................................................................................................CTGGCGCAGGATAAAAGTGGTACCCA............................................................................................. 26 0 8 0.13 1 1 0 0 0 0 0 0
..............................................................................................................TGAGTGGCGTCATCCCTGAAGTCA..................................................................................................................... 24 1 8 0.13 1 1 0 0 0 0 0 0
..................................................................................................................TGGCGTCATCCCTGAAGTCTGGCGCA............................................................................................................... 26 0 8 0.13 1 1 0 0 0 0 0 0
........................................................................................................................CATCCCCGAAGTCTGGCGCAGGA............................................................................................................ 23 1 9 0.11 1 1 0 0 0 0 0 0
.....................................................................................................................................TGGCGCAGGATAAAAGTGGTAA................................................................................................ 22 1 9 0.11 1 1 0 0 0 0 0 0
........................................................................................................................CATCCCTGAAGTCTGGCGCAGGATA.......................................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0
................................................................................................................AGTGGCGTCATCCCTGAAGTCTG.................................................................................................................... 23 0 9 0.11 1 1 0 0 0 0 0 0
....................................................................................................................................CTGGCGCAGGATAAAAGTGGTA................................................................................................. 22 0 9 0.11 1 1 0 0 0 0 0 0
.......................................................................................TTAATTTATAAATAAAGTATGGCT............................................................................................................................................ 24 2 9 0.11 1 0 0 1 0 0 0 0
.....................................................................................................................CGTCATCCCTGAAGTCTGGCGCAG.............................................................................................................. 24 0 9 0.11 1 1 0 0 0 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGTGGT.................................................................................................. 22 0 9 0.11 1 1 0 0 0 0 0 0
........................................................................................................................CATCCCTGAAGTCTGGCGCAGGAT........................................................................................................... 24 0 9 0.11 1 0 0 1 0 0 0 0
.......................................................................................................................TCATCCCTGAAGTCTGGCGCAGGAT........................................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0
.................................................................................................................GTGGCGTCATCCCTGAAGTCT..................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0 0 0
...................................................................................................................GGCGTCATCCCTGAAGTCTGGCGT................................................................................................................ 24 1 9 0.11 1 1 0 0 0 0 0 0
........................................................................................................TATGGCTGAGTGGCGTCATAAA............................................................................................................................. 22 3 9 0.11 1 1 0 0 0 0 0 0
............................................................................................................................CCTGAAGTCTGGCGCAGGATAAAAGTG.................................................................................................... 27 0 9 0.11 1 1 0 0 0 0 0 0
.............................................................................................................................CTGAAGTCTGGCGCAGGATAAAAGTG.................................................................................................... 26 0 9 0.11 1 0 0 0 0 1 0 0
...............................................................................................................GAGTGGCGTCATCCCTGAAGTC...................................................................................................................... 22 0 9 0.11 1 1 0 0 0 0 0 0
.............................................................................................................................CTGAAGTTTGGCGCAGGATAAAAG...................................................................................................... 24 1 9 0.11 1 0 0 0 0 1 0 0
........................................................................................GAAATTATAAATAAAGTATGGCTGAGA........................................................................................................................................ 27 1 9 0.11 1 1 0 0 0 0 0 0
..........................................................................................................................TCCCTGAAGTCTGGCGCAAGATAAAAG...................................................................................................... 27 1 9 0.11 1 1 0 0 0 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGT..................................................................................................... 19 0 10 0.10 1 0 1 0 0 0 0 0
...........................................................................................................................CCCTGAAGTCTGGCGCAGGAA........................................................................................................... 21 1 10 0.10 1 1 0 0 0 0 0 0
.....................................................................................TTTGAAATTATAAATAAAGTATGG.............................................................................................................................................. 24 0 10 0.10 1 1 0 0 0 0 0 0
............................................................................................................................CCTGAAGTCTGGCGCAGGAT........................................................................................................... 20 0 10 0.10 1 1 0 0 0 0 0 0
...................................................................................................................................TCTGGCGCAGGATAAAAGTG.................................................................................................... 20 0 10 0.10 1 1 0 0 0 0 0 0
..........................................................................................................................TCCCTGAAGTCTGGCGCAGGATA.......................................................................................................... 23 0 10 0.10 1 1 0 0 0 0 0 0
.....................................................................................TTTGAAATTATAAATAAAGTATAG.............................................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0 0
..........................................................................................................................TCCCTGAAGTCTGGCGCAG.............................................................................................................. 19 0 10 0.10 1 1 0 0 0 0 0 0
.............................................................................................................................CTGAAGTCTGGCGCAGGATAAA........................................................................................................ 22 0 10 0.10 1 1 0 0 0 0 0 0
..............................................................................................................................TGAAGTCTGGCGCAGGATAAAAGTGG................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0 0
............................................................................................................................CCTGAAGTCTGGCGCAGGT............................................................................................................ 19 1 10 0.10 1 1 0 0 0 0 0 0
........................................................................................GAAATTATAAATAAAGTATGGC............................................................................................................................................. 22 0 10 0.10 1 0 0 1 0 0 0 0
................................................................................................................................AAGTCTGGCGCAGGATAAAAGT..................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0
.......................................................................................TGAAATTATAAATAAAGTATGGC............................................................................................................................................. 23 0 10 0.10 1 1 0 0 0 0 0 0
..................................................................................................................................CTATGGCGCAGGATAATAGTGG................................................................................................... 22 3 10 0.10 1 1 0 0 0 0 0 0
.............................................................................................................................CTGAAGTCTGGCGCAGGAT........................................................................................................... 19 0 10 0.10 1 1 0 0 0 0 0 0
...........................................................................................................................CCCTGAAGTCTGGCGCAGGATAAA........................................................................................................ 24 0 10 0.10 1 0 0 0 0 0 1 0
..........................................................................................................................TCCCTGAAGTCTGGCGCA............................................................................................................... 18 0 10 0.10 1 1 0 0 0 0 0 0
...........................................................................................................................CCCTGAAGTCTGGCGCAGGAC........................................................................................................... 21 1 10 0.10 1 1 0 0 0 0 0 0
...............................................................................................TGAATAAAGTATGGCTGAGTGG...................................................................................................................................... 22 1 11 0.09 1 1 0 0 0 0 0 0
...GACCCGGAACCCCTGGAACTGGAAGA.............................................................................................................................................................................................................................. 26 0 11 0.09 1 1 0 0 0 0 0 0
..........................................................................................AATTATAAATAAAGTATGGCTA........................................................................................................................................... 22 1 11 0.09 1 0 0 0 0 0 1 0
.....CCCGGAACCCCTGGAACTGGAAGAAT............................................................................................................................................................................................................................ 26 0 11 0.09 1 1 0 0 0 0 0 0
................................................................................................AAATAAAGTATGGCTGAGTGGC..................................................................................................................................... 22 0 11 0.09 1 0 0 0 0 1 0 0
.............................................................................................TATAAATAAAGTATGGCTGAGTGGC..................................................................................................................................... 25 0 11 0.09 1 1 0 0 0 0 0 0
................................................................................................AAATAAAGTATGGCTGAGTGG...................................................................................................................................... 21 0 11 0.09 1 1 0 0 0 0 0 0
.............................................................................................TATAAATAAAGTATGGCTGAGTTG...................................................................................................................................... 24 1 11 0.09 1 0 0 0 0 0 1 0
...................................................................................................TAAAGTATGGCTGAGTGG...................................................................................................................................... 18 0 11 0.09 1 1 0 0 0 0 0 0
.............................................................................................TATAAATAAAGTATGGCTGAGTGGCGC................................................................................................................................... 27 1 11 0.09 1 1 0 0 0 0 0 0
...GACCCGGAACCCCTGGAACTGGAAG............................................................................................................................................................................................................................... 25 0 11 0.09 1 1 0 0 0 0 0 0
...............................................................................................TAAATAAAGTATGGCTGAGTGGCG.................................................................................................................................... 24 0 11 0.09 1 1 0 0 0 0 0 0
.....CCCGGAACCCCTGGAACTGGAAGA.............................................................................................................................................................................................................................. 24 0 11 0.09 1 1 0 0 0 0 0 0
...GACCCGGAACCCCTGGAACTGGAA................................................................................................................................................................................................................................ 24 0 12 0.08 1 1 0 0 0 0 0 0
............................................................................................TTATAAATAAAGTATGGC............................................................................................................................................. 18 0 12 0.08 1 1 0 0 0 0 0 0
............................................................................................TTATAAATAAGGTATGGCTGAGTG....................................................................................................................................... 24 1 12 0.08 1 1 0 0 0 0 0 0
.............................................................................................TATAAATAAGGTATGGCTGAGTGGC..................................................................................................................................... 25 1 12 0.08 1 1 0 0 0 0 0 0
...............................................................................................TAAATAAGGTATGGCTGAGTGGCG.................................................................................................................................... 24 1 12 0.08 1 1 0 0 0 0 0 0
..........................................................CTACCAAGTGGGAAAAAACA............................................................................................................................................................................. 20 0 12 0.08 1 1 0 0 0 0 0 0
.............................................................................................TATAAATAAGGTATGGCTGAGTGG...................................................................................................................................... 24 1 12 0.08 1 1 0 0 0 0 0 0
............................................................................................TTATAAATAAGGTATGGCTGAGT........................................................................................................................................ 23 1 12 0.08 1 0 0 0 0 1 0 0
..CGACCCGGAACCCCTGGAA...................................................................................................................................................................................................................................... 19 0 13 0.08 1 1 0 0 0 0 0 0
.ACGACCCGGAACCCCTGGAA...................................................................................................................................................................................................................................... 20 0 13 0.08 1 1 0 0 0 0 0 0
...GACCCGGAACCCCTGGAACTG................................................................................................................................................................................................................................... 21 0 13 0.08 1 1 0 0 0 0 0 0
.CCGACCCGGAACCCCTGGAACTGG.................................................................................................................................................................................................................................. 24 1 13 0.08 1 1 0 0 0 0 0 0
..CGACCCGGAACCCCTAGAACTG................................................................................................................................................................................................................................... 22 1 13 0.08 1 1 0 0 0 0 0 0
.ACGACCCGGAACCCCTGGAACT.................................................................................................................................................................................................................................... 22 0 13 0.08 1 1 0 0 0 0 0 0
................TGGAACTGGAAGAATTTCTG....................................................................................................................................................................................................................... 20 1 14 0.07 1 1 0 0 0 0 0 0
..............................................................................................................................................ATTCACGTGGTACCCATCCC......................................................................................... 20 3 14 0.07 1 1 0 0 0 0 0 0
.........GAACCCCTGGAACTGGAAGAGTTCC......................................................................................................................................................................................................................... 25 1 14 0.07 1 0 0 0 0 0 1 0
...............CTGGAACTGGAAGAATTCCTGGC..................................................................................................................................................................................................................... 23 0 14 0.07 1 1 0 0 0 0 0 0
..........AACCCCTGGAACTGGAAGAATTCCTGGC..................................................................................................................................................................................................................... 28 0 14 0.07 1 1 0 0 0 0 0 0
.........GAACCCCTGGAACTGGAAGAA............................................................................................................................................................................................................................. 21 0 14 0.07 1 1 0 0 0 0 0 0
...........ACCCCTGGAACTGGAAGAATTCCT........................................................................................................................................................................................................................ 24 0 14 0.07 1 1 0 0 0 0 0 0
.....................CTGGAAGAGTTCCTGGCCTT.................................................................................................................................................................................................................. 20 1 14 0.07 1 1 0 0 0 0 0 0
.................GGAACTGGAAGAATTCATGGC..................................................................................................................................................................................................................... 21 1 14 0.07 1 0 0 0 1 0 0 0
...............CTGGAACTGGAAGAATTCCTG....................................................................................................................................................................................................................... 21 0 14 0.07 1 1 0 0 0 0 0 0
...............CTGGAACTGGAAGAATTCCTGGCCTT.................................................................................................................................................................................................................. 26 0 14 0.07 1 1 0 0 0 0 0 0
................TGGAACTGGAAGAATTCATGGCCTTC................................................................................................................................................................................................................. 26 1 14 0.07 1 1 0 0 0 0 0 0
....................ACTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................... 20 0 14 0.07 1 1 0 0 0 0 0 0
.................GGAACTGGAAGAATTCCTGGC..................................................................................................................................................................................................................... 21 0 14 0.07 1 0 0 0 1 0 0 0
..........AACCCCTGGAACTGGAAGAATTCC......................................................................................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0 0 0
....................ACTGGAAGAATTCCTGGCCTTCCT............................................................................................................................................................................................................... 24 0 14 0.07 1 1 0 0 0 0 0 0
..CGACCCGGAACCACTGGA....................................................................................................................................................................................................................................... 18 1 14 0.07 1 0 0 1 0 0 0 0
......................TGGAAGAATTCCTGGCCTTCCTAA............................................................................................................................................................................................................. 24 0 14 0.07 1 0 0 1 0 0 0 0
...........ACCCCTGGAACTGGAAGAATTCC......................................................................................................................................................................................................................... 23 0 14 0.07 1 1 0 0 0 0 0 0
...................AACTGGAAGAATTCCTGGC..................................................................................................................................................................................................................... 19 0 14 0.07 1 1 0 0 0 0 0 0
..................GAACTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................... 22 0 14 0.07 1 1 0 0 0 0 0 0
...............CTGGAACTGGAAGAATTCCTGGCCTTC................................................................................................................................................................................................................. 27 0 14 0.07 1 1 0 0 0 0 0 0
................TGGAACTGGAAGAATTCCTGGCCTTCC................................................................................................................................................................................................................ 27 0 14 0.07 1 1 0 0 0 0 0 0
........GGAACCCCTGGAACTGGAAGAATTCC......................................................................................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0 0 0
................TGGAACTGGAAGAATTCCTGGCCTTC................................................................................................................................................................................................................. 26 0 14 0.07 1 0 1 0 0 0 0 0
.............CCCTGGAACTGGAAGAATTCCTG....................................................................................................................................................................................................................... 23 0 14 0.07 1 1 0 0 0 0 0 0
.............CCCTGGAACTGGAAGAATTCCTGGCC.................................................................................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0 0 0 0
...............CTGGAACTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................... 25 0 14 0.07 1 0 1 0 0 0 0 0
................TGGAACTGGAAGAATTCCTGG...................................................................................................................................................................................................................... 21 0 14 0.07 1 1 0 0 0 0 0 0
................TTGAACTGGAAGAATTCCTGGCC.................................................................................................................................................................................................................... 23 1 14 0.07 1 0 0 1 0 0 0 0
.................GGAACTGGAAGAATTCCTGGCC.................................................................................................................................................................................................................... 22 0 14 0.07 1 1 0 0 0 0 0 0
.....................CTGGAAGAATTCCTGGCCTTCC................................................................................................................................................................................................................ 22 0 14 0.07 1 1 0 0 0 0 0 0
....................ACTGGAAGAATTCCTGGCCTT.................................................................................................................................................................................................................. 21 0 14 0.07 1 1 0 0 0 0 0 0
....................................................................................TTTTGAAATTATTAATAAAGA.................................................................................................................................................. 21 2 16 0.06 1 1 0 0 0 0 0 0
..............ACTGGCACTGGAAGAATTCC......................................................................................................................................................................................................................... 20 2 16 0.06 1 0 0 0 0 1 0 0
.........................................................GCTACCGAGAGGGAAAAAA............................................................................................................................................................................... 19 2 17 0.06 1 1 0 0 0 0 0 0
..............CATGGCACTGGAAGAACTCCTG....................................................................................................................................................................................................................... 22 3 18 0.06 1 0 0 0 0 0 0 1
........................................................................ATAACAATCCATTTTTGAATT.............................................................................................................................................................. 21 3 18 0.06 1 1 0 0 0 0 0 0
..............CCAGGAACTCGAAGAATTC.......................................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

CTGCTGGGCCTTGGGGACCTTGACCTTCTTAAGGACCGGAAGGATTTTTGGTCCTTTCGATGGTTCACCCTTTTTTGTTATGTAAAAACTTTAATATTTATTTCATACCGACTCACCGCAGTAGGGACTTCAGACCGCGTCCTATTTTCACCATGGGTAGGGGTTCTTCTTACGTCTGGGATCAAGGAAGGTTTTGGTATCCGGCTAAACAAACTAGTTGTGCGACAAGTTTAGGTATCTCCCCAACTATT
**********************************************************************************************........((((.(((.....((((((...........))))))........))).))))..*********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M040
female body
 V112
male body		 M059
embryo
 GSM343916
embryo
 M062
head
 GSM444067
head
 SRR902010
ovaries
 M022
male body		 SRR902011
testis
..........................................................................................................ACCGACTCACCGCAGTAGGGACTTCAG...................................................................................................................... 27 0 6 13.00 78 66 7 2 0 1 2 0 0 0
..............................................................................................................................................................AGGGGTTCTTCTTACGTCTGGGAT..................................................................... 24 0 8 11.88 95 76 17 0 0 0 1 0 0 1
................................................................................................................................................................................................TTTGGTATCCGGCTAAACAAACT.................................... 23 0 6 10.17 61 60 0 1 0 0 0 0 0 0
............................................................................................................CGACTCACCGCAGTAGGGACTTCAG...................................................................................................................... 25 0 7 9.14 64 62 0 0 2 0 0 0 0 0
.................................................................................................................................................................................................TTGGTATCCGGCTAAACAAACT.................................... 22 0 6 7.50 45 39 0 6 0 0 0 0 0 0
.............................................................................................................................................................................................GGTTTTGGTATCCGGCTAAACAAACT.................................... 26 0 5 5.60 28 25 0 2 1 0 0 0 0 0
.............................................................................................................GACTCACCGCAGTAGGGACTTCAG...................................................................................................................... 24 0 8 5.00 40 36 4 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CAAGTTTAGGTATCTCCCCAACTATT 26 0 8 4.88 39 31 0 6 2 0 0 0 0 0
...............................................................................................................................................................................................................................GACAAGTTTAGGTATCTCCCCAACTATT 28 0 8 4.63 37 36 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................GTTTTGGTATCCGGCTAAACAAACT.................................... 25 0 6 4.50 27 27 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGGGTTCTTCTTACGTCTGGGAT..................................................................... 23 0 8 4.50 36 27 6 2 0 0 1 0 0 0
.................................................................................................................................TCAGACCGCGTCCTATTTTCACCAT................................................................................................. 25 0 9 2.78 25 23 0 0 2 0 0 0 0 0
..........................................................................................................................AGGGACTTCAGACCGCGTCCTATTTT....................................................................................................... 26 0 9 2.67 24 22 0 0 0 0 0 2 0 0
..............................................................................................................................................................................................................................CGACAAGTTTAGGTATCTCCCCAACTATT 29 0 8 2.63 21 20 0 0 1 0 0 0 0 0
.................................................................................................................................................................GGTTCTTCTTACGTCTGGGAT..................................................................... 21 0 8 2.50 20 19 0 0 1 0 0 0 0 0
...........................................................................................................CCGACTCACCGCAGTAGGGACTTCAG...................................................................................................................... 26 0 7 2.29 16 13 0 0 0 3 0 0 0 0
............................................................................................................................................................................................AGGTTTTGGTATCCGGCTAAACAAACT.................................... 27 0 5 2.20 11 11 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AGTTTAGGTATCTCCCCAACTATT 24 0 8 1.88 15 14 0 1 0 0 0 0 0 0
................................................................................................................................................................GGGTTCTTCTTACGTCTGGGAT..................................................................... 22 0 8 1.88 15 12 2 0 1 0 0 0 0 0
..................................................................................................................................................................................................TGGTATCCGGCTAAACAAACT.................................... 21 0 6 1.83 11 9 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................TTTTGGTATCCGGCTAAACAAACT.................................... 24 0 6 1.67 10 10 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................GTTTAGGTATCTCCCCAACTATT 23 0 8 1.63 13 13 0 0 0 0 0 0 0 0
..........................................................................................................ACCGACTCACCGCAGTAGGGACTT......................................................................................................................... 24 0 7 1.57 11 11 0 0 0 0 0 0 0 0
............................................................................................................................GGACTTCAGACCGCGTCCTATTTT....................................................................................................... 24 0 9 1.56 14 13 0 1 0 0 0 0 0 0
..........................................................................................................................................................GGGTAGGGGTTCTTCTTACGT............................................................................ 21 0 8 1.38 11 11 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GACAAGTTTAGGTATCTCCCCAACTAT. 27 0 8 1.38 11 11 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTTGGTATCCGGCTAAACAAAC..................................... 22 0 6 1.33 8 8 0 0 0 0 0 0 0 0
............................................................................................................CGACTCACCGCAGTAGGGACTTCA....................................................................................................................... 24 0 7 1.29 9 9 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................AAGGTTTTGGTATCCGGCTAAACAAACT.................................... 28 0 5 1.20 6 6 0 0 0 0 0 0 0 0
..........................................................................................................ACCGACTCACCGCAGTAGGGACTTCA....................................................................................................................... 26 0 6 1.17 7 7 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ACAAGTTTAGGTATCTCCCCAACTATT 27 0 8 1.13 9 8 0 1 0 0 0 0 0 0
......................................................................................................................................CCGCGTCCTATTTTCACCATGGGT............................................................................................. 24 0 8 1.00 8 6 0 2 0 0 0 0 0 0
..............................................................................................................ACTCACCGCAGTAGGGACTTCAG...................................................................................................................... 23 0 8 1.00 8 5 2 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................CGACAAGTTTAGGTATCTCCCCAACTAT. 28 0 8 1.00 8 8 0 0 0 0 0 0 0 0
..........................................................................................................ACCGACTCACCGCAGTAGGGACT.......................................................................................................................... 23 0 7 1.00 7 5 1 0 1 0 0 0 0 0
...........................................................................................................................................................GGTAGGGGTTCTTCTTACGT............................................................................ 20 0 8 0.88 7 7 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GGTTTTGGTATCCGGCTAAACAAAC..................................... 25 0 5 0.80 4 4 0 0 0 0 0 0 0 0
................................................................................................................TCACCGCAGTAGGGACTTCAG...................................................................................................................... 21 0 9 0.78 7 3 3 1 0 0 0 0 0 0
...........................................................................................................CCGACTCACCGCAGTAGGGACTT......................................................................................................................... 23 0 8 0.75 6 5 0 1 0 0 0 0 0 0
.....GGGCCTTGGGGACCTTGACCTTCTT............................................................................................................................................................................................................................. 25 0 11 0.73 8 8 0 0 0 0 0 0 0 0
....................................................................................................................................................CACCATGGGTAGGGGTTCTTCTTACGT............................................................................ 27 0 7 0.71 5 5 0 0 0 0 0 0 0 0
............................................................................................................CGACTCACCGCAGTAGGGACTTCAGAC.................................................................................................................... 27 0 7 0.71 5 5 0 0 0 0 0 0 0 0
.......................................................................................................................................................CATGGGTAGGGGTTCTTCTTACGT............................................................................ 24 0 7 0.71 5 5 0 0 0 0 0 0 0 0
........................................................................................................................................................ATGGGTAGGGGTTCTTCTTACGT............................................................................ 23 0 7 0.71 5 5 0 0 0 0 0 0 0 0
..........................................................................................................................AGGGACTTCAGACCGCGTCCTAT.......................................................................................................... 23 0 10 0.70 7 7 0 0 0 0 0 0 0 0
...............................................................................................................CTCACCGCAGTAGGGACTTCAGAC.................................................................................................................... 24 0 9 0.67 6 3 1 1 0 1 0 0 0 0
...........................................................................................................................GGGACTTCAGACCGCGTCCTATTTT....................................................................................................... 25 0 9 0.67 6 5 0 1 0 0 0 0 0 0
..........................................................................................................ACCGACTCACCGCAGTAGGGACTTCAGA..................................................................................................................... 28 0 6 0.67 4 4 0 0 0 0 0 0 0 0
............................................................................................................CGACTCACCGCAGTAGGGACTT......................................................................................................................... 22 0 8 0.63 5 4 0 1 0 0 0 0 0 0
............................................................................................................CGACTCACCGCAGTAGGGACTTCAGA..................................................................................................................... 26 0 7 0.57 4 4 0 0 0 0 0 0 0 0
...........................................................................................................CCGACTCACCGCAGTAGGGACTTCAGA..................................................................................................................... 27 0 7 0.57 4 3 0 0 0 1 0 0 0 0
........................................................................................................ATACCGACTCACCGCAGTAGGGACT.......................................................................................................................... 25 0 7 0.57 4 2 1 1 0 0 0 0 0 0
.....................................................................................................................................................ACCATGGGTAGGGGTTCTTCTTACGT............................................................................ 26 0 7 0.57 4 4 0 0 0 0 0 0 0 0
...............................................................................................................CTCACCGCAGTAGGGACTTCAG...................................................................................................................... 22 0 9 0.56 5 4 0 1 0 0 0 0 0 0
....TGGGCCTTGGGGACCTTGACCTTCTT............................................................................................................................................................................................................................. 26 0 11 0.55 6 5 0 0 0 0 0 0 0 1
.....GGGCCTTGGGGACCTTGACCTTCT.............................................................................................................................................................................................................................. 24 0 11 0.55 6 6 0 0 0 0 0 0 0 0
....TGGGCCTTGGGGACCTTGACCTTCT.............................................................................................................................................................................................................................. 25 0 11 0.55 6 5 1 0 0 0 0 0 0 0
............................................................................................................................................................GTAGGGGTTCTTCTTACGTCTGGGAT..................................................................... 26 0 8 0.50 4 3 1 0 0 0 0 0 0 0
.............................................................................................................GACTCACCGCAGTAGGGACTTCAGA..................................................................................................................... 25 0 8 0.50 4 3 0 1 0 0 0 0 0 0
..............................................................................................................................................................AGGGGTTCTTCTTACGTCTGGGA...................................................................... 23 0 8 0.50 4 4 0 0 0 0 0 0 0 0
.........................................................................................................TACCGACTCACCGCAGTAGGGACTTCAG...................................................................................................................... 28 0 6 0.50 3 3 0 0 0 0 0 0 0 0
.......................................................................................................CATACCGACTCACCGCAGTAGGGACTT......................................................................................................................... 27 0 6 0.50 3 2 0 1 0 0 0 0 0 0
..................................................................................................................................................................GTTCTTCTTACGTCTGGGAT..................................................................... 20 0 8 0.50 4 4 0 0 0 0 0 0 0 0
.............................................................................................................................................................TAGGGGTTCTTCTTACGTCTGGGAT..................................................................... 25 0 8 0.50 4 1 3 0 0 0 0 0 0 0
...............................................................................................................................................................GGGGTTCTTCTTACGTCTGGGA...................................................................... 22 0 8 0.50 4 4 0 0 0 0 0 0 0 0
..............................................................................................................ACTCACCGCAGTAGGGACTTCAGA..................................................................................................................... 24 0 8 0.50 4 3 1 0 0 0 0 0 0 0
.......................................................................................................................................CGCGTCCTATTTTCACCATGGGT............................................................................................. 23 0 8 0.50 4 4 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AAGTTTAGGTATCTCCCCAACTATT 25 0 8 0.50 4 4 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................GGTATCCGGCTAAACAAACT.................................... 20 0 6 0.50 3 3 0 0 0 0 0 0 0 0
..................................................................................................................................CAGACCGCGTCCTATTTTCACCAT................................................................................................. 24 0 9 0.44 4 4 0 0 0 0 0 0 0 0
.............................................................................................................GACTCACCGCAGTAGGGACT.......................................................................................................................... 20 0 9 0.44 4 4 0 0 0 0 0 0 0 0
.....................................................................................................................GCAGTAGGGACTTCAGACCGCGTCCT............................................................................................................ 26 0 9 0.44 4 3 0 0 1 0 0 0 0 0
........................................................................................................ATACCGACTCACCGCAGTAGGGACTT......................................................................................................................... 26 0 7 0.43 3 1 2 0 0 0 0 0 0 0
.........................................................................................................................................................TGGGTAGGGGTTCTTCTTACGT............................................................................ 22 0 7 0.43 3 3 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AGGTTTTGGTATCCGGCTAAACAAAC..................................... 26 0 5 0.40 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGGTTTTGGTATCCGGCTAAACAAACT.................................... 27 1 5 0.40 2 2 0 0 0 0 0 0 0 0
.....GGGCCTTGGGGACCTTGACCT................................................................................................................................................................................................................................. 21 0 13 0.38 5 5 0 0 0 0 0 0 0 0
.............................................................................................................GACTCACCGCAGTAGGGACTTCAGAC.................................................................................................................... 26 0 8 0.38 3 2 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................CAAGTTTAGGTATCTCCCCAACTAT. 25 0 8 0.38 3 2 0 1 0 0 0 0 0 0
..............................................................................................................................................................AGGAGTTCTTCTTACGTCTGGGAT..................................................................... 24 1 8 0.38 3 3 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ACAAGTTTAGGTATCTCCCCAACTAT. 26 0 8 0.38 3 3 0 0 0 0 0 0 0 0
.................................................................................................................................................................GGTTCTTCTTACGTCTGGGA...................................................................... 20 0 8 0.38 3 3 0 0 0 0 0 0 0 0
......................................................................................................................CAGTAGGGACTTCAGACCGCGTCCT............................................................................................................ 25 0 9 0.33 3 2 0 1 0 0 0 0 0 0
...................................................................................................................CCGCAGTAGGGACTTCAGACCG.................................................................................................................. 22 0 9 0.33 3 3 0 0 0 0 0 0 0 0
.....................................................................................................TTCATACCGACTCACCGCAGTAGGGACT.......................................................................................................................... 28 0 6 0.33 2 2 0 0 0 0 0 0 0 0
................................................................................................................TCACCGCAGTAGGGACTTCAGAC.................................................................................................................... 23 0 9 0.33 3 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TATCCGGCTAAACAAAATT................................... 19 2 9 0.33 3 0 0 0 0 0 0 3 0 0
.............................................................................................................................GACTTCAGACCGCGTCCTATTTT....................................................................................................... 23 0 9 0.33 3 3 0 0 0 0 0 0 0 0
................................................................................................................................TTCAGACCGCGTCCTATTTTCACCAT................................................................................................. 26 0 9 0.33 3 3 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TTTAGGTATCTCCCCAACTATT 22 0 9 0.33 3 3 0 0 0 0 0 0 0 0
.................................................................................................................................TCAGACCGCGTCCTATTTT....................................................................................................... 19 0 10 0.30 3 3 0 0 0 0 0 0 0 0
.........................................................................................................TACCGACTCACCGCAGTAGGGACT.......................................................................................................................... 24 0 7 0.29 2 2 0 0 0 0 0 0 0 0
.....................................................................................................TCCATACCGACTCACCGCAGTAGGGACT.......................................................................................................................... 28 1 7 0.29 2 1 0 0 0 1 0 0 0 0
.........................................................................................................TACCGACTCACCGCAGTAGGGACTT......................................................................................................................... 25 0 7 0.29 2 0 0 1 1 0 0 0 0 0
....................................................................................................................................................................................................GTATCCGGCTAAACAAACT.................................... 19 0 7 0.29 2 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................ACCATGGGTAGGGGTTCTTCT................................................................................. 21 0 7 0.29 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................GGGTAGGGGTTCTTCTTACGTCT.......................................................................... 23 0 8 0.25 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................AAAAGGGGTTCTTCTTACGTCTGGGAT..................................................................... 27 3 8 0.25 2 1 1 0 0 0 0 0 0 0
.............................................................................................................GACTCACCGCAGTAGGGACTTCA....................................................................................................................... 23 0 8 0.25 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................................AAGGGGTTCTTCTTACGTCTGGGAT..................................................................... 25 1 8 0.25 2 1 0 1 0 0 0 0 0 0
.................................................................................................................CACCGCAGTAGGGACTTCAGACCG.................................................................................................................. 24 0 8 0.25 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................CCTATTTTCACCATGGGTAGGGGT....................................................................................... 24 0 8 0.25 2 2 0 0 0 0 0 0 0 0
....TGGGCCTTGGGGACCTTGACCTT................................................................................................................................................................................................................................ 23 0 12 0.25 3 1 1 0 1 0 0 0 0 0
...........................................................................................................CCGACTCACCGCAGTAGGGACT.......................................................................................................................... 22 0 8 0.25 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................GGGTAGGGGTTCTTCTTACG............................................................................. 20 0 8 0.25 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................GGGTAGGGGTTCTTCTTACGTCTGAT....................................................................... 26 2 8 0.25 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................................GTAGGGGTTCTTCTTACGTCTGGGA...................................................................... 25 0 8 0.25 2 2 0 0 0 0 0 0 0 0
...............................................................................................................CTCACCGCAGTAGGGACTTCAGACCG.................................................................................................................. 26 0 8 0.25 2 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................GGGTAGGGGTTCTTCTTACGTCTGGGAT..................................................................... 28 0 8 0.25 2 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGGGGTGCTTCTTACGTCTGGGAT..................................................................... 24 1 8 0.25 2 2 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AGTTTAGGTATCTCCCCAACTAT. 23 0 8 0.25 2 2 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CCGGCTAAACAAACTAGTTGTGCGAC......................... 26 0 4 0.25 1 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................GGTAGGGGTTCTTCTTACGTCTGGGAT..................................................................... 27 0 8 0.25 2 2 0 0 0 0 0 0 0 0
............................................................................................................................................................GTAGGGGTTCTTCTTACGT............................................................................ 19 0 8 0.25 2 1 0 0 0 0 1 0 0 0
.TGCTGGGCCTTGGGGACCTTGACCT................................................................................................................................................................................................................................. 25 0 13 0.23 3 3 0 0 0 0 0 0 0 0
...CTGGGCCTTGGGGACCTTGACCT................................................................................................................................................................................................................................. 23 0 13 0.23 3 2 0 0 1 0 0 0 0 0
CTGCTGGGCCTTGGGGACCTTGACCT................................................................................................................................................................................................................................. 26 0 13 0.23 3 3 0 0 0 0 0 0 0 0
.......................................................................................................................AGTAGGGACTTCAGACCGCGTCCT............................................................................................................ 24 0 9 0.22 2 1 0 0 1 0 0 0 0 0
............................................................................................................................................................ATAGGGGTTCTTCTTACGT............................................................................ 19 1 9 0.22 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................TCAGACCGCGTCCTATTTTCACCA.................................................................................................. 24 0 9 0.22 2 2 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................TTAGGTATCTCCCCAACTATT 21 0 9 0.22 2 2 0 0 0 0 0 0 0 0
...............................................................................................................CTCACCGCAGTAGGGACTTCAGA..................................................................................................................... 23 0 9 0.22 2 2 0 0 0 0 0 0 0 0
......................................................................................................................CAGTAGGGACTTCAGACCGCGT............................................................................................................... 22 0 9 0.22 2 2 0 0 0 0 0 0 0 0
.....................................................................................................................GCAGTAGGGACTTCAGACCGC................................................................................................................. 21 0 9 0.22 2 2 0 0 0 0 0 0 0 0
....................TGACCTTCTTAAGGACCGGAAGGATTT............................................................................................................................................................................................................ 27 0 14 0.21 3 3 0 0 0 0 0 0 0 0
..........................................................................................................................AGGGACTTCAGACCGCGTCCTATT......................................................................................................... 24 0 10 0.20 2 1 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................AAGGTTTTGGTATCCGGCTAAACAAAAT.................................... 28 1 5 0.20 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................GAGGTTTTGGTATCCGGCTAAACAAACT.................................... 28 1 5 0.20 1 1 0 0 0 0 0 0 0 0
............................................................................................................................GGACTTCAGACCGCGTCCTATTT........................................................................................................ 23 0 10 0.20 2 2 0 0 0 0 0 0 0 0
........................CTTCTTAAGGACCGGAAGGATTTT........................................................................................................................................................................................................... 24 0 15 0.20 3 2 0 0 1 0 0 0 0 0
..........................................................................................................................AGGGACTTCAGACCGCGTCCTATTT........................................................................................................ 25 0 10 0.20 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................GGGACTTCAGACCGCGTCCTAT.......................................................................................................... 22 0 10 0.20 2 2 0 0 0 0 0 0 0 0
.......................................................................................................CATACCGACTCACCGCAGTAGGGACT.......................................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TTCATACCGACTCACCGCAGTAGGGACTT......................................................................................................................... 29 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................................................................................ACCGACTCACCGCAGTAGGGACTTCGG...................................................................................................................... 27 1 6 0.17 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................................TTTGGTATCCGGCTAAACAAA...................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................................................................................ACCGACTCACCGCAGTAGGGACTTCAGAC.................................................................................................................... 29 0 6 0.17 1 1 0 0 0 0 0 0 0 0
........................................................................................................TTACCGACTCACCGCAGTAGGGACTTCAG...................................................................................................................... 29 1 6 0.17 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................TGGTATCCGGCTAAACAAAC..................................... 20 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..........................................................................................................AACGACTCACCGCAGTAGGGACTTCAG...................................................................................................................... 27 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.........................................................................................................AACCGACTCACCGCAGTAGGGACTTCAG...................................................................................................................... 28 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TTCATACCGACTCACCGCAGTAGGGAC........................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GGTTTTGGTATCCGGTTAAACAAACT.................................... 26 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGGTATCCGGCTAAACAAACTG................................... 23 1 6 0.17 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................TTTGGTATCCGGCTAAACAAACTA................................... 24 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................ATGGTATCCGGCTAAACAAACT.................................... 22 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.......................................................................................................CATACCGACTCACCGCAGTAGGGAC........................................................................................................................... 25 0 6 0.17 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................ATGGTTCTTCTTACGTCTGGGATC.................................................................... 24 2 6 0.17 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGGTATCCGGCTAAACAAAC..................................... 21 0 6 0.17 1 1 0 0 0 0 0 0 0 0
......................................................................................................TCATACCGACTCACCGCAGTAGGGACTT......................................................................................................................... 28 0 6 0.17 1 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................CTGGTATCCGGCTAAACAAACT.................................... 22 1 6 0.17 1 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................TTTGGTATCCGGCTAAACAAACTG................................... 24 1 6 0.17 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGGTATCCGGCTAAACAAAGT.................................... 22 1 6 0.17 1 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................TTTTGGTATCCGGCTAAACAAAC..................................... 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................GTTTTGGTATCCGGCTAA........................................... 18 0 6 0.17 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................AAGGAAGGTTTTGGTATCCGGCT............................................. 23 0 6 0.17 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................CCATGGGTAGGGGTTCTTCTTACG............................................................................. 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................CATGGGTAGGGGTTCTTCT................................................................................. 19 0 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................CACCATGGGTAGGGGTGCTTCTTACGT............................................................................ 27 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................ACCATGGGTAGGGGTTCTTCTTACG............................................................................. 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................TTGGGTAGGGGTTCTTCTTACG............................................................................. 22 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................................................................................................CCGACTCACCGCAGTAGGGACTTCA....................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..........................................................................................................ACCGACTCACCGCAGTAGGGACTTC........................................................................................................................ 25 0 7 0.14 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................AACCATGGGTAGGGGTTCTTCTTACGT............................................................................ 27 1 7 0.14 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................TTTTCACCATGGGTAGGGGTTCTTCTT................................................................................ 27 0 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................................................................................................TCGACTCACCGCAGTAGGGACTTCA....................................................................................................................... 25 1 7 0.14 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................ATGGGTAGGGGTTCTTCTT................................................................................ 19 0 7 0.14 1 0 1 0 0 0 0 0 0 0
......................................................................................................AAATACCGACTCACCGCAGTAGGGACT.......................................................................................................................... 27 2 7 0.14 1 1 0 0 0 0 0 0 0 0
............................................................................................................CTACTCACCGCAGTAGGGACTTCATA..................................................................................................................... 26 2 7 0.14 1 0 0 1 0 0 0 0 0 0
..................................................................................................................................................TTCACCATGGGTAGGGGTTCTTCT................................................................................. 24 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.......................................................................................................AATACCGACTCACCGCAGTAGGGACT.......................................................................................................................... 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...........................................................................................................CCGACTCACCGCAGTAGGGACTTCAGAC.................................................................................................................... 28 0 7 0.14 1 0 0 0 0 1 0 0 0 0
........................................................................................................................................................ATGGGTAGGGGTTCTTCTTACG............................................................................. 22 0 7 0.14 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................ATGGGTAGGGGTTCTTCTTAC.............................................................................. 21 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTGGTATCCTGCTAAACAAACT.................................... 22 1 7 0.14 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................ATTTTCACCATGGGTAGGGGTTCTTCT................................................................................. 27 0 7 0.14 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................................TCACCATGGGTAGGGGTTCTTCTTACGT............................................................................ 28 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................ACCATGGCTAGGGGTTCTTCTTACGT............................................................................ 26 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.........................................................................................................CACCGACTCACCGCAGTAGGGACTT......................................................................................................................... 25 1 7 0.14 1 0 0 1 0 0 0 0 0 0
......................................................................................................................................................CCATGGGTAGGGGTTCTTCTTACGT............................................................................ 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................TTCACCATGGGTAGGGGTTCTTCTT................................................................................ 25 0 7 0.14 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................CACCATGGGTAGGGGTTCTTCTTACG............................................................................. 26 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.....................................................................................................TCCATACCGACTCACCGCAGTAGGGACTT......................................................................................................................... 29 1 7 0.14 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................CCATGGGTAGGGGTTCTTCT................................................................................. 20 0 7 0.14 1 1 0 0 0 0 0 0 0 0
.........................................................................................................TACCGACTCACCTCAGTAGGGACT.......................................................................................................................... 24 1 7 0.14 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CAAGTTTAGGTATCTCCCCAACTA.. 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.............................................................................................................AACTCACCGCAGTAGGGACTTCAG...................................................................................................................... 24 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CAAGTTTAGGTATCTCCCCAACTAGT 26 1 8 0.13 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................GGTAGGGGTTCTTCTTACGTCTGAT....................................................................... 25 2 8 0.13 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................AAATGGGTAGGGGTTCTTCT................................................................................. 20 2 8 0.13 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................CGGGGTTCTTCTTACGTCTGGGAT..................................................................... 24 1 8 0.13 1 0 1 0 0 0 0 0 0 0
.................................................................................................................CACCGCAGTAGGGACTTCAGACCGCGTCCT............................................................................................................ 30 0 8 0.13 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................GGGTAGGGGTGCTTCTTACGT............................................................................ 21 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TAAGTTTAGGTATCTCCCCAACTATT 26 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................GGTAGGGGTTCTTCTTACGTCTGGGA...................................................................... 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0
............................................................................................................TGACTCACCGCAGTAGGGACTTCAGA..................................................................................................................... 26 1 8 0.13 1 0 0 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................AACAAGTTTAGGTATCTCCCCAACTATT 28 1 8 0.13 1 1 0 0 0 0 0 0 0 0
............................................................................................................CGACTCACCGCAGTAGGGACT.......................................................................................................................... 21 0 8 0.13 1 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................GGTTAGGGGTTCTTCTTACGTCTGAT....................................................................... 26 3 8 0.13 1 0 0 0 0 0 1 0 0 0
....................................................................................................................................GACCGCGTCCTATTTTCACCATG................................................................................................ 23 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................AAAGTTTAGGTATCTCCCCAACTAT. 25 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGGGTTCTTCTTACGTCTGATC...................................................................... 22 3 8 0.13 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TTAGGGGTTCTTCTTACGT............................................................................ 19 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................AAGGGGTGCTTCTTACGTCTGGGAT..................................................................... 25 2 8 0.13 1 0 1 0 0 0 0 0 0 0
.......................................................................................................................................TGCGTCCTATTTTCACCATGGGT............................................................................................. 23 1 8 0.13 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GACAAGTTTAGGTATCTCCCCAACTA.. 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGGGGTTCTTCTTACGTCTG......................................................................... 20 0 8 0.13 1 1 0 0 0 0 0 0 0 0
................................................................................................................ACACCGCAGTAGGGACTTCAGACCGCGT............................................................................................................... 28 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................GGTAGGGGTTCTTCTTACGTCT.......................................................................... 22 0 8 0.13 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................GGGTTCTTCTTACGTCTGGGA...................................................................... 21 0 8 0.13 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................GTAGGGGTTCTGCTTACGTCTGGGAT..................................................................... 26 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................AGGGTTCTTCTTACGTCTGGGAT..................................................................... 23 1 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................CAGACCGCGTCCTATTTTCACCATGGGT............................................................................................. 28 0 8 0.13 1 0 0 1 0 0 0 0 0 0
......GGCCTTGGGGACCTTGACCT................................................................................................................................................................................................................................. 20 0 16 0.13 2 2 0 0 0 0 0 0 0 0
.............................................................................................................................................CTATTTTCACCATGGGTAGGGG........................................................................................ 22 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................AAACAAGTTTAGGTATCTCCCCAACTATT 29 2 8 0.13 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................GCGTCCCATTTTCACCATGGGT............................................................................................. 22 1 8 0.13 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................GGGTAGGGGTTCTTCTTAC.............................................................................. 19 0 8 0.13 1 1 0 0 0 0 0 0 0 0
.............................................................................................................CACTCACCGCAGTAGGGACTTCAGA..................................................................................................................... 25 1 8 0.13 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................CTATTTTCACCATGGGTAGGGGTT...................................................................................... 24 0 8 0.13 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................TGGGGTTCTTCTTACGTCTGGGAT..................................................................... 24 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................TCAGACCGCGTCCTATTTTCACTATG................................................................................................ 26 1 8 0.13 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................TGTTCTTCTTACGTCTGGGAT..................................................................... 21 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................TCAGACCGCGTCCTATTTTCACCATG................................................................................................ 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................AGGGGTTCTGCTTACGTCTGGGAT..................................................................... 24 1 8 0.13 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................GACCGCGTCCTATTTTCACCATGGGT............................................................................................. 26 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................GGGTAAGGGTTCTTCTTACGTCTGAT....................................................................... 26 3 8 0.13 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................GGTAGGGGTTCTTCTTACGTCTG......................................................................... 23 0 8 0.13 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGGGTTCTGCTTACGTCTGGGAT..................................................................... 23 1 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................AAGTTTAGGTATCTCCCCAACTAT. 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................GGGTTCTGCTTACGTCTGGGAT..................................................................... 22 1 8 0.13 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................GGAGTTCTTCTTACGTCTGGGAT..................................................................... 23 1 8 0.13 1 1 0 0 0 0 0 0 0 0
...........................................................................................................CCGACTCACCGCAGTGGGGACT.......................................................................................................................... 22 1 8 0.13 1 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................GCGACAAGTTTAGGTATC............ 18 0 8 0.13 1 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................TGGGTTCTTCTTACGTCTGGGAT..................................................................... 23 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................ACCGCGTCCTATTTTCACCATGGGT............................................................................................. 25 0 8 0.13 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................TGTGCGACAAGTTTAGGTATCTCC......... 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GACAAGTTTAGGTATCTCCCCAACTAGT 28 1 8 0.13 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................GGTAGGGGTGCTTCTTACGTCT.......................................................................... 22 1 8 0.13 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................AAATGGGTAGGGGTTCTTCTTACGT............................................................................ 25 2 8 0.13 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................GTTCTTCTTACGTCTGGGA...................................................................... 19 0 8 0.13 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGGGTTCTTCTTACGTCTGG........................................................................ 20 0 8 0.13 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GACAAGTTTAGGTATCTCCCCAAC.... 24 0 8 0.13 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................TTAGGGGTTCTTCTTACGTCTGGGAT..................................................................... 26 1 8 0.13 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................GGGTAGGGGTTCTTCTTGCGT............................................................................ 21 1 8 0.13 1 0 1 0 0 0 0 0 0 0
..................................................................................................................................................TTCACCATGGGTAGGGGTGCTT................................................................................... 22 1 8 0.13 1 1 0 0 0 0 0 0 0 0
......................................................................................................CCATACCGACTCACCGCAGTAGGGACT.......................................................................................................................... 27 1 8 0.13 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................GACCGCGTCCTATTTTCACCAT................................................................................................. 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0
...................................................................................................................CCGCAGTAGTGACTTCAGACCGCGTCCT............................................................................................................ 28 1 9 0.11 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................GCAGTAGGGACTTCAGACCG.................................................................................................................. 20 0 9 0.11 1 1 0 0 0 0 0 0 0 0
........................................................................................................................GTAGGGACTTCAGACCGCG................................................................................................................ 19 0 9 0.11 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................GGGGTTCTTATTACGTCGGGGAT..................................................................... 23 2 9 0.11 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................AGACCGCGTCCTATTTTCACCAT................................................................................................. 23 0 9 0.11 1 1 0 0 0 0 0 0 0 0
............................................................................................................................GGACTTCAGACCGCGTCCTATTGT....................................................................................................... 24 1 9 0.11 1 0 0 1 0 0 0 0 0 0
...............................................................................................................ATCACCGCAGTAGGGACTTCAGA..................................................................................................................... 23 1 9 0.11 1 1 0 0 0 0 0 0 0 0
..................................................................................................................AAAGCAGTAGGGACTTCAG...................................................................................................................... 19 2 9 0.11 1 0 0 0 1 0 0 0 0 0
.......................................................................................................................AGTAGGGACTTCAGACCGCGTCCTAT.......................................................................................................... 26 0 9 0.11 1 1 0 0 0 0 0 0 0 0
....................................................................................................................CGCAGTAGGGACTTCAGACCGC................................................................................................................. 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................GCAGTAGGGACTTCAGACCGCGTC.............................................................................................................. 24 0 9 0.11 1 0 1 0 0 0 0 0 0 0
......................................................................................................................CAGTAGGGACTTCAGACCGCGTCCTAT.......................................................................................................... 27 0 9 0.11 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................GTAGGGGTGCTTCTTACG............................................................................. 18 1 9 0.11 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................TAGGGACTTCAGACCGCGTCCTATT......................................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0 0 0
........................................................................................................................GTAGGGACTTCAGACCGCGTCCTAT.......................................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0 0 0
................................................................................................................................TTCAGACCGCGTCCTATTTTCACCA.................................................................................................. 25 0 9 0.11 1 1 0 0 0 0 0 0 0 0
...................................................................................................................CCGCAGTAGGGACTTCAGACCGCGT............................................................................................................... 25 0 9 0.11 1 1 0 0 0 0 0 0 0 0
............................................................................................................TGACTCACCGCAGTAGGGACTT......................................................................................................................... 22 1 9 0.11 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................GGTAGTGGTTCTTCTTACGTCTGGGAT..................................................................... 27 1 9 0.11 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................GTAGGGGTTCTTCTAACGTCTGGGAT..................................................................... 26 1 9 0.11 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................AGTAGGGGTTCTTCTTACGT............................................................................ 20 1 9 0.11 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................ACAGTAGGGACTTCAGACCGCGTCCT............................................................................................................ 26 1 9 0.11 1 0 0 0 1 0 0 0 0 0
....................................................................................................................CGCAGTAGGGACTTCAGACCGCGTCCT............................................................................................................ 27 0 9 0.11 1 1 0 0 0 0 0 0 0 0
...............................................................................................................CTCACCGCAGTAGGGACTTCA....................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................AGTAGGGACTTCAGACCGCGT............................................................................................................... 21 0 9 0.11 1 0 0 0 0 0 1 0 0 0
.........................................................................................................................TAGGGACTTCAGACCGCGTCCTAT.......................................................................................................... 24 0 9 0.11 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................AGACCGCGTCCTATTTTCACCA.................................................................................................. 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0
...................................................................................................................................................TCACCATGGGTAGGGGTTC..................................................................................... 19 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.................................................................................................................CACCGCAGTAGGGACTTCAG...................................................................................................................... 20 0 9 0.11 1 0 0 1 0 0 0 0 0 0
...................................................................................................................CCGCAGTAGGGACTTCAGACCGCGTCCT............................................................................................................ 28 0 9 0.11 1 1 0 0 0 0 0 0 0 0
................................................................................................................TCACCGCAGTAGGGACTTCAGA..................................................................................................................... 22 0 9 0.11 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................CTTCAGACCGCGTCCTATTTTCACCAT................................................................................................. 27 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................GGTTCTTCTTACGTCGGGGAT..................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0
...............................................................................................................CTCACCGCAGTAGGGACTTCATA..................................................................................................................... 23 1 9 0.11 1 0 0 1 0 0 0 0 0 0
...................................................................................................................CCGCAGTAGGGACTTCAGACC................................................................................................................... 21 0 9 0.11 1 1 0 0 0 0 0 0 0 0
...................................................................................................................CCGCAGTAGGGACTTCAGACCGC................................................................................................................. 23 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................GGTTCTTCTAACGTCTGGGAT..................................................................... 21 1 9 0.11 1 1 0 0 0 0 0 0 0 0
.........................................................................................................................TAGGGACTTCAGACCGCGTCCTATTT........................................................................................................ 26 0 9 0.11 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................GCAGTAGGGACTTCAGATCGCGT............................................................................................................... 23 1 9 0.11 1 0 1 0 0 0 0 0 0 0
......................................................................................................................CAGTAGGGACTTCAGACCGCGTCCC............................................................................................................ 25 1 9 0.11 1 1 0 0 0 0 0 0 0 0
......................................................TTTCGATGGTTCACCCTTTTTT............................................................................................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0
............................................................................................................................GGACTTCAGACCGCGTCCTATTC........................................................................................................ 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0
............................................................................................................................GGACTTCAGACCGCGTCCTATT......................................................................................................... 22 0 10 0.10 1 1 0 0 0 0 0 0 0 0
............................................................................................................................GGACTTCAGACCCCGTCCTATTT........................................................................................................ 23 1 10 0.10 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................AGGGACTTCAGACCGCGT............................................................................................................... 18 0 10 0.10 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TAGGTATCTCCCCAACTATT 20 0 10 0.10 1 1 0 0 0 0 0 0 0 0
............................................................................................................................GGACTTCAGACCGCGTCCTAT.......................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................CAGACCGCGTCCTATTTTC...................................................................................................... 19 0 10 0.10 1 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................AGGAAGGGTTTAGTATCC................................................. 18 2 10 0.10 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................GGGACTTCAGACCGCGTCCTATTT........................................................................................................ 24 0 10 0.10 1 0 0 0 0 1 0 0 0 0
..GCTGGGCCTTCGGGACCTTGACCTTCT.............................................................................................................................................................................................................................. 27 1 11 0.09 1 1 0 0 0 0 0 0 0 0
...CTGGGCCTTGGGGACCTTGACCTTCT.............................................................................................................................................................................................................................. 26 0 11 0.09 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................TTTCAGACCGCGTCCTAT.......................................................................................................... 18 1 11 0.09 1 1 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
dp5 Unknown_group_764:24251-24501 + dps_2234 GAC-------GACCCGGAACCCCTGGAACTGGAAGAATTCCTGGCCTTCCTAAAAACCAGGAA--------------------------------------------------AGCTACCAAGTGGGAAAAAACAATACATTTTTGAAA-TTATAAATAAAGTATGGCTGAGTGGCGTCATCCCTGAAGTCTGGCGCAGGATAAAAGTGGTACCCATCCCCAAGAAGAA------TGCAGACCCTAGTTCCTTCCAAAACCATAGGCCG----ATTTGTTTGATCAACACGCTGTTCAAATCCATAGAGGGGTTGATAA
droPer2 scaffold_11:141485-141777 - GAC-------GACCCGGAACCCCTGGAACTGGAAGAATTCCTGGCCTTCCTAAAAACCAGGA--------ACCCCAAGAGGCCCTGATGGCATCTCGTTCAGGATGCTTCAAAAGCTACCAAGTGGGAAAAAACAAGACATTTTTGAAA-TTATAAATAAAGTATGGCTGAGTGGCGTCATCCCTGAAGTCTGGCGCAGGATAAAAGTGGTACCCATCCCCAAGAAGAA------TGCAGACCCTACTTCCTTCCAAAACCATAGGCCG----ATTTGTTTGATTAACACGCTGTTCAAATCCATAGAGGGGTTGATAA
droWil2 scf2_1100000004962:237040-237316 - GAT-------GACC------------------------TCCTTCAATTTTTAAAAACACACAGCTTGCACTCGGCCAAAGGCCTAGATAGAATCTCTTACAATATGTTGCTCACCCTTCCAGCAGGGGAACTTGAAAAATTAGCAGCTT-TGCTAAATGAAATTTTGAACAATGGACTCATTCCGGATGCCTGGAGAAATATAAAAGTCACCCCAGTACCAAAAAAAAA------TGTAGACTCTTCTTTAATCACAAATAATAGACCA----ATATGCTTGTTAAGTGTAGTGTTTAAATGTCTAGAAGGTCTTATTA
droAna3 scaffold_12902:284853-285153 - GAT-------ATAAGGAAACCCCTAAATTTTGATATTTTCAATGAATATCTAGTCTCAAGAAACCTGGACTCTGCACGGGGTCTGGATCATATAACATACAGAATGATCCAGAACCTACCTTTTCCCAAATTAAGGGAATTATATAATT-TACTGAACAATACCTGGATCTCGGGACTTTTTCCAGACGCATGGCGAAACATAAAAGTAGTCCCAGTTCCCAAAGAAAA------AGTATGCAATACACAAGTAGATAACTCTAGATCA----ATTTGTTTAATAAGCACACTCTGCAAATTAGTAGAGGGTATAATAA
droBip1 scf7180000396721:10166-10345 + AAA-------TC--------------------------------------------------------------------------------------------------------------------------AATAAACTACACAAACTACACAATAGTACCTGGATGACTGGACGCATACCAGACACTTGGCGAAATATAAAGGTAGTACCGGTACCCAAAGGGAA------AGTGTGGAACACACAATTTGATAATTTTAGGCCA----ATCTGTTTAATCACCGTACTTTGTAAAATAGTGGAGGGTATCTTAA
droEle1 scf7180000490104:221-485 + GCTATTCCATGTCCGAAATCCTTTTGAGTAAGATGACTTTTTGGAATTTATAGCTTCAAGAAAGCCTGACTCAGCAAGGGGACTAGATAAGTTATCGTATCGAATGATAA--------------------------------------------CAACAATGTATGGCTGTCTGGCCAGATACCAGAAAGCTGGAGGGAGATAAACGTGGTATCAATTCCAAAAAGAAA------CGCAGACTCATCATTTATAGATAACTATAGGCCA----ATTTGCTTGCTAAGCGTACTTTTTAAGATAACAGAGGGCCTTATTA
droRho1 scf7180000776645:2591-2839 - GAA-----------------------------------------------------------ACCCAAATTCAGCTAAAGGATTGGACAACATTTCTTACAAAATGATTCTGAGCTTTCCTAATAATCAATTGGAAAATTTATTACCCC-TTTTAAATGAAATTTTTATTAGCGGGACTATCCCTGATAGTTGGCGCAAAATAAAAGTGGTTCCAGTACCGAAAAAAAA------TGTATACGCCTCTATTGTGTCAAACAATAGACCG----ATTTGCCTTCTTAGTATTTTATTTAAGTGCTTAGAAGGTATGATTA
droBia1 scf7180000302503:17699-17943 + AAC-------TCTTTCGAAACCTTGGATTTT---------TTAGATTTTTTAGCTTCTAGAAAACCAGACTCAGCAAGAGGCCTAGATAATATAA-----------------------------------------------ATTAAAC-TCATTAACACTATATGGCTGTCCGTCCAAATTCAAGAAAGCTGGAGGGAAATAAAAGTAGTACCAATTCCAAAAAGAAA------CGCAGATTTAACCAACCTAGCCAACTACAGACCG----ATTTGTTTACTAAGCGTACTATTCAAAATATTAGAAGGGCTTATAA
droTak1 scf7180000410412:12674-12914 - GAT-------TA------------------------------------------------------------CGCAAAAGGACTGGATAAAATTTTGTATCGAATGATACAAACACTATCTCAGGTAAAGAAAGCTAAATGGTTCAATC-TCTGAAATTCTATATGGCTTTCCGGCCAAATCCCAGAATGCTGGAAAGAAATAAAATTAGTGCCAATCCCAAAGAAAAA------TGCCGACTCAACCAACTTAGCCAGTTACAGACCA----ATTTGTTTATTGAGCGTCTTATTCAAGGTACTAGAGGGGCTCATTA
droEug1 scf7180000405630:2632-2766 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCACTATACCGGATTCTTGGCGTAGAATTAAAGTTGTACCAGTCCCAAAAAAGAA------CACTGATTCTTCTATAATTACAAATAACCGACCA----ATCTGTCTTTTAAGTGTTGTGCTTAAATGTCTA--GGTCTTATTAC
dm3 chr2R:5646222-5646475 + ACT-------C---GAAATCCATTTGAATGAATGGACTTTCTAATCTATCTAGCAAACAGAAAGCCAGACTC-GCGCAATGACAATATAAA-------------------------------ACAATATAAAAGCGGATCTATTTAATC-TGCTTAACAGAATATGGTTATCAGCTCAAACC--------------AGAGATCAAAGCTGTCCCGATACCCAAAAAAAG--------CATACCCTTCAGTGGTTTCAAGCTTTTTACCTATGTATATGTCTCATAAGCGTTCTGTTTAAGATAACAGAAAGGCTAATAA
droSim2 2l:20797055-20797214 - AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------ACAATATGGTTATCAGGTCAAATCCCAGAAACTTAGGGAGAGATCAAAGTAGTCCCGATACCAAAAAAAAAAAAAAACACAGACCCCTCAGTGGTTTCAAACTTCAGACCT----ATATGTCTCATATGCGTTCTGTTTAAGATAACAGAAGGGCTAATAT
droSec2 scaffold_18:1295902-1296057 - AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------ACAATATGGTTATCAGGTCAAATCCCAGAAACTTAGGGAGAGATCAAAGTATTCCCGATACAAAAAAAAAA----AACACAGACCCCTCAGTGGTTTCAAACTTCAGACCT----ATGTGTCTCATATGCGTTCTGTTTAAGATAACAGAAGGGCTAATAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
dp5
GAC-------GACCCGGAACCCCTGGAACTGGAAGAATTCCTGGCCTTCCTAAAAACCAGGAA--------------------------------------------------AGCTACCAAGTGGGAAAAAACAATACATTTTTGAAA-TTATAAATAAAGTATGGCTGAGTGGCGTCATCCCTGAAGTCTGGCGCAGGATAAAAGTGGTACCCATCCCCAAGAAGAA------TGCAGACCCTAGTTCCTTCCAAAACCATAGGCCG----ATTTGTTTGATCAACACGCTGTTCAAATCCATAGAGGGGTTGATAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACCC........................................................................................................2682.251803000001320
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACCCA.......................................................................................................2782.131703100021010
..C-------GACCCGGAACCCCTGGAACTGG...............................................................................................................................................................................................................................................................................................23131.922502400000100
.................................................................................................................................................................................TCATCCCTGAAGTCTGGCGCAGGA......................................................................................................................2491.221101010000000
..C-------GACCCGGAACCCCTGGAACTG................................................................................................................................................................................................................................................................................................22131.081401400000000
..C-------GACCCGGAACCCCTGGAACTGGA..............................................................................................................................................................................................................................................................................................24131.081401400000000
.........................................................................................................................................................TAAATAAAGTATGGCTGAGTGGCGTC............................................................................................................................................2680.8870320000200
...............................................................................................................................................................................................................TGGTACCCATCCCCAAGAAGAA------TGCA................................................................................2670.8660400000200
..................................................................................................................................................................................CATCCCTGAAGTCTGGCGCAGG.......................................................................................................................2290.7870700000000
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACC.........................................................................................................2580.7560000000600
..........................................................................................................................................................................................................AAAAGTGGTACCCATCCCCAAGAA.............................................................................................2480.7560000000420
..........................................................................................................................................................................................................AAAAGTGGTACCCATCCCCAAGAAGAA------....................................................................................2770.7150000000500
...............................................................................................................................................................................................................TGGTACCCATCCCCAAGAAGAA------TGC.................................................................................2570.7150200000120
.........................................................................................................................................................TAAATAAAGTATGGCTGAGTGGCGTCA...........................................................................................................................................2770.7150300000110
.....................................................................................................................................................................................CCCTGAAGTCTGGCGCAGGATA....................................................................................................................22100.7070700000000
.....................................................................................................................................................................................CCCTGAAGTCTGGCGCAGGATAA...................................................................................................................23100.7070700000000
..................................................................................................................................................................................CATCCCTGAAGTCTGGCGCAG........................................................................................................................2190.6760600000000
..................................................................................................................................................................................CATCCCTGAAGTCTGGCGCAGGA......................................................................................................................2390.6760510000000
..C-------GACCCGGAACCCCTGGAACTGGAAG............................................................................................................................................................................................................................................................................................26110.6470700000000
....................................................................................................................................................................................................CAGGATAAAAGTGGTACCCATCCCC..................................................................................................2580.6350400001000
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTGGTAC..........................................................................................................2480.6350000000500
.....................................................................................................................................................................................CCCTGAAGTCTGGCGCAGGAT.....................................................................................................................21100.6060600000000
.......................................................................................................................................................................................................................................................TTCCTTCCAAAACCATAGGCCG----ATT...........................................2550.6030300000000
..........................................................................................................................................................................................................AAAAGTGGTACCCATCCCCAAGAAG............................................................................................2570.5740000000400
....................................................................................................................................................................................................CAGGATAAAAGTGGTACCCATCCC...................................................................................................2480.5040310000000
..C-------GACCCGGAACCCCTGGAACTGGAA.............................................................................................................................................................................................................................................................................................25120.5060400000200
....................................................................................................................................................................................................CAGGATAAAAGTGGTACCCATC.....................................................................................................2280.5040310000000
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTGG.............................................................................................................21100.5050000000500
..................................................................................................................................................................................................CGCAGGATAAAAGTGGTACC.........................................................................................................2080.5040400000000
............................................................................................................................................................................TGGCGTCATCCCTGAAGTCTGGCGC..........................................................................................................................2580.5040310000000
..............................................................................................................................................TTTGAAA-TTATAAATAAAGTATGGC.......................................................................................................................................................25100.5050320000000
.AC-------GACCCGGAACCCCTGGAACTG................................................................................................................................................................................................................................................................................................23130.4660600000000
.................................................................................................................................................................................TCATCCCTGAAGTCTGGCGCAG........................................................................................................................2290.4440300001000
.................................................................................................................................................................................TCATCCCTGAAGTCTGGCGCAGG.......................................................................................................................2390.4440400000000
...............................................................................................................................................................................................................TGGTACCCATCCCCAAGAAGAA------TGCAG...............................................................................2770.4330100000200
........................................................................................................................................................................................TGAAGTCTGGCGCAGGATAAAA.................................................................................................................22100.4040000000400
............................................................................................................................................................................................................................................................TCCAAAACCATAGGCCG----ATTTGTT.......................................2450.4020200000000
............................................................................................................................................................................................................................................................TCCAAAACCATAGGCCG----ATTTGTTTGAT...................................2850.4020100001000
............................................................................................................................................................................................................................................................TCCAAAACCATAGGCCG----ATTTGT........................................2350.4020200000000
........................................................................................................................................................................................................................................................TCCTTCCAAAACCATAGGCCG----ATT...........................................2450.4020200000000
.......................................................................................................................................................TATAAATAAAGTATGGCTGAGTGGCGTC............................................................................................................................................2880.3830120000000
..........................................................................................................................................................................AGTGGCGTCATCCCTGAAGTCTGG.............................................................................................................................2480.3830200000010
........................................................................................................................................................................TGAGTGGCGTCATCCCTGAAGTCTG..............................................................................................................................2580.3830100100100
....................................................................................................................................................................................................CAGGATAAAAGTGGTACCCATCCCCA.................................................................................................2680.3830300000000
.....................................................................................................................................................................................CCCTGAAGTCTGGCGCAGGATAAAAG................................................................................................................2690.3330300000000
......................................................................................................................................................................................CCTGAAGTCTGGCGCAGGATAAAAG................................................................................................................2590.3330300000000
....................................................................................................................................................................................................................................................................................TGTTTGATCAACACGCTGTTCAAA...................2460.3320000000020
.......................................................................................................................................................................................................................................................TTCCTTCCAAAACCATAGGCC...................................................2160.3320200000000
.....................................................................................................................................................................................CCCTGAAGTCTGGCGCAGGA......................................................................................................................20100.3030300000000
......................................................................................................................................................................................CCTGAAGTCTGGCGCAGGATAA...................................................................................................................22100.3030300000000
........................................................................................................................................................................................TGAAGTCTGGCGCAGGATAAAAG................................................................................................................23100.3030300000000
..............................................................................................................................................................................................................GTGGTACCCATCCCCAAGAAGAA------TGC.................................................................................2670.2920100001000
...............................................................................................................................................................................................................TGGTACCCATCCCCAAGAAGAA------TGCAGAC.............................................................................2970.2920200000000
...................CCCCTGGAACTGGAAGAATTCCTGG...................................................................................................................................................................................................................................................................................25140.2940400000000
....................................................................................................................................................................................................CAGGATAAAAGTGGTACCCATCC....................................................................................................2380.2520110000000
............................................................................................................................................................................TGGCGTCATCCCTGAAGTCTGG.............................................................................................................................2280.2520200000000
.................................................................................................................................................................................................GCGCAGGATAAAAGTGGTACCC........................................................................................................2280.2520200000000
...............................................................................................................................................................................................TGGCGCAGGATAAAAGTGGTACCCA.......................................................................................................2580.2520200000000
....................................................................................................................................................................................................CAGGATAAAAGTGGTACCCAT......................................................................................................2180.2520200000000
.........................................................................................................................................................................................................TAAAAGTGGTACCCATCCCCAAGAA.............................................................................................2580.2520000000200
..C-------GACCCGGAACCCCTGGAACT.................................................................................................................................................................................................................................................................................................21130.2330300000000
.AC-------GACCCGGAACCCCTGGAACTGG...............................................................................................................................................................................................................................................................................................24130.2330300000000
..............................................................................................................................................TTTGAAA-TTATAAATAAAGTATGGCT......................................................................................................................................................2690.2220200000000
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTGGTA...........................................................................................................2390.2220100000100
.................................................................................................................................................................................TCATCCCTGAAGTCTGGCGCA.........................................................................................................................2190.2220200000000
........................................................................................................................................................................TGAGTGGCGTCATCCCTG.....................................................................................................................................1890.2220000000200
.......................TGGAACTGGAAGAATTCCTGGAAA................................................................................................................................................................................................................................................................................24140.2130000000300
..........................AACTGGAAGAATTCCTGGCCTT...............................................................................................................................................................................................................................................................................22140.2130300000000
.........................................................................................................................................................................................GAAGTCTGGCGCAGGATAAAAGTGG.............................................................................................................25100.2020200000000
........................................................................................................................................................................................................................................................TCCTTCCAAAACCATAGGCCG----ATTTG.........................................2650.2010100000000
.......................................................................................................................................................................................................................................................TTCCTTCCAAAACCATAGGCCG----ATTTGTT.......................................2950.2010100000000
.........................................................................................................................................................................................................................................................CCTTCCAAAACCATAGGCCG----ATT...........................................2350.2010100000000
............................................................................................................................................................................................................................................................TCCAAAACCATAGGCCG----ATTTGTTTGAA...................................2850.2010100000000
............................................................................................................................................................................................................................................................TCCAAAACCATAGGCCG----ATTTG.........................................2250.2010100000000
.........................................................................................................................................................................................................................................................CCTTCCAAAACCATAGGCCG----ATTTG.........................................2550.2010100000000
...................................................................................................................................................................................................................................................................................TTGTTTGATCAACACGCTGTTCA.....................2350.2010000000010
............................................................................................................................................................................................................................................................TCCAAAACCATAGGCCG----ATTTGTTTG.....................................2650.2010100000000
.............................................................................................................................................................................................................................................................CCAAAACCATAGGCCG----ATTTGTTTGA....................................2650.2010100000000
.........................................................................................................................................................TAAATAAAGTATGGCTGAG...................................................................................................................................................19110.1820000000200
.........................................................................................................................................................TAAATAAAGTATGGCTGAGTGG................................................................................................................................................22110.1820100001000
.......................................................................................................................................................TATAAATAAAGTATGGCTGAGTGG................................................................................................................................................24110.1820200000000
..C-------GACCCGGAACCCCTGGAACTGGAAGAA..........................................................................................................................................................................................................................................................................................28110.1820200000000
.AC-------GACCCGGAACCCCTGGAACTGGAA.............................................................................................................................................................................................................................................................................................26120.1720200000000
.................................................................................................................................................................................................................................................................AACCATAGGCCG----ATTTGTTTGAT...................................2360.1710100000000
..............................................................................................................................................................................................................................................................CAAAACCATAGGCCG----ATTTGTTTG.....................................2460.1710100000000
..C-------GACCCGGAACCCCTGGAAC..................................................................................................................................................................................................................................................................................................20130.1520110000000
..........GACCCGGAACCCCTGGAACT.................................................................................................................................................................................................................................................................................................20130.1520200000000
..............................................................................................................................................................................................................GTGGTACCCATCCCCAAGAAGAA------....................................................................................2370.1410000000100
..................................................................................................................................................................................................................TACCCATCCCCAAGAAGAA------TGCAGAC.............................................................................2670.1410100000000
.................AACCCCTGGAACTGGAAGAATTC.......................................................................................................................................................................................................................................................................................23140.1420200000000
........................GGAACTGGAAGAATTCCTGGCCTTC..............................................................................................................................................................................................................................................................................25140.1420200000000
...................................................................................................................................................................................................................ACCCATCCCCAAGAAGAA------TGCAGAC.............................................................................2570.1410100000000
....................CCCTGGAACTGGAAGAATTCCTGG...................................................................................................................................................................................................................................................................................24140.1420200000000
.......................TGGAACTGGAAGAATTCCTGGCC.................................................................................................................................................................................................................................................................................23140.1420100000100
...................................................................................................................................................................................................................ACCCATCCCCAAGAAGAA------TGCAGACCC...........................................................................2770.1410100000000
..................................................................................................................................................................................................................TACCCATCCCCAAGAAGAA------TGCAGACCC...........................................................................2870.1410000001000
..............................................................................................................................................................................................................GTGGTACCCATCCCCAAGAAGAA------TGCA................................................................................2770.1410100000000
...............................................................................................................................................................................................................TGGTACCCATCCCCAAGAAGAA------TGCAGA..............................................................................2870.1410100000000
.................................................................................................................................................................................................................GTACCCATCCCCAAGAAGAA------TGCAGACCC...........................................................................2970.1410100000000
.......................TGGAACTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................................................................................24140.1420110000000
...................................................................................................................................................................ATGGCTGAGTGGCGTCATCCCTGAAG..................................................................................................................................2670.1410100000000
..............CGGAACCCCTGGAACTGGAAGAATTC.......................................................................................................................................................................................................................................................................................26140.1420100001000
.......................TGGAACTGGAAGAATTCCTGGC..................................................................................................................................................................................................................................................................................22140.1420200000000
................................................................................................................................................................................................................GGTACCCATCCCCAAGAAGAA------TGC.................................................................................2470.1410100000000
............................CTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................................................................................19140.1420200000000
.....................................................................................................................................................................................................................CCATCCCCAAGAAGAA------TGCAGACC............................................................................2480.1310000100000
........................................................................................................................................................................TGAGTGGCGTCATCCCTGAAGTCT...............................................................................................................................2480.1310100000000
............................................................................................................................................................................................GTCTGGCGCAGGATAAAAGTGGTAC..........................................................................................................2580.1310100000000
..............................................................................................................................................................................................CTGGCGCAGGATAAAAGTGGTACC.........................................................................................................2480.1310100000000
............................................................................................................................................................................TGGCGTCATCCCTGAAGTCTGGC............................................................................................................................2380.1310100000000
............................................................................................................................................................................TGGCGTCATCCCTGAAGTCTGGCG...........................................................................................................................2480.1310100000000
..........................................................................................................................................................................................................................CCCAAGAAGAA------TGCAGACCCTAAAA......................................................................2580.1310100000000
........................................................................................................................................................................................................................TCCCCAAGAAGAA------TGCAGACCCT..........................................................................2380.1310010000000
........................................................................................................................................................................TGAGTGGCGTCATCCCTGAAGTCAA..............................................................................................................................2580.1310100000000
....................................................................................................................................................................................................CAGGATAAAAGTGGTACCCATA.....................................................................................................2280.1310100000000
........................................................................................................................................................................TGAGTGGCGTCATCCCTGAAGTC................................................................................................................................2380.1310010000000
..................................................................................................................................................................................................CGCAGGATAAAAGTGGTACCCATCCCCA.................................................................................................2880.1310100000000
......................................................................................................................................................................................................................CATCCCCAAGAAGAA------TGC.................................................................................1880.1310100000000
....................................................................................................................................................................................................................CCCATCCCCAAGAAGAA------TGCAGACCC...........................................................................2680.1310100000000
...............................................................................................................................................................................................................................................................................................CACGCTGTTCAAATCCATAGAG..........2280.1310100000000
............................................................................................................................................................................TGGCGTCATCCCTGAAGTCTGGCGCAGG.......................................................................................................................2880.1310000001000
...............................................................................................................................................................................................TGGCGCAGGATAAAAGTGGTACC.........................................................................................................2380.1310000001000
........................................................................................................................................................................TGAGTGGCGTCATCCCTGAAGT.................................................................................................................................2280.1310100000000
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACCCGAG.....................................................................................................2980.1310000000100
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACCCAT......................................................................................................2880.1310000000100
.....................................................................................................................................................................................................AGGATAAAAGTGGTACCCATC.....................................................................................................2180.1310100000000
...................................................................................................................................................................................................GCAGGATAAAAGTGGTACCCATCCC...................................................................................................2580.1310100000000
........................................................................................................................................................................................................................TCCCCAAGAAGAA------TGCAGACCC...........................................................................2280.1310100000000
.....................................................................................................................................................................................................................CCATCCCCAAGAAGAA------TGCAGACCCT..........................................................................2680.1310100000000
.............................................................................................................................................................................................................................................................................................AACACGCTGTTCAAATCCATA.............2180.1310000000100
.........................................................................................................................................................................................................TAAAAGTGGTACCCATCCCCAAGAAA............................................................................................2680.1310010000000
..............................................................................................................................................................................................CTGGCGCAGGATAAAAGTGGTACCCA.......................................................................................................2680.1310100000000
........................................................................................................................................................................TGAGTGGCGTCATCCCTGAAGTCA...............................................................................................................................2480.1310100000000
............................................................................................................................................................................TGGCGTCATCCCTGAAGTCTGGCGCA.........................................................................................................................2680.1310100000000
...............................................................................................................................................................................................TGGCGCAGGATAAAAGTGGTAA..........................................................................................................2290.1110100000000
..................................................................................................................................................................................CATCCCTGAAGTCTGGCGCAGGATA....................................................................................................................2590.1110100000000
..........................................................................................................................................................................AGTGGCGTCATCCCTGAAGTCTG..............................................................................................................................2390.1110100000000
..............................................................................................................................................................................................CTGGCGCAGGATAAAAGTGGTA...........................................................................................................2290.1110100000000
...............................................................................................................................................................................CGTCATCCCTGAAGTCTGGCGCAG........................................................................................................................2490.1110100000000
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTGGT............................................................................................................2290.1110100000000
..................................................................................................................................................................................CATCCCTGAAGTCTGGCGCAGGAT.....................................................................................................................2490.1110010000000
.................................................................................................................................................................................TCATCCCTGAAGTCTGGCGCAGGAT.....................................................................................................................2590.1110100000000
...........................................................................................................................................................................GTGGCGTCATCCCTGAAGTCT...............................................................................................................................2190.1110100000000
.............................................................................................................................................................................GGCGTCATCCCTGAAGTCTGGCGT..........................................................................................................................2490.1110100000000
..................................................................................................................................................................TATGGCTGAGTGGCGTCATAAA.......................................................................................................................................2290.1110100000000
......................................................................................................................................................................................CCTGAAGTCTGGCGCAGGATAAAAGTG..............................................................................................................2790.1110100000000
.......................................................................................................................................................................................CTGAAGTCTGGCGCAGGATAAAAGTG..............................................................................................................2690.1110000001000
.........................................................................................................................................................................GAGTGGCGTCATCCCTGAAGTC................................................................................................................................2290.1110100000000
.................................................................................................................................................GAAA-TTATAAATAAAGTATGGCTGAGA..................................................................................................................................................2790.1110100000000
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGT...............................................................................................................19100.1010000000100
.....................................................................................................................................................................................CCCTGAAGTCTGGCGCAGGAA.....................................................................................................................21100.1010100000000
..............................................................................................................................................TTTGAAA-TTATAAATAAAGTATGG........................................................................................................................................................24100.1010100000000
......................................................................................................................................................................................CCTGAAGTCTGGCGCAGGAT.....................................................................................................................20100.1010100000000
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTG..............................................................................................................20100.1010100000000
....................................................................................................................................................................................TCCCTGAAGTCTGGCGCAGGATA....................................................................................................................23100.1010100000000
....................................................................................................................................................................................TCCCTGAAGTCTGGCGCAG........................................................................................................................19100.1010100000000
.......................................................................................................................................................................................CTGAAGTCTGGCGCAGGATAAA..................................................................................................................22100.1010100000000
........................................................................................................................................................................................TGAAGTCTGGCGCAGGATAAAAGTGG.............................................................................................................26100.1010100000000
......................................................................................................................................................................................CCTGAAGTCTGGCGCAGGT......................................................................................................................19100.1010100000000
.................................................................................................................................................GAAA-TTATAAATAAAGTATGGC.......................................................................................................................................................22100.1010010000000
..........................................................................................................................................................................................AAGTCTGGCGCAGGATAAAAGT...............................................................................................................22100.1010100000000
................................................................................................................................................TGAAA-TTATAAATAAAGTATGGC.......................................................................................................................................................23100.1010100000000
.......................................................................................................................................................................................CTGAAGTCTGGCGCAGGAT.....................................................................................................................19100.1010100000000
.....................................................................................................................................................................................CCCTGAAGTCTGGCGCAGGATAAA..................................................................................................................24100.1010000100000
....................................................................................................................................................................................TCCCTGAAGTCTGGCGCA.........................................................................................................................18100.1010100000000
.....................................................................................................................................................................................CCCTGAAGTCTGGCGCAGGAC.....................................................................................................................21100.1010100000000
..........GACCCGGAACCCCTGGAACTGGAAGA...........................................................................................................................................................................................................................................................................................26110.0910100000000
...................................................................................................................................................AA-TTATAAATAAAGTATGGCTA.....................................................................................................................................................22110.0910000100000
............CCCGGAACCCCTGGAACTGGAAGAAT.........................................................................................................................................................................................................................................................................................26110.0910100000000
..........................................................................................................................................................AAATAAAGTATGGCTGAGTGGC...............................................................................................................................................22110.0910000001000
.......................................................................................................................................................TATAAATAAAGTATGGCTGAGTGGC...............................................................................................................................................25110.0910100000000
..........................................................................................................................................................AAATAAAGTATGGCTGAGTGG................................................................................................................................................21110.0910100000000
.............................................................................................................................................................TAAAGTATGGCTGAGTGG................................................................................................................................................18110.0910100000000
.......................................................................................................................................................TATAAATAAAGTATGGCTGAGTGGCGC.............................................................................................................................................27110.0910100000000
..........GACCCGGAACCCCTGGAACTGGAAG............................................................................................................................................................................................................................................................................................25110.0910100000000
.........................................................................................................................................................TAAATAAAGTATGGCTGAGTGGCG..............................................................................................................................................24110.0910100000000
............CCCGGAACCCCTGGAACTGGAAGA...........................................................................................................................................................................................................................................................................................24110.0910100000000
..........GACCCGGAACCCCTGGAACTGGAA.............................................................................................................................................................................................................................................................................................24120.0810100000000
......................................................................................................................................................TTATAAATAAAGTATGGC.......................................................................................................................................................18120.0810100000000
...................................................................................................................CTACCAAGTGGGAAAAAACA........................................................................................................................................................................................20120.0810100000000
..C-------GACCCGGAACCCCTGGAA...................................................................................................................................................................................................................................................................................................19130.0810100000000
.AC-------GACCCGGAACCCCTGGAA...................................................................................................................................................................................................................................................................................................20130.0810100000000
..........GACCCGGAACCCCTGGAACTG................................................................................................................................................................................................................................................................................................21130.0810100000000
.AC-------GACCCGGAACCCCTGGAACT.................................................................................................................................................................................................................................................................................................22130.0810100000000
......................CTGGAACTGGAAGAATTCCTGGC..................................................................................................................................................................................................................................................................................23140.0710100000000
.................AACCCCTGGAACTGGAAGAATTCCTGGC..................................................................................................................................................................................................................................................................................28140.0710100000000
................GAACCCCTGGAACTGGAAGAA..........................................................................................................................................................................................................................................................................................21140.0710100000000
..................ACCCCTGGAACTGGAAGAATTCCT.....................................................................................................................................................................................................................................................................................24140.0710100000000
......................CTGGAACTGGAAGAATTCCTG....................................................................................................................................................................................................................................................................................21140.0710100000000
......................CTGGAACTGGAAGAATTCCTGGCCTT...............................................................................................................................................................................................................................................................................26140.0710100000000
...........................ACTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................................................................................20140.0710100000000
........................GGAACTGGAAGAATTCCTGGC..................................................................................................................................................................................................................................................................................21140.0710000000010
.................AACCCCTGGAACTGGAAGAATTCC......................................................................................................................................................................................................................................................................................24140.0710100000000
...........................ACTGGAAGAATTCCTGGCCTTCCT............................................................................................................................................................................................................................................................................24140.0710100000000
.............................TGGAAGAATTCCTGGCCTTCCTAA..........................................................................................................................................................................................................................................................................24140.0710010000000
..................ACCCCTGGAACTGGAAGAATTCC......................................................................................................................................................................................................................................................................................23140.0710100000000
..........................AACTGGAAGAATTCCTGGC..................................................................................................................................................................................................................................................................................19140.0710100000000
.........................GAACTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................................................................................22140.0710100000000
......................CTGGAACTGGAAGAATTCCTGGCCTTC..............................................................................................................................................................................................................................................................................27140.0710100000000
.......................TGGAACTGGAAGAATTCCTGGCCTTCC.............................................................................................................................................................................................................................................................................27140.0710100000000
...............GGAACCCCTGGAACTGGAAGAATTCC......................................................................................................................................................................................................................................................................................26140.0710100000000
.......................TGGAACTGGAAGAATTCCTGGCCTTC..............................................................................................................................................................................................................................................................................26140.0710000000100
....................CCCTGGAACTGGAAGAATTCCTG....................................................................................................................................................................................................................................................................................23140.0710100000000
....................CCCTGGAACTGGAAGAATTCCTGGCC.................................................................................................................................................................................................................................................................................26140.0710100000000
......................CTGGAACTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................................................................................25140.0710000000100
.......................TGGAACTGGAAGAATTCCTGG...................................................................................................................................................................................................................................................................................21140.0710100000000
........................GGAACTGGAAGAATTCCTGGCC.................................................................................................................................................................................................................................................................................22140.0710100000000
............................CTGGAAGAATTCCTGGCCTTCC.............................................................................................................................................................................................................................................................................22140.0710100000000
...........................ACTGGAAGAATTCCTGGCCTT...............................................................................................................................................................................................................................................................................21140.0710100000000
droPer2
GAC-------GACCCGGAACCCCTGGAACTGGAAGAATTCCTGGCCTTCCTAAAAACCAGGA--------ACCCCAAGAGGCCCTGATGGCATCTCGTTCAGGATGCTTCAAAAGCTACCAAGTGGGAAAAAACAAGACATTTTTGAAA-TTATAAATAAAGTATGGCTGAGTGGCGTCATCCCTGAAGTCTGGCGCAGGATAAAAGTGGTACCCATCCCCAAGAAGAA------TGCAGACCCTACTTCCTTCCAAAACCATAGGCCG----ATTTGTTTGATTAACACGCTGTTCAAATCCATAGAGGGGTTGATAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..C-------GACCCGGAACCCCTGGAACTGG...............................................................................................................................................................................................................................................................................................23160.315050000
..C-------GACCCGGAACCCCTGGAACTG................................................................................................................................................................................................................................................................................................22170.295140000
......................................................................................ATGGCATCTCGTTCAGGAT......................................................................................................................................................................................................................1990.222200000
..C-------GACCCGGAACCCCTGGAACTGGA..............................................................................................................................................................................................................................................................................................24160.193030000
.......................................................................................................................................................................................................................................................TTCCTTCCAAAACCATAGGCCG----ATT...........................................25110.182020000
.............................................................................................................................................................................................................................................................................................AACACGCTGTTCAAATCCATAGAG..........2470.141000001
.........................................................................................................................................................................................GAAGTCTGGCGCAGGATAAAAGTGG.............................................................................................................25160.132020000
..........GACCCGGAACCCCTGGAACTGGAAGAAT.........................................................................................................................................................................................................................................................................................28160.132000002
..........................................................................................................................................................................................................................................................................................ATTAACACGCTGTTCAAATCCATAG............2580.131010000
..C-------GACCCGGAACCCCTGGAACTGGAAG............................................................................................................................................................................................................................................................................................26160.132020000
.......................................................................................................................................................TATAAATAAAGTATGGCTGAGTG.................................................................................................................................................23100.101000001
.......................................................................................................................................................TATAAATAAAGTATGGCTGAGTGG................................................................................................................................................24100.101000001
.......................................................................................................................................................................................................................................................TTCCTTCCAAAACCATAGGCCG----ATG...........................................25110.091010000
..................................................................................................................................................................................................................................GAA------TGCAGACCCTACTTCCTTCCAAAA............................................................27120.081010000
..................ACCCCTGGAACTGGAAGAATTCCTGGCC.................................................................................................................................................................................................................................................................................28150.071100000
............................CTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................................................................................19150.071000010
...........................ACTGGAAGAATTCCTGGCCT................................................................................................................................................................................................................................................................................20150.071010000
.........................................................................................................................................................................................GAAGTCTGGCGCAGGATAAAAGTGGT............................................................................................................26160.061000001
........................................................................................................................................................................................TGAAGTCTGGCGCAGGATAAAAG................................................................................................................23160.061010000
.................................................................................................................................................................................TCATCCCTGAAGTCTGGCGCAGG.......................................................................................................................23160.061010000
.........................................................................................................................................................................................GAAGTCTGGCGCAGGATAAAAGTG..............................................................................................................24160.061000001
.........................................................................................................................................................................................GAAGTCTGGCGCAGGATAAAAGT...............................................................................................................23160.061000001
.............................................................................................................................................................................................TCTGGCGCAGGATAAAAGTGGTACCT........................................................................................................26160.061100000
..C-------GACCCGGAACCCCTGGAACTGGAA.............................................................................................................................................................................................................................................................................................25160.061010000
...................................................................................................................................................................................................GCAGGATAAAAGTGGTACCCATCCCCA.................................................................................................27160.061010000
..........GACCCGGAACCCCTGGAACTGG...............................................................................................................................................................................................................................................................................................22160.061010000
..................................................................................................................................................................................CATCCCTGAAGTCTGGCGCAGG.......................................................................................................................22160.061010000
..C-------GACCCGGAACCCCTGGAACT.................................................................................................................................................................................................................................................................................................21170.061010000
droWil2
GAT-------GACC------------------------TCCTTCAATTTTTAAAAACACACAGCTTGCACTCGGCCAAAGGCCTAGATAGAATCTCTTACAATATGTTGCTCACCCTTCCAGCAGGGGAACTTGAAAAATTAGCAGCTT-TGCTAAATGAAATTTTGAACAATGGACTCATTCCGGATGCCTGGAGAAATATAAAAGTCACCCCAGTACCAAAAAAAAA------TGTAGACTCTTCTTTAATCACAAATAATAGACCA----ATATGCTTGTTAAGTGTAGTGTTTAAATGTCTAGAAGGTCTTATTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................TCCAGCAGGGGAACTTGAAAAATTAGC...............................................................................................................................................................................2712.00202000
...........................................................ACAGCTTGCACTCGGCCAAAGGC.............................................................................................................................................................................................................................................2312.00201010
...........................................................................................................TGCTCACCCTTCCAGCAGG.................................................................................................................................................................................................1911.00101000
.......................................................................................................................................................................................................................GTACCAAAAAAAAA------TGTAGACT............................................................................2211.00101000
...........................................................ACAGCTTGCACTCGGCCAAAGG..............................................................................................................................................................................................................................................2211.00100010
......................................................................................................................................................TGCTAAATGAAATTTTGAACAATGGAC..............................................................................................................................................2711.00101000
......................................................AACACACAGCTTGCACTCGGCCAAAG...............................................................................................................................................................................................................................................2611.00101000
..................................................TAAAAACACACAGCTTGCACTCGGC....................................................................................................................................................................................................................................................2511.00101000
.................................................................................................................................................................ATTTTGAACAATGGACTCATTCCG......................................................................................................................................2440.75303000
...........................................................................................ATCTCTTACAATATGTTGCTCACCCT..........................................................................................................................................................................................................2620.50101000
......................................................................................................................................................................................................................................................................TAGACCA----ATATGCTTGTTAAGTGT.............................2460.33200110
.................................................................................................................................................................ATTTTGAACAATGGACTCATTCCGG.....................................................................................................................................2540.25101000
...................................................................................................................................................................................................GAAATATAAAAGTCACCCCAGTAC....................................................................................................2440.25101000
........................................................................................................................................................................................................ATAAAAGTCACCCCAGTACCAA.................................................................................................2240.25101000
.................................................................................................................................................................ATTTTGAACAATGGACTCATTCCGGA....................................................................................................................................2640.25101000
.................................................................................................................................................................ATTTTGAACAATGGACTCATTCC.......................................................................................................................................2340.25101000
............................................................................................................................................................................................GCCTGGAGAAATATAAAAGTCACCC..........................................................................................................2540.25100010
...................................................................................................................................................................TTTGAACAATGGACTCATTCCGT.....................................................................................................................................2350.20110000
..........................................................................................................................................................................AATGGACTCATTCCGGATGCCTGGA............................................................................................................................2550.20101000
......................................................................................................................................................................GAACAATGGACTCATTCCGGATGCCTG..............................................................................................................................2750.20101000
....................................................................................................................................................................TTGAACAATGGACTCATTCCGGA....................................................................................................................................2350.20101000
.........................................................................................................................................................................CAATGGACTCATTCCGGATGCCTG..............................................................................................................................2450.20110000
............................................................................................................................................................................................GCCTGGAGAAATATAAAAGTCA.............................................................................................................2250.20101000
......................................................................................................................................................................GAACAATGGACTCATTCCGGATG..................................................................................................................................2350.20101000
.........................................................................................................................................................................................................................................................TAATCACAAATAATAGACCA----ATATGCT.......................................2750.20101000
..........................................................................................................................................................................AATGGACTCATTCCGGATGCCTGGAG...........................................................................................................................2650.20101000
......................................................................................................................................................................................................................................................................TAGACCA----ATATGCTTGTTAAGTGTAG...........................2660.17101000
.................................................................................................................................................................................TCATTCCGGATGCCTGGAGAAATA......................................................................................................................2460.17101000
...................................................................................................................................................................................................................................................................................ATGCTTGTTAAGTGTAGTGTTTAAA...................2570.14101000
...................................................................................................................................................................................................................................................................................ATGCTTGTTAAGTGTAGTGTTTA.....................2370.14101000
........................................................................................................................................................................................................................................................................................TGTTAAGTGTAGTGTTTAAATGTCT..............2580.13101000
................................................................................................................................................................................................................................................................................................GTAGTGTTTAAATGTCTAGAAGGTC......2580.13101000
........................................................................................................................................................................................................................................................................................................TAAATGTCTAGAAGGTCTTATTA2380.13101000
................................................................................................................................................................................................................................................................................................GTAGTGTTTAAATGTCTAGAAGGTCT.....2680.13101000
..................................................................................................................................................................................................................................................................................................AGTGTTTAAATGTCTAGAAGGTCTT....2590.11100100
droAna3
GAT-------ATAAGGAAACCCCTAAATTTTGATATTTTCAATGAATATCTAGTCTCAAGAAACCTGGACTCTGCACGGGGTCTGGATCATATAACATACAGAATGATCCAGAACCTACCTTTTCCCAAATTAAGGGAATTATATAATT-TACTGAACAATACCTGGATCTCGGGACTTTTTCCAGACGCATGGCGAAACATAAAAGTAGTCCCAGTTCCCAAAGAAAA------AGTATGCAATACACAAGTAGATAACTCTAGATCA----ATTTGTTTAATAAGCACACTCTGCAAATTAGTAGAGGGTATAATAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................TACAGAATGATCCAGAACCTACCTT.....................................................................................................................................................................................................2555.60281684000
.................................................................................................TACAGAATGATCCAGAACCTACC.......................................................................................................................................................................................................2353.40172150000
.................................................................................................TACAGAATGATCCAGAACCTACCT......................................................................................................................................................................................................2451.809360000
..........................................................................................................................................................................................................AAAAGTAGTCCCAGTTCCCAAAG..............................................................................................2321.002110000
.................................................................................................................................................AATT-TACTGAACAATACCTGGATC.....................................................................................................................................................2421.002020000
.......................................................................................................................................................................................................CATAAAAGTAGTCCCAGTTCCCAAAGA.............................................................................................2711.001100000
...........................................................................................................................................................................................................................................................................................TAAGCACACTCTGCAAATTAGTAGAGG.........2731.003030000
............................................................................................................................................................................................GCATGGCGAAACATAAAAGTAGTCC..........................................................................................................2520.501100000
.................................................................................................................................................AATT-TACTGAACAATACCTGGATCTC...................................................................................................................................................2620.501010000
.................................................................................................TACAGAATGATCCAGAACCTACCC......................................................................................................................................................................................................2450.402020000
........................................................................................................................................................................................................ATAAAAGTAGTCCCAGTTCCCAAA...............................................................................................2430.331100000
...........................................................................................................................................................................................................................................................................................TAAGCACACTCTGCAAATTAGTAGAGGT........2830.331010000
.....................................................................................................................................................................................................AACATAAAAGTAGTCCCAGTTCCC..................................................................................................2430.331100000
...........................................................................................................................................................................................................................................................................................TAAGCACACTCTGCAAATTAGTAGAG..........2630.331010000
....................................................................................................................................................................................................AAACATAAAAGTAGTCCCAGTTCC...................................................................................................2430.331010000
...........................................................................................................................................................................................................................................................................................TAAGCACACTCTGCAAATTAGTAGAC..........2630.331010000
...................................................................GACTCTGCACGGGGTCTGGATCA.....................................................................................................................................................................................................................................2340.251100000
.....................................................................CTCTGCACGGGGTCTGGATCA.....................................................................................................................................................................................................................................2140.251100000
......................................................................TCTGCACGGGGTCTGGATCATAT..................................................................................................................................................................................................................................2340.251100000
..................................................................................................ACAGAATGATCCAGAACCTACC.......................................................................................................................................................................................................2250.201100000
.................................................................................................TACAGAATGATCCAGAAC............................................................................................................................................................................................................1850.201010000
................................................................................................ATACAGAATGATCCAGAACCTA.........................................................................................................................................................................................................2250.201100000
..................................................................................................ACAGAATGATCCAGAACCTACCTT.....................................................................................................................................................................................................2450.201100000
.................................................................................................TACAGAATGATCCAGAACCTACCTC.....................................................................................................................................................................................................2550.201010000
droBip1
AAA-------TC--------------------------------------------------------------------------------------------------------------------------AATAAACTACACAAACTACACAATAGTACCTGGATGACTGGACGCATACCAGACACTTGGCGAAATATAAAGGTAGTACCGGTACCCAAAGGGAA------AGTGTGGAACACACAATTTGATAATTTTAGGCCA----ATCTGTTTAATCACCGTACTTTGTAAAATAGTGGAGGGTATCTTAASizeHit CountTotal NormTotal
No Reads
droEle1
GCTATTCCATGTCCGAAATCCTTTTGAGTAAGATGACTTTTTGGAATTTATAGCTTCAAGAAAGCCTGACTCAGCAAGGGGACTAGATAAGTTATCGTATCGAATGATAA--------------------------------------------CAACAATGTATGGCTGTCTGGCCAGATACCAGAAAGCTGGAGGGAGATAAACGTGGTATCAATTCCAAAAAGAAA------CGCAGACTCATCATTTATAGATAACTATAGGCCA----ATTTGCTTGCTAAGCGTACTTTTTAAGATAACAGAGGGCCTTATTASizeHit CountTotal NormTotal
No Reads
droRho1
GAA-----------------------------------------------------------ACCCAAATTCAGCTAAAGGATTGGACAACATTTCTTACAAAATGATTCTGAGCTTTCCTAATAATCAATTGGAAAATTTATTACCCC-TTTTAAATGAAATTTTTATTAGCGGGACTATCCCTGATAGTTGGCGCAAAATAAAAGTGGTTCCAGTACCGAAAAAAAA------TGTATACGCCTCTATTGTGTCAAACAATAGACCG----ATTTGCCTTCTTAGTATTTTATTTAAGTGCTTAGAAGGTATGATTASizeHit CountTotal NormTotal
No Reads
droBia1
AAC-------TCTTTCGAAACCTTGGATTTT---------TTAGATTTTTTAGCTTCTAGAAAACCAGACTCAGCAAGAGGCCTAGATAATATAA-----------------------------------------------ATTAAAC-TCATTAACACTATATGGCTGTCCGTCCAAATTCAAGAAAGCTGGAGGGAAATAAAAGTAGTACCAATTCCAAAAAGAAA------CGCAGATTTAACCAACCTAGCCAACTACAGACCG----ATTTGTTTACTAAGCGTACTATTCAAAATATTAGAAGGGCTTATAASizeHit CountTotal NormTotal
No Reads
droTak1
GAT-------TA------------------------------------------------------------CGCAAAAGGACTGGATAAAATTTTGTATCGAATGATACAAACACTATCTCAGGTAAAGAAAGCTAAATGGTTCAATC-TCTGAAATTCTATATGGCTTTCCGGCCAAATCCCAGAATGCTGGAAAGAAATAAAATTAGTGCCAATCCCAAAGAAAAA------TGCCGACTCAACCAACTTAGCCAGTTACAGACCA----ATTTGTTTATTGAGCGTCTTATTCAAGGTACTAGAGGGGCTCATTASizeHit CountTotal NormTotal
No Reads
droEug1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCACTATACCGGATTCTTGGCGTAGAATTAAAGTTGTACCAGTCCCAAAAAAGAA------CACTGATTCTTCTATAATTACAAATAACCGACCA----ATCTGTCTTTTAAGTGTTGTGCTTAAATGTCTA--GGTCTTATTACSizeHit CountTotal NormTotal
No Reads
dm3
ACT-------C---GAAATCCATTTGAATGAATGGACTTTCTAATCTATCTAGCAAACAGAAAGCCAGACTC-GCGCAATGACAATATAAA-------------------------------ACAATATAAAAGCGGATCTATTTAATC-TGCTTAACAGAATATGGTTATCAGCTCAAACC--------------AGAGATCAAAGCTGTCCCGATACCCAAAAAAAG--------CATACCCTTCAGTGGTTTCAAGCTTTTTACCTATGTATATGTCTCATAAGCGTTCTGTTTAAGATAACAGAAAGGCTAATAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................CCATTTGAATGAATGGAC..........................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------ACAATATGGTTATCAGGTCAAATCCCAGAAACTTAGGGAGAGATCAAAGTAGTCCCGATACCAAAAAAAAAAAAAAACACAGACCCCTCAGTGGTTTCAAACTTCAGACCT----ATATGTCTCATATGCGTTCTGTTTAAGATAACAGAAGGGCTAATATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................CT----ATATGTCTCATATGCG..............................1811.00100001000000000000
droSec2
AAT-----------------------------------------------------------------------------------------------------------------------------------------------------------ACAATATGGTTATCAGGTCAAATCCCAGAAACTTAGGGAGAGATCAAAGTATTCCCGATACAAAAAAAAAA----AACACAGACCCCTCAGTGGTTTCAAACTTCAGACCT----ATGTGTCTCATATGCGTTCTGTTTAAGATAACAGAAGGGCTAATATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads

Generated: 05/18/2015 at 03:44 AM